Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:59:35 (663810): wrapper (7.7.26015): starting
11:59:35 (663810): wrapper: running run_atlas (--nthreads 12)
[2026-03-31 11:59:35] Arguments: --nthreads 12
[2026-03-31 11:59:35] Threads: 12
[2026-03-31 11:59:35] Checking for CVMFS
[2026-03-31 11:59:35] No cvmfs_config command found, will try listing directly
[2026-03-31 11:59:35] CVMFS is ok
[2026-03-31 11:59:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 11:59:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 11:59:35] Further information can be found at the LHC@home message board.
[2026-03-31 11:59:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 11:59:35] Checking for apptainer binary...
[2026-03-31 11:59:35] which: no apptainer in ((null))
[2026-03-31 11:59:35] apptainer is not installed, using version from CVMFS
[2026-03-31 11:59:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 11:59:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-31 11:59:35] apptainer works
[2026-03-31 11:59:36] Set ATHENA_PROC_NUMBER=12
[2026-03-31 11:59:36] Set ATHENA_CORE_NUMBER=12
[2026-03-31 11:59:36] Starting ATLAS job with PandaID=7072186294
[2026-03-31 11:59:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 12:28:56]  *** The last 200 lines of the pilot log: ***
[2026-03-31 12:28:56]  filetype=log
[2026-03-31 12:28:56]  guid=00eed232-a58b-4322-8a4c-68f376b629f3
[2026-03-31 12:28:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 12:28:56]  is_altstaged=None
[2026-03-31 12:28:56]  is_tar=False
[2026-03-31 12:28:56]  lfn=log.49263191._005772.job.log.tgz.1
[2026-03-31 12:28:56]  mtime=0
[2026-03-31 12:28:56]  protocol_id=None
[2026-03-31 12:28:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 12:28:56]  replicas=None
[2026-03-31 12:28:56]  scope=mc23_13p6TeV
[2026-03-31 12:28:56]  status=None
[2026-03-31 12:28:56]  status_code=0
[2026-03-31 12:28:56]  storage_token=
[2026-03-31 12:28:56]  surl=/var/lib/boinc/var/slot180/slots/2/PanDA_Pilot-7072186294/log.49263191._005772.job.log.tgz.1
[2026-03-31 12:28:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/0b/log.49263191._005772.job.log.tgz.1
[2026-03-31 12:28:56]  workdir=None
[2026-03-31 12:28:56] ]
[2026-03-31 12:28:56] 2026-03-31 10:28:10,504 | INFO     | transferring file log.49263191._005772.job.log.tgz.1 from /var/lib/boinc/var/slot180/slots/2/PanDA_Pilot-7072186294/log.49263191._005772.job.log.tgz.1 to /var/lib/
[2026-03-31 12:28:56] 2026-03-31 10:28:10,505 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot180/slots/2/PanDA_Pilot-7072186294/log.49263191._005772.job.log.tgz.1 /var/lib/boinc/var/slot180/slots/2/
[2026-03-31 12:28:56] 2026-03-31 10:28:10,520 | INFO     | adding to output.list: log.49263191._005772.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/0b/log.49263191._005772.job.log.tg
[2026-03-31 12:28:56] 2026-03-31 10:28:10,520 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 12:28:56] 2026-03-31 10:28:10,521 | INFO     | summary of transferred files:
[2026-03-31 12:28:56] 2026-03-31 10:28:10,521 | INFO     |  -- lfn=log.49263191._005772.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 12:28:56] 2026-03-31 10:28:10,521 | INFO     | stage-out finished correctly
[2026-03-31 12:28:56] 2026-03-31 10:28:11,392 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 12:28:56] 2026-03-31 10:28:11,749 | INFO     | job 7072186294 has state=finished
[2026-03-31 12:28:56] 2026-03-31 10:28:11,749 | INFO     | preparing for final server update for job 7072186294 in state='finished'
[2026-03-31 12:28:56] 2026-03-31 10:28:11,749 | INFO     | reading metadata from: /var/lib/boinc/var/slot180/slots/2/PanDA_Pilot-7072186294/jobReport.json
[2026-03-31 12:28:56] 2026-03-31 10:28:11,751 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot180/slots/2/workernode_map.json
[2026-03-31 12:28:56] 2026-03-31 10:28:11,751 | INFO     | this job has now completed (state=finished)
[2026-03-31 12:28:56] 2026-03-31 10:28:11,751 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 12:28:56] 2026-03-31 10:28:11,751 | INFO     | log transfer has been attempted: DONE
[2026-03-31 12:28:56] 2026-03-31 10:28:11,751 | INFO     | job 7072186294 has finished - writing final server update
[2026-03-31 12:28:56] 2026-03-31 10:28:11,751 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3127804/.job.ad'
[2026-03-31 12:28:56] 2026-03-31 10:28:11,751 | INFO     | total number of processed events: 400 (read)
[2026-03-31 12:28:56] 2026-03-31 10:28:11,771 | INFO     | using path: /var/lib/boinc/var/slot180/slots/2/PanDA_Pilot-7072186294/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 12:28:56] 2026-03-31 10:28:11,771 | INFO     | extracted standard info from prmon json
[2026-03-31 12:28:56] 2026-03-31 10:28:11,771 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 12:28:56] 2026-03-31 10:28:11,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 12:28:56] 2026-03-31 10:28:11,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 12:28:56] 2026-03-31 10:28:11,772 | INFO     | fitting pss+swap vs Time
[2026-03-31 12:28:56] 2026-03-31 10:28:11,772 | INFO     | sum of square deviations: 2865170.0
[2026-03-31 12:28:56] 2026-03-31 10:28:11,772 | INFO     | sum of deviations: 67856216.99999999
[2026-03-31 12:28:56] 2026-03-31 10:28:11,772 | INFO     | mean x (centered): 0.0
[2026-03-31 12:28:56] 2026-03-31 10:28:11,772 | INFO     | mean y: 2702427.095238095
[2026-03-31 12:28:56] 2026-03-31 10:28:11,772 | INFO     | intersect: 2702427.095238095
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | chi2: 0.00012209064690720092
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | current memory leak: 23.68 B/s (using 21 data points, chi2=0.00)
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | could have reported an average CPU frequency of 3647 MHz (4 samples)
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | ..............................
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | . Timing measurements:
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | . get job = 0 s
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | . initial setup = 4 s
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | . payload setup = 5 s
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | . stage-in = 0 s
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | . payload execution = 1683 s
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | . stage-out = 0 s
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | . log creation = 0 s
[2026-03-31 12:28:56] 2026-03-31 10:28:11,773 | INFO     | ..............................
[2026-03-31 12:28:56] 2026-03-31 10:28:11,822 | INFO     | 
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | job summary report
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | --------------------------------------------------
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | PanDA job id: 7072186294
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | task id: 49263191
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | errors: (none)
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | pilot state: finished 
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | transexitcode: 0
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | exeerrorcode: 0
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | exeerrordiag: 
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | exitcode: 0
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | exitmsg: OK
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | cpuconsumptiontime: 17632 s
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | nevents: 400
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | neventsw: 0
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | pid: 674450
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | pgrp: 674450
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | corecount: 12
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | event service: False
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | sizes: {0: 2281601, 11: 2281601, 1692: 2315460, 1693: 2315460, 1694: 2315654}
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | --------------------------------------------------
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | 
[2026-03-31 12:28:56] 2026-03-31 10:28:11,823 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/2
[2026-03-31 12:28:56] 2026-03-31 10:28:11,840 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,840 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,840 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | job 7072186294 has completed (purged errors)
[2026-03-31 12:28:56] 2026-03-31 10:28:11,841 | INFO     | overall cleanup function is called
[2026-03-31 12:28:56] 2026-03-31 10:28:12,534 | WARNING  | process 674450 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 12:28:56] 2026-03-31 10:28:12,803 | INFO     | using path: /var/lib/boinc/var/slot180/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 12:28:56] 2026-03-31 10:28:12,848 | INFO     | --- collectZombieJob: --- 10, [674450]
[2026-03-31 12:28:56] 2026-03-31 10:28:12,848 | INFO     | zombie collector waiting for pid 674450
[2026-03-31 12:28:56] 2026-03-31 10:28:12,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 12:28:56] 2026-03-31 10:28:12,848 | INFO     | collected zombie processes
[2026-03-31 12:28:56] 2026-03-31 10:28:12,849 | INFO     | will attempt to kill all subprocesses of pid=674450
[2026-03-31 12:28:56] 2026-03-31 10:28:13,979 | INFO     | number of running child processes to parent process 674450: 1
[2026-03-31 12:28:56] 2026-03-31 10:28:13,980 | INFO     | maximum number of monitored processes: 6
[2026-03-31 12:28:56] 2026-03-31 10:28:13,980 | INFO     | aborting job monitoring since job object (job id=7072186294) has expired
[2026-03-31 12:28:56] 2026-03-31 10:28:14,010 | INFO     | process IDs to be killed: [674450] (in reverse order)
[2026-03-31 12:28:56] 2026-03-31 10:28:14,159 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 12:28:56] 2026-03-31 10:28:14,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 12:28:56] 2026-03-31 10:28:14,184 | INFO     | did not find any defunct processes belonging to 674450
[2026-03-31 12:28:56] 2026-03-31 10:28:14,208 | INFO     | did not find any defunct processes belonging to 674450
[2026-03-31 12:28:56] 2026-03-31 10:28:14,209 | INFO     | Ready for new job
[2026-03-31 12:28:56] 2026-03-31 10:28:14,210 | INFO     | **************************************
[2026-03-31 12:28:56] 2026-03-31 10:28:14,210 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 12:28:56] 2026-03-31 10:28:14,210 | INFO     | **************************************
[2026-03-31 12:28:56] 2026-03-31 10:28:14,210 | INFO     | 
[2026-03-31 12:28:56] 2026-03-31 10:28:14,215 | INFO     | architecture information:
[2026-03-31 12:28:56] 2026-03-31 10:28:14,216 | INFO     | executing command: cat /etc/os-release
[2026-03-31 12:28:56] 2026-03-31 10:28:14,230 | INFO     | cat /etc/os-release:
[2026-03-31 12:28:56] NAME="CentOS Linux"
[2026-03-31 12:28:56] VERSION="7 (Core)"
[2026-03-31 12:28:56] ID="centos"
[2026-03-31 12:28:56] ID_LIKE="rhel fedora"
[2026-03-31 12:28:56] VERSION_ID="7"
[2026-03-31 12:28:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 12:28:56] ANSI_COLOR="0;31"
[2026-03-31 12:28:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 12:28:56] HOME_URL="https://www.centos.org/"
[2026-03-31 12:28:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 12:28:56] 
[2026-03-31 12:28:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 12:28:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 12:28:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 12:28:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 12:28:56] 
[2026-03-31 12:28:56] 2026-03-31 10:28:14,230 | INFO     | **************************************
[2026-03-31 12:28:56] 2026-03-31 10:28:14,733 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/2
[2026-03-31 12:28:56] 2026-03-31 10:28:14,749 | INFO     | sufficient remaining disk space (171437981696 B)
[2026-03-31 12:28:56] 2026-03-31 10:28:14,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 12:28:56] 2026-03-31 10:28:14,749 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 12:28:56] 2026-03-31 10:28:14,749 | INFO     | update_server=False
[2026-03-31 12:28:56] 2026-03-31 10:28:14,749 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 12:28:56] 2026-03-31 10:28:14,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 12:28:56] 2026-03-31 10:28:14,750 | INFO     | will abort loop
[2026-03-31 12:28:56] 2026-03-31 10:28:15,029 | INFO     | all data control threads have been joined
[2026-03-31 12:28:56] 2026-03-31 10:28:15,277 | INFO     | all payload control threads have been joined
[2026-03-31 12:28:56] 2026-03-31 10:28:15,754 | INFO     | [job] retrieve thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:15,755 | INFO     | [job] job monitor thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:15,840 | INFO     | [payload] validate_post thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:16,035 | INFO     | [data] control thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:16,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 12:28:56] 2026-03-31 10:28:16,283 | INFO     | [payload] control thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:16,289 | INFO     | all job control threads have been joined
[2026-03-31 12:28:56] 2026-03-31 10:28:16,767 | INFO     | [job] validate thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:16,780 | INFO     | [payload] failed_post thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:16,783 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:16,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 12:28:56] 2026-03-31 10:28:16,885 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:16,999 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:17,064 | INFO     | [data] copytool_in thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:17,293 | INFO     | [job] control thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:17,446 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 12:28:56] 2026-03-31 10:28:17,837 | INFO     | [job] queue monitor thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:18,063 | INFO     | [data] copytool_out thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:21,451 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:24,881 | INFO     | job.realtimelogging is not enabled
[2026-03-31 12:28:56] 2026-03-31 10:28:25,887 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 12:28:56] 2026-03-31 10:28:44,149 | INFO     | PID=668385 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-31 12:28:56] 2026-03-31 10:28:44,150 | INFO     | .. there are 15 such processes running
[2026-03-31 12:28:56] 2026-03-31 10:28:44,151 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 12:28:56] 2026-03-31 10:28:44,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 12:28:56] 2026-03-31 10:28:44,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 12:28:56] 2026-03-31 10:28:49,032 | INFO     | [monitor] cgroup control has ended
[2026-03-31 12:28:56] 2026-03-31 10:28:50,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22688888825664)>', '<ExcThread(monitor, started 22688648406784)>']
[2026-03-31 12:28:56] 2026-03-31 10:28:51,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 12:28:56] 2026-03-31 10:28:51,185 | INFO     | [monitor] control thread has ended
[2026-03-31 12:28:56] 2026-03-31 10:28:55,917 | INFO     | all workflow threads have been joined
[2026-03-31 12:28:56] 2026-03-31 10:28:55,918 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 12:28:56] 2026-03-31 10:28:55,918 | INFO     | traces error code: 0
[2026-03-31 12:28:56] 2026-03-31 10:28:55,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 12:28:56] 2026-03-31 10:28:56,056 [wrapper] ==== pilot stdout END ====
[2026-03-31 12:28:56] 2026-03-31 10:28:56,059 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 12:28:56] 2026-03-31 10:28:56,061 [wrapper] pilotpid: 668385
[2026-03-31 12:28:56] 2026-03-31 10:28:56,063 [wrapper] Pilot exit status: 0
[2026-03-31 12:28:56] 2026-03-31 10:28:56,071 [wrapper] pandaids: 7072186294
[2026-03-31 12:28:56] 2026-03-31 10:28:56,178 [wrapper] cleanup supervisor_pilot  820820 668386
[2026-03-31 12:28:56] 2026-03-31 10:28:56,182 [wrapper] Test setup, not cleaning
[2026-03-31 12:28:56] 2026-03-31 10:28:56,184 [wrapper] apfmon messages muted
[2026-03-31 12:28:56] 2026-03-31 10:28:56,187 [wrapper] ==== wrapper stdout END ====
[2026-03-31 12:28:56] 2026-03-31 10:28:56,189 [wrapper] ==== wrapper stderr END ====
[2026-03-31 12:28:56]  *** Error codes and diagnostics ***
[2026-03-31 12:28:56]     "exeErrorCode": 0,
[2026-03-31 12:28:56]     "pilotErrorCode": 0,
[2026-03-31 12:28:56]  *** Listing of results directory ***
[2026-03-31 12:28:56] total 408724
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc    644034 Mar 30 12:21 pilot3.tar.gz
[2026-03-31 12:28:56] -rwx------. 1 boinc boinc     36322 Mar 30 12:21 runpilot2-wrapper.sh
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc      5118 Mar 30 12:21 queuedata.json
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc       100 Mar 31 11:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 12:28:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 11:59 run_atlas
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc       105 Mar 31 11:59 job.xml
[2026-03-31 12:28:56] -rw-r--r--. 2 boinc boinc 226143901 Mar 31 11:59 EVNT.49263189._000156.pool.root.1
[2026-03-31 12:28:56] -rw-r--r--. 2 boinc boinc     15845 Mar 31 11:59 start_atlas.sh
[2026-03-31 12:28:56] drwxrwx--x. 2 boinc boinc      4096 Mar 31 11:59 shared
[2026-03-31 12:28:56] -rw-r--r--. 2 boinc boinc    656751 Mar 31 11:59 input.tar.gz
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc      6713 Mar 31 11:59 init_data.xml
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc         0 Mar 31 11:59 boinc_lockfile
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc      2575 Mar 31 11:59 pandaJob.out
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc   1003225 Mar 31 11:59 agis_schedconf.cvmfs.json
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc   1511579 Mar 31 11:59 agis_ddmendpoints.agis.ALL.json
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc       445 Mar 31 11:59 workernode_map.json
[2026-03-31 12:28:56] drwx------. 5 boinc boinc      4096 Mar 31 11:59 pilot3
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc 187218573 Mar 31 12:27 HITS.49263191._005772.pool.root.1
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc       529 Mar 31 12:27 boinc_task_state.xml
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc      1031 Mar 31 12:28 memory_monitor_summary.json
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc    345399 Mar 31 12:28 log.49263191._005772.job.log.tgz.1
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc      6386 Mar 31 12:28 heartbeat_new.json
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc      6277 Mar 31 12:28 heartbeat.json
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc      8192 Mar 31 12:28 boinc_mmap_file
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc        27 Mar 31 12:28 wrapper_checkpoint.txt
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc        95 Mar 31 12:28 pilot_heartbeat.json
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc      4903 Mar 31 12:28 pilotlog.txt
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc    205822 Mar 31 12:28 log.49263191._005772.job.log.1
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc       357 Mar 31 12:28 output.list
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc       620 Mar 31 12:28 runtime_log
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc    573440 Mar 31 12:28 result.tar.gz
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc      9223 Mar 31 12:28 runtime_log.err
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc       658 Mar 31 12:28 B8ALDmCvOR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmz9MKDmMt3DTn.diag
[2026-03-31 12:28:56] -rw-r--r--. 1 boinc boinc     21083 Mar 31 12:28 stderr.txt
[2026-03-31 12:28:56] HITS file was successfully produced:
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc 187218573 Mar 31 12:27 shared/HITS.pool.root.1
[2026-03-31 12:28:56]  *** Contents of shared directory: ***
[2026-03-31 12:28:56] total 404904
[2026-03-31 12:28:56] -rw-r--r--. 2 boinc boinc 226143901 Mar 31 11:59 ATLAS.root_0
[2026-03-31 12:28:56] -rw-r--r--. 2 boinc boinc     15845 Mar 31 11:59 start_atlas.sh
[2026-03-31 12:28:56] -rw-r--r--. 2 boinc boinc    656751 Mar 31 11:59 input.tar.gz
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc 187218573 Mar 31 12:27 HITS.pool.root.1
[2026-03-31 12:28:56] -rw-------. 1 boinc boinc    573440 Mar 31 12:28 result.tar.gz
12:28:57 (663810): run_atlas exited; CPU time 17684.975392
12:28:57 (663810): called boinc_finish(0)

</stderr_txt>
]]>

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