Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:25:55 (28157): wrapper (7.7.26015): starting
18:25:55 (28157): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 18:25:55] Arguments: --nthreads 8
[2026-03-30 18:25:55] Threads: 8
[2026-03-30 18:25:55] Checking for CVMFS
[2026-03-30 18:25:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 18:25:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 18:25:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 18:25:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 18:25:55] 2.11.0.0 10154 244473 108436 157888 2 188 2495883 4096001 6419 130560 4 19803720 99.709 13111070 371 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-30 18:25:55] CVMFS is ok
[2026-03-30 18:25:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 18:25:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 18:25:55] Further information can be found at the LHC@home message board.
[2026-03-30 18:25:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 18:25:55] Checking for apptainer binary...
[2026-03-30 18:25:55] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-30 18:25:55] apptainer is not installed, using version from CVMFS
[2026-03-30 18:25:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 18:25:56] WARNING: Environment variable TMPDIR already has value [/tmp/job_11436702/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node189
[2026-03-30 18:25:56] apptainer works
[2026-03-30 18:25:56] Set ATHENA_PROC_NUMBER=8
[2026-03-30 18:25:56] Set ATHENA_CORE_NUMBER=8
[2026-03-30 18:25:56] Starting ATLAS job with PandaID=7062625400
[2026-03-30 18:25:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11436702/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 20:37:20]  *** The last 200 lines of the pilot log: ***
[2026-03-30 20:37:20] 2026-03-30 18:36:18,149 | INFO     | time since job start (7816s) is within the limit (345600.0s)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,182 | INFO     | job 7062625400 has state=finished
[2026-03-30 20:37:20] 2026-03-30 18:36:19,182 | INFO     | preparing for final server update for job 7062625400 in state='finished'
[2026-03-30 20:37:20] 2026-03-30 18:36:19,740 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,740 | INFO     | reading metadata from: /tmp/job_11436702/atlas/pilot/slots/0/PanDA_Pilot-7062625400/jobReport.json
[2026-03-30 20:37:20] 2026-03-30 18:36:19,741 | INFO     | added worker_node to metadata from /tmp/job_11436702/atlas/pilot/slots/0/workernode_map.json
[2026-03-30 20:37:20] 2026-03-30 18:36:19,741 | INFO     | this job has now completed (state=finished)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,741 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,741 | INFO     | log transfer has been attempted: DONE
[2026-03-30 20:37:20] 2026-03-30 18:36:19,741 | INFO     | job 7062625400 has finished - writing final server update
[2026-03-30 20:37:20] 2026-03-30 18:36:19,742 | INFO     | total number of processed events: 400 (read)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,759 | INFO     | using path: /tmp/job_11436702/atlas/pilot/slots/0/PanDA_Pilot-7062625400/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,759 | INFO     | extracted standard info from prmon json
[2026-03-30 20:37:20] 2026-03-30 18:36:19,759 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 20:37:20] 2026-03-30 18:36:19,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-30 20:37:20] 2026-03-30 18:36:19,759 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 20:37:20] 2026-03-30 18:36:19,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 20:37:20] 2026-03-30 18:36:19,760 | INFO     | fitting pss+swap vs Time
[2026-03-30 20:37:20] 2026-03-30 18:36:19,761 | INFO     | sum of square deviations: 650252192.0
[2026-03-30 20:37:20] 2026-03-30 18:36:19,761 | INFO     | sum of deviations: 19515051283.5
[2026-03-30 20:37:20] 2026-03-30 18:36:19,761 | INFO     | mean x: 1774891851.5
[2026-03-30 20:37:20] 2026-03-30 18:36:19,761 | INFO     | mean y: 2549708.1796875
[2026-03-30 20:37:20] 2026-03-30 18:36:19,761 | INFO     | intersect: -53264637901.22212
[2026-03-30 20:37:20] 2026-03-30 18:36:19,761 | INFO     | chi2: 1.1555331203081085
[2026-03-30 20:37:20] 2026-03-30 18:36:19,761 | INFO     | sum of square deviations: 576985702.0
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | sum of deviations: 18774654114.99999
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | mean x: 1774891699.0
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | mean y: 2548166.325203252
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | intersect: -57751010760.35627
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | chi2: 1.1557489850635565
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | current chi2=1.1557489850635565 (change=-0.018680966530014678 %)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | right removable region: 122
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | sum of square deviations: 576985702.0
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | sum of deviations: 3382616957.0
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | mean x: 1774892004.0
[2026-03-30 20:37:20] 2026-03-30 18:36:19,762 | INFO     | mean y: 2582631.9593495936
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | intersect: -10402839493.343353
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | chi2: 0.007408776606405025
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | current chi2=0.007408776606405025 (change=99.35884342246896 %)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | sum of square deviations: 509440249.5
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | sum of deviations: 2220943815.0
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | mean x: 1774892156.5
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | mean y: 2585236.4237288134
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | intersect: -7735193160.826147
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | chi2: 0.005631375596501911
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | current chi2=0.005631375596501911 (change=23.99047918878425 %)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | left removable region: 20
[2026-03-30 20:37:20] 2026-03-30 18:36:19,763 | INFO     | sum of square deviations: 329031285.5
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | sum of deviations: 1556706641.0000002
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | mean x: 1774892278.5
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | mean y: 2586811.0588235296
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | intersect: -8394750216.640241
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | chi2: 0.005242762551835281
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | current memory leak: 4.73 B/s (using 102 data points, chi2=0.01)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | could have reported an average CPU frequency of 3205 MHz (8 samples)
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | ..............................
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | . Timing measurements:
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | . get job = 0 s
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | . initial setup = 2 s
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | . payload setup = 3 s
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | . stage-in = 0 s
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | . payload execution = 7793 s
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | . stage-out = 0 s
[2026-03-30 20:37:20] 2026-03-30 18:36:19,764 | INFO     | . log creation = 0 s
[2026-03-30 20:37:20] 2026-03-30 18:36:19,765 | INFO     | ..............................
[2026-03-30 20:37:20] 2026-03-30 18:36:20,098 | INFO     | 
[2026-03-30 20:37:20] 2026-03-30 18:36:20,098 | INFO     | job summary report
[2026-03-30 20:37:20] 2026-03-30 18:36:20,098 | INFO     | --------------------------------------------------
[2026-03-30 20:37:20] 2026-03-30 18:36:20,098 | INFO     | PanDA job id: 7062625400
[2026-03-30 20:37:20] 2026-03-30 18:36:20,098 | INFO     | task id: 49176079
[2026-03-30 20:37:20] 2026-03-30 18:36:20,098 | INFO     | errors: (none)
[2026-03-30 20:37:20] 2026-03-30 18:36:20,098 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 20:37:20] 2026-03-30 18:36:20,098 | INFO     | pilot state: finished 
[2026-03-30 20:37:20] 2026-03-30 18:36:20,098 | INFO     | transexitcode: 0
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | exeerrorcode: 0
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | exeerrordiag: 
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | exitcode: 0
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | exitmsg: OK
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | cpuconsumptiontime: 58478 s
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | nevents: 400
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | neventsw: 0
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | pid: 4589
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | pgrp: 4589
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | corecount: 8
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | event service: False
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | sizes: {0: 2279208, 1: 2280452, 11: 2280452, 7800: 2308289, 7801: 2317317, 7803: 2317373, 7807: 2317695}
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | --------------------------------------------------
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | 
[2026-03-30 20:37:20] 2026-03-30 18:36:20,099 | INFO     | executing command: ls -lF /tmp/job_11436702/atlas/pilot/slots/0
[2026-03-30 20:37:20] 2026-03-30 18:36:20,108 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,108 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,108 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,108 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | job 7062625400 has completed (purged errors)
[2026-03-30 20:37:20] 2026-03-30 18:36:20,109 | INFO     | overall cleanup function is called
[2026-03-30 20:37:20] 2026-03-30 18:36:21,115 | INFO     | --- collectZombieJob: --- 10, [4589]
[2026-03-30 20:37:20] 2026-03-30 18:36:21,115 | INFO     | zombie collector waiting for pid 4589
[2026-03-30 20:37:20] 2026-03-30 18:36:21,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 20:37:20] 2026-03-30 18:36:21,115 | INFO     | collected zombie processes
[2026-03-30 20:37:20] 2026-03-30 18:36:21,115 | INFO     | will attempt to kill all subprocesses of pid=4589
[2026-03-30 20:37:20] 2026-03-30 18:36:21,206 | INFO     | process IDs to be killed: [4589] (in reverse order)
[2026-03-30 20:37:20] 2026-03-30 18:36:21,239 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 20:37:20] 2026-03-30 18:36:21,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 20:37:20] 2026-03-30 18:36:21,242 | INFO     | did not find any defunct processes belonging to 4589
[2026-03-30 20:37:20] 2026-03-30 18:36:21,245 | INFO     | did not find any defunct processes belonging to 4589
[2026-03-30 20:37:20] 2026-03-30 18:36:21,245 | INFO     | ready for new job
[2026-03-30 20:37:20] 2026-03-30 18:36:21,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-30 20:37:20] 2026-03-30 18:36:21,246 | INFO     | **************************************
[2026-03-30 20:37:20] 2026-03-30 18:36:21,246 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-30 20:37:20] 2026-03-30 18:36:21,246 | INFO     | **************************************
[2026-03-30 20:37:20] 2026-03-30 18:36:21,246 | INFO     | 
[2026-03-30 20:37:20] 2026-03-30 18:36:21,260 | INFO     | architecture information:
[2026-03-30 20:37:20] 2026-03-30 18:36:21,260 | INFO     | executing command: cat /etc/os-release
[2026-03-30 20:37:20] 2026-03-30 18:36:21,266 | INFO     | cat /etc/os-release:
[2026-03-30 20:37:20] NAME="CentOS Linux"
[2026-03-30 20:37:20] VERSION="7 (Core)"
[2026-03-30 20:37:20] ID="centos"
[2026-03-30 20:37:20] ID_LIKE="rhel fedora"
[2026-03-30 20:37:20] VERSION_ID="7"
[2026-03-30 20:37:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 20:37:20] ANSI_COLOR="0;31"
[2026-03-30 20:37:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 20:37:20] HOME_URL="https://www.centos.org/"
[2026-03-30 20:37:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 20:37:20] 
[2026-03-30 20:37:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 20:37:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 20:37:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 20:37:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 20:37:20] 
[2026-03-30 20:37:20] 2026-03-30 18:36:21,266 | INFO     | **************************************
[2026-03-30 20:37:20] 2026-03-30 18:36:21,769 | INFO     | executing command: df -mP /tmp/job_11436702/atlas/pilot/slots/0
[2026-03-30 20:37:20] 2026-03-30 18:36:21,775 | INFO     | sufficient remaining disk space (225471102976 B)
[2026-03-30 20:37:20] 2026-03-30 18:36:21,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 20:37:20] 2026-03-30 18:36:21,776 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 20:37:20] 2026-03-30 18:36:21,776 | INFO     | update_server=False
[2026-03-30 20:37:20] 2026-03-30 18:36:21,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-30 20:37:20] 2026-03-30 18:36:21,776 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 20:37:20] 2026-03-30 18:36:21,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 20:37:20] 2026-03-30 18:36:21,776 | INFO     | aborting loop
[2026-03-30 20:37:20] 2026-03-30 18:36:21,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 20:37:20] 2026-03-30 18:36:22,121 | INFO     | all payload control threads have been joined
[2026-03-30 20:37:20] 2026-03-30 18:36:22,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 20:37:20] 2026-03-30 18:36:22,511 | INFO     | all job control threads have been joined
[2026-03-30 20:37:20] 2026-03-30 18:36:22,781 | INFO     | [job] retrieve thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:22,781 | INFO     | [job] queue monitor thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:22,781 | INFO     | [job] job monitor thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:22,825 | INFO     | all data control threads have been joined
[2026-03-30 20:37:20] 2026-03-30 18:36:22,867 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:22,981 | INFO     | [payload] failed_post thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:23,016 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:23,078 | INFO     | [data] copytool_in thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:23,126 | INFO     | [payload] control thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:23,369 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:23,516 | INFO     | [job] control thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:23,830 | INFO     | [data] control thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:23,872 | INFO     | [data] copytool_out thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:24,017 | INFO     | [payload] validate_post thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:24,139 | INFO     | [job] validate thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:26,298 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:32,305 | INFO     | job.realtimelogging is not enabled
[2026-03-30 20:37:20] 2026-03-30 18:36:33,310 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 20:37:20] 2026-03-30 18:36:51,327 | INFO     | PID=32014 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-30 20:37:20] 2026-03-30 18:36:51,328 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 20:37:20] 2026-03-30 18:36:51,328 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 20:37:20] 2026-03-30 18:36:51,328 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 20:37:20] 2026-03-30 18:37:14,893 | INFO     | [monitor] cgroup control has ended
[2026-03-30 20:37:20] 2026-03-30 18:37:15,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-30 20:37:20] 2026-03-30 18:37:16,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 20:37:20] 2026-03-30 18:37:16,451 | INFO     | [monitor] control thread has ended
[2026-03-30 20:37:20] 2026-03-30 18:37:20,664 | INFO     | all workflow threads have been joined
[2026-03-30 20:37:20] 2026-03-30 18:37:20,664 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 20:37:20] 2026-03-30 18:37:20,664 | INFO     | traces error code: 0
[2026-03-30 20:37:20] 2026-03-30 18:37:20,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 20:37:20] 2026-03-30 18:37:20,717 [wrapper] ==== pilot stdout END ====
[2026-03-30 20:37:20] 2026-03-30 18:37:20,719 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 20:37:20] 2026-03-30 18:37:20,720 [wrapper] pilotpid: 32014
[2026-03-30 20:37:20] 2026-03-30 18:37:20,721 [wrapper] Pilot exit status: 0
[2026-03-30 20:37:20] 2026-03-30 18:37:20,725 [wrapper] pandaids: 7062625400
[2026-03-30 20:37:20] 2026-03-30 18:37:20,747 [wrapper] cleanup supervisor_pilot  7034 32015
[2026-03-30 20:37:20] 2026-03-30 18:37:20,748 [wrapper] Test setup, not cleaning
[2026-03-30 20:37:20] 2026-03-30 18:37:20,750 [wrapper] apfmon messages muted
[2026-03-30 20:37:20] 2026-03-30 18:37:20,751 [wrapper] ==== wrapper stdout END ====
[2026-03-30 20:37:20] 2026-03-30 18:37:20,752 [wrapper] ==== wrapper stderr END ====
[2026-03-30 20:37:20]  *** Error codes and diagnostics ***
[2026-03-30 20:37:20]     "exeErrorCode": 0,
[2026-03-30 20:37:20]     "exeErrorDiag": "",
[2026-03-30 20:37:20]     "pilotErrorCode": 0,
[2026-03-30 20:37:20]     "pilotErrorDiag": "",
[2026-03-30 20:37:20]  *** Listing of results directory ***
[2026-03-30 20:37:20] total 482104
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user    585013 Mar 23 02:27 pilot3.tar.gz
[2026-03-30 20:37:20] -rwx------ 1 mf493845 unix-user     36322 Mar 23 02:28 runpilot2-wrapper.sh
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user      5111 Mar 23 02:30 queuedata.json
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user       100 Mar 30 17:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 20:37:20] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 30 17:23 run_atlas
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user       105 Mar 30 17:23 job.xml
[2026-03-30 20:37:20] -rw-r--r-- 2 mf493845 unix-user 245738513 Mar 30 18:25 EVNT.49132464._000004.pool.root.1
[2026-03-30 20:37:20] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 30 18:25 start_atlas.sh
[2026-03-30 20:37:20] drwxrwx--x 2 mf493845 unix-user       100 Mar 30 18:25 shared
[2026-03-30 20:37:20] -rw-r--r-- 2 mf493845 unix-user    597535 Mar 30 18:25 input.tar.gz
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user      6390 Mar 30 18:25 init_data.xml
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user         0 Mar 30 18:25 boinc_setup_complete
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user      8192 Mar 30 18:25 boinc_mmap_file
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user         0 Mar 30 18:25 boinc_lockfile
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user      2611 Mar 30 18:25 pandaJob.out
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user   1004316 Mar 30 18:25 agis_schedconf.cvmfs.json
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user   1511579 Mar 30 18:26 agis_ddmendpoints.agis.ALL.json
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user       420 Mar 30 18:26 workernode_map.json
[2026-03-30 20:37:20] drwx------ 5 mf493845 unix-user       440 Mar 30 18:26 pilot3
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user 241034821 Mar 30 20:35 HITS.49176079._000089.pool.root.1
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user      1021 Mar 30 20:36 memory_monitor_summary.json
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user    370521 Mar 30 20:36 log.49176079._000089.job.log.tgz.1
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user      6312 Mar 30 20:36 heartbeat.json
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user        95 Mar 30 20:36 pilot_heartbeat.json
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user      4828 Mar 30 20:37 pilotlog.txt
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user   1125834 Mar 30 20:37 log.49176079._000089.job.log.1
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user       357 Mar 30 20:37 output.list
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user       620 Mar 30 20:37 runtime_log
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user   1515520 Mar 30 20:37 result.tar.gz
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user      9219 Mar 30 20:37 runtime_log.err
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user       646 Mar 30 20:37 9aPLDmaGjO9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1P8LDmI7JsWn.diag
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user     21741 Mar 30 20:37 stderr.txt
[2026-03-30 20:37:20] HITS file was successfully produced:
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user 241034821 Mar 30 20:35 shared/HITS.pool.root.1
[2026-03-30 20:37:20]  *** Contents of shared directory: ***
[2026-03-30 20:37:20] total 477448
[2026-03-30 20:37:20] -rw-r--r-- 2 mf493845 unix-user 245738513 Mar 30 18:25 ATLAS.root_0
[2026-03-30 20:37:20] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 30 18:25 start_atlas.sh
[2026-03-30 20:37:20] -rw-r--r-- 2 mf493845 unix-user    597535 Mar 30 18:25 input.tar.gz
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user 241034821 Mar 30 20:35 HITS.pool.root.1
[2026-03-30 20:37:20] -rw------- 1 mf493845 unix-user   1515520 Mar 30 20:37 result.tar.gz
20:37:22 (28157): run_atlas exited; CPU time 58591.170979
20:37:22 (28157): called boinc_finish(0)

</stderr_txt>
]]>

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