Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:50 (3513916): wrapper (7.7.26015): starting
17:39:50 (3513916): wrapper: running run_atlas (--nthreads 4)
[2026-04-05 17:39:50] Arguments: --nthreads 4
[2026-04-05 17:39:50] Threads: 4
[2026-04-05 17:39:50] Checking for CVMFS
[2026-04-05 17:39:50] No cvmfs_config command found, will try listing directly
[2026-04-05 17:39:50] CVMFS is ok
[2026-04-05 17:39:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 17:39:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 17:39:50] Further information can be found at the LHC@home message board.
[2026-04-05 17:39:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 17:39:50] Checking for apptainer binary...
[2026-04-05 17:39:50] which: no apptainer in ((null))
[2026-04-05 17:39:50] apptainer is not installed, using version from CVMFS
[2026-04-05 17:39:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 17:39:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-04-05 17:39:50] apptainer works
[2026-04-05 17:39:50] Set ATHENA_PROC_NUMBER=4
[2026-04-05 17:39:50] Set ATHENA_CORE_NUMBER=4
[2026-04-05 17:39:50] Starting ATLAS job with PandaID=7072205884
[2026-04-05 17:39:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 19:07:43]  *** The last 200 lines of the pilot log: ***
[2026-04-05 19:07:43]  replicas=None
[2026-04-05 19:07:43]  scope=mc23_13p6TeV
[2026-04-05 19:07:43]  status=None
[2026-04-05 19:07:43]  status_code=0
[2026-04-05 19:07:43]  storage_token=
[2026-04-05 19:07:43]  surl=/var/lib/boinc/var/slot44/slots/9/PanDA_Pilot-7072205884/log.49263200._008947.job.log.tgz.1
[2026-04-05 19:07:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/5b/log.49263200._008947.job.log.tgz.1
[2026-04-05 19:07:43]  workdir=None
[2026-04-05 19:07:43] ]
[2026-04-05 19:07:43] 2026-04-05 17:06:47,919 | INFO     | transferring file log.49263200._008947.job.log.tgz.1 from /var/lib/boinc/var/slot44/slots/9/PanDA_Pilot-7072205884/log.49263200._008947.job.log.tgz.1 to /var/lib/b
[2026-04-05 19:07:43] 2026-04-05 17:06:47,920 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot44/slots/9/PanDA_Pilot-7072205884/log.49263200._008947.job.log.tgz.1 /var/lib/boinc/var/slot44/slots/9/lo
[2026-04-05 19:07:43] 2026-04-05 17:06:47,942 | INFO     | adding to output.list: log.49263200._008947.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/5b/log.49263200._008947.job.log.tg
[2026-04-05 19:07:43] 2026-04-05 17:06:47,942 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-05 19:07:43] 2026-04-05 17:06:47,942 | INFO     | summary of transferred files:
[2026-04-05 19:07:43] 2026-04-05 17:06:47,942 | INFO     |  -- lfn=log.49263200._008947.job.log.tgz.1, status_code=0, status=transferred
[2026-04-05 19:07:43] 2026-04-05 17:06:47,942 | INFO     | stage-out finished correctly
[2026-04-05 19:07:43] 2026-04-05 17:06:48,819 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-05 19:07:43] 2026-04-05 17:06:50,071 | WARNING  | process 3524015 can no longer be monitored (due to stat problems) - aborting
[2026-04-05 19:07:43] 2026-04-05 17:06:50,072 | INFO     | using path: /var/lib/boinc/var/slot44/slots/9/PanDA_Pilot-7072205884/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 19:07:43] 2026-04-05 17:06:50,072 | INFO     | using path: /var/lib/boinc/var/slot44/slots/9/PanDA_Pilot-7072205884/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 19:07:43] 2026-04-05 17:06:50,072 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-05 19:07:43] 2026-04-05 17:06:50,072 | WARNING  | maxPSS not found in memory monitor output
[2026-04-05 19:07:43] 2026-04-05 17:06:50,073 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2760850 B
[2026-04-05 19:07:43] 2026-04-05 17:06:50,073 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16102 B
[2026-04-05 19:07:43] 2026-04-05 17:06:50,073 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/9
[2026-04-05 19:07:43] 2026-04-05 17:06:50,094 | INFO     | sufficient remaining disk space (333299318784 B)
[2026-04-05 19:07:43] 2026-04-05 17:06:50,096 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-04-05 19:07:43] 2026-04-05 17:06:50,097 | INFO     | size of work directory /var/lib/boinc/var/slot44/slots/9/PanDA_Pilot-7072205884: 3062938 B (within 5033164800 B limit)
[2026-04-05 19:07:43] 2026-04-05 17:06:50,097 | INFO     | pfn file=/var/lib/boinc/var/slot44/slots/9/PanDA_Pilot-7072205884/HITS.49263200._008947.pool.root.1 does not exist (skip from workdir size calculation)
[2026-04-05 19:07:43] 2026-04-05 17:06:50,097 | INFO     | total size of present files: 0 B (workdir size: 3062938 B)
[2026-04-05 19:07:43] 2026-04-05 17:06:50,097 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot44/slots/9/PanDA_Pilot-7072205884/HITS.49263200._008947.pool.root.1 since it does not exist
[2026-04-05 19:07:43] 2026-04-05 17:06:50,458 | INFO     | number of running child processes to parent process 3524015: 1
[2026-04-05 19:07:43] 2026-04-05 17:06:50,458 | INFO     | maximum number of monitored processes: 6
[2026-04-05 19:07:43] 2026-04-05 17:06:51,127 | INFO     | job 7072205884 has state=finished
[2026-04-05 19:07:43] 2026-04-05 17:06:51,127 | INFO     | preparing for final server update for job 7072205884 in state='finished'
[2026-04-05 19:07:43] 2026-04-05 17:06:51,128 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/9/PanDA_Pilot-7072205884/jobReport.json
[2026-04-05 19:07:43] 2026-04-05 17:06:51,130 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/9/workernode_map.json
[2026-04-05 19:07:43] 2026-04-05 17:06:51,130 | INFO     | this job has now completed (state=finished)
[2026-04-05 19:07:43] 2026-04-05 17:06:51,130 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 19:07:43] 2026-04-05 17:06:51,130 | INFO     | log transfer has been attempted: DONE
[2026-04-05 19:07:43] 2026-04-05 17:06:51,130 | INFO     | job 7072205884 has finished - writing final server update
[2026-04-05 19:07:43] 2026-04-05 17:06:51,131 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3302404/.job.ad'
[2026-04-05 19:07:43] 2026-04-05 17:06:51,131 | INFO     | total number of processed events: 400 (read)
[2026-04-05 19:07:43] 2026-04-05 17:06:51,150 | INFO     | using path: /var/lib/boinc/var/slot44/slots/9/PanDA_Pilot-7072205884/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 19:07:43] 2026-04-05 17:06:51,151 | INFO     | extracted standard info from prmon json
[2026-04-05 19:07:43] 2026-04-05 17:06:51,151 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 19:07:43] 2026-04-05 17:06:51,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 19:07:43] 2026-04-05 17:06:51,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 19:07:43] 2026-04-05 17:06:51,153 | INFO     | fitting pss+swap vs Time
[2026-04-05 19:07:43] 2026-04-05 17:06:51,153 | INFO     | sum of square deviations: 147126479.5
[2026-04-05 19:07:43] 2026-04-05 17:06:51,153 | INFO     | sum of deviations: -18136221588.000004
[2026-04-05 19:07:43] 2026-04-05 17:06:51,153 | INFO     | mean x (centered): 0.0
[2026-04-05 19:07:43] 2026-04-05 17:06:51,153 | INFO     | mean y: 2552857.0256410255
[2026-04-05 19:07:43] 2026-04-05 17:06:51,153 | INFO     | intersect: 2552857.0256410255
[2026-04-05 19:07:43] 2026-04-05 17:06:51,154 | INFO     | chi2: 0.143219537343042
[2026-04-05 19:07:43] 2026-04-05 17:06:51,154 | INFO     | current memory leak: -123.27 B/s (using 78 data points, chi2=0.14)
[2026-04-05 19:07:43] 2026-04-05 17:06:51,154 | INFO     | could have reported an average CPU frequency of 2742 MHz (6 samples)
[2026-04-05 19:07:43] 2026-04-05 17:06:51,154 | INFO     | ..............................
[2026-04-05 19:07:43] 2026-04-05 17:06:51,154 | INFO     | . Timing measurements:
[2026-04-05 19:07:43] 2026-04-05 17:06:51,154 | INFO     | . get job = 0 s
[2026-04-05 19:07:43] 2026-04-05 17:06:51,154 | INFO     | . initial setup = 5 s
[2026-04-05 19:07:43] 2026-04-05 17:06:51,154 | INFO     | . payload setup = 9 s
[2026-04-05 19:07:43] 2026-04-05 17:06:51,154 | INFO     | . stage-in = 0 s
[2026-04-05 19:07:43] 2026-04-05 17:06:51,154 | INFO     | . payload execution = 5177 s
[2026-04-05 19:07:43] 2026-04-05 17:06:51,155 | INFO     | . stage-out = 0 s
[2026-04-05 19:07:43] 2026-04-05 17:06:51,155 | INFO     | . log creation = 0 s
[2026-04-05 19:07:43] 2026-04-05 17:06:51,155 | INFO     | ..............................
[2026-04-05 19:07:43] 2026-04-05 17:06:51,236 | INFO     | 
[2026-04-05 19:07:43] 2026-04-05 17:06:51,237 | INFO     | job summary report
[2026-04-05 19:07:43] 2026-04-05 17:06:51,237 | INFO     | --------------------------------------------------
[2026-04-05 19:07:43] 2026-04-05 17:06:51,237 | INFO     | PanDA job id: 7072205884
[2026-04-05 19:07:43] 2026-04-05 17:06:51,237 | INFO     | task id: 49263200
[2026-04-05 19:07:43] 2026-04-05 17:06:51,237 | INFO     | errors: (none)
[2026-04-05 19:07:43] 2026-04-05 17:06:51,237 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 19:07:43] 2026-04-05 17:06:51,237 | INFO     | pilot state: finished 
[2026-04-05 19:07:43] 2026-04-05 17:06:51,237 | INFO     | transexitcode: 0
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | exeerrorcode: 0
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | exeerrordiag: 
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | exitcode: 0
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | exitmsg: OK
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | cpuconsumptiontime: 20048 s
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | nevents: 400
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | neventsw: 0
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | pid: 3524015
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | pgrp: 3524015
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | corecount: 4
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | event service: False
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | sizes: {0: 2279129, 1: 2281626, 11: 2281626, 5190: 2307948, 5191: 2307947, 5192: 2317023, 5193: 2317207, 5195: 2317429}
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | --------------------------------------------------
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | 
[2026-04-05 19:07:43] 2026-04-05 17:06:51,238 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/9
[2026-04-05 19:07:43] 2026-04-05 17:06:51,263 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,263 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,263 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,264 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 19:07:43] 2026-04-05 17:06:51,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,265 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 19:07:43] 2026-04-05 17:06:51,265 | INFO     | job 7072205884 has completed (purged errors)
[2026-04-05 19:07:43] 2026-04-05 17:06:51,265 | INFO     | overall cleanup function is called
[2026-04-05 19:07:43] 2026-04-05 17:06:52,273 | INFO     | --- collectZombieJob: --- 10, [3524015]
[2026-04-05 19:07:43] 2026-04-05 17:06:52,274 | INFO     | zombie collector waiting for pid 3524015
[2026-04-05 19:07:43] 2026-04-05 17:06:52,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 19:07:43] 2026-04-05 17:06:52,274 | INFO     | collected zombie processes
[2026-04-05 19:07:43] 2026-04-05 17:06:52,274 | INFO     | will attempt to kill all subprocesses of pid=3524015
[2026-04-05 19:07:43] 2026-04-05 17:06:52,648 | INFO     | process IDs to be killed: [3524015] (in reverse order)
[2026-04-05 19:07:43] 2026-04-05 17:06:52,794 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 19:07:43] 2026-04-05 17:06:52,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 19:07:43] 2026-04-05 17:06:52,813 | INFO     | did not find any defunct processes belonging to 3524015
[2026-04-05 19:07:43] 2026-04-05 17:06:52,826 | INFO     | did not find any defunct processes belonging to 3524015
[2026-04-05 19:07:43] 2026-04-05 17:06:52,826 | INFO     | Ready for new job
[2026-04-05 19:07:43] 2026-04-05 17:06:52,828 | INFO     | **************************************
[2026-04-05 19:07:43] 2026-04-05 17:06:52,828 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-05 19:07:43] 2026-04-05 17:06:52,828 | INFO     | **************************************
[2026-04-05 19:07:43] 2026-04-05 17:06:52,828 | INFO     | 
[2026-04-05 19:07:43] 2026-04-05 17:06:52,833 | INFO     | architecture information:
[2026-04-05 19:07:43] 2026-04-05 17:06:52,834 | INFO     | executing command: cat /etc/os-release
[2026-04-05 19:07:43] 2026-04-05 17:06:52,849 | INFO     | cat /etc/os-release:
[2026-04-05 19:07:43] NAME="CentOS Linux"
[2026-04-05 19:07:43] VERSION="7 (Core)"
[2026-04-05 19:07:43] ID="centos"
[2026-04-05 19:07:43] ID_LIKE="rhel fedora"
[2026-04-05 19:07:43] VERSION_ID="7"
[2026-04-05 19:07:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 19:07:43] ANSI_COLOR="0;31"
[2026-04-05 19:07:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 19:07:43] HOME_URL="https://www.centos.org/"
[2026-04-05 19:07:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 19:07:43] 
[2026-04-05 19:07:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 19:07:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 19:07:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 19:07:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 19:07:43] 
[2026-04-05 19:07:43] 2026-04-05 17:06:52,850 | INFO     | **************************************
[2026-04-05 19:07:43] 2026-04-05 17:06:53,352 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/9
[2026-04-05 19:07:43] 2026-04-05 17:06:53,370 | INFO     | sufficient remaining disk space (333302464512 B)
[2026-04-05 19:07:43] 2026-04-05 17:06:53,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 19:07:43] 2026-04-05 17:06:53,371 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 19:07:43] 2026-04-05 17:06:53,371 | INFO     | update_server=False
[2026-04-05 19:07:43] 2026-04-05 17:06:53,371 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-05 19:07:43] 2026-04-05 17:06:53,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 19:07:43] 2026-04-05 17:06:53,724 | INFO     | all data control threads have been joined
[2026-04-05 19:07:43] 2026-04-05 17:06:53,736 | INFO     | all payload control threads have been joined
[2026-04-05 19:07:43] 2026-04-05 17:06:53,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 19:07:43] 2026-04-05 17:06:53,967 | INFO     | aborting loop
[2026-04-05 19:07:43] 2026-04-05 17:06:54,376 | INFO     | [job] retrieve thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:54,468 | INFO     | all job control threads have been joined
[2026-04-05 19:07:43] 2026-04-05 17:06:54,730 | INFO     | [data] control thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:54,742 | INFO     | [payload] control thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:54,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 19:07:43] 2026-04-05 17:06:54,923 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:54,970 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:54,972 | INFO     | [job] job monitor thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:55,003 | INFO     | [payload] failed_post thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:55,192 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:55,279 | INFO     | [job] validate thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:55,294 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:55,473 | INFO     | [job] control thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:55,510 | INFO     | [data] copytool_out thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:55,735 | INFO     | [data] copytool_in thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:55,771 | INFO     | [payload] validate_post thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:56,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 19:07:43] 2026-04-05 17:06:57,242 | INFO     | [job] queue monitor thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:06:58,884 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 19:07:43] 2026-04-05 17:07:11,213 | INFO     | [monitor] cgroup control has ended
[2026-04-05 19:07:43] 2026-04-05 17:07:12,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22626044507968)>', '<ExcThread(monitor, started 22625807251200)>']
[2026-04-05 19:07:43] 2026-04-05 17:07:17,070 | INFO     | all workflow threads have been joined
[2026-04-05 19:07:43] 2026-04-05 17:07:17,070 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 19:07:43] 2026-04-05 17:07:17,070 | INFO     | traces error code: 0
[2026-04-05 19:07:43] 2026-04-05 17:07:17,070 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 19:07:43] 2026-04-05 17:07:23,442 | INFO     | PID=3518298 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 19:07:43] 2026-04-05 17:07:23,444 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 19:07:43] 2026-04-05 17:07:23,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 19:07:43] 2026-04-05 17:07:23,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 19:07:43] 2026-04-05 17:07:23,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 19:07:43] 2026-04-05 17:07:23,444 | INFO     | [monitor] control thread has ended
[2026-04-05 19:07:43] 2026-04-05 17:07:23,569 [wrapper] ==== pilot stdout END ====
[2026-04-05 19:07:43] 2026-04-05 17:07:23,573 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 19:07:43] 2026-04-05 17:07:23,576 [wrapper] pilotpid: 3518298
[2026-04-05 19:07:43] 2026-04-05 17:07:23,578 [wrapper] Pilot exit status: 0
[2026-04-05 19:07:43] 2026-04-05 17:07:23,589 [wrapper] pandaids: 7072205884
[2026-04-05 19:07:43] 2026-04-05 17:07:23,700 [wrapper] cleanup supervisor_pilot 3593355 3518299
[2026-04-05 19:07:43] 2026-04-05 17:07:23,704 [wrapper] Test setup, not cleaning
[2026-04-05 19:07:43] 2026-04-05 17:07:23,707 [wrapper] apfmon messages muted
[2026-04-05 19:07:43] 2026-04-05 17:07:23,710 [wrapper] ==== wrapper stdout END ====
[2026-04-05 19:07:43] 2026-04-05 17:07:23,713 [wrapper] ==== wrapper stderr END ====
[2026-04-05 19:07:43]  *** Error codes and diagnostics ***
[2026-04-05 19:07:43]     "exeErrorCode": 0,
[2026-04-05 19:07:43]     "pilotErrorCode": 0,
[2026-04-05 19:07:43]  *** Listing of results directory ***
[2026-04-05 19:07:43] total 416828
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc    644034 Mar 30 13:27 pilot3.tar.gz
[2026-04-05 19:07:43] -rwx------. 1 boinc boinc     36322 Mar 30 13:28 runpilot2-wrapper.sh
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc      5118 Mar 30 13:28 queuedata.json
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc       100 Apr  5 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 19:07:43] -rwxr-xr-x. 1 boinc boinc      7986 Apr  5 17:39 run_atlas
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc       105 Apr  5 17:39 job.xml
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc      6623 Apr  5 17:39 init_data.xml
[2026-04-05 19:07:43] -rw-r--r--. 2 boinc boinc 224151732 Apr  5 17:39 EVNT.49263198._000358.pool.root.1
[2026-04-05 19:07:43] -rw-r--r--. 2 boinc boinc     15845 Apr  5 17:39 start_atlas.sh
[2026-04-05 19:07:43] drwxrwx--x. 2 boinc boinc      4096 Apr  5 17:39 shared
[2026-04-05 19:07:43] -rw-r--r--. 2 boinc boinc    656749 Apr  5 17:39 input.tar.gz
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc         0 Apr  5 17:39 boinc_lockfile
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc      2573 Apr  5 17:39 pandaJob.out
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc   1005096 Apr  5 17:40 agis_schedconf.cvmfs.json
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc   1511579 Apr  5 17:40 agis_ddmendpoints.agis.ALL.json
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc       440 Apr  5 17:40 workernode_map.json
[2026-04-05 19:07:43] drwx------. 5 boinc boinc      4096 Apr  5 17:40 pilot3
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc       529 Apr  5 19:06 boinc_task_state.xml
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc 197111571 Apr  5 19:06 HITS.49263200._008947.pool.root.1
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc      1026 Apr  5 19:06 memory_monitor_summary.json
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc    257284 Apr  5 19:06 log.49263200._008947.job.log.tgz.1
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc      6369 Apr  5 19:06 heartbeat_new.json
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc      6260 Apr  5 19:06 heartbeat.json
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc        27 Apr  5 19:07 wrapper_checkpoint.txt
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc        95 Apr  5 19:07 pilot_heartbeat.json
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc       747 Apr  5 19:07 pilotlog.txt
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc    496356 Apr  5 19:07 log.49263200._008947.job.log.1
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc       357 Apr  5 19:07 output.list
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc       620 Apr  5 19:07 runtime_log
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc    768000 Apr  5 19:07 result.tar.gz
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc      9204 Apr  5 19:07 runtime_log.err
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc       661 Apr  5 19:07 4bfNDmFyPR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmTNPKDmoxGogn.diag
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc      8192 Apr  5 19:07 boinc_mmap_file
[2026-04-05 19:07:43] -rw-r--r--. 1 boinc boinc     22097 Apr  5 19:07 stderr.txt
[2026-04-05 19:07:43] HITS file was successfully produced:
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc 197111571 Apr  5 19:06 shared/HITS.pool.root.1
[2026-04-05 19:07:43]  *** Contents of shared directory: ***
[2026-04-05 19:07:43] total 412812
[2026-04-05 19:07:43] -rw-r--r--. 2 boinc boinc 224151732 Apr  5 17:39 ATLAS.root_0
[2026-04-05 19:07:43] -rw-r--r--. 2 boinc boinc     15845 Apr  5 17:39 start_atlas.sh
[2026-04-05 19:07:43] -rw-r--r--. 2 boinc boinc    656749 Apr  5 17:39 input.tar.gz
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc 197111571 Apr  5 19:06 HITS.pool.root.1
[2026-04-05 19:07:43] -rw-------. 1 boinc boinc    768000 Apr  5 19:07 result.tar.gz
19:07:44 (3513916): run_atlas exited; CPU time 20182.427226
19:07:44 (3513916): called boinc_finish(0)

</stderr_txt>
]]>

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