Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:16:33 (103948): wrapper (7.7.26015): starting
05:16:33 (103948): wrapper: running run_atlas (--nthreads 4)
[2026-03-31 05:16:33] Arguments: --nthreads 4
[2026-03-31 05:16:33] Threads: 4
[2026-03-31 05:16:33] Checking for CVMFS
[2026-03-31 05:16:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 05:16:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 05:16:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 05:16:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 05:16:34] 2.9.2.0 6139 810 74492 157906 3 8 18617053 36864001 0 130560 0 375281 99.961 34960 5376 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-31 05:16:34] CVMFS is ok
[2026-03-31 05:16:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 05:16:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 05:16:34] Further information can be found at the LHC@home message board.
[2026-03-31 05:16:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 05:16:34] Checking for apptainer binary...
[2026-03-31 05:16:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 05:16:34] Running /usr/bin/apptainer --version
[2026-03-31 05:16:34] apptainer version 1.4.1-1.1
[2026-03-31 05:16:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 05:16:34] thA373a
[2026-03-31 05:16:34] apptainer works
[2026-03-31 05:16:34] Set ATHENA_PROC_NUMBER=4
[2026-03-31 05:16:34] Set ATHENA_CORE_NUMBER=4
[2026-03-31 05:16:34] Starting ATLAS job with PandaID=7074243530
[2026-03-31 05:16:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 05:25:54]  *** The last 200 lines of the pilot log: ***
[2026-03-31 05:25:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 05:25:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 05:25:54] 
[2026-03-31 05:25:54] 2026-03-31 03:25:12,000 | INFO     | **************************************
[2026-03-31 05:25:54] 2026-03-31 03:25:12,503 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-31 05:25:54] 2026-03-31 03:25:12,519 | INFO     | sufficient remaining disk space (342007742464 B)
[2026-03-31 05:25:54] 2026-03-31 03:25:12,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 05:25:54] 2026-03-31 03:25:12,520 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 05:25:54] 2026-03-31 03:25:12,520 | INFO     | update_server=False
[2026-03-31 05:25:54] 2026-03-31 03:25:12,520 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 05:25:54] 2026-03-31 03:25:12,520 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 05:25:54] 2026-03-31 03:25:12,527 | INFO     | all data control threads have been joined
[2026-03-31 05:25:54] 2026-03-31 03:25:13,104 | INFO     | all job control threads have been joined
[2026-03-31 05:25:54] 2026-03-31 03:25:13,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 05:25:54] 2026-03-31 03:25:13,434 | INFO     | aborting loop
[2026-03-31 05:25:54] 2026-03-31 03:25:13,525 | INFO     | [job] retrieve thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:13,526 | INFO     | [job] queue monitor thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:13,533 | INFO     | [data] control thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:13,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 05:25:54] 2026-03-31 03:25:13,607 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:13,860 | INFO     | all payload control threads have been joined
[2026-03-31 05:25:54] 2026-03-31 03:25:13,932 | INFO     | [job] validate thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:13,967 | INFO     | [payload] failed_post thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:14,027 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:14,110 | INFO     | [job] control thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:14,125 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:14,250 | INFO     | [data] copytool_in thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:14,440 | INFO     | [job] job monitor thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:14,865 | INFO     | [payload] control thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:14,938 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:15,055 | INFO     | [payload] validate_post thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:15,553 | INFO     | [data] copytool_out thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:16,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 05:25:54] 2026-03-31 03:25:20,030 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 05:25:54] 2026-03-31 03:25:42,049 | INFO     | PID=107980 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-31 05:25:54] 2026-03-31 03:25:42,049 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 05:25:54] 2026-03-31 03:25:42,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 05:25:54] 2026-03-31 03:25:42,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 05:25:54] 2026-03-31 03:25:47,720 | INFO     | [monitor] cgroup control has ended
[2026-03-31 05:25:54] 2026-03-31 03:25:49,060 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701653182272)>', '<ExcThread(monitor, started 140701148886784)>']
[2026-03-31 05:25:54] 2026-03-31 03:25:49,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 05:25:54] 2026-03-31 03:25:49,085 | INFO     | [monitor] control thread has ended
[2026-03-31 05:25:54] 2026-03-31 03:25:54,086 | INFO     | all workflow threads have been joined
[2026-03-31 05:25:54] 2026-03-31 03:25:54,086 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 05:25:54] 2026-03-31 03:25:54,086 | INFO     | traces error code: 0
[2026-03-31 05:25:54] 2026-03-31 03:25:54,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 05:25:54] 2026-03-31 03:25:54,163 [wrapper] ==== pilot stdout END ====
[2026-03-31 05:25:54] 2026-03-31 03:25:54,168 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 05:25:54] 2026-03-31 03:25:54,172 [wrapper] pilotpid: 107980
[2026-03-31 05:25:54] 2026-03-31 03:25:54,176 [wrapper] Pilot exit status: 0
[2026-03-31 05:25:54] 2026-03-31 03:25:54,187 [wrapper] pandaids: 7074243530
[2026-03-31 05:25:54] 2026-03-31 03:25:54,210 [wrapper] cleanup supervisor_pilot  107986 107981
[2026-03-31 05:25:54] 2026-03-31 03:25:54,214 [wrapper] Test setup, not cleaning
[2026-03-31 05:25:54] 2026-03-31 03:25:54,218 [wrapper] apfmon messages muted
[2026-03-31 05:25:54] 2026-03-31 03:25:54,222 [wrapper] ==== wrapper stdout END ====
[2026-03-31 05:25:54] 2026-03-31 03:25:54,226 [wrapper] ==== wrapper stderr END ====
[2026-03-31 05:25:54]  *** Error codes and diagnostics ***
[2026-03-31 05:25:54]     "exeErrorCode": 65,
[2026-03-31 05:25:54]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
[2026-03-31 05:25:54]     "pilotErrorCode": 1305,
[2026-03-31 05:25:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
[2026-03-31 05:25:54]  *** Listing of results directory ***
[2026-03-31 05:25:54] total 257528
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc    644034 Mar 30 16:53 pilot3.tar.gz
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc      5118 Mar 30 16:56 queuedata.json
[2026-03-31 05:25:54] -rwx------ 1 boinc boinc     36322 Mar 30 16:56 runpilot2-wrapper.sh
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc       100 Mar 31 05:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 05:25:54] -rwxr-xr-x 1 boinc boinc      7986 Mar 31 05:16 run_atlas
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc       105 Mar 31 05:16 job.xml
[2026-03-31 05:25:54] -rw-r--r-- 2 boinc boinc 259206190 Mar 31 05:16 EVNT.49474630._000008.pool.root.1
[2026-03-31 05:25:54] -rw-r--r-- 2 boinc boinc    656757 Mar 31 05:16 input.tar.gz
[2026-03-31 05:25:54] -rw-r--r-- 2 boinc boinc     15845 Mar 31 05:16 start_atlas.sh
[2026-03-31 05:25:54] drwxrwx--x 2 boinc boinc      4096 Mar 31 05:16 shared
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc         0 Mar 31 05:16 boinc_setup_complete
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc      6377 Mar 31 05:16 init_data.xml
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc         0 Mar 31 05:16 boinc_lockfile
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc      2596 Mar 31 05:16 pandaJob.out
[2026-03-31 05:25:54] -rw------- 1 boinc boinc   1004000 Mar 31 05:16 agis_schedconf.cvmfs.json
[2026-03-31 05:25:54] -rw------- 1 boinc boinc   1511579 Mar 31 05:16 agis_ddmendpoints.agis.ALL.json
[2026-03-31 05:25:54] -rw------- 1 boinc boinc       428 Mar 31 05:16 workernode_map.json
[2026-03-31 05:25:54] drwx------ 5 boinc boinc      4096 Mar 31 05:16 pilot3
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc       526 Mar 31 05:22 boinc_task_state.xml
[2026-03-31 05:25:54] -rw------- 1 boinc boinc      1014 Mar 31 05:23 memory_monitor_summary.json
[2026-03-31 05:25:54] -rw------- 1 boinc boinc    125926 Mar 31 05:23 log.49499736._000187.job.log.tgz.1
[2026-03-31 05:25:54] -rw------- 1 boinc boinc        95 Mar 31 05:24 pilot_heartbeat.json
[2026-03-31 05:25:54] -rw------- 1 boinc boinc      8010 Mar 31 05:25 heartbeat_new.json
[2026-03-31 05:25:54] -rw------- 1 boinc boinc      7972 Mar 31 05:25 heartbeat.json
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc      8192 Mar 31 05:25 boinc_mmap_file
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc        24 Mar 31 05:25 wrapper_checkpoint.txt
[2026-03-31 05:25:54] -rw------- 1 boinc boinc      4746 Mar 31 05:25 pilotlog.txt
[2026-03-31 05:25:54] -rw------- 1 boinc boinc    100977 Mar 31 05:25 log.49499736._000187.job.log.1
[2026-03-31 05:25:54] -rw------- 1 boinc boinc       188 Mar 31 05:25 output.list
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc       620 Mar 31 05:25 runtime_log
[2026-03-31 05:25:54] -rw------- 1 boinc boinc    245760 Mar 31 05:25 result.tar.gz
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc      8748 Mar 31 05:25 runtime_log.err
[2026-03-31 05:25:54] -rw------- 1 boinc boinc       651 Mar 31 05:25 V35LDm7DTR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmjrPKDmgyyxEo.diag
[2026-03-31 05:25:54] -rw-r--r-- 1 boinc boinc      8520 Mar 31 05:25 stderr.txt
[2026-03-31 05:25:54] No HITS result produced
[2026-03-31 05:25:54]  *** Contents of shared directory: ***
[2026-03-31 05:25:54] total 254036
[2026-03-31 05:25:54] -rw-r--r-- 2 boinc boinc 259206190 Mar 31 05:16 ATLAS.root_0
[2026-03-31 05:25:54] -rw-r--r-- 2 boinc boinc    656757 Mar 31 05:16 input.tar.gz
[2026-03-31 05:25:54] -rw-r--r-- 2 boinc boinc     15845 Mar 31 05:16 start_atlas.sh
[2026-03-31 05:25:54] -rw------- 1 boinc boinc    245760 Mar 31 05:25 result.tar.gz
05:25:55 (103948): run_atlas exited; CPU time 145.514457
05:25:55 (103948): called boinc_finish(0)

</stderr_txt>
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