Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:46:37 (2920780): wrapper (7.7.26015): starting
14:46:37 (2920780): wrapper: running run_atlas (--nthreads 12)
[2026-04-03 14:46:37] Arguments: --nthreads 12
[2026-04-03 14:46:37] Threads: 12
[2026-04-03 14:46:37] Checking for CVMFS
[2026-04-03 14:46:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-03 14:46:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-03 14:46:37] Running cvmfs_config stat atlas.cern.ch
[2026-04-03 14:46:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-03 14:46:37] 2.13.3.0 2686551 4015 54516 158044 3 188 3082036 4096001 903 130560 0 965337 99.976 152844 5368 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-03 14:46:37] CVMFS is ok
[2026-04-03 14:46:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 14:46:37] Checking for apptainer binary...
[2026-04-03 14:46:37] apptainer is not installed, using version from CVMFS
[2026-04-03 14:46:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 14:46:37] g6400
[2026-04-03 14:46:37] apptainer works
[2026-04-03 14:46:37] Set ATHENA_PROC_NUMBER=12
[2026-04-03 14:46:37] Set ATHENA_CORE_NUMBER=12
[2026-04-03 14:46:37] Starting ATLAS job with PandaID=7074242831
[2026-04-03 14:46:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 19:29:20]  *** The last 200 lines of the pilot log: ***
[2026-04-03 19:29:20] 2026-04-03 19:28:10,892 | INFO     | job 7074242831 has finished - writing final server update
[2026-04-03 19:29:20] 2026-04-03 19:28:10,892 | INFO     | total number of processed events: 400 (read)
[2026-04-03 19:29:20] 2026-04-03 19:28:10,910 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-7074242831/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 19:29:20] 2026-04-03 19:28:10,910 | INFO     | extracted standard info from prmon json
[2026-04-03 19:29:20] 2026-04-03 19:28:10,910 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 19:29:20] 2026-04-03 19:28:10,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 19:29:20] 2026-04-03 19:28:10,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 19:29:20] 2026-04-03 19:28:10,920 | INFO     | fitting pss+swap vs Time
[2026-04-03 19:29:20] 2026-04-03 19:28:10,920 | INFO     | sum of square deviations: 6519285025.0
[2026-04-03 19:29:20] 2026-04-03 19:28:10,930 | INFO     | sum of deviations: 95575916147.50002
[2026-04-03 19:29:20] 2026-04-03 19:28:10,930 | INFO     | mean x (centered): 0.0
[2026-04-03 19:29:20] 2026-04-03 19:28:10,930 | INFO     | mean y: 2630011.1195652173
[2026-04-03 19:29:20] 2026-04-03 19:28:10,930 | INFO     | intersect: 2630011.1195652173
[2026-04-03 19:29:20] 2026-04-03 19:28:10,930 | INFO     | chi2: 5.529580328740725
[2026-04-03 19:29:20] 2026-04-03 19:28:10,931 | INFO     | sum of square deviations: 6171352920.0
[2026-04-03 19:29:20] 2026-04-03 19:28:10,932 | INFO     | sum of deviations: 133471995804.99998
[2026-04-03 19:29:20] 2026-04-03 19:28:10,932 | INFO     | mean x (centered): 0.0
[2026-04-03 19:29:20] 2026-04-03 19:28:10,932 | INFO     | mean y: 2646430.963099631
[2026-04-03 19:29:20] 2026-04-03 19:28:10,932 | INFO     | intersect: 2646430.963099631
[2026-04-03 19:29:20] 2026-04-03 19:28:10,933 | INFO     | chi2: 3.9604036756214067
[2026-04-03 19:29:20] 2026-04-03 19:28:10,933 | INFO     | current chi2=3.9604036756214067 (change=28.377861606663256 %)
[2026-04-03 19:29:20] 2026-04-03 19:28:10,933 | INFO     | sum of square deviations: 5836025702.5
[2026-04-03 19:29:20] 2026-04-03 19:28:10,949 | INFO     | monitor loop #1265: job 0:7074242831 is in state 'finished'
[2026-04-03 19:29:20] 2026-04-03 19:28:10,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-03 19:29:20] 2026-04-03 19:28:10,954 | INFO     | sum of deviations: 130946065501.5
[2026-04-03 19:29:20] 2026-04-03 19:28:10,954 | INFO     | mean x (centered): 0.0
[2026-04-03 19:29:20] 2026-04-03 19:28:10,955 | INFO     | mean y: 2645282.2443609023
[2026-04-03 19:29:20] 2026-04-03 19:28:10,955 | INFO     | intersect: 2645282.2443609023
[2026-04-03 19:29:20] 2026-04-03 19:28:10,955 | INFO     | chi2: 3.9615356414625933
[2026-04-03 19:29:20] 2026-04-03 19:28:10,955 | INFO     | current chi2=3.9615356414625933 (change=-0.02858208238100795 %)
[2026-04-03 19:29:20] 2026-04-03 19:28:10,955 | INFO     | right removable region: 265
[2026-04-03 19:29:20] 2026-04-03 19:28:10,961 | INFO     | sum of square deviations: 6171352920.0
[2026-04-03 19:29:20] 2026-04-03 19:28:10,963 | INFO     | sum of deviations: 6526608197.000011
[2026-04-03 19:29:20] 2026-04-03 19:28:10,963 | INFO     | mean x (centered): 0.0
[2026-04-03 19:29:20] 2026-04-03 19:28:10,963 | INFO     | mean y: 2668958.664206642
[2026-04-03 19:29:20] 2026-04-03 19:28:10,963 | INFO     | intersect: 2668958.664206642
[2026-04-03 19:29:20] 2026-04-03 19:28:10,963 | INFO     | chi2: 2.0347899807783643
[2026-04-03 19:29:20] 2026-04-03 19:28:10,963 | INFO     | current chi2=2.0347899807783643 (change=63.20172852535889 %)
[2026-04-03 19:29:20] 2026-04-03 19:28:10,964 | INFO     | sum of square deviations: 5836025702.5
[2026-04-03 19:29:20] 2026-04-03 19:28:10,965 | INFO     | sum of deviations: -19474150295.500004
[2026-04-03 19:29:20] 2026-04-03 19:28:10,965 | INFO     | mean x (centered): 0.0
[2026-04-03 19:29:20] 2026-04-03 19:28:10,965 | INFO     | mean y: 2680763.1240601502
[2026-04-03 19:29:20] 2026-04-03 19:28:10,981 | INFO     | intersect: 2680763.1240601502
[2026-04-03 19:29:20] 2026-04-03 19:28:10,982 | INFO     | chi2: 1.7580265179370587
[2026-04-03 19:29:20] 2026-04-03 19:28:10,984 | INFO     | current chi2=1.7580265179370587 (change=13.601573894885988 %)
[2026-04-03 19:29:20] 2026-04-03 19:28:10,984 | INFO     | left removable region: 10
[2026-04-03 19:29:20] 2026-04-03 19:28:10,984 | INFO     | sum of square deviations: 5141528960.0
[2026-04-03 19:29:20] 2026-04-03 19:28:10,990 | INFO     | sum of deviations: 18729302017.999977
[2026-04-03 19:29:20] 2026-04-03 19:28:10,990 | INFO     | mean x (centered): 0.0
[2026-04-03 19:29:20] 2026-04-03 19:28:10,990 | INFO     | mean y: 2698590.5450980393
[2026-04-03 19:29:20] 2026-04-03 19:28:10,991 | INFO     | intersect: 2698590.5450980393
[2026-04-03 19:29:20] 2026-04-03 19:28:10,993 | INFO     | chi2: 0.11978416381714996
[2026-04-03 19:29:20] 2026-04-03 19:28:10,993 | INFO     | current memory leak: 3.64 B/s (using 255 data points, chi2=0.12)
[2026-04-03 19:29:20] 2026-04-03 19:28:10,995 | INFO     | could have reported an average CPU frequency of 3999 MHz (13 samples)
[2026-04-03 19:29:20] 2026-04-03 19:28:10,995 | INFO     | ..............................
[2026-04-03 19:29:20] 2026-04-03 19:28:10,995 | INFO     | . Timing measurements:
[2026-04-03 19:29:20] 2026-04-03 19:28:10,995 | INFO     | . get job = 0 s
[2026-04-03 19:29:20] 2026-04-03 19:28:10,997 | INFO     | . initial setup = 2 s
[2026-04-03 19:29:20] 2026-04-03 19:28:10,997 | INFO     | . payload setup = 54 s
[2026-04-03 19:29:20] 2026-04-03 19:28:10,997 | INFO     | . stage-in = 0 s
[2026-04-03 19:29:20] 2026-04-03 19:28:10,997 | INFO     | . payload execution = 16807 s
[2026-04-03 19:29:20] 2026-04-03 19:28:10,997 | INFO     | . stage-out = 5 s
[2026-04-03 19:29:20] 2026-04-03 19:28:10,997 | INFO     | . log creation = 0 s
[2026-04-03 19:29:20] 2026-04-03 19:28:10,997 | INFO     | ..............................
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | 
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | job summary report
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | --------------------------------------------------
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | PanDA job id: 7074242831
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | task id: 49499726
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | errors: (none)
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | pilot state: finished 
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | transexitcode: 0
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | exeerrorcode: 0
[2026-04-03 19:29:20] 2026-04-03 19:28:11,208 | INFO     | exeerrordiag: 
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | exitcode: 0
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | exitmsg: OK
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | cpuconsumptiontime: 34167 s
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | nevents: 400
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | neventsw: 0
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | pid: 2928845
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | pgrp: 2928845
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | corecount: 12
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | event service: False
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | sizes: {0: 2281657, 10: 2281657, 16866: 2313509, 16872: 2322553, 16875: 2322609, 16877: 2322803}
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | --------------------------------------------------
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | 
[2026-04-03 19:29:20] 2026-04-03 19:28:11,209 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-04-03 19:29:20] 2026-04-03 19:28:11,285 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,287 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 19:29:20] 2026-04-03 19:28:11,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,287 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 19:29:20] 2026-04-03 19:28:11,287 | INFO     | job 7074242831 has completed (purged errors)
[2026-04-03 19:29:20] 2026-04-03 19:28:11,287 | INFO     | overall cleanup function is called
[2026-04-03 19:29:20] 2026-04-03 19:28:12,293 | INFO     | --- collectZombieJob: --- 10, [2928845]
[2026-04-03 19:29:20] 2026-04-03 19:28:12,294 | INFO     | zombie collector waiting for pid 2928845
[2026-04-03 19:29:20] 2026-04-03 19:28:12,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 19:29:20] 2026-04-03 19:28:12,294 | INFO     | collected zombie processes
[2026-04-03 19:29:20] 2026-04-03 19:28:12,294 | INFO     | will attempt to kill all subprocesses of pid=2928845
[2026-04-03 19:29:20] 2026-04-03 19:28:12,452 | INFO     | process IDs to be killed: [2928845] (in reverse order)
[2026-04-03 19:29:20] 2026-04-03 19:28:12,539 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 19:29:20] 2026-04-03 19:28:12,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 19:29:20] 2026-04-03 19:28:12,544 | INFO     | did not find any defunct processes belonging to 2928845
[2026-04-03 19:29:20] 2026-04-03 19:28:12,547 | INFO     | did not find any defunct processes belonging to 2928845
[2026-04-03 19:29:20] 2026-04-03 19:28:12,549 | INFO     | Ready for new job
[2026-04-03 19:29:20] 2026-04-03 19:28:12,553 | INFO     | **************************************
[2026-04-03 19:29:20] 2026-04-03 19:28:12,553 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-03 19:29:20] 2026-04-03 19:28:12,553 | INFO     | **************************************
[2026-04-03 19:29:20] 2026-04-03 19:28:12,553 | INFO     | 
[2026-04-03 19:29:20] 2026-04-03 19:28:12,569 | INFO     | architecture information:
[2026-04-03 19:29:20] 2026-04-03 19:28:12,570 | INFO     | executing command: cat /etc/os-release
[2026-04-03 19:29:20] 2026-04-03 19:28:12,658 | INFO     | cat /etc/os-release:
[2026-04-03 19:29:20] NAME="CentOS Linux"
[2026-04-03 19:29:20] VERSION="7 (Core)"
[2026-04-03 19:29:20] ID="centos"
[2026-04-03 19:29:20] ID_LIKE="rhel fedora"
[2026-04-03 19:29:20] VERSION_ID="7"
[2026-04-03 19:29:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 19:29:20] ANSI_COLOR="0;31"
[2026-04-03 19:29:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 19:29:20] HOME_URL="https://www.centos.org/"
[2026-04-03 19:29:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 19:29:20] 
[2026-04-03 19:29:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 19:29:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 19:29:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 19:29:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 19:29:20] 
[2026-04-03 19:29:20] 2026-04-03 19:28:12,658 | INFO     | **************************************
[2026-04-03 19:29:20] 2026-04-03 19:28:13,161 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-04-03 19:29:20] 2026-04-03 19:28:13,232 | INFO     | sufficient remaining disk space (192606633984 B)
[2026-04-03 19:29:20] 2026-04-03 19:28:13,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 19:29:20] 2026-04-03 19:28:13,234 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 19:29:20] 2026-04-03 19:28:13,234 | INFO     | update_server=False
[2026-04-03 19:29:20] 2026-04-03 19:28:13,234 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-03 19:29:20] 2026-04-03 19:28:13,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 19:29:20] 2026-04-03 19:28:13,461 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-03 19:29:20] 2026-04-03 19:28:13,461 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-03 19:29:20] 2026-04-03 19:28:13,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 19:29:20] 2026-04-03 19:28:13,462 | INFO     | will abort loop
[2026-04-03 19:29:20] 2026-04-03 19:28:14,037 | INFO     | all payload control threads have been joined
[2026-04-03 19:29:20] 2026-04-03 19:28:14,139 | INFO     | all data control threads have been joined
[2026-04-03 19:29:20] 2026-04-03 19:28:14,238 | INFO     | [job] retrieve thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:14,457 | INFO     | [payload] failed_post thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:14,465 | INFO     | [job] job monitor thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:14,493 | INFO     | [data] copytool_in thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:14,621 | INFO     | [payload] validate_post thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:14,885 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:14,917 | INFO     | all job control threads have been joined
[2026-04-03 19:29:20] 2026-04-03 19:28:15,041 | INFO     | [payload] control thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:15,125 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:15,144 | INFO     | [data] control thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:15,241 | INFO     | [data] copytool_out thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:15,321 | INFO     | [job] validate thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:15,357 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:15,538 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:15,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 19:29:20] 2026-04-03 19:28:15,921 | INFO     | [job] control thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:16,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 19:29:20] 2026-04-03 19:28:17,222 | INFO     | [job] queue monitor thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:19,577 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 19:29:20] 2026-04-03 19:28:42,668 | INFO     | PID=2924460 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-03 19:29:20] 2026-04-03 19:28:42,668 | INFO     | .. there are 2 such processes running
[2026-04-03 19:29:20] 2026-04-03 19:28:42,669 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 19:29:20] 2026-04-03 19:28:42,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 19:29:20] 2026-04-03 19:28:42,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 19:29:20] 2026-04-03 19:29:11,965 | INFO     | [monitor] cgroup control has ended
[2026-04-03 19:29:20] 2026-04-03 19:29:13,858 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066260330304)>', '<ExcThread(monitor, started 140065812485888)>']
[2026-04-03 19:29:20] 2026-04-03 19:29:14,814 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 19:29:20] 2026-04-03 19:29:14,814 | INFO     | [monitor] control thread has ended
[2026-04-03 19:29:20] 2026-04-03 19:29:18,883 | INFO     | all workflow threads have been joined
[2026-04-03 19:29:20] 2026-04-03 19:29:18,883 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 19:29:20] 2026-04-03 19:29:18,884 | INFO     | traces error code: 0
[2026-04-03 19:29:20] 2026-04-03 19:29:18,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 19:29:20] 2026-04-03 19:29:19,178 [wrapper] ==== pilot stdout END ====
[2026-04-03 19:29:20] 2026-04-03 19:29:19,202 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 19:29:20] 2026-04-03 19:29:19,215 [wrapper] pilotpid: 2924460
[2026-04-03 19:29:20] 2026-04-03 19:29:19,269 [wrapper] Pilot exit status: 0
[2026-04-03 19:29:20] 2026-04-03 19:29:19,431 [wrapper] pandaids: 7074242831
[2026-04-03 19:29:20] 2026-04-03 19:29:19,521 [wrapper] cleanup supervisor_pilot 2947855 2924461
[2026-04-03 19:29:20] 2026-04-03 19:29:19,548 [wrapper] Test setup, not cleaning
[2026-04-03 19:29:20] 2026-04-03 19:29:19,593 [wrapper] apfmon messages muted
[2026-04-03 19:29:20] 2026-04-03 19:29:19,629 [wrapper] ==== wrapper stdout END ====
[2026-04-03 19:29:20] 2026-04-03 19:29:19,689 [wrapper] ==== wrapper stderr END ====
[2026-04-03 19:29:20]  *** Error codes and diagnostics ***
[2026-04-03 19:29:20]     "exeErrorCode": 0,
[2026-04-03 19:29:20]     "pilotErrorCode": 0,
[2026-04-03 19:29:20]  *** Listing of results directory ***
[2026-04-03 19:29:20] total 443720
[2026-04-03 19:29:20] -rw-r--r-- 1 boinc boinc    644034 Mar 30 12:39 pilot3.tar.gz
[2026-04-03 19:29:20] -rw-r--r-- 1 boinc boinc      5118 Mar 30 13:42 queuedata.json
[2026-04-03 19:29:20] -rwx------ 1 boinc boinc     36322 Mar 30 13:42 runpilot2-wrapper.sh
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc       100 Apr  3 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 19:29:20] -rwxr-xr-x 1 boinc boinc      7986 Apr  3 14:46 run_atlas
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc       105 Apr  3 14:46 job.xml
[2026-04-03 19:29:20] -rw-r--r-- 2 boinc boinc     15845 Apr  3 14:46 start_atlas.sh
[2026-04-03 19:29:20] drwxrwx--x 2 boinc boinc      4096 Apr  3 14:46 shared
[2026-04-03 19:29:20] -rw-r--r-- 2 boinc boinc    656753 Apr  3 14:46 input.tar.gz
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc      9478 Apr  3 14:46 init_data.xml
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc         0 Apr  3 14:46 boinc_setup_complete
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc         0 Apr  3 14:46 boinc_lockfile
[2026-04-03 19:29:20] -rw-r--r-- 2 boinc boinc 264629532 Apr  3 14:46 EVNT.49474571._000001.pool.root.1
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc      2619 Apr  3 14:46 pandaJob.out
[2026-04-03 19:29:20] -rw------- 1 boinc boinc   1005111 Apr  3 14:46 agis_schedconf.cvmfs.json
[2026-04-03 19:29:20] -rw------- 1 boinc boinc       418 Apr  3 14:46 workernode_map.json
[2026-04-03 19:29:20] drwx------ 5 boinc boinc      4096 Apr  3 14:46 pilot3
[2026-04-03 19:29:20] -rw------- 1 boinc boinc 181421303 Apr  3 19:26 HITS.49499726._000018.pool.root.1
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc       530 Apr  3 19:26 boinc_task_state.xml
[2026-04-03 19:29:20] -rw------- 1 boinc boinc      1037 Apr  3 19:27 memory_monitor_summary.json
[2026-04-03 19:29:20] -rw------- 1 boinc boinc   1511579 Apr  3 19:28 agis_ddmendpoints.agis.ALL.json
[2026-04-03 19:29:20] -rw------- 1 boinc boinc    485916 Apr  3 19:28 log.49499726._000018.job.log.tgz.1
[2026-04-03 19:29:20] -rw------- 1 boinc boinc      6323 Apr  3 19:28 heartbeat_new.json
[2026-04-03 19:29:20] -rw------- 1 boinc boinc      6214 Apr  3 19:28 heartbeat.json
[2026-04-03 19:29:20] -rw------- 1 boinc boinc        95 Apr  3 19:28 pilot_heartbeat.json
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc      8192 Apr  3 19:29 boinc_mmap_file
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc        28 Apr  3 19:29 wrapper_checkpoint.txt
[2026-04-03 19:29:20] -rw------- 1 boinc boinc      5028 Apr  3 19:29 pilotlog.txt
[2026-04-03 19:29:20] -rw------- 1 boinc boinc   1634377 Apr  3 19:29 log.49499726._000018.job.log.1
[2026-04-03 19:29:20] -rw------- 1 boinc boinc       357 Apr  3 19:29 output.list
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc       620 Apr  3 19:29 runtime_log
[2026-04-03 19:29:20] -rw------- 1 boinc boinc   2140160 Apr  3 19:29 result.tar.gz
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc      9152 Apr  3 19:29 runtime_log.err
[2026-04-03 19:29:20] -rw------- 1 boinc boinc       652 Apr  3 19:29 UfwMDm03RR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmHgPKDmZerWXn.diag
[2026-04-03 19:29:20] -rw-rw-r-- 1 boinc boinc     20808 Apr  3 19:29 stderr.txt
[2026-04-03 19:29:20] HITS file was successfully produced:
[2026-04-03 19:29:20] -rw------- 1 boinc boinc 181421303 Apr  3 19:26 shared/HITS.pool.root.1
[2026-04-03 19:29:20]  *** Contents of shared directory: ***
[2026-04-03 19:29:20] total 438360
[2026-04-03 19:29:20] -rw-r--r-- 2 boinc boinc     15845 Apr  3 14:46 start_atlas.sh
[2026-04-03 19:29:20] -rw-r--r-- 2 boinc boinc    656753 Apr  3 14:46 input.tar.gz
[2026-04-03 19:29:20] -rw-r--r-- 2 boinc boinc 264629532 Apr  3 14:46 ATLAS.root_0
[2026-04-03 19:29:20] -rw------- 1 boinc boinc 181421303 Apr  3 19:26 HITS.pool.root.1
[2026-04-03 19:29:20] -rw------- 1 boinc boinc   2140160 Apr  3 19:29 result.tar.gz
19:29:21 (2920780): run_atlas exited; CPU time 34214.807568
19:29:21 (2920780): called boinc_finish(0)

</stderr_txt>
]]>

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