Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:49:10 (1684514): wrapper (7.7.26015): starting
22:49:10 (1684514): wrapper: running run_atlas (--nthreads 4)
[2026-04-03 22:49:10] Arguments: --nthreads 4
[2026-04-03 22:49:10] Threads: 4
[2026-04-03 22:49:10] Checking for CVMFS
[2026-04-03 22:49:10] No cvmfs_config command found, will try listing directly
[2026-04-03 22:49:10] CVMFS is ok
[2026-04-03 22:49:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 22:49:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 22:49:10] Further information can be found at the LHC@home message board.
[2026-04-03 22:49:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 22:49:10] Checking for apptainer binary...
[2026-04-03 22:49:10] which: no apptainer in ((null))
[2026-04-03 22:49:10] apptainer is not installed, using version from CVMFS
[2026-04-03 22:49:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 22:49:10] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-03 22:49:10] apptainer works
[2026-04-03 22:49:10] Set ATHENA_PROC_NUMBER=4
[2026-04-03 22:49:10] Set ATHENA_CORE_NUMBER=4
[2026-04-03 22:49:10] Starting ATLAS job with PandaID=7074314729
[2026-04-03 22:49:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:07:12 (1817507): wrapper (7.7.26015): starting
00:07:12 (1817507): wrapper: running run_atlas (--nthreads 4)
[2026-04-04 00:07:12] Arguments: --nthreads 4
[2026-04-04 00:07:12] Threads: 4
[2026-04-04 00:07:12] This job has been restarted, cleaning up previous attempt
[2026-04-04 00:07:12] Checking for CVMFS
[2026-04-04 00:07:12] No cvmfs_config command found, will try listing directly
[2026-04-04 00:07:12] CVMFS is ok
[2026-04-04 00:07:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-04 00:07:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-04 00:07:12] Further information can be found at the LHC@home message board.
[2026-04-04 00:07:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 00:07:12] Checking for apptainer binary...
[2026-04-04 00:07:12] which: no apptainer in ((null))
[2026-04-04 00:07:12] apptainer is not installed, using version from CVMFS
[2026-04-04 00:07:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 00:07:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-04 00:07:12] apptainer works
[2026-04-04 00:07:12] Set ATHENA_PROC_NUMBER=4
[2026-04-04 00:07:12] Set ATHENA_CORE_NUMBER=4
[2026-04-04 00:07:12] Starting ATLAS job with PandaID=7074314729
[2026-04-04 00:07:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 01:54:42]  *** The last 200 lines of the pilot log: ***
[2026-04-04 01:54:42] 2026-04-03 23:54:01,309 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,309 | INFO     | log transfer has been attempted: DONE
[2026-04-04 01:54:42] 2026-04-03 23:54:01,309 | INFO     | job 7074314729 has finished - writing final server update
[2026-04-04 01:54:42] 2026-04-03 23:54:01,310 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1798806/.job.ad'
[2026-04-04 01:54:42] 2026-04-03 23:54:01,310 | INFO     | total number of processed events: 400 (read)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,328 | INFO     | using path: /var/lib/boinc/var/slot60/slots/1/PanDA_Pilot-7074314729/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,329 | INFO     | extracted standard info from prmon json
[2026-04-04 01:54:42] 2026-04-03 23:54:01,329 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 01:54:42] 2026-04-03 23:54:01,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 01:54:42] 2026-04-03 23:54:01,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 01:54:42] 2026-04-03 23:54:01,331 | INFO     | fitting pss+swap vs Time
[2026-04-04 01:54:42] 2026-04-03 23:54:01,331 | INFO     | sum of square deviations: 358927660.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,332 | INFO     | sum of deviations: 3548403367.000002
[2026-04-04 01:54:42] 2026-04-03 23:54:01,332 | INFO     | mean x (centered): 0.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,332 | INFO     | mean y: 2295243.4095238093
[2026-04-04 01:54:42] 2026-04-03 23:54:01,332 | INFO     | intersect: 2295243.4095238093
[2026-04-04 01:54:42] 2026-04-03 23:54:01,332 | INFO     | chi2: 2.055871744137989
[2026-04-04 01:54:42] 2026-04-03 23:54:01,332 | INFO     | sum of square deviations: 310052325.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,333 | INFO     | sum of deviations: 9564077089.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,333 | INFO     | mean x (centered): 0.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,333 | INFO     | mean y: 2313230.82
[2026-04-04 01:54:42] 2026-04-03 23:54:01,333 | INFO     | intersect: 2313230.82
[2026-04-04 01:54:42] 2026-04-03 23:54:01,333 | INFO     | chi2: 1.2795962703606574
[2026-04-04 01:54:42] 2026-04-03 23:54:01,333 | INFO     | current chi2=1.2795962703606574 (change=37.75894464189048 %)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,333 | INFO     | sum of square deviations: 265828240.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,334 | INFO     | sum of deviations: 9006664212.999998
[2026-04-04 01:54:42] 2026-04-03 23:54:01,334 | INFO     | mean x (centered): 0.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,334 | INFO     | mean y: 2311310.442105263
[2026-04-04 01:54:42] 2026-04-03 23:54:01,334 | INFO     | intersect: 2311310.442105263
[2026-04-04 01:54:42] 2026-04-03 23:54:01,334 | INFO     | chi2: 1.2825898799478055
[2026-04-04 01:54:42] 2026-04-03 23:54:01,334 | INFO     | current chi2=1.2825898799478055 (change=-0.23394953990482947 %)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,334 | INFO     | right removable region: 94
[2026-04-04 01:54:42] 2026-04-03 23:54:01,334 | INFO     | sum of square deviations: 310052325.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,335 | INFO     | sum of deviations: -7120414344.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,335 | INFO     | mean x (centered): 0.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,335 | INFO     | mean y: 2327420.08
[2026-04-04 01:54:42] 2026-04-03 23:54:01,335 | INFO     | intersect: 2327420.08
[2026-04-04 01:54:42] 2026-04-03 23:54:01,335 | INFO     | chi2: 0.8332706541318882
[2026-04-04 01:54:42] 2026-04-03 23:54:01,335 | INFO     | current chi2=0.8332706541318882 (change=59.46874329549813 %)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,336 | INFO     | sum of square deviations: 265828240.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,336 | INFO     | sum of deviations: -4935939135.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,336 | INFO     | mean x (centered): 0.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,336 | INFO     | mean y: 2319949.431578947
[2026-04-04 01:54:42] 2026-04-03 23:54:01,336 | INFO     | intersect: 2319949.431578947
[2026-04-04 01:54:42] 2026-04-03 23:54:01,336 | INFO     | chi2: 0.8164520961817634
[2026-04-04 01:54:42] 2026-04-03 23:54:01,336 | INFO     | current chi2=0.8164520961817634 (change=2.0183787664581265 %)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,336 | INFO     | left removable region: 10
[2026-04-04 01:54:42] 2026-04-03 23:54:01,337 | INFO     | sum of square deviations: 183761585.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,337 | INFO     | sum of deviations: 757248113.5
[2026-04-04 01:54:42] 2026-04-03 23:54:01,337 | INFO     | mean x (centered): 0.0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,337 | INFO     | mean y: 2340742.630952381
[2026-04-04 01:54:42] 2026-04-03 23:54:01,337 | INFO     | intersect: 2340742.630952381
[2026-04-04 01:54:42] 2026-04-03 23:54:01,337 | INFO     | chi2: 0.00015290868025142907
[2026-04-04 01:54:42] 2026-04-03 23:54:01,337 | INFO     | current memory leak: 4.12 B/s (using 84 data points, chi2=0.00)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | could have reported an average CPU frequency of 2765 MHz (7 samples)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | ..............................
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | . Timing measurements:
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | . get job = 0 s
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | . initial setup = 1 s
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | . payload setup = 13 s
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | . stage-in = 0 s
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | . payload execution = 6358 s
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | . stage-out = 0 s
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | . log creation = 0 s
[2026-04-04 01:54:42] 2026-04-03 23:54:01,338 | INFO     | ..............................
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | 
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | job summary report
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | --------------------------------------------------
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | PanDA job id: 7074314729
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | task id: 49499802
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | errors: (none)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | pilot state: finished 
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | transexitcode: 0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | exeerrorcode: 0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,419 | INFO     | exeerrordiag: 
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | exitcode: 0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | exitmsg: OK
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | cpuconsumptiontime: 24396 s
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | nevents: 400
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | neventsw: 0
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | pid: 1824471
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | pgrp: 1824471
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | corecount: 4
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | event service: False
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | sizes: {0: 2279797, 1: 2281626, 11: 2281626, 6375: 2308819, 6377: 2317839, 6380: 2317895, 6383: 2318217}
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | --------------------------------------------------
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | 
[2026-04-04 01:54:42] 2026-04-03 23:54:01,420 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/1
[2026-04-04 01:54:42] 2026-04-03 23:54:01,443 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,443 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,445 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,445 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 01:54:42] 2026-04-03 23:54:01,445 | INFO     | job 7074314729 has completed (purged errors)
[2026-04-04 01:54:42] 2026-04-03 23:54:01,445 | INFO     | overall cleanup function is called
[2026-04-04 01:54:42] 2026-04-03 23:54:02,454 | INFO     | --- collectZombieJob: --- 10, [1824471]
[2026-04-04 01:54:42] 2026-04-03 23:54:02,454 | INFO     | zombie collector waiting for pid 1824471
[2026-04-04 01:54:42] 2026-04-03 23:54:02,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 01:54:42] 2026-04-03 23:54:02,454 | INFO     | collected zombie processes
[2026-04-04 01:54:42] 2026-04-03 23:54:02,454 | INFO     | will attempt to kill all subprocesses of pid=1824471
[2026-04-04 01:54:42] 2026-04-03 23:54:02,900 | INFO     | process IDs to be killed: [1824471] (in reverse order)
[2026-04-04 01:54:42] 2026-04-03 23:54:03,064 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 01:54:42] 2026-04-03 23:54:03,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 01:54:42] 2026-04-03 23:54:03,084 | INFO     | did not find any defunct processes belonging to 1824471
[2026-04-04 01:54:42] 2026-04-03 23:54:03,098 | INFO     | did not find any defunct processes belonging to 1824471
[2026-04-04 01:54:42] 2026-04-03 23:54:03,098 | INFO     | Ready for new job
[2026-04-04 01:54:42] 2026-04-03 23:54:03,099 | INFO     | **************************************
[2026-04-04 01:54:42] 2026-04-03 23:54:03,099 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-04 01:54:42] 2026-04-03 23:54:03,099 | INFO     | **************************************
[2026-04-04 01:54:42] 2026-04-03 23:54:03,099 | INFO     | 
[2026-04-04 01:54:42] 2026-04-03 23:54:03,105 | INFO     | architecture information:
[2026-04-04 01:54:42] 2026-04-03 23:54:03,105 | INFO     | executing command: cat /etc/os-release
[2026-04-04 01:54:42] 2026-04-03 23:54:03,123 | INFO     | cat /etc/os-release:
[2026-04-04 01:54:42] NAME="CentOS Linux"
[2026-04-04 01:54:42] VERSION="7 (Core)"
[2026-04-04 01:54:42] ID="centos"
[2026-04-04 01:54:42] ID_LIKE="rhel fedora"
[2026-04-04 01:54:42] VERSION_ID="7"
[2026-04-04 01:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 01:54:42] ANSI_COLOR="0;31"
[2026-04-04 01:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 01:54:42] HOME_URL="https://www.centos.org/"
[2026-04-04 01:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 01:54:42] 
[2026-04-04 01:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 01:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 01:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 01:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 01:54:42] 
[2026-04-04 01:54:42] 2026-04-03 23:54:03,124 | INFO     | **************************************
[2026-04-04 01:54:42] 2026-04-03 23:54:03,627 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/1
[2026-04-04 01:54:42] 2026-04-03 23:54:03,647 | INFO     | sufficient remaining disk space (325869109248 B)
[2026-04-04 01:54:42] 2026-04-03 23:54:03,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 01:54:42] 2026-04-03 23:54:03,647 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 01:54:42] 2026-04-03 23:54:03,647 | INFO     | update_server=False
[2026-04-04 01:54:42] 2026-04-03 23:54:03,647 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-04 01:54:42] 2026-04-03 23:54:03,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 01:54:42] 2026-04-03 23:54:04,101 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 01:54:42] 2026-04-03 23:54:04,101 | INFO     | aborting loop
[2026-04-04 01:54:42] 2026-04-03 23:54:04,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 01:54:42] 2026-04-03 23:54:04,277 | INFO     | all data control threads have been joined
[2026-04-04 01:54:42] 2026-04-03 23:54:04,316 | INFO     | all job control threads have been joined
[2026-04-04 01:54:42] 2026-04-03 23:54:04,653 | INFO     | [job] retrieve thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:04,661 | INFO     | [data] copytool_in thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:04,730 | INFO     | [payload] failed_post thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:04,980 | INFO     | all payload control threads have been joined
[2026-04-04 01:54:42] 2026-04-03 23:54:05,107 | INFO     | [job] job monitor thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:05,283 | INFO     | [data] control thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:05,322 | INFO     | [job] control thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:05,331 | INFO     | [job] validate thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:05,384 | INFO     | [payload] validate_post thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:05,618 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:05,654 | INFO     | [data] copytool_out thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:05,698 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:05,835 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:05,985 | INFO     | [payload] control thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:06,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 01:54:42] 2026-04-03 23:54:07,435 | INFO     | [job] queue monitor thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:08,235 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:14,576 | INFO     | job.realtimelogging is not enabled
[2026-04-04 01:54:42] 2026-04-03 23:54:15,581 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 01:54:42] 2026-04-03 23:54:34,240 | INFO     | PID=1821567 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-04 01:54:42] 2026-04-03 23:54:34,241 | INFO     | .. there are 8 such processes running
[2026-04-04 01:54:42] 2026-04-03 23:54:34,242 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 01:54:42] 2026-04-03 23:54:34,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 01:54:42] 2026-04-03 23:54:34,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 01:54:42] 2026-04-03 23:54:35,172 | INFO     | [monitor] cgroup control has ended
[2026-04-04 01:54:42] 2026-04-03 23:54:37,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23397645813568)>', '<ExcThread(monitor, started 23397403981568)>']
[2026-04-04 01:54:42] 2026-04-03 23:54:38,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 01:54:42] 2026-04-03 23:54:38,262 | INFO     | [monitor] control thread has ended
[2026-04-04 01:54:42] 2026-04-03 23:54:42,302 | INFO     | all workflow threads have been joined
[2026-04-04 01:54:42] 2026-04-03 23:54:42,302 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 01:54:42] 2026-04-03 23:54:42,302 | INFO     | traces error code: 0
[2026-04-04 01:54:42] 2026-04-03 23:54:42,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 01:54:42] 2026-04-03 23:54:42,434 [wrapper] ==== pilot stdout END ====
[2026-04-04 01:54:42] 2026-04-03 23:54:42,438 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 01:54:42] 2026-04-03 23:54:42,440 [wrapper] pilotpid: 1821567
[2026-04-04 01:54:42] 2026-04-03 23:54:42,443 [wrapper] Pilot exit status: 0
[2026-04-04 01:54:42] 2026-04-03 23:54:42,455 [wrapper] pandaids: 7074314729 7074314729
[2026-04-04 01:54:42] 2026-04-03 23:54:42,578 [wrapper] cleanup supervisor_pilot 1954011 1821568
[2026-04-04 01:54:42] 2026-04-03 23:54:42,582 [wrapper] Test setup, not cleaning
[2026-04-04 01:54:42] 2026-04-03 23:54:42,585 [wrapper] apfmon messages muted
[2026-04-04 01:54:42] 2026-04-03 23:54:42,588 [wrapper] ==== wrapper stdout END ====
[2026-04-04 01:54:42] 2026-04-03 23:54:42,591 [wrapper] ==== wrapper stderr END ====
[2026-04-04 01:54:42]  *** Error codes and diagnostics ***
[2026-04-04 01:54:42]     "exeErrorCode": 0,
[2026-04-04 01:54:42]     "pilotErrorCode": 0,
[2026-04-04 01:54:42]  *** Listing of results directory ***
[2026-04-04 01:54:42] total 691480
[2026-04-04 01:54:42] drwx------. 5 boinc boinc      4096 Mar 25 12:03 pilot3
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc    644034 Mar 30 17:50 pilot3.tar.gz
[2026-04-04 01:54:42] -rwx------. 1 boinc boinc     36322 Mar 30 17:51 runpilot2-wrapper.sh
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc      5118 Mar 30 17:53 queuedata.json
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc       100 Apr  3 22:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 01:54:42] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 22:49 run_atlas
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc       105 Apr  3 22:49 job.xml
[2026-04-04 01:54:42] -rw-r--r--. 3 boinc boinc 263097202 Apr  3 22:49 EVNT.49474746._000006.pool.root.1
[2026-04-04 01:54:42] -rw-r--r--. 3 boinc boinc 263097202 Apr  3 22:49 ATLAS.root_0
[2026-04-04 01:54:42] -rw-r--r--. 2 boinc boinc    656740 Apr  3 22:49 input.tar.gz
[2026-04-04 01:54:42] -rw-r--r--. 2 boinc boinc     15845 Apr  3 22:49 start_atlas.sh
[2026-04-04 01:54:42] drwxrwx--x. 2 boinc boinc      4096 Apr  3 22:49 shared
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc         0 Apr  3 22:49 boinc_lockfile
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc      2574 Apr  4 00:07 pandaJob.out
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc   1005173 Apr  4 00:07 agis_schedconf.cvmfs.json
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc       442 Apr  4 00:07 workernode_map.json
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc      6630 Apr  4 00:07 init_data.xml
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc       531 Apr  4 01:53 boinc_task_state.xml
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc 176085865 Apr  4 01:53 HITS.49499802._000126.pool.root.1
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc      1022 Apr  4 01:53 memory_monitor_summary.json
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc   1511579 Apr  4 01:53 agis_ddmendpoints.agis.ALL.json
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc    245717 Apr  4 01:53 log.49499802._000126.job.log.tgz.1
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc      6350 Apr  4 01:54 heartbeat_new.json
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc      6241 Apr  4 01:54 heartbeat.json
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc        96 Apr  4 01:54 pilot_heartbeat.json
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc      8192 Apr  4 01:54 boinc_mmap_file
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc        28 Apr  4 01:54 wrapper_checkpoint.txt
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc      4900 Apr  4 01:54 pilotlog.txt
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc    615932 Apr  4 01:54 log.49499802._000126.job.log.1
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc       357 Apr  4 01:54 output.list
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc       620 Apr  4 01:54 runtime_log
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc    880640 Apr  4 01:54 result.tar.gz
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc      9281 Apr  4 01:54 runtime_log.err
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc       787 Apr  4 01:54 o9JMDms4TR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmW7NKDmeUa0Un.diag
[2026-04-04 01:54:42] -rw-r--r--. 1 boinc boinc     22681 Apr  4 01:54 stderr.txt
[2026-04-04 01:54:42] HITS file was successfully produced:
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc 176085865 Apr  4 01:53 shared/HITS.pool.root.1
[2026-04-04 01:54:42]  *** Contents of shared directory: ***
[2026-04-04 01:54:42] total 430420
[2026-04-04 01:54:42] -rw-r--r--. 3 boinc boinc 263097202 Apr  3 22:49 ATLAS.root_0
[2026-04-04 01:54:42] -rw-r--r--. 2 boinc boinc    656740 Apr  3 22:49 input.tar.gz
[2026-04-04 01:54:42] -rw-r--r--. 2 boinc boinc     15845 Apr  3 22:49 start_atlas.sh
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc 176085865 Apr  4 01:53 HITS.pool.root.1
[2026-04-04 01:54:42] -rw-------. 1 boinc boinc    880640 Apr  4 01:54 result.tar.gz
01:54:44 (1817507): run_atlas exited; CPU time 24734.883495
01:54:44 (1817507): called boinc_finish(0)

</stderr_txt>
]]>

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