Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:30:05 (3987929): wrapper (7.7.26015): starting
08:30:05 (3987929): wrapper: running run_atlas (--nthreads 4)
[2026-04-03 08:30:05] Arguments: --nthreads 4
[2026-04-03 08:30:05] Threads: 4
[2026-04-03 08:30:05] Checking for CVMFS
[2026-04-03 08:30:05] No cvmfs_config command found, will try listing directly
[2026-04-03 08:30:05] CVMFS is ok
[2026-04-03 08:30:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 08:30:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 08:30:05] Further information can be found at the LHC@home message board.
[2026-04-03 08:30:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 08:30:05] Checking for apptainer binary...
[2026-04-03 08:30:05] which: no apptainer in ((null))
[2026-04-03 08:30:05] apptainer is not installed, using version from CVMFS
[2026-04-03 08:30:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 08:30:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-03 08:30:05] apptainer works
[2026-04-03 08:30:05] Set ATHENA_PROC_NUMBER=4
[2026-04-03 08:30:05] Set ATHENA_CORE_NUMBER=4
[2026-04-03 08:30:05] Starting ATLAS job with PandaID=7074299861
[2026-04-03 08:30:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 11:23:43]  *** The last 200 lines of the pilot log: ***
[2026-04-03 11:23:43] 2026-04-03 09:18:58,987 | INFO     | log transfer has been attempted: DONE
[2026-04-03 11:23:43] 2026-04-03 09:18:58,987 | INFO     | job 7074299861 has finished - writing final server update
[2026-04-03 11:23:43] 2026-04-03 09:18:58,988 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3012752/.job.ad'
[2026-04-03 11:23:43] 2026-04-03 09:18:58,988 | INFO     | total number of processed events: 400 (read)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,012 | INFO     | using path: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7074299861/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,013 | INFO     | extracted standard info from prmon json
[2026-04-03 11:23:43] 2026-04-03 09:18:59,013 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 11:23:43] 2026-04-03 09:18:59,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 11:23:43] 2026-04-03 09:18:59,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 11:23:43] 2026-04-03 09:18:59,016 | INFO     | fitting pss+swap vs Time
[2026-04-03 11:23:43] 2026-04-03 09:18:59,017 | INFO     | sum of square deviations: 1418361477.5
[2026-04-03 11:23:43] 2026-04-03 09:18:59,018 | INFO     | sum of deviations: 1693866635.4999886
[2026-04-03 11:23:43] 2026-04-03 09:18:59,018 | INFO     | mean x (centered): 0.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,018 | INFO     | mean y: 2319077.873493976
[2026-04-03 11:23:43] 2026-04-03 09:18:59,018 | INFO     | intersect: 2319077.873493976
[2026-04-03 11:23:43] 2026-04-03 09:18:59,018 | INFO     | chi2: 2.121508560088984
[2026-04-03 11:23:43] 2026-04-03 09:18:59,019 | INFO     | sum of square deviations: 1294014960.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,020 | INFO     | sum of deviations: 11902395883.999998
[2026-04-03 11:23:43] 2026-04-03 09:18:59,020 | INFO     | mean x (centered): 0.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,020 | INFO     | mean y: 2331287.645962733
[2026-04-03 11:23:43] 2026-04-03 09:18:59,020 | INFO     | intersect: 2331287.645962733
[2026-04-03 11:23:43] 2026-04-03 09:18:59,020 | INFO     | chi2: 1.332836734015359
[2026-04-03 11:23:43] 2026-04-03 09:18:59,020 | INFO     | current chi2=1.332836734015359 (change=37.175048025285605 %)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,021 | INFO     | sum of square deviations: 1177156955.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,022 | INFO     | sum of deviations: 11562727723.499998
[2026-04-03 11:23:43] 2026-04-03 09:18:59,022 | INFO     | mean x (centered): 0.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,022 | INFO     | mean y: 2330844.2756410255
[2026-04-03 11:23:43] 2026-04-03 09:18:59,022 | INFO     | intersect: 2330844.2756410255
[2026-04-03 11:23:43] 2026-04-03 09:18:59,022 | INFO     | chi2: 1.334081968031644
[2026-04-03 11:23:43] 2026-04-03 09:18:59,022 | INFO     | current chi2=1.334081968031644 (change=-0.09342734818941506 %)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,022 | INFO     | right removable region: 155
[2026-04-03 11:23:43] 2026-04-03 09:18:59,023 | INFO     | sum of square deviations: 1294014960.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,024 | INFO     | sum of deviations: -18271391549.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,024 | INFO     | mean x (centered): 0.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,024 | INFO     | mean y: 2343145.8881987575
[2026-04-03 11:23:43] 2026-04-03 09:18:59,024 | INFO     | intersect: 2343145.8881987575
[2026-04-03 11:23:43] 2026-04-03 09:18:59,024 | INFO     | chi2: 0.8277113949733664
[2026-04-03 11:23:43] 2026-04-03 09:18:59,024 | INFO     | current chi2=0.8277113949733664 (change=60.98477231981336 %)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,025 | INFO     | sum of square deviations: 1177156955.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,026 | INFO     | sum of deviations: -16900923306.500004
[2026-04-03 11:23:43] 2026-04-03 09:18:59,026 | INFO     | mean x (centered): 0.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,026 | INFO     | mean y: 2341362.467948718
[2026-04-03 11:23:43] 2026-04-03 09:18:59,026 | INFO     | intersect: 2341362.467948718
[2026-04-03 11:23:43] 2026-04-03 09:18:59,026 | INFO     | chi2: 0.8279626762070099
[2026-04-03 11:23:43] 2026-04-03 09:18:59,026 | INFO     | current chi2=0.8279626762070099 (change=-0.030358556758974076 %)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,026 | INFO     | left removable region: 10
[2026-04-03 11:23:43] 2026-04-03 09:18:59,027 | INFO     | sum of square deviations: 945282840.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,027 | INFO     | sum of deviations: -6485370550.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,028 | INFO     | mean x (centered): 0.0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,028 | INFO     | mean y: 2355532.7379310345
[2026-04-03 11:23:43] 2026-04-03 09:18:59,028 | INFO     | intersect: 2355532.7379310345
[2026-04-03 11:23:43] 2026-04-03 09:18:59,028 | INFO     | chi2: 0.013286253992335106
[2026-04-03 11:23:43] 2026-04-03 09:18:59,028 | INFO     | current memory leak: -6.86 B/s (using 145 data points, chi2=0.01)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,028 | INFO     | could have reported an average CPU frequency of 2679 MHz (9 samples)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,029 | INFO     | ..............................
[2026-04-03 11:23:43] 2026-04-03 09:18:59,029 | INFO     | . Timing measurements:
[2026-04-03 11:23:43] 2026-04-03 09:18:59,029 | INFO     | . get job = 0 s
[2026-04-03 11:23:43] 2026-04-03 09:18:59,029 | INFO     | . initial setup = 8 s
[2026-04-03 11:23:43] 2026-04-03 09:18:59,029 | INFO     | . payload setup = 15 s
[2026-04-03 11:23:43] 2026-04-03 09:18:59,029 | INFO     | . stage-in = 0 s
[2026-04-03 11:23:43] 2026-04-03 09:18:59,029 | INFO     | . payload execution = 10075 s
[2026-04-03 11:23:43] 2026-04-03 09:18:59,029 | INFO     | . stage-out = 0 s
[2026-04-03 11:23:43] 2026-04-03 09:18:59,030 | INFO     | . log creation = 0 s
[2026-04-03 11:23:43] 2026-04-03 09:18:59,030 | INFO     | ..............................
[2026-04-03 11:23:43] 2026-04-03 09:18:59,123 | INFO     | 
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | job summary report
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | --------------------------------------------------
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | PanDA job id: 7074299861
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | task id: 49499687
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | errors: (none)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | pilot state: finished 
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | transexitcode: 0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | exeerrorcode: 0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | exeerrordiag: 
[2026-04-03 11:23:43] 2026-04-03 09:18:59,124 | INFO     | exitcode: 0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | exitmsg: OK
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | cpuconsumptiontime: 38511 s
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | nevents: 400
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | neventsw: 0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | pid: 3997563
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | pgrp: 3997563
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | corecount: 4
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | event service: False
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | sizes: {0: 2280036, 1: 2281610, 11: 2281638, 10094: 2310818, 10095: 2319840, 10097: 2319896, 10099: 2320282}
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | --------------------------------------------------
[2026-04-03 11:23:43] 2026-04-03 09:18:59,125 | INFO     | 
[2026-04-03 11:23:43] 2026-04-03 09:18:59,126 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/0
[2026-04-03 11:23:43] 2026-04-03 09:18:59,160 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,160 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,162 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,162 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,162 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,162 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,162 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,162 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 11:23:43] 2026-04-03 09:18:59,162 | INFO     | job 7074299861 has completed (purged errors)
[2026-04-03 11:23:43] 2026-04-03 09:18:59,162 | INFO     | overall cleanup function is called
[2026-04-03 11:23:43] 2026-04-03 09:19:00,172 | INFO     | --- collectZombieJob: --- 10, [3997563]
[2026-04-03 11:23:43] 2026-04-03 09:19:00,172 | INFO     | zombie collector waiting for pid 3997563
[2026-04-03 11:23:43] 2026-04-03 09:19:00,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 11:23:43] 2026-04-03 09:19:00,173 | INFO     | collected zombie processes
[2026-04-03 11:23:43] 2026-04-03 09:19:00,173 | INFO     | will attempt to kill all subprocesses of pid=3997563
[2026-04-03 11:23:43] 2026-04-03 09:19:01,202 | INFO     | PID=3992375 has CPU usage=24.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-03 11:23:43] 2026-04-03 09:19:01,202 | INFO     | .. there are 19 such processes running
[2026-04-03 11:23:43] 2026-04-03 09:19:01,628 | INFO     | process IDs to be killed: [3997563] (in reverse order)
[2026-04-03 11:23:43] 2026-04-03 09:19:01,940 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 11:23:43] 2026-04-03 09:19:01,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 11:23:43] 2026-04-03 09:19:01,971 | INFO     | did not find any defunct processes belonging to 3997563
[2026-04-03 11:23:43] 2026-04-03 09:19:02,001 | INFO     | did not find any defunct processes belonging to 3997563
[2026-04-03 11:23:43] 2026-04-03 09:19:02,001 | INFO     | Ready for new job
[2026-04-03 11:23:43] 2026-04-03 09:19:02,004 | INFO     | **************************************
[2026-04-03 11:23:43] 2026-04-03 09:19:02,004 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-03 11:23:43] 2026-04-03 09:19:02,004 | INFO     | **************************************
[2026-04-03 11:23:43] 2026-04-03 09:19:02,004 | INFO     | 
[2026-04-03 11:23:43] 2026-04-03 09:19:02,012 | INFO     | architecture information:
[2026-04-03 11:23:43] 2026-04-03 09:19:02,012 | INFO     | executing command: cat /etc/os-release
[2026-04-03 11:23:43] 2026-04-03 09:19:02,041 | INFO     | cat /etc/os-release:
[2026-04-03 11:23:43] NAME="CentOS Linux"
[2026-04-03 11:23:43] VERSION="7 (Core)"
[2026-04-03 11:23:43] ID="centos"
[2026-04-03 11:23:43] ID_LIKE="rhel fedora"
[2026-04-03 11:23:43] VERSION_ID="7"
[2026-04-03 11:23:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 11:23:43] ANSI_COLOR="0;31"
[2026-04-03 11:23:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 11:23:43] HOME_URL="https://www.centos.org/"
[2026-04-03 11:23:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 11:23:43] 
[2026-04-03 11:23:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 11:23:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 11:23:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 11:23:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 11:23:43] 
[2026-04-03 11:23:43] 2026-04-03 09:19:02,041 | INFO     | **************************************
[2026-04-03 11:23:43] 2026-04-03 09:19:02,544 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/0
[2026-04-03 11:23:43] 2026-04-03 09:19:02,574 | INFO     | sufficient remaining disk space (302334869504 B)
[2026-04-03 11:23:43] 2026-04-03 09:19:02,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 11:23:43] 2026-04-03 09:19:02,575 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 11:23:43] 2026-04-03 09:19:02,575 | INFO     | update_server=False
[2026-04-03 11:23:43] 2026-04-03 09:19:02,575 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-03 11:23:43] 2026-04-03 09:19:02,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 11:23:43] 2026-04-03 09:19:02,575 | INFO     | aborting loop
[2026-04-03 11:23:43] 2026-04-03 09:19:03,185 | INFO     | all data control threads have been joined
[2026-04-03 11:23:43] 2026-04-03 09:19:03,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 11:23:43] 2026-04-03 09:19:03,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 11:23:43] 2026-04-03 09:19:03,465 | INFO     | all payload control threads have been joined
[2026-04-03 11:23:43] 2026-04-03 09:19:03,581 | INFO     | [job] retrieve thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:03,581 | INFO     | [job] job monitor thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:03,640 | INFO     | [payload] failed_post thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:03,788 | INFO     | all job control threads have been joined
[2026-04-03 11:23:43] 2026-04-03 09:19:04,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 11:23:43] 2026-04-03 09:19:04,189 | INFO     | [job] validate thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:04,191 | INFO     | [data] control thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:04,201 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:04,245 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:04,246 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:04,392 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:04,470 | INFO     | [payload] control thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:04,794 | INFO     | [job] control thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:04,899 | INFO     | [payload] validate_post thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:05,053 | INFO     | [data] copytool_in thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:05,139 | INFO     | [job] queue monitor thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:05,268 | INFO     | [data] copytool_out thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:07,373 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 11:23:43] 2026-04-03 09:19:34,254 | INFO     | PID=3992375 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-03 11:23:43] 2026-04-03 09:19:34,255 | INFO     | .. there are 19 such processes running
[2026-04-03 11:23:43] 2026-04-03 09:19:34,256 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 11:23:43] 2026-04-03 09:19:34,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 11:23:43] 2026-04-03 09:19:34,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 11:23:43] 2026-04-03 09:19:44,742 | INFO     | [monitor] cgroup control has ended
[2026-04-03 11:23:43] 2026-04-03 09:19:46,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22464517666624)>', '<ExcThread(monitor, started 22464197244672)>']
[2026-04-03 11:23:43] 2026-04-03 09:19:46,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 11:23:43] 2026-04-03 09:19:46,316 | INFO     | [monitor] control thread has ended
[2026-04-03 11:23:43] 2026-04-03 09:19:51,170 | INFO     | all workflow threads have been joined
[2026-04-03 11:23:43] 2026-04-03 09:19:51,170 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 11:23:43] 2026-04-03 09:19:51,170 | INFO     | traces error code: 0
[2026-04-03 11:23:43] 2026-04-03 09:19:51,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 11:23:43] 2026-04-03 09:19:51,384 [wrapper] ==== pilot stdout END ====
[2026-04-03 11:23:43] 2026-04-03 09:19:51,389 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 11:23:43] 2026-04-03 09:19:51,393 [wrapper] pilotpid: 3992375
[2026-04-03 11:23:43] 2026-04-03 09:19:51,398 [wrapper] Pilot exit status: 0
[2026-04-03 11:23:43] 2026-04-03 09:19:51,413 [wrapper] pandaids: 7074299861
[2026-04-03 11:23:43] 2026-04-03 09:19:51,612 [wrapper] cleanup supervisor_pilot  190876 3992376
[2026-04-03 11:23:43] 2026-04-03 09:19:51,617 [wrapper] Test setup, not cleaning
[2026-04-03 11:23:43] 2026-04-03 09:19:51,621 [wrapper] apfmon messages muted
[2026-04-03 11:23:43] 2026-04-03 09:19:51,626 [wrapper] ==== wrapper stdout END ====
[2026-04-03 11:23:43] 2026-04-03 09:19:51,630 [wrapper] ==== wrapper stderr END ====
[2026-04-03 11:23:43]  *** Error codes and diagnostics ***
[2026-04-03 11:23:43]     "exeErrorCode": 0,
[2026-04-03 11:23:43]     "pilotErrorCode": 0,
[2026-04-03 11:23:43]  *** Listing of results directory ***
[2026-04-03 11:23:43] total 444764
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc    644034 Mar 30 17:50 pilot3.tar.gz
[2026-04-03 11:23:43] -rwx------. 1 boinc boinc     36322 Mar 30 17:53 runpilot2-wrapper.sh
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc      5118 Mar 30 17:55 queuedata.json
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc       100 Apr  3 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 11:23:43] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 08:29 run_atlas
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc       105 Apr  3 08:29 job.xml
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc      6624 Apr  3 08:30 init_data.xml
[2026-04-03 11:23:43] -rw-r--r--. 2 boinc boinc 266456473 Apr  3 08:30 EVNT.49474487._000004.pool.root.1
[2026-04-03 11:23:43] -rw-r--r--. 2 boinc boinc     15845 Apr  3 08:30 start_atlas.sh
[2026-04-03 11:23:43] drwxrwx--x. 2 boinc boinc      4096 Apr  3 08:30 shared
[2026-04-03 11:23:43] -rw-r--r--. 2 boinc boinc    656748 Apr  3 08:30 input.tar.gz
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc         0 Apr  3 08:30 boinc_lockfile
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc      2582 Apr  3 08:30 pandaJob.out
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc   1005175 Apr  3 08:30 agis_schedconf.cvmfs.json
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc   1511579 Apr  3 08:30 agis_ddmendpoints.agis.ALL.json
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc       444 Apr  3 08:30 workernode_map.json
[2026-04-03 11:23:43] drwx------. 5 boinc boinc      4096 Apr  3 08:30 pilot3
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc 182426734 Apr  3 11:18 HITS.49499687._000093.pool.root.1
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc       529 Apr  3 11:18 boinc_task_state.xml
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc      1027 Apr  3 11:18 memory_monitor_summary.json
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc    303321 Apr  3 11:18 log.49499687._000093.job.log.tgz.1
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc      6367 Apr  3 11:18 heartbeat_new.json
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc      6258 Apr  3 11:18 heartbeat.json
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc        95 Apr  3 11:19 pilot_heartbeat.json
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc      4830 Apr  3 11:19 pilotlog.txt
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc    940635 Apr  3 11:19 log.49499687._000093.job.log.1
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc       357 Apr  3 11:19 output.list
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc       620 Apr  3 11:19 runtime_log
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc   1259520 Apr  3 11:19 result.tar.gz
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc      9222 Apr  3 11:19 runtime_log.err
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc       665 Apr  3 11:19 krIMDmu6TR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmc6PKDm0t2sGn.diag
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc        27 Apr  3 11:23 wrapper_checkpoint.txt
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc      8192 Apr  3 11:23 boinc_mmap_file
[2026-04-03 11:23:43] -rw-r--r--. 1 boinc boinc     20922 Apr  3 11:23 stderr.txt
[2026-04-03 11:23:43] HITS file was successfully produced:
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc 182426734 Apr  3 11:18 shared/HITS.pool.root.1
[2026-04-03 11:23:43]  *** Contents of shared directory: ***
[2026-04-03 11:23:43] total 440264
[2026-04-03 11:23:43] -rw-r--r--. 2 boinc boinc 266456473 Apr  3 08:30 ATLAS.root_0
[2026-04-03 11:23:43] -rw-r--r--. 2 boinc boinc     15845 Apr  3 08:30 start_atlas.sh
[2026-04-03 11:23:43] -rw-r--r--. 2 boinc boinc    656748 Apr  3 08:30 input.tar.gz
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc 182426734 Apr  3 11:18 HITS.pool.root.1
[2026-04-03 11:23:43] -rw-------. 1 boinc boinc   1259520 Apr  3 11:19 result.tar.gz
11:23:44 (3987929): run_atlas exited; CPU time 39177.414133
11:23:44 (3987929): called boinc_finish(0)

</stderr_txt>
]]>

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