Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:10:24 (639268): wrapper (7.7.26015): starting
14:10:24 (639268): wrapper: running run_atlas (--nthreads 12)
[2026-03-31 14:10:24] Arguments: --nthreads 12
[2026-03-31 14:10:24] Threads: 12
[2026-03-31 14:10:24] Checking for CVMFS
[2026-03-31 14:10:24] No cvmfs_config command found, will try listing directly
[2026-03-31 14:10:24] CVMFS is ok
[2026-03-31 14:10:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 14:10:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 14:10:24] Further information can be found at the LHC@home message board.
[2026-03-31 14:10:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 14:10:24] Checking for apptainer binary...
[2026-03-31 14:10:24] which: no apptainer in ((null))
[2026-03-31 14:10:24] apptainer is not installed, using version from CVMFS
[2026-03-31 14:10:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 14:10:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot168/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-31 14:10:24] apptainer works
[2026-03-31 14:10:24] Set ATHENA_PROC_NUMBER=12
[2026-03-31 14:10:24] Set ATHENA_CORE_NUMBER=12
[2026-03-31 14:10:24] Starting ATLAS job with PandaID=7055984311
[2026-03-31 14:10:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot168/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 21:32:23]  *** The last 200 lines of the pilot log: ***
[2026-03-31 21:32:23] 2026-03-31 19:31:15,933 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_864994/.job.ad'
[2026-03-31 21:32:23] 2026-03-31 19:31:15,933 | INFO     | total number of processed events: 2050 (read)
[2026-03-31 21:32:23] 2026-03-31 19:31:15,950 | INFO     | using path: /var/lib/boinc/var/slot168/slots/0/PanDA_Pilot-7055984311/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 21:32:23] 2026-03-31 19:31:15,951 | INFO     | extracted standard info from prmon json
[2026-03-31 21:32:23] 2026-03-31 19:31:15,951 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 21:32:23] 2026-03-31 19:31:15,951 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-31 21:32:23] 2026-03-31 19:31:15,956 | INFO     | fitting pss+swap vs Time
[2026-03-31 21:32:23] 2026-03-31 19:31:15,956 | INFO     | sum of square deviations: 25173192693.963036
[2026-03-31 21:32:23] 2026-03-31 19:31:15,959 | INFO     | sum of deviations: 186562939677.4229
[2026-03-31 21:32:23] 2026-03-31 19:31:15,959 | INFO     | mean x: 1774972233.0092378
[2026-03-31 21:32:23] 2026-03-31 19:31:15,959 | INFO     | mean y: 3801975.6443418013
[2026-03-31 21:32:23] 2026-03-31 19:31:15,959 | INFO     | intersect: -13150828096.981173
[2026-03-31 21:32:23] 2026-03-31 19:31:15,959 | INFO     | chi2: 3.9996703893828545
[2026-03-31 21:32:23] 2026-03-31 19:31:15,959 | INFO     | sum of square deviations: 24311168448.96259
[2026-03-31 21:32:23] 2026-03-31 19:31:15,962 | INFO     | sum of deviations: 338836512505.76184
[2026-03-31 21:32:23] 2026-03-31 19:31:15,962 | INFO     | mean x: 1774972080.5093458
[2026-03-31 21:32:23] 2026-03-31 19:31:15,962 | INFO     | mean y: 3828866.6845794395
[2026-03-31 21:32:23] 2026-03-31 19:31:15,962 | INFO     | intersect: -24734815465.342464
[2026-03-31 21:32:23] 2026-03-31 19:31:15,962 | INFO     | chi2: 1.8859667969786196
[2026-03-31 21:32:23] 2026-03-31 19:31:15,962 | INFO     | current chi2=1.8859667969786196 (change=52.84694453860679 %)
[2026-03-31 21:32:23] 2026-03-31 19:31:15,962 | INFO     | sum of square deviations: 23469051553.9621
[2026-03-31 21:32:23] 2026-03-31 19:31:15,965 | INFO     | sum of deviations: 336765966300.96216
[2026-03-31 21:32:23] 2026-03-31 19:31:15,965 | INFO     | mean x: 1774971928.0094562
[2026-03-31 21:32:23] 2026-03-31 19:31:15,965 | INFO     | mean y: 3828484.009456265
[2026-03-31 21:32:23] 2026-03-31 19:31:15,965 | INFO     | intersect: -25465890013.936096
[2026-03-31 21:32:23] 2026-03-31 19:31:15,965 | INFO     | chi2: 1.8747132967657014
[2026-03-31 21:32:23] 2026-03-31 19:31:15,965 | INFO     | current chi2=1.8747132967657014 (change=0.596696624296177 %)
[2026-03-31 21:32:23] 2026-03-31 19:31:15,965 | INFO     | right removable region: 422
[2026-03-31 21:32:23] 2026-03-31 19:31:15,965 | INFO     | sum of square deviations: 24311192298.97897
[2026-03-31 21:32:23] 2026-03-31 19:31:15,968 | INFO     | sum of deviations: 69241298823.04887
[2026-03-31 21:32:23] 2026-03-31 19:31:15,968 | INFO     | mean x: 1774972385.5070093
[2026-03-31 21:32:23] 2026-03-31 19:31:15,968 | INFO     | mean y: 3822644.48364486
[2026-03-31 21:32:23] 2026-03-31 19:31:15,968 | INFO     | intersect: -5051519431.549064
[2026-03-31 21:32:23] 2026-03-31 19:31:15,968 | INFO     | chi2: 2.4054543989333883
[2026-03-31 21:32:23] 2026-03-31 19:31:15,968 | INFO     | current chi2=2.4054543989333883 (change=39.858684222612965 %)
[2026-03-31 21:32:23] 2026-03-31 19:31:15,969 | INFO     | sum of square deviations: 23469073268.978725
[2026-03-31 21:32:23] 2026-03-31 19:31:15,971 | INFO     | sum of deviations: 38201279382.19148
[2026-03-31 21:32:23] 2026-03-31 19:31:15,971 | INFO     | mean x: 1774972538.0070922
[2026-03-31 21:32:23] 2026-03-31 19:31:15,971 | INFO     | mean y: 3828260.936170213
[2026-03-31 21:32:23] 2026-03-31 19:31:15,971 | INFO     | intersect: -2885345122.3926153
[2026-03-31 21:32:23] 2026-03-31 19:31:15,971 | INFO     | chi2: 2.3434930770081595
[2026-03-31 21:32:23] 2026-03-31 19:31:15,971 | INFO     | current chi2=2.3434930770081595 (change=2.575867659461903 %)
[2026-03-31 21:32:23] 2026-03-31 19:31:15,971 | INFO     | left removable region: 20
[2026-03-31 21:32:23] 2026-03-31 19:31:15,972 | INFO     | sum of square deviations: 20144317160.47765
[2026-03-31 21:32:23] 2026-03-31 19:31:15,974 | INFO     | sum of deviations: 142018758693.0448
[2026-03-31 21:32:23] 2026-03-31 19:31:15,974 | INFO     | mean x: 1774972507.5074627
[2026-03-31 21:32:23] 2026-03-31 19:31:15,974 | INFO     | mean y: 3864864.1517412937
[2026-03-31 21:32:23] 2026-03-31 19:31:15,974 | INFO     | intersect: -12509807861.626265
[2026-03-31 21:32:23] 2026-03-31 19:31:15,974 | INFO     | chi2: 0.1555557312100581
[2026-03-31 21:32:23] 2026-03-31 19:31:15,974 | INFO     | current memory leak: 7.05 B/s (using 402 data points, chi2=0.16)
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | could have reported an average CPU frequency of 3638 MHz (18 samples)
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | ..............................
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | . Timing measurements:
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | . get job = 0 s
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | . initial setup = 4 s
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | . payload setup = 7 s
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | . stage-in = 0 s
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | . payload execution = 26412 s
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | . stage-out = 2 s
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | . log creation = 0 s
[2026-03-31 21:32:23] 2026-03-31 19:31:15,975 | INFO     | ..............................
[2026-03-31 21:32:23] 2026-03-31 19:31:16,023 | INFO     | 
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | job summary report
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | --------------------------------------------------
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | PanDA job id: 7055984311
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | task id: 49149270
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | errors: (none)
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | pilot state: finished 
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | transexitcode: 0
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | exeerrorcode: 0
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | exeerrordiag: 
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | exitcode: 0
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | exitmsg: OK
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | cpuconsumptiontime: 311262 s
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | nevents: 2050
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | neventsw: 0
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | pid: 656777
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | pgrp: 656777
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | corecount: 12
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | event service: False
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | sizes: {0: 2280932, 11: 2280932, 26422: 2318590, 26426: 2327612, 26429: 2327668, 26430: 2327914}
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | --------------------------------------------------
[2026-03-31 21:32:23] 2026-03-31 19:31:16,024 | INFO     | 
[2026-03-31 21:32:23] 2026-03-31 19:31:16,025 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot168/slots/0
[2026-03-31 21:32:23] 2026-03-31 19:31:16,043 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,043 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,043 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,043 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,043 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | job 7055984311 has completed (purged errors)
[2026-03-31 21:32:23] 2026-03-31 19:31:16,044 | INFO     | overall cleanup function is called
[2026-03-31 21:32:23] 2026-03-31 19:31:17,058 | INFO     | --- collectZombieJob: --- 10, [656777]
[2026-03-31 21:32:23] 2026-03-31 19:31:17,058 | INFO     | zombie collector waiting for pid 656777
[2026-03-31 21:32:23] 2026-03-31 19:31:17,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 21:32:23] 2026-03-31 19:31:17,058 | INFO     | collected zombie processes
[2026-03-31 21:32:23] 2026-03-31 19:31:17,058 | INFO     | will attempt to kill all subprocesses of pid=656777
[2026-03-31 21:32:23] 2026-03-31 19:31:17,250 | INFO     | PID=643883 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-31 21:32:23] 2026-03-31 19:31:17,250 | INFO     | .. there are 14 such processes running
[2026-03-31 21:32:23] 2026-03-31 19:31:17,535 | INFO     | process IDs to be killed: [656777] (in reverse order)
[2026-03-31 21:32:23] 2026-03-31 19:31:17,677 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 21:32:23] 2026-03-31 19:31:17,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 21:32:23] 2026-03-31 19:31:17,700 | INFO     | did not find any defunct processes belonging to 656777
[2026-03-31 21:32:23] 2026-03-31 19:31:17,722 | INFO     | did not find any defunct processes belonging to 656777
[2026-03-31 21:32:23] 2026-03-31 19:31:17,722 | INFO     | ready for new job
[2026-03-31 21:32:23] 2026-03-31 19:31:17,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-31 21:32:23] 2026-03-31 19:31:17,724 | INFO     | **************************************
[2026-03-31 21:32:23] 2026-03-31 19:31:17,724 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-31 21:32:23] 2026-03-31 19:31:17,724 | INFO     | **************************************
[2026-03-31 21:32:23] 2026-03-31 19:31:17,724 | INFO     | 
[2026-03-31 21:32:23] 2026-03-31 19:31:17,730 | INFO     | architecture information:
[2026-03-31 21:32:23] 2026-03-31 19:31:17,730 | INFO     | executing command: cat /etc/os-release
[2026-03-31 21:32:23] 2026-03-31 19:31:17,745 | INFO     | cat /etc/os-release:
[2026-03-31 21:32:23] NAME="CentOS Linux"
[2026-03-31 21:32:23] VERSION="7 (Core)"
[2026-03-31 21:32:23] ID="centos"
[2026-03-31 21:32:23] ID_LIKE="rhel fedora"
[2026-03-31 21:32:23] VERSION_ID="7"
[2026-03-31 21:32:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 21:32:23] ANSI_COLOR="0;31"
[2026-03-31 21:32:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 21:32:23] HOME_URL="https://www.centos.org/"
[2026-03-31 21:32:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 21:32:23] 
[2026-03-31 21:32:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 21:32:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 21:32:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 21:32:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 21:32:23] 
[2026-03-31 21:32:23] 2026-03-31 19:31:17,745 | INFO     | **************************************
[2026-03-31 21:32:23] 2026-03-31 19:31:18,248 | INFO     | executing command: df -mP /var/lib/boinc/var/slot168/slots/0
[2026-03-31 21:32:23] 2026-03-31 19:31:18,265 | INFO     | sufficient remaining disk space (222836031488 B)
[2026-03-31 21:32:23] 2026-03-31 19:31:18,265 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 21:32:23] 2026-03-31 19:31:18,265 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 21:32:23] 2026-03-31 19:31:18,265 | INFO     | update_server=False
[2026-03-31 21:32:23] 2026-03-31 19:31:18,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-31 21:32:23] 2026-03-31 19:31:18,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 21:32:23] 2026-03-31 19:31:18,275 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-31 21:32:23] 2026-03-31 19:31:18,276 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-31 21:32:23] 2026-03-31 19:31:18,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 21:32:23] 2026-03-31 19:31:18,276 | INFO     | will abort loop
[2026-03-31 21:32:23] 2026-03-31 19:31:18,430 | INFO     | all data control threads have been joined
[2026-03-31 21:32:23] 2026-03-31 19:31:18,643 | INFO     | all payload control threads have been joined
[2026-03-31 21:32:23] 2026-03-31 19:31:18,715 | INFO     | all job control threads have been joined
[2026-03-31 21:32:23] 2026-03-31 19:31:19,270 | INFO     | [job] retrieve thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:19,281 | INFO     | [job] job monitor thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:19,413 | INFO     | [payload] validate_post thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:19,436 | INFO     | [data] control thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:19,521 | INFO     | [job] validate thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:19,647 | INFO     | [payload] control thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:19,721 | INFO     | [job] control thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:19,727 | INFO     | [payload] failed_post thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:19,805 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:19,893 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:19,960 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:20,254 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:20,267 | INFO     | [data] copytool_out thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:20,395 | INFO     | [data] copytool_in thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:21,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 21:32:23] 2026-03-31 19:31:21,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 21:32:23] 2026-03-31 19:31:22,039 | INFO     | [job] queue monitor thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:25,227 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 21:32:23] 2026-03-31 19:31:49,779 | INFO     | PID=643883 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-31 21:32:23] 2026-03-31 19:31:49,779 | INFO     | .. there are 14 such processes running
[2026-03-31 21:32:23] 2026-03-31 19:31:49,779 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 21:32:23] 2026-03-31 19:31:49,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 21:32:23] 2026-03-31 19:31:49,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 21:32:23] 2026-03-31 19:32:16,278 | INFO     | [monitor] cgroup control has ended
[2026-03-31 21:32:23] 2026-03-31 19:32:18,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22720610350912)>', '<ExcThread(monitor, started 22720301479680)>']
[2026-03-31 21:32:23] 2026-03-31 19:32:18,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 21:32:23] 2026-03-31 19:32:18,884 | INFO     | [monitor] control thread has ended
[2026-03-31 21:32:23] 2026-03-31 19:32:23,098 | INFO     | all workflow threads have been joined
[2026-03-31 21:32:23] 2026-03-31 19:32:23,099 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 21:32:23] 2026-03-31 19:32:23,099 | INFO     | traces error code: 0
[2026-03-31 21:32:23] 2026-03-31 19:32:23,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 21:32:23] 2026-03-31 19:32:23,240 [wrapper] ==== pilot stdout END ====
[2026-03-31 21:32:23] 2026-03-31 19:32:23,242 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 21:32:23] 2026-03-31 19:32:23,244 [wrapper] pilotpid: 643883
[2026-03-31 21:32:23] 2026-03-31 19:32:23,245 [wrapper] Pilot exit status: 0
[2026-03-31 21:32:23] 2026-03-31 19:32:23,252 [wrapper] pandaids: 7055984311
[2026-03-31 21:32:23] 2026-03-31 19:32:23,360 [wrapper] cleanup supervisor_pilot 4159703 643884
[2026-03-31 21:32:23] 2026-03-31 19:32:23,363 [wrapper] Test setup, not cleaning
[2026-03-31 21:32:23] 2026-03-31 19:32:23,364 [wrapper] apfmon messages muted
[2026-03-31 21:32:23] 2026-03-31 19:32:23,366 [wrapper] ==== wrapper stdout END ====
[2026-03-31 21:32:23] 2026-03-31 19:32:23,368 [wrapper] ==== wrapper stderr END ====
[2026-03-31 21:32:23]  *** Error codes and diagnostics ***
[2026-03-31 21:32:23]     "exeErrorCode": 0,
[2026-03-31 21:32:23]     "exeErrorDiag": "",
[2026-03-31 21:32:23]     "pilotErrorCode": 0,
[2026-03-31 21:32:23]     "pilotErrorDiag": "",
[2026-03-31 21:32:23]  *** Listing of results directory ***
[2026-03-31 21:32:23] total 2164296
[2026-03-31 21:32:23] -rwx------. 1 boinc boinc      36322 Mar 22 15:08 runpilot2-wrapper.sh
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc     585013 Mar 22 16:23 pilot3.tar.gz
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc       5111 Mar 22 16:28 queuedata.json
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc        100 Mar 31 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 21:32:23] -rwxr-xr-x. 1 boinc boinc       7986 Mar 31 13:43 run_atlas
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc        105 Mar 31 13:43 job.xml
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc       6711 Mar 31 14:10 init_data.xml
[2026-03-31 21:32:23] -rw-r--r--. 2 boinc boinc  338891161 Mar 31 14:10 EVNT.49149265._000001.pool.root.1
[2026-03-31 21:32:23] -rw-r--r--. 2 boinc boinc      15845 Mar 31 14:10 start_atlas.sh
[2026-03-31 21:32:23] drwxrwx--x. 2 boinc boinc       4096 Mar 31 14:10 shared
[2026-03-31 21:32:23] -rw-r--r--. 2 boinc boinc     597722 Mar 31 14:10 input.tar.gz
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc          0 Mar 31 14:10 boinc_lockfile
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc       2936 Mar 31 14:10 pandaJob.out
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc    1003225 Mar 31 14:10 agis_schedconf.cvmfs.json
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc        444 Mar 31 14:10 workernode_map.json
[2026-03-31 21:32:23] drwx------. 5 boinc boinc       4096 Mar 31 14:10 pilot3
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc        532 Mar 31 21:24 boinc_task_state.xml
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc 1861076793 Mar 31 21:30 HITS.49149270._000004.pool.root.1
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc       1047 Mar 31 21:31 memory_monitor_summary.json
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc         95 Mar 31 21:31 pilot_heartbeat.json
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc    1511579 Mar 31 21:31 agis_ddmendpoints.agis.ALL.json
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc    2424411 Mar 31 21:31 log.49149270._000004.job.log.tgz.1
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc       7018 Mar 31 21:31 heartbeat.json
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc       8192 Mar 31 21:32 boinc_mmap_file
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc         29 Mar 31 21:32 wrapper_checkpoint.txt
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc       5016 Mar 31 21:32 pilotlog.txt
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc    3746728 Mar 31 21:32 log.49149270._000004.job.log.1
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc        353 Mar 31 21:32 output.list
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc        620 Mar 31 21:32 runtime_log
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc    6184960 Mar 31 21:32 result.tar.gz
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc       9224 Mar 31 21:32 runtime_log.err
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc        671 Mar 31 21:32 NfOKDmieYO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKI3LDmj9NlRn.diag
[2026-03-31 21:32:23] -rw-r--r--. 1 boinc boinc      21098 Mar 31 21:32 stderr.txt
[2026-03-31 21:32:23] HITS file was successfully produced:
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc 1861076793 Mar 31 21:30 shared/HITS.pool.root.1
[2026-03-31 21:32:23]  *** Contents of shared directory: ***
[2026-03-31 21:32:23] total 2155060
[2026-03-31 21:32:23] -rw-r--r--. 2 boinc boinc  338891161 Mar 31 14:10 ATLAS.root_0
[2026-03-31 21:32:23] -rw-r--r--. 2 boinc boinc      15845 Mar 31 14:10 start_atlas.sh
[2026-03-31 21:32:23] -rw-r--r--. 2 boinc boinc     597722 Mar 31 14:10 input.tar.gz
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc 1861076793 Mar 31 21:30 HITS.pool.root.1
[2026-03-31 21:32:23] -rw-------. 1 boinc boinc    6184960 Mar 31 21:32 result.tar.gz
21:32:24 (639268): run_atlas exited; CPU time 311666.266329
21:32:24 (639268): called boinc_finish(0)

</stderr_txt>
]]>

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