Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:33:34 (1623496): wrapper (7.7.26015): starting
08:33:34 (1623496): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 08:33:34] Arguments: --nthreads 8
[2026-03-30 08:33:34] Threads: 8
[2026-03-30 08:33:34] Checking for CVMFS
[2026-03-30 08:33:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 08:33:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 08:33:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 08:33:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 08:33:35] 2.13.3.0 7405 138082 205884 157881 3 518 37131545 40960000 21148 16776704 0 585336642 99.672 567247307 34619 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-30 08:33:35] CVMFS is ok
[2026-03-30 08:33:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 08:33:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 08:33:35] Further information can be found at the LHC@home message board.
[2026-03-30 08:33:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 08:33:35] Checking for apptainer binary...
[2026-03-30 08:33:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 08:33:35] Running /usr/bin/apptainer --version
[2026-03-30 08:33:35] apptainer version 1.4.5-2.el9
[2026-03-30 08:33:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 08:33:35] c-212-3.aglt2.org
[2026-03-30 08:33:35] apptainer works
[2026-03-30 08:33:35] Set ATHENA_PROC_NUMBER=8
[2026-03-30 08:33:35] Set ATHENA_CORE_NUMBER=8
[2026-03-30 08:33:35] Starting ATLAS job with PandaID=7072133440
[2026-03-30 08:33:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:00:08 (1623496): BOINC client no longer exists - exiting
10:00:08 (1623496): timer handler: client dead, exiting
10:11:03 (2250854): wrapper (7.7.26015): starting
10:11:03 (2250854): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 10:11:03] Arguments: --nthreads 8
[2026-03-30 10:11:03] Threads: 8
[2026-03-30 10:11:03] This job has been restarted, cleaning up previous attempt
[2026-03-30 10:11:03] Checking for CVMFS
[2026-03-30 10:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 10:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 10:11:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 10:11:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 10:11:03] 2.13.3.0 7405 138180 205236 157882 1 508 37758983 40960001 14913 16776704 0 586414345 99.672 567340471 34620 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-30 10:11:03] CVMFS is ok
[2026-03-30 10:11:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 10:11:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 10:11:03] Further information can be found at the LHC@home message board.
[2026-03-30 10:11:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 10:11:03] Checking for apptainer binary...
[2026-03-30 10:11:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 10:11:03] Running /usr/bin/apptainer --version
[2026-03-30 10:11:03] apptainer version 1.4.5-2.el9
[2026-03-30 10:11:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 10:11:03] c-212-3.aglt2.org
[2026-03-30 10:11:03] apptainer works
[2026-03-30 10:11:03] Set ATHENA_PROC_NUMBER=8
[2026-03-30 10:11:03] Set ATHENA_CORE_NUMBER=8
[2026-03-30 10:11:03] Starting ATLAS job with PandaID=7072133440
[2026-03-30 10:11:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 11:53:30]  *** The last 200 lines of the pilot log: ***
[2026-03-30 11:53:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-30 11:53:30]  is_altstaged=None
[2026-03-30 11:53:30]  is_tar=False
[2026-03-30 11:53:30]  lfn=log.49263208._008207.job.log.tgz.1
[2026-03-30 11:53:30]  mtime=0
[2026-03-30 11:53:30]  protocol_id=None
[2026-03-30 11:53:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-30 11:53:30]  replicas=None
[2026-03-30 11:53:30]  scope=mc23_13p6TeV
[2026-03-30 11:53:30]  status=None
[2026-03-30 11:53:30]  status_code=0
[2026-03-30 11:53:30]  storage_token=
[2026-03-30 11:53:30]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-7072133440/log.49263208._008207.job.log.tgz.1
[2026-03-30 11:53:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/94/log.49263208._008207.job.log.tgz.1
[2026-03-30 11:53:30]  workdir=None
[2026-03-30 11:53:30] ]
[2026-03-30 11:53:30] 2026-03-30 15:52:21,402 | INFO     | transferring file log.49263208._008207.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-7072133440/log.49263208._008207.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-30 11:53:30] 2026-03-30 15:52:21,402 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-7072133440/log.49263208._008207.job.log.tgz.1 /tmp/boinchome/slots/4/log.49263208._008207.job
[2026-03-30 11:53:30] 2026-03-30 15:52:21,503 | INFO     | adding to output.list: log.49263208._008207.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/94/log.49263208._008207.job.log.tg
[2026-03-30 11:53:30] 2026-03-30 15:52:21,503 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-30 11:53:30] 2026-03-30 15:52:21,504 | INFO     | summary of transferred files:
[2026-03-30 11:53:30] 2026-03-30 15:52:21,504 | INFO     |  -- lfn=log.49263208._008207.job.log.tgz.1, status_code=0, status=transferred
[2026-03-30 11:53:30] 2026-03-30 15:52:21,504 | INFO     | stage-out finished correctly
[2026-03-30 11:53:30] 2026-03-30 15:52:21,842 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-30 11:53:30] 2026-03-30 15:52:22,937 | INFO     | PID=2277087 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-30 11:53:30] 2026-03-30 15:52:22,937 | INFO     | .. there are 20 such processes running
[2026-03-30 11:53:30] 2026-03-30 15:52:23,248 | INFO     | monitor loop #387: job 0:7072133440 is in state 'finished'
[2026-03-30 11:53:30] 2026-03-30 15:52:23,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-30 11:53:30] 2026-03-30 15:52:23,940 | INFO     | time since job start (6068s) is within the limit (345600.0s)
[2026-03-30 11:53:30] 2026-03-30 15:52:25,108 | INFO     | job 7072133440 has state=finished
[2026-03-30 11:53:30] 2026-03-30 15:52:25,108 | INFO     | preparing for final server update for job 7072133440 in state='finished'
[2026-03-30 11:53:30] 2026-03-30 15:52:25,109 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7072133440/jobReport.json
[2026-03-30 11:53:30] 2026-03-30 15:52:25,113 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-03-30 11:53:30] 2026-03-30 15:52:25,113 | INFO     | this job has now completed (state=finished)
[2026-03-30 11:53:30] 2026-03-30 15:52:25,114 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-30 11:53:30] 2026-03-30 15:52:25,114 | INFO     | log transfer has been attempted: DONE
[2026-03-30 11:53:30] 2026-03-30 15:52:25,114 | INFO     | job 7072133440 has finished - writing final server update
[2026-03-30 11:53:30] 2026-03-30 15:52:25,115 | INFO     | total number of processed events: 400 (read)
[2026-03-30 11:53:30] 2026-03-30 15:52:25,152 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7072133440/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 11:53:30] 2026-03-30 15:52:25,153 | INFO     | extracted standard info from prmon json
[2026-03-30 11:53:30] 2026-03-30 15:52:25,154 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 11:53:30] 2026-03-30 15:52:25,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-30 11:53:30] 2026-03-30 15:52:25,155 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 11:53:30] 2026-03-30 15:52:25,155 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 11:53:30] 2026-03-30 15:52:25,159 | INFO     | fitting pss+swap vs Time
[2026-03-30 11:53:30] 2026-03-30 15:52:25,159 | INFO     | sum of square deviations: 241421716.8260872
[2026-03-30 11:53:30] 2026-03-30 15:52:25,160 | INFO     | sum of deviations: 1273979706.8695652
[2026-03-30 11:53:30] 2026-03-30 15:52:25,160 | INFO     | mean x: 1774882983.5434783
[2026-03-30 11:53:30] 2026-03-30 15:52:25,161 | INFO     | mean y: 2507231.782608696
[2026-03-30 11:53:30] 2026-03-30 15:52:25,161 | INFO     | intersect: -9363530475.303097
[2026-03-30 11:53:30] 2026-03-30 15:52:25,161 | INFO     | chi2: 0.002122651827667414
[2026-03-30 11:53:30] 2026-03-30 15:52:25,161 | INFO     | current memory leak: 5.28 B/s (using 92 data points, chi2=0.00)
[2026-03-30 11:53:30] 2026-03-30 15:52:25,162 | INFO     | could have reported an average CPU frequency of 3247 MHz (7 samples)
[2026-03-30 11:53:30] 2026-03-30 15:52:25,162 | INFO     | ..............................
[2026-03-30 11:53:30] 2026-03-30 15:52:25,162 | INFO     | . Timing measurements:
[2026-03-30 11:53:30] 2026-03-30 15:52:25,162 | INFO     | . get job = 0 s
[2026-03-30 11:53:30] 2026-03-30 15:52:25,163 | INFO     | . initial setup = 1 s
[2026-03-30 11:53:30] 2026-03-30 15:52:25,163 | INFO     | . payload setup = 11 s
[2026-03-30 11:53:30] 2026-03-30 15:52:25,163 | INFO     | . stage-in = 0 s
[2026-03-30 11:53:30] 2026-03-30 15:52:25,163 | INFO     | . payload execution = 6036 s
[2026-03-30 11:53:30] 2026-03-30 15:52:25,163 | INFO     | . stage-out = 2 s
[2026-03-30 11:53:30] 2026-03-30 15:52:25,164 | INFO     | . log creation = 0 s
[2026-03-30 11:53:30] 2026-03-30 15:52:25,164 | INFO     | ..............................
[2026-03-30 11:53:30] 2026-03-30 15:52:25,315 | INFO     | 
[2026-03-30 11:53:30] 2026-03-30 15:52:25,317 | INFO     | job summary report
[2026-03-30 11:53:30] 2026-03-30 15:52:25,317 | INFO     | --------------------------------------------------
[2026-03-30 11:53:30] 2026-03-30 15:52:25,317 | INFO     | PanDA job id: 7072133440
[2026-03-30 11:53:30] 2026-03-30 15:52:25,317 | INFO     | task id: 49263208
[2026-03-30 11:53:30] 2026-03-30 15:52:25,317 | INFO     | errors: (none)
[2026-03-30 11:53:30] 2026-03-30 15:52:25,317 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 11:53:30] 2026-03-30 15:52:25,318 | INFO     | pilot state: finished 
[2026-03-30 11:53:30] 2026-03-30 15:52:25,318 | INFO     | transexitcode: 0
[2026-03-30 11:53:30] 2026-03-30 15:52:25,318 | INFO     | exeerrorcode: 0
[2026-03-30 11:53:30] 2026-03-30 15:52:25,318 | INFO     | exeerrordiag: 
[2026-03-30 11:53:30] 2026-03-30 15:52:25,318 | INFO     | exitcode: 0
[2026-03-30 11:53:30] 2026-03-30 15:52:25,318 | INFO     | exitmsg: OK
[2026-03-30 11:53:30] 2026-03-30 15:52:25,318 | INFO     | cpuconsumptiontime: 30212 s
[2026-03-30 11:53:30] 2026-03-30 15:52:25,318 | INFO     | nevents: 400
[2026-03-30 11:53:30] 2026-03-30 15:52:25,318 | INFO     | neventsw: 0
[2026-03-30 11:53:30] 2026-03-30 15:52:25,322 | INFO     | pid: 2298677
[2026-03-30 11:53:30] 2026-03-30 15:52:25,322 | INFO     | pgrp: 2298677
[2026-03-30 11:53:30] 2026-03-30 15:52:25,322 | INFO     | corecount: 8
[2026-03-30 11:53:30] 2026-03-30 15:52:25,322 | INFO     | event service: False
[2026-03-30 11:53:30] 2026-03-30 15:52:25,323 | INFO     | sizes: {0: 2279759, 1: 2280276, 11: 2280276, 6052: 2306985, 6056: 2316039, 6060: 2316177}
[2026-03-30 11:53:30] 2026-03-30 15:52:25,323 | INFO     | --------------------------------------------------
[2026-03-30 11:53:30] 2026-03-30 15:52:25,323 | INFO     | 
[2026-03-30 11:53:30] 2026-03-30 15:52:25,323 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-30 11:53:30] 2026-03-30 15:52:25,353 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,355 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,355 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 11:53:30] 2026-03-30 15:52:25,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,355 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 11:53:30] 2026-03-30 15:52:25,355 | INFO     | job 7072133440 has completed (purged errors)
[2026-03-30 11:53:30] 2026-03-30 15:52:25,355 | INFO     | overall cleanup function is called
[2026-03-30 11:53:30] 2026-03-30 15:52:26,363 | INFO     | --- collectZombieJob: --- 10, [2298677]
[2026-03-30 11:53:30] 2026-03-30 15:52:26,364 | INFO     | zombie collector waiting for pid 2298677
[2026-03-30 11:53:30] 2026-03-30 15:52:26,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 11:53:30] 2026-03-30 15:52:26,364 | INFO     | collected zombie processes
[2026-03-30 11:53:30] 2026-03-30 15:52:26,364 | INFO     | will attempt to kill all subprocesses of pid=2298677
[2026-03-30 11:53:30] 2026-03-30 15:52:27,070 | INFO     | process IDs to be killed: [2298677] (in reverse order)
[2026-03-30 11:53:30] 2026-03-30 15:52:27,407 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 11:53:30] 2026-03-30 15:52:27,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 11:53:30] 2026-03-30 15:52:27,452 | INFO     | did not find any defunct processes belonging to 2298677
[2026-03-30 11:53:30] 2026-03-30 15:52:27,481 | INFO     | did not find any defunct processes belonging to 2298677
[2026-03-30 11:53:30] 2026-03-30 15:52:27,482 | INFO     | ready for new job
[2026-03-30 11:53:30] 2026-03-30 15:52:27,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-30 11:53:30] 2026-03-30 15:52:27,484 | INFO     | **************************************
[2026-03-30 11:53:30] 2026-03-30 15:52:27,486 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-30 11:53:30] 2026-03-30 15:52:27,486 | INFO     | **************************************
[2026-03-30 11:53:30] 2026-03-30 15:52:27,486 | INFO     | 
[2026-03-30 11:53:30] 2026-03-30 15:52:27,495 | INFO     | architecture information:
[2026-03-30 11:53:30] 2026-03-30 15:52:27,499 | INFO     | executing command: cat /etc/os-release
[2026-03-30 11:53:30] 2026-03-30 15:52:27,642 | INFO     | cat /etc/os-release:
[2026-03-30 11:53:30] NAME="CentOS Linux"
[2026-03-30 11:53:30] VERSION="7 (Core)"
[2026-03-30 11:53:30] ID="centos"
[2026-03-30 11:53:30] ID_LIKE="rhel fedora"
[2026-03-30 11:53:30] VERSION_ID="7"
[2026-03-30 11:53:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 11:53:30] ANSI_COLOR="0;31"
[2026-03-30 11:53:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 11:53:30] HOME_URL="https://www.centos.org/"
[2026-03-30 11:53:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 11:53:30] 
[2026-03-30 11:53:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 11:53:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 11:53:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 11:53:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 11:53:30] 
[2026-03-30 11:53:30] 2026-03-30 15:52:27,643 | INFO     | **************************************
[2026-03-30 11:53:30] 2026-03-30 15:52:28,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-30 11:53:30] 2026-03-30 15:52:28,188 | INFO     | sufficient remaining disk space (125989552128 B)
[2026-03-30 11:53:30] 2026-03-30 15:52:28,189 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 11:53:30] 2026-03-30 15:52:28,189 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 11:53:30] 2026-03-30 15:52:28,189 | INFO     | update_server=False
[2026-03-30 11:53:30] 2026-03-30 15:52:28,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-30 11:53:30] 2026-03-30 15:52:28,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 11:53:30] 2026-03-30 15:52:28,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 11:53:30] 2026-03-30 15:52:28,271 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-30 11:53:30] 2026-03-30 15:52:28,272 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-30 11:53:30] 2026-03-30 15:52:28,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 11:53:30] 2026-03-30 15:52:28,272 | INFO     | will abort loop
[2026-03-30 11:53:30] 2026-03-30 15:52:29,062 | INFO     | all data control threads have been joined
[2026-03-30 11:53:30] 2026-03-30 15:52:29,194 | INFO     | [job] retrieve thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:29,277 | INFO     | [job] job monitor thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:29,307 | INFO     | all payload control threads have been joined
[2026-03-30 11:53:30] 2026-03-30 15:52:29,615 | INFO     | all job control threads have been joined
[2026-03-30 11:53:30] 2026-03-30 15:52:29,705 | INFO     | [payload] failed_post thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:29,912 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:30,068 | INFO     | [data] control thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:30,087 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:30,098 | INFO     | [data] copytool_in thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:30,196 | INFO     | [data] copytool_out thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:30,269 | INFO     | [payload] validate_post thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:30,314 | INFO     | [payload] control thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:30,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 11:53:30] 2026-03-30 15:52:30,395 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:30,433 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:30,621 | INFO     | [job] control thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:30,648 | INFO     | [job] validate thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:31,336 | INFO     | [job] queue monitor thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:32,202 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 11:53:30] 2026-03-30 15:52:58,112 | INFO     | PID=2277087 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-30 11:53:30] 2026-03-30 15:52:58,113 | INFO     | .. there are 20 such processes running
[2026-03-30 11:53:30] 2026-03-30 15:52:58,113 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 11:53:30] 2026-03-30 15:52:58,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 11:53:30] 2026-03-30 15:52:58,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 11:53:30] 2026-03-30 15:53:25,055 | INFO     | [monitor] cgroup control has ended
[2026-03-30 11:53:30] 2026-03-30 15:53:25,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877668435776)>', '<ExcThread(monitor, started 139877312079616)>']
[2026-03-30 11:53:30] 2026-03-30 15:53:25,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 11:53:30] 2026-03-30 15:53:25,296 | INFO     | [monitor] control thread has ended
[2026-03-30 11:53:30] 2026-03-30 15:53:30,214 | INFO     | all workflow threads have been joined
[2026-03-30 11:53:30] 2026-03-30 15:53:30,215 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 11:53:30] 2026-03-30 15:53:30,215 | INFO     | traces error code: 0
[2026-03-30 11:53:30] 2026-03-30 15:53:30,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 11:53:30] 2026-03-30 15:53:30,318 [wrapper] ==== pilot stdout END ====
[2026-03-30 11:53:30] 2026-03-30 15:53:30,321 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 11:53:30] 2026-03-30 15:53:30,323 [wrapper] pilotpid: 2277087
[2026-03-30 11:53:30] 2026-03-30 15:53:30,325 [wrapper] Pilot exit status: 0
[2026-03-30 11:53:30] 2026-03-30 15:53:30,341 [wrapper] pandaids: 7072133440 7072133440
[2026-03-30 11:53:30] 2026-03-30 15:53:30,457 [wrapper] cleanup supervisor_pilot 2709462 2277088
[2026-03-30 11:53:30] 2026-03-30 15:53:30,461 [wrapper] Test setup, not cleaning
[2026-03-30 11:53:30] 2026-03-30 15:53:30,464 [wrapper] apfmon messages muted
[2026-03-30 11:53:30] 2026-03-30 15:53:30,468 [wrapper] ==== wrapper stdout END ====
[2026-03-30 11:53:30] 2026-03-30 15:53:30,471 [wrapper] ==== wrapper stderr END ====
[2026-03-30 11:53:30]  *** Error codes and diagnostics ***
[2026-03-30 11:53:30]     "exeErrorCode": 0,
[2026-03-30 11:53:30]     "exeErrorDiag": "",
[2026-03-30 11:53:30]     "pilotErrorCode": 0,
[2026-03-30 11:53:30]     "pilotErrorDiag": "",
[2026-03-30 11:53:30]  *** Listing of results directory ***
[2026-03-30 11:53:30] total 635912
[2026-03-30 11:53:30] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas    585013 Mar 30 00:32 pilot3.tar.gz
[2026-03-30 11:53:30] -rwx------. 1 boincer umatlas     36322 Mar 30 00:35 runpilot2-wrapper.sh
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas      5118 Mar 30 00:36 queuedata.json
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas       100 Mar 30 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 11:53:30] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 30 08:33 run_atlas
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas       105 Mar 30 08:33 job.xml
[2026-03-30 11:53:30] -rw-r--r--. 3 boincer umatlas 223759180 Mar 30 08:33 EVNT.49263206._000378.pool.root.1
[2026-03-30 11:53:30] -rw-r--r--. 3 boincer umatlas 223759180 Mar 30 08:33 ATLAS.root_0
[2026-03-30 11:53:30] -rw-r--r--. 2 boincer umatlas     15845 Mar 30 08:33 start_atlas.sh
[2026-03-30 11:53:30] drwxrwx--x. 2 boincer umatlas      4096 Mar 30 08:33 shared
[2026-03-30 11:53:30] -rw-r--r--. 2 boincer umatlas    597539 Mar 30 08:33 input.tar.gz
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas         0 Mar 30 08:33 boinc_lockfile
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas      2573 Mar 30 10:11 pandaJob.out
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas        57 Mar 30 10:11 setup.sh.local
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas   1003977 Mar 30 10:11 agis_schedconf.cvmfs.json
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas       422 Mar 30 10:11 workernode_map.json
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas      6959 Mar 30 11:47 init_data.xml
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas 197426691 Mar 30 11:51 HITS.49263208._008207.pool.root.1
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas       530 Mar 30 11:51 boinc_task_state.xml
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas        96 Mar 30 11:52 pilot_heartbeat.json
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas      1047 Mar 30 11:52 memory_monitor_summary.json
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas   1511579 Mar 30 11:52 agis_ddmendpoints.agis.ALL.json
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas    335348 Mar 30 11:52 log.49263208._008207.job.log.tgz.1
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas      6340 Mar 30 11:52 heartbeat.json
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas      8192 Mar 30 11:53 boinc_mmap_file
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas        28 Mar 30 11:53 wrapper_checkpoint.txt
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas      5007 Mar 30 11:53 pilotlog.txt
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas    810141 Mar 30 11:53 log.49263208._008207.job.log.1
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas       357 Mar 30 11:53 output.list
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas       620 Mar 30 11:53 runtime_log
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas   1167360 Mar 30 11:53 result.tar.gz
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas       781 Mar 30 11:53 ts1KDmcWJR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmsuOKDmokNbDo.diag
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas      9421 Mar 30 11:53 runtime_log.err
[2026-03-30 11:53:30] -rw-r--r--. 1 boincer umatlas     23802 Mar 30 11:53 stderr.txt
[2026-03-30 11:53:30] HITS file was successfully produced:
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas 197426691 Mar 30 11:51 shared/HITS.pool.root.1
[2026-03-30 11:53:30]  *** Contents of shared directory: ***
[2026-03-30 11:53:30] total 413060
[2026-03-30 11:53:30] -rw-r--r--. 3 boincer umatlas 223759180 Mar 30 08:33 ATLAS.root_0
[2026-03-30 11:53:30] -rw-r--r--. 2 boincer umatlas     15845 Mar 30 08:33 start_atlas.sh
[2026-03-30 11:53:30] -rw-r--r--. 2 boincer umatlas    597539 Mar 30 08:33 input.tar.gz
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas 197426691 Mar 30 11:51 HITS.pool.root.1
[2026-03-30 11:53:30] -rw-------. 1 boincer umatlas   1167360 Mar 30 11:53 result.tar.gz
11:53:32 (2250854): run_atlas exited; CPU time 30391.506495
11:53:32 (2250854): called boinc_finish(0)

</stderr_txt>
]]>

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