Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:59:44 (19369): wrapper (7.7.26015): starting
00:59:44 (19369): wrapper: running run_atlas (--nthreads 8)
[2026-03-31 00:59:44] Arguments: --nthreads 8
[2026-03-31 00:59:44] Threads: 8
[2026-03-31 00:59:44] Checking for CVMFS
[2026-03-31 00:59:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-31 00:59:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-31 00:59:46] Running cvmfs_config stat atlas.cern.ch
[2026-03-31 00:59:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-31 00:59:47] 2.11.2.0 7147 151245 137336 157899 1 55 12940477 25165824 899 130560 155 41378566 99.816 28863996 842 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-31 00:59:47] CVMFS is ok
[2026-03-31 00:59:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 00:59:47] Checking for apptainer binary...
[2026-03-31 00:59:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-31 00:59:47] Running /usr/bin/apptainer --version
[2026-03-31 00:59:47] apptainer version 1.3.2-1.el7
[2026-03-31 00:59:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 01:00:07] cg-vwn412.simple-grid.lan
[2026-03-31 01:00:07] apptainer works
[2026-03-31 01:00:07] Set ATHENA_PROC_NUMBER=8
[2026-03-31 01:00:07] Set ATHENA_CORE_NUMBER=8
[2026-03-31 01:00:07] Starting ATLAS job with PandaID=7074218496
[2026-03-31 01:00:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 05:55:25]  *** The last 200 lines of the pilot log: ***
[2026-03-31 05:55:25] 2026-03-31 03:54:18,477 | INFO     | this job has now completed (state=finished)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,477 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,477 | INFO     | log transfer has been attempted: DONE
[2026-03-31 05:55:25] 2026-03-31 03:54:18,477 | INFO     | job 7074218496 has finished - writing final server update
[2026-03-31 05:55:25] 2026-03-31 03:54:18,478 | INFO     | total number of processed events: 400 (read)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,480 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7074218496/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,481 | INFO     | extracted standard info from prmon json
[2026-03-31 05:55:25] 2026-03-31 03:54:18,481 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 05:55:25] 2026-03-31 03:54:18,481 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 05:55:25] 2026-03-31 03:54:18,481 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 05:55:25] 2026-03-31 03:54:18,487 | INFO     | fitting pss+swap vs Time
[2026-03-31 05:55:25] 2026-03-31 03:54:18,488 | INFO     | sum of square deviations: 6590404498.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,491 | INFO     | sum of deviations: 76755062858.99997
[2026-03-31 05:55:25] 2026-03-31 03:54:18,491 | INFO     | mean x (centered): 0.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,491 | INFO     | mean y: 2462271.8303249096
[2026-03-31 05:55:25] 2026-03-31 03:54:18,491 | INFO     | intersect: 2462271.8303249096
[2026-03-31 05:55:25] 2026-03-31 03:54:18,492 | INFO     | chi2: 8.698197559412222
[2026-03-31 05:55:25] 2026-03-31 03:54:18,492 | INFO     | sum of square deviations: 6239923508.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,496 | INFO     | sum of deviations: 112634872337.00002
[2026-03-31 05:55:25] 2026-03-31 03:54:18,497 | INFO     | mean x (centered): 0.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,497 | INFO     | mean y: 2477705.8529411764
[2026-03-31 05:55:25] 2026-03-31 03:54:18,497 | INFO     | intersect: 2477705.8529411764
[2026-03-31 05:55:25] 2026-03-31 03:54:18,497 | INFO     | chi2: 7.213252802153058
[2026-03-31 05:55:25] 2026-03-31 03:54:18,498 | INFO     | current chi2=7.213252802153058 (change=17.071867442839597 %)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,498 | INFO     | right removable region: 271
[2026-03-31 05:55:25] 2026-03-31 03:54:18,498 | INFO     | sum of square deviations: 6239923508.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,505 | INFO     | sum of deviations: -19780275562.500004
[2026-03-31 05:55:25] 2026-03-31 03:54:18,505 | INFO     | mean x (centered): 0.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,505 | INFO     | mean y: 2504244.5772058824
[2026-03-31 05:55:25] 2026-03-31 03:54:18,505 | INFO     | intersect: 2504244.5772058824
[2026-03-31 05:55:25] 2026-03-31 03:54:18,506 | INFO     | chi2: 3.8848602553936606
[2026-03-31 05:55:25] 2026-03-31 03:54:18,506 | INFO     | current chi2=3.8848602553936606 (change=55.337180733611916 %)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,507 | INFO     | sum of square deviations: 5902093918.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,509 | INFO     | sum of deviations: -81382283129.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,509 | INFO     | mean x (centered): 0.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,510 | INFO     | mean y: 2531960.8689138577
[2026-03-31 05:55:25] 2026-03-31 03:54:18,510 | INFO     | intersect: 2531960.8689138577
[2026-03-31 05:55:25] 2026-03-31 03:54:18,510 | INFO     | chi2: 1.836729602378206
[2026-03-31 05:55:25] 2026-03-31 03:54:18,510 | INFO     | current chi2=1.836729602378206 (change=52.72083211157652 %)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,511 | INFO     | sum of square deviations: 5576683165.5
[2026-03-31 05:55:25] 2026-03-31 03:54:18,514 | INFO     | sum of deviations: -89515125239.5
[2026-03-31 05:55:25] 2026-03-31 03:54:18,514 | INFO     | mean x (centered): 0.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,514 | INFO     | mean y: 2535741.080152672
[2026-03-31 05:55:25] 2026-03-31 03:54:18,514 | INFO     | intersect: 2535741.080152672
[2026-03-31 05:55:25] 2026-03-31 03:54:18,515 | INFO     | chi2: 1.7575062616014319
[2026-03-31 05:55:25] 2026-03-31 03:54:18,515 | INFO     | current chi2=1.7575062616014319 (change=4.313282732210306 %)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,515 | INFO     | left removable region: 15
[2026-03-31 05:55:25] 2026-03-31 03:54:18,516 | INFO     | sum of square deviations: 5202255680.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,518 | INFO     | sum of deviations: -52418210455.5
[2026-03-31 05:55:25] 2026-03-31 03:54:18,518 | INFO     | mean x (centered): 0.0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,518 | INFO     | mean y: 2553606.07421875
[2026-03-31 05:55:25] 2026-03-31 03:54:18,519 | INFO     | intersect: 2553606.07421875
[2026-03-31 05:55:25] 2026-03-31 03:54:18,519 | INFO     | chi2: 0.12072308312170307
[2026-03-31 05:55:25] 2026-03-31 03:54:18,519 | INFO     | current memory leak: -10.08 B/s (using 256 data points, chi2=0.12)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,520 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,520 | INFO     | ..............................
[2026-03-31 05:55:25] 2026-03-31 03:54:18,520 | INFO     | . Timing measurements:
[2026-03-31 05:55:25] 2026-03-31 03:54:18,520 | INFO     | . get job = 0 s
[2026-03-31 05:55:25] 2026-03-31 03:54:18,520 | INFO     | . initial setup = 124 s
[2026-03-31 05:55:25] 2026-03-31 03:54:18,521 | INFO     | . payload setup = 265 s
[2026-03-31 05:55:25] 2026-03-31 03:54:18,521 | INFO     | . stage-in = 0 s
[2026-03-31 05:55:25] 2026-03-31 03:54:18,521 | INFO     | . payload execution = 16962 s
[2026-03-31 05:55:25] 2026-03-31 03:54:18,521 | INFO     | . stage-out = 4 s
[2026-03-31 05:55:25] 2026-03-31 03:54:18,521 | INFO     | . log creation = 1 s
[2026-03-31 05:55:25] 2026-03-31 03:54:18,521 | INFO     | ..............................
[2026-03-31 05:55:25] 2026-03-31 03:54:18,682 | INFO     | 
[2026-03-31 05:55:25] 2026-03-31 03:54:18,682 | INFO     | job summary report
[2026-03-31 05:55:25] 2026-03-31 03:54:18,682 | INFO     | --------------------------------------------------
[2026-03-31 05:55:25] 2026-03-31 03:54:18,682 | INFO     | PanDA job id: 7074218496
[2026-03-31 05:55:25] 2026-03-31 03:54:18,682 | INFO     | task id: 49499511
[2026-03-31 05:55:25] 2026-03-31 03:54:18,682 | INFO     | errors: (none)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,682 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 05:55:25] 2026-03-31 03:54:18,682 | INFO     | pilot state: finished 
[2026-03-31 05:55:25] 2026-03-31 03:54:18,682 | INFO     | transexitcode: 0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | exeerrorcode: 0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | exeerrordiag: 
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | exitcode: 0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | exitmsg: OK
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | cpuconsumptiontime: 63962 s
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | nevents: 400
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | neventsw: 0
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | pid: 27818
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | pgrp: 27818
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | corecount: 8
[2026-03-31 05:55:25] 2026-03-31 03:54:18,683 | INFO     | event service: False
[2026-03-31 05:55:25] 2026-03-31 03:54:18,684 | INFO     | sizes: {0: 2279144, 1: 2279829, 2: 2281658, 13: 2281658, 17232: 2313639, 17233: 2313638, 17238: 2322820, 17240: 2323070}
[2026-03-31 05:55:25] 2026-03-31 03:54:18,684 | INFO     | --------------------------------------------------
[2026-03-31 05:55:25] 2026-03-31 03:54:18,684 | INFO     | 
[2026-03-31 05:55:25] 2026-03-31 03:54:18,684 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-31 05:55:25] 2026-03-31 03:54:18,706 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,707 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,707 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,707 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,708 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,709 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 05:55:25] 2026-03-31 03:54:18,709 | INFO     | job 7074218496 has completed (purged errors)
[2026-03-31 05:55:25] 2026-03-31 03:54:18,709 | INFO     | overall cleanup function is called
[2026-03-31 05:55:25] 2026-03-31 03:54:19,718 | INFO     | --- collectZombieJob: --- 10, [27818]
[2026-03-31 05:55:25] 2026-03-31 03:54:19,718 | INFO     | zombie collector waiting for pid 27818
[2026-03-31 05:55:25] 2026-03-31 03:54:19,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 05:55:25] 2026-03-31 03:54:19,718 | INFO     | collected zombie processes
[2026-03-31 05:55:25] 2026-03-31 03:54:19,718 | INFO     | will attempt to kill all subprocesses of pid=27818
[2026-03-31 05:55:25] 2026-03-31 03:54:19,793 | INFO     | process IDs to be killed: [27818] (in reverse order)
[2026-03-31 05:55:25] 2026-03-31 03:54:20,929 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 05:55:25] 2026-03-31 03:54:20,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 05:55:25] 2026-03-31 03:54:20,932 | INFO     | did not find any defunct processes belonging to 27818
[2026-03-31 05:55:25] 2026-03-31 03:54:20,934 | INFO     | did not find any defunct processes belonging to 27818
[2026-03-31 05:55:25] 2026-03-31 03:54:20,934 | INFO     | Ready for new job
[2026-03-31 05:55:25] 2026-03-31 03:54:20,936 | INFO     | **************************************
[2026-03-31 05:55:25] 2026-03-31 03:54:20,936 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-03-31 05:55:25] 2026-03-31 03:54:20,936 | INFO     | **************************************
[2026-03-31 05:55:25] 2026-03-31 03:54:20,936 | INFO     | 
[2026-03-31 05:55:25] 2026-03-31 03:54:20,937 | INFO     | pilot is running in a VM
[2026-03-31 05:55:25] 2026-03-31 03:54:20,937 | INFO     | architecture information:
[2026-03-31 05:55:25] 2026-03-31 03:54:20,946 | INFO     | executing command: cat /etc/os-release
[2026-03-31 05:55:25] 2026-03-31 03:54:21,225 | INFO     | cat /etc/os-release:
[2026-03-31 05:55:25] NAME="CentOS Linux"
[2026-03-31 05:55:25] VERSION="7 (Core)"
[2026-03-31 05:55:25] ID="centos"
[2026-03-31 05:55:25] ID_LIKE="rhel fedora"
[2026-03-31 05:55:25] VERSION_ID="7"
[2026-03-31 05:55:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 05:55:25] ANSI_COLOR="0;31"
[2026-03-31 05:55:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 05:55:25] HOME_URL="https://www.centos.org/"
[2026-03-31 05:55:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 05:55:25] 
[2026-03-31 05:55:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 05:55:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 05:55:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 05:55:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 05:55:25] 
[2026-03-31 05:55:25] 2026-03-31 03:54:21,226 | INFO     | **************************************
[2026-03-31 05:55:25] 2026-03-31 03:54:21,729 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-31 05:55:25] 2026-03-31 03:54:22,051 | INFO     | sufficient remaining disk space (496977838080 B)
[2026-03-31 05:55:25] 2026-03-31 03:54:22,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 05:55:25] 2026-03-31 03:54:22,052 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 05:55:25] 2026-03-31 03:54:22,052 | INFO     | update_server=False
[2026-03-31 05:55:25] 2026-03-31 03:54:22,052 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-03-31 05:55:25] 2026-03-31 03:54:22,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 05:55:25] 2026-03-31 03:54:22,054 | INFO     | aborting loop
[2026-03-31 05:55:25] 2026-03-31 03:54:22,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 05:55:25] 2026-03-31 03:54:22,997 | INFO     | all data control threads have been joined
[2026-03-31 05:55:25] 2026-03-31 03:54:23,058 | INFO     | [job] retrieve thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:23,060 | INFO     | [job] job monitor thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:23,192 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:23,224 | INFO     | [payload] failed_post thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:23,307 | INFO     | all payload control threads have been joined
[2026-03-31 05:55:25] 2026-03-31 03:54:23,313 | INFO     | [payload] validate_post thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:23,555 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:23,612 | INFO     | all job control threads have been joined
[2026-03-31 05:55:25] 2026-03-31 03:54:23,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 05:55:25] 2026-03-31 03:54:23,969 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:24,003 | INFO     | [data] control thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:24,054 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:24,063 | INFO     | [data] copytool_out thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:24,106 | INFO     | [job] validate thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:24,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 05:55:25] 2026-03-31 03:54:24,313 | INFO     | [payload] control thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:24,402 | INFO     | [data] copytool_in thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:24,618 | INFO     | [job] control thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:24,702 | INFO     | [job] queue monitor thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:28,129 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 05:55:25] 2026-03-31 03:54:50,742 | INFO     | PID=23351 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-31 05:55:25] 2026-03-31 03:54:50,742 | INFO     | .. there are 2 such processes running
[2026-03-31 05:55:25] 2026-03-31 03:54:50,743 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 05:55:25] 2026-03-31 03:54:50,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 05:55:25] 2026-03-31 03:54:50,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 05:55:25] 2026-03-31 03:55:14,312 | INFO     | [monitor] cgroup control has ended
[2026-03-31 05:55:25] 2026-03-31 03:55:14,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140391441270592)>', '<ExcThread(monitor, started 140390862677760)>']
[2026-03-31 05:55:25] 2026-03-31 03:55:14,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 05:55:25] 2026-03-31 03:55:14,888 | INFO     | [monitor] control thread has ended
[2026-03-31 05:55:25] 2026-03-31 03:55:19,484 | INFO     | all workflow threads have been joined
[2026-03-31 05:55:25] 2026-03-31 03:55:19,484 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 05:55:25] 2026-03-31 03:55:19,484 | INFO     | traces error code: 0
[2026-03-31 05:55:25] 2026-03-31 03:55:19,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 05:55:25] 2026-03-31 03:55:20,001 [wrapper] ==== pilot stdout END ====
[2026-03-31 05:55:25] 2026-03-31 03:55:20,089 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 05:55:25] 2026-03-31 03:55:20,187 [wrapper] pilotpid: 23351
[2026-03-31 05:55:25] 2026-03-31 03:55:20,265 [wrapper] Pilot exit status: 0
[2026-03-31 05:55:25] 2026-03-31 03:55:20,736 [wrapper] pandaids: 7074218496
[2026-03-31 05:55:25] 2026-03-31 03:55:21,900 [wrapper] cleanup supervisor_pilot  1500 23352
[2026-03-31 05:55:25] 2026-03-31 03:55:21,986 [wrapper] Test setup, not cleaning
[2026-03-31 05:55:25] 2026-03-31 03:55:22,098 [wrapper] apfmon messages muted
[2026-03-31 05:55:25] 2026-03-31 03:55:22,151 [wrapper] ==== wrapper stdout END ====
[2026-03-31 05:55:25] 2026-03-31 03:55:22,253 [wrapper] ==== wrapper stderr END ====
[2026-03-31 05:55:25]  *** Error codes and diagnostics ***
[2026-03-31 05:55:25]     "exeErrorCode": 0,
[2026-03-31 05:55:25]     "pilotErrorCode": 0,
[2026-03-31 05:55:25]  *** Listing of results directory ***
[2026-03-31 05:55:25] total 441624
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc      5118 Mar 30 14:39 queuedata.json
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc    644034 Mar 30 14:39 pilot3.tar.gz
[2026-03-31 05:55:25] -rwx------. 1 boinc boinc     36322 Mar 30 14:40 runpilot2-wrapper.sh
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc       100 Mar 31 00:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 05:55:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 00:59 run_atlas
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc       105 Mar 31 00:59 job.xml
[2026-03-31 05:55:25] -rw-r--r--. 2 boinc boinc 261033507 Mar 31 00:59 EVNT.49474298._000002.pool.root.1
[2026-03-31 05:55:25] -rw-r--r--. 2 boinc boinc    656746 Mar 31 00:59 input.tar.gz
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc      6391 Mar 31 00:59 init_data.xml
[2026-03-31 05:55:25] -rw-r--r--. 2 boinc boinc     15845 Mar 31 00:59 start_atlas.sh
[2026-03-31 05:55:25] drwxrwx--x. 2 boinc boinc        68 Mar 31 00:59 shared
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc         0 Mar 31 00:59 boinc_lockfile
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc      2586 Mar 31 01:00 pandaJob.out
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc       415 Mar 31 01:06 workernode_map.json
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc   1004000 Mar 31 01:06 agis_schedconf.cvmfs.json
[2026-03-31 05:55:25] drwx------. 5 boinc boinc      4096 Mar 31 01:06 pilot3
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc 183115934 Mar 31 05:52 HITS.49499511._000042.pool.root.1
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc       530 Mar 31 05:53 boinc_task_state.xml
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc      1011 Mar 31 05:54 memory_monitor_summary.json
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc   1511579 Mar 31 05:54 agis_ddmendpoints.agis.ALL.json
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc    423578 Mar 31 05:54 log.49499511._000042.job.log.tgz.1
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc      6331 Mar 31 05:54 heartbeat_new.json
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc      6222 Mar 31 05:54 heartbeat.json
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc        95 Mar 31 05:54 pilot_heartbeat.json
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc        28 Mar 31 05:55 wrapper_checkpoint.txt
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc      8192 Mar 31 05:55 boinc_mmap_file
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc      4879 Mar 31 05:55 pilotlog.txt
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc   1586010 Mar 31 05:55 log.49499511._000042.job.log.1
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc       357 Mar 31 05:55 output.list
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc       620 Mar 31 05:55 runtime_log
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc   2027520 Mar 31 05:55 result.tar.gz
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc      8816 Mar 31 05:55 runtime_log.err
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc       656 Mar 31 05:55 0TeLDm85QR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmzYNKDmfhss7m.diag
[2026-03-31 05:55:25] -rw-r--r--. 1 boinc boinc     20578 Mar 31 05:55 stderr.txt
[2026-03-31 05:55:25] HITS file was successfully produced:
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc 183115934 Mar 31 05:52 shared/HITS.pool.root.1
[2026-03-31 05:55:25]  *** Contents of shared directory: ***
[2026-03-31 05:55:25] total 436384
[2026-03-31 05:55:25] -rw-r--r--. 2 boinc boinc 261033507 Mar 31 00:59 ATLAS.root_0
[2026-03-31 05:55:25] -rw-r--r--. 2 boinc boinc    656746 Mar 31 00:59 input.tar.gz
[2026-03-31 05:55:25] -rw-r--r--. 2 boinc boinc     15845 Mar 31 00:59 start_atlas.sh
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc 183115934 Mar 31 05:52 HITS.pool.root.1
[2026-03-31 05:55:25] -rw-------. 1 boinc boinc   2027520 Mar 31 05:55 result.tar.gz
05:55:26 (19369): run_atlas exited; CPU time 64135.221483
05:55:26 (19369): called boinc_finish(0)

</stderr_txt>
]]>

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