Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
21:17:42 (2241028): wrapper (7.7.26015): starting
21:17:42 (2241028): wrapper: running run_atlas (--nthreads 12)
[2026-04-05 21:17:42] Arguments: --nthreads 12
[2026-04-05 21:17:42] Threads: 12
[2026-04-05 21:17:42] Checking for CVMFS
[2026-04-05 21:17:42] No cvmfs_config command found, will try listing directly
[2026-04-05 21:17:42] CVMFS is ok
[2026-04-05 21:17:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 21:17:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 21:17:42] Further information can be found at the LHC@home message board.
[2026-04-05 21:17:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 21:17:42] Checking for apptainer binary...
[2026-04-05 21:17:42] which: no apptainer in ((null))
[2026-04-05 21:17:42] apptainer is not installed, using version from CVMFS
[2026-04-05 21:17:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 21:17:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-04-05 21:17:42] apptainer works
[2026-04-05 21:17:42] Set ATHENA_PROC_NUMBER=12
[2026-04-05 21:17:42] Set ATHENA_CORE_NUMBER=12
[2026-04-05 21:17:42] Starting ATLAS job with PandaID=7072206812
[2026-04-05 21:17:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:22:10 (160256): wrapper (7.7.26015): starting
18:22:10 (160256): wrapper: running run_atlas (--nthreads 12)
[2026-04-06 18:22:10] Arguments: --nthreads 12
[2026-04-06 18:22:10] Threads: 12
[2026-04-06 18:22:10] This job has been restarted, cleaning up previous attempt
[2026-04-06 18:22:10] Checking for CVMFS
[2026-04-06 18:22:10] No cvmfs_config command found, will try listing directly
[2026-04-06 18:22:10] CVMFS is ok
[2026-04-06 18:22:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-06 18:22:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-06 18:22:10] Further information can be found at the LHC@home message board.
[2026-04-06 18:22:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-06 18:22:10] Checking for apptainer binary...
[2026-04-06 18:22:10] which: no apptainer in ((null))
[2026-04-06 18:22:10] apptainer is not installed, using version from CVMFS
[2026-04-06 18:22:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-06 18:22:10] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-04-06 18:22:10] apptainer works
[2026-04-06 18:22:10] Set ATHENA_PROC_NUMBER=12
[2026-04-06 18:22:10] Set ATHENA_CORE_NUMBER=12
[2026-04-06 18:22:10] Starting ATLAS job with PandaID=7072206812
[2026-04-06 18:22:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-06 18:25:15] Job failed
[2026-04-06 18:25:15] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-04-06 18:25:15] ++ pwd
[2026-04-06 18:25:15] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot48/slots/7/
[2026-04-06 18:25:15] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot48/slots/7/
[2026-04-06 18:25:15] + mv ATLAS.root_0 EVNT.49263189._000226.pool.root.1
[2026-04-06 18:25:15] mv: 'ATLAS.root_0' and 'EVNT.49263189._000226.pool.root.1' are the same file
[2026-04-06 18:25:15] + tar --strip-components=5 -xvf input.tar.gz
[2026-04-06 18:25:15] + umask 077
[2026-04-06 18:25:15] ++ date +%s
[2026-04-06 18:25:15] + ACCOUNTING_STARTTIME=1775492531
[2026-04-06 18:25:15] + echo 'Detecting resource accounting method available for the job.'
[2026-04-06 18:25:15] Detecting resource accounting method available for the job.
[2026-04-06 18:25:15] + JOB_ACCOUNTING=
[2026-04-06 18:25:15] + command -v arc-job-cgroup
[2026-04-06 18:25:15] + '[' -z '' ']'
[2026-04-06 18:25:15] + GNU_TIME=/usr/bin/time
[2026-04-06 18:25:15] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-04-06 18:25:15] Looking for /usr/bin/time tool for accounting measurements
[2026-04-06 18:25:15] + '[' '!' -z /usr/bin/time ']'
[2026-04-06 18:25:15] + /usr/bin/time --version
[2026-04-06 18:25:15] + echo 'GNU time found and will be used for job accounting.'
[2026-04-06 18:25:15] GNU time found and will be used for job accounting.
[2026-04-06 18:25:15] + JOB_ACCOUNTING=gnutime
[2026-04-06 18:25:15] + '[' -z gnutime ']'
[2026-04-06 18:25:15] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-04-06 18:25:15] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-04-06 18:25:15] + export GTAG=http://aipanda404.cern.ch/data/jobs/2026-03-30/BOINC_MCORE/7072206812.out
[2026-04-06 18:25:15] + GTAG=http://aipanda404.cern.ch/data/jobs/2026-03-30/BOINC_MCORE/7072206812.out
[2026-04-06 18:25:15] + export PILOT_NOKILL=YES
[2026-04-06 18:25:15] + PILOT_NOKILL=YES
[2026-04-06 18:25:15] + export GRID_GLOBAL_JOBID=AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm
[2026-04-06 18:25:15] + GRID_GLOBAL_JOBID=AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm
[2026-04-06 18:25:15] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm
[2026-04-06 18:25:15] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm
[2026-04-06 18:25:15] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-04-06 18:25:15] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-04-06 18:25:15] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-04-06 18:25:15] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-04-06 18:25:15] ++ pwd
[2026-04-06 18:25:15] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot48/slots/7
[2026-04-06 18:25:15] + RUNTIME_JOB_STDIN=/dev/null
[2026-04-06 18:25:15] ++ pwd
[2026-04-06 18:25:15] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot48/slots/7/log.49263191._007512.job.log.1
[2026-04-06 18:25:15] ++ pwd
[2026-04-06 18:25:15] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot48/slots/7/log.49263191._007512.job.log.1
[2026-04-06 18:25:15] ++ pwd
[2026-04-06 18:25:15] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot48/slots/7.diag
[2026-04-06 18:25:15] + '[' '!' -z '' ']'
[2026-04-06 18:25:15] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-04-06 18:25:15] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-04-06 18:25:15] + RUNTIME_FRONTEND_SEES_NODE=
[2026-04-06 18:25:15] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-04-06 18:25:15] + '[' '!' -z '' ']'
[2026-04-06 18:25:15] + '[' -z yes ']'
[2026-04-06 18:25:15] ++ pwd
[2026-04-06 18:25:15] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot48/slots/7/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm.diag
[2026-04-06 18:25:15] + runtimeenvironments=
[2026-04-06 18:25:15] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-04-06 18:25:15] + RTE_function_0 1
[2026-04-06 18:25:15] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-04-06 18:25:15] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-04-06 18:25:15] + export BOINC_APP=ATLAS
[2026-04-06 18:25:15] + BOINC_APP=ATLAS
[2026-04-06 18:25:15] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-04-06 18:25:15] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-04-06 18:25:15] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-04-06 18:25:15] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-04-06 18:25:15] + '[' -z 1 ']'
[2026-04-06 18:25:15] + '[' 1 == 1 ']'
[2026-04-06 18:25:15] + shift
[2026-04-06 18:25:15] + export SITE_NAME=BOINC
[2026-04-06 18:25:15] + SITE_NAME=BOINC
[2026-04-06 18:25:15] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot48/slots/7/
[2026-04-06 18:25:15] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot48/slots/7/
[2026-04-06 18:25:15] + '[' -e /var/lib/boinc/var/slot48/slots/7/init_data.xml ']'
[2026-04-06 18:25:15] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot48/slots/7/init_data.xml
[2026-04-06 18:25:15] + '[' 0 -ne 0 ']'
[2026-04-06 18:25:15] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-04-06 18:25:15] + '[' -f /etc/os-release ']'
[2026-04-06 18:25:15] +++ cat /etc/os-release
[2026-04-06 18:25:15] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-04-06 18:25:15] +++ NAME='CentOS Linux'
[2026-04-06 18:25:15] +++ VERSION='7 (Core)'
[2026-04-06 18:25:15] +++ ID=centos
[2026-04-06 18:25:15] +++ ID_LIKE='rhel fedora'
[2026-04-06 18:25:15] +++ VERSION_ID=7
[2026-04-06 18:25:15] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-04-06 18:25:15] +++ ANSI_COLOR='0;31'
[2026-04-06 18:25:15] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-04-06 18:25:15] +++ HOME_URL=https://www.centos.org/
[2026-04-06 18:25:15] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-04-06 18:25:15] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-04-06 18:25:15] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-04-06 18:25:15] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-04-06 18:25:15] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-04-06 18:25:15] ++ echo 'CentOS Linux 7 (Core)'
[2026-04-06 18:25:15] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-04-06 18:25:15] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-04-06 18:25:15] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-04-06 18:25:15] + HOME=/var/lib/boinc/var/slot48/slots/7
[2026-04-06 18:25:15] + export HOME
[2026-04-06 18:25:15] + cd /var/lib/boinc/var/slot48/slots/7
[2026-04-06 18:25:15] + '[' '!' -z '' ']'
[2026-04-06 18:25:15] + '[' -z '' ']'
[2026-04-06 18:25:15] ++ /bin/hostname -f
[2026-04-06 18:25:15] + nodename=skurut28.grid.cesnet.cz
[2026-04-06 18:25:15] + echo nodename=skurut28.grid.cesnet.cz
[2026-04-06 18:25:15] + echo Processors=2
[2026-04-06 18:25:15] + echo Nodecount=1
[2026-04-06 18:25:15] + echo Benchmark=HEPSPEC:1.0
[2026-04-06 18:25:15] + executable=./runpilot2-wrapper.sh
[2026-04-06 18:25:15] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-04-06 18:25:15] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-04-06 18:25:15] ++ head -n 1
[2026-04-06 18:25:15] ++ tr -d '\0'
[2026-04-06 18:25:15] + line1='#!/bin/bash'
[2026-04-06 18:25:15] ++ echo '#!/bin/bash'
[2026-04-06 18:25:15] ++ sed -n 's/^#! *//p'
[2026-04-06 18:25:15] + shebang=/bin/bash
[2026-04-06 18:25:15] ++ echo /bin/bash
[2026-04-06 18:25:15] ++ awk '{print $1}'
[2026-04-06 18:25:15] + interpreter=/bin/bash
[2026-04-06 18:25:15] + '[' /bin/bash = /usr/bin/env ']'
[2026-04-06 18:25:15] + '[' x/bin/bash = x ']'
[2026-04-06 18:25:15] + type /bin/bash
[2026-04-06 18:25:15] + '[' xgnutime = xgnutime ']'
[2026-04-06 18:25:15] + /usr/bin/time -o /var/lib/boinc/var/slot48/slots/7/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.12.2.2 -z -t --piloturl local --mute --container
[2026-04-06 18:25:15] + RESULT=2
[2026-04-06 18:25:15] + sed -i -e /nodename=/d /var/lib/boinc/var/slot48/slots/7/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm.diag
[2026-04-06 18:25:15] ++ grep domain_name init_data.xml
[2026-04-06 18:25:15] ++ awk -F '>' '{print $2}'
[2026-04-06 18:25:15] ++ awk -F '<' '{print $1}'
[2026-04-06 18:25:15] ++ sed -e 's# #_#g'
[2026-04-06 18:25:15] + hostname=skurut28.grid.cesnet.cz
[2026-04-06 18:25:15] ++ grep user_name init_data.xml
[2026-04-06 18:25:15] ++ awk -F '>' '{print $2}'
[2026-04-06 18:25:15] ++ awk -F '<' '{print $1}'
[2026-04-06 18:25:15] ++ sed -e 's# #_#g'
[2026-04-06 18:25:15] + username=praguelcg2
[2026-04-06 18:25:15] + nodename=praguelcg2@skurut28.grid.cesnet.cz
[2026-04-06 18:25:15] + echo nodename=praguelcg2@skurut28.grid.cesnet.cz
[2026-04-06 18:25:15] + '[' -n 12 ']'
[2026-04-06 18:25:15] + sed -i -e s/Processors=1/Processors=12/ /var/lib/boinc/var/slot48/slots/7/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm.diag
[2026-04-06 18:25:15] + echo exitcode=2
[2026-04-06 18:25:15] + runtimeenvironments=
[2026-04-06 18:25:15] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-04-06 18:25:15] + RTE_function_0 2
[2026-04-06 18:25:15] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-04-06 18:25:15] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-04-06 18:25:15] + export BOINC_APP=ATLAS
[2026-04-06 18:25:15] + BOINC_APP=ATLAS
[2026-04-06 18:25:15] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-04-06 18:25:15] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-04-06 18:25:15] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-04-06 18:25:15] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-04-06 18:25:15] + '[' -z 2 ']'
[2026-04-06 18:25:15] + '[' 2 == 1 ']'
[2026-04-06 18:25:15] + '[' 0 -ne 0 ']'
[2026-04-06 18:25:15] + echo 'zip all output files'
[2026-04-06 18:25:15] + flist='*.diag '
[2026-04-06 18:25:15] + for f in ./heartbeat.json ./output.list ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1 ./gmlog/
[2026-04-06 18:25:15] + '[' -e ./heartbeat.json ']'
[2026-04-06 18:25:15] + flist='*.diag  ./heartbeat.json'
[2026-04-06 18:25:15] + for f in ./heartbeat.json ./output.list ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1 ./gmlog/
[2026-04-06 18:25:15] + '[' -e ./output.list ']'
[2026-04-06 18:25:15] + for f in ./heartbeat.json ./output.list ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1 ./gmlog/
[2026-04-06 18:25:15] + '[' -e ./log.49263191._007512.job.log.1 ']'
[2026-04-06 18:25:15] + flist='*.diag  ./heartbeat.json ./log.49263191._007512.job.log.1'
[2026-04-06 18:25:15] + for f in ./heartbeat.json ./output.list ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1 ./gmlog/
[2026-04-06 18:25:15] + '[' -e ./log.49263191._007512.job.log.1 ']'
[2026-04-06 18:25:15] + flist='*.diag  ./heartbeat.json ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1'
[2026-04-06 18:25:15] + for f in ./heartbeat.json ./output.list ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1 ./gmlog/
[2026-04-06 18:25:15] + '[' -e ./gmlog/ ']'
[2026-04-06 18:25:15] + '[' -f output.list ']'
[2026-04-06 18:25:15] + tar cvf result.tar.gz AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm.diag ./heartbeat.json ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1
[2026-04-06 18:25:15] + '[' xgnutime = xcgroup ']'
[2026-04-06 18:25:15] + '[' -n '' ']'
[2026-04-06 18:25:15] + '[' -n '' ']'
[2026-04-06 18:25:15] ++ date +%s
[2026-04-06 18:25:15] + ACCOUNTING_ENDTIME=1775492715
[2026-04-06 18:25:15] ++ date -d '1970-01-01 UTC 1775492531 seconds' +%Y%m%d%H%M%SZ
[2026-04-06 18:25:15] + echo LRMSStartTime=20260406182211Z
[2026-04-06 18:25:15] ++ date -d '1970-01-01 UTC 1775492715 seconds' +%Y%m%d%H%M%SZ
[2026-04-06 18:25:15] + echo LRMSEndTime=20260406182515Z
[2026-04-06 18:25:15] + echo walltime=184
[2026-04-06 18:25:15] + echo exitcode=2
[2026-04-06 18:25:15] + exit 2
[2026-04-06 18:25:15] ./PanDA_Pilot-7072206812/pilotlog.txt
[2026-04-06 18:25:15] ./PanDA_Pilot-7072206812/prmon.log
[2026-04-06 18:25:15] ./PanDA_Pilot-7072206812/PoolFileCatalog.xml
[2026-04-06 18:25:15] ./PanDA_Pilot-7072206812/log.EVNTtoHITS
[2026-04-06 18:25:15] ./pilotlog.txt
[2026-04-06 18:25:15] ./log.49263191._007512.job.log.1
[2026-04-06 18:25:15] ./runtime_log.err
[2026-04-06 18:25:15] ./runtime_log
[2026-04-06 18:25:15] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-04-06 18:25:15] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-04-06 18:25:15] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-04-06 18:25:15] ./pilot3/pilot/util/realtimelogger.py
[2026-04-06 18:25:15] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-04-06 18:25:15] ./pilot3/pilot/util/loggingsupport.py
06:44:22 (2224324): wrapper (7.7.26015): starting
06:44:22 (2224324): wrapper: running run_atlas (--nthreads 12)
[2026-04-07 06:44:22] Arguments: --nthreads 12
[2026-04-07 06:44:22] Threads: 12
[2026-04-07 06:44:22] This job has been restarted, cleaning up previous attempt
[2026-04-07 06:44:23] Checking for CVMFS
[2026-04-07 06:44:23] No cvmfs_config command found, will try listing directly
[2026-04-07 06:44:23] CVMFS is ok
[2026-04-07 06:44:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-07 06:44:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-07 06:44:23] Further information can be found at the LHC@home message board.
[2026-04-07 06:44:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-07 06:44:23] Checking for apptainer binary...
[2026-04-07 06:44:23] which: no apptainer in ((null))
[2026-04-07 06:44:23] apptainer is not installed, using version from CVMFS
[2026-04-07 06:44:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-07 06:44:23] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-04-07 06:44:23] apptainer works
[2026-04-07 06:44:23] Set ATHENA_PROC_NUMBER=12
[2026-04-07 06:44:23] Set ATHENA_CORE_NUMBER=12
[2026-04-07 06:44:23] Starting ATLAS job with PandaID=7072206812
[2026-04-07 06:44:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-07 06:47:28] Job failed
[2026-04-07 06:47:28] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-04-07 06:47:28] ++ pwd
[2026-04-07 06:47:28] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot48/slots/7/
[2026-04-07 06:47:28] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot48/slots/7/
[2026-04-07 06:47:28] + mv ATLAS.root_0 EVNT.49263189._000226.pool.root.1
[2026-04-07 06:47:28] mv: 'ATLAS.root_0' and 'EVNT.49263189._000226.pool.root.1' are the same file
[2026-04-07 06:47:28] + tar --strip-components=5 -xvf input.tar.gz
[2026-04-07 06:47:28] + umask 077
[2026-04-07 06:47:28] ++ date +%s
[2026-04-07 06:47:28] + ACCOUNTING_STARTTIME=1775537063
[2026-04-07 06:47:28] + echo 'Detecting resource accounting method available for the job.'
[2026-04-07 06:47:28] Detecting resource accounting method available for the job.
[2026-04-07 06:47:28] + JOB_ACCOUNTING=
[2026-04-07 06:47:28] + command -v arc-job-cgroup
[2026-04-07 06:47:28] + '[' -z '' ']'
[2026-04-07 06:47:28] + GNU_TIME=/usr/bin/time
[2026-04-07 06:47:28] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-04-07 06:47:28] Looking for /usr/bin/time tool for accounting measurements
[2026-04-07 06:47:28] + '[' '!' -z /usr/bin/time ']'
[2026-04-07 06:47:28] + /usr/bin/time --version
[2026-04-07 06:47:28] + echo 'GNU time found and will be used for job accounting.'
[2026-04-07 06:47:28] GNU time found and will be used for job accounting.
[2026-04-07 06:47:28] + JOB_ACCOUNTING=gnutime
[2026-04-07 06:47:28] + '[' -z gnutime ']'
[2026-04-07 06:47:28] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-04-07 06:47:28] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-04-07 06:47:28] + export GTAG=http://aipanda404.cern.ch/data/jobs/2026-03-30/BOINC_MCORE/7072206812.out
[2026-04-07 06:47:28] + GTAG=http://aipanda404.cern.ch/data/jobs/2026-03-30/BOINC_MCORE/7072206812.out
[2026-04-07 06:47:28] + export PILOT_NOKILL=YES
[2026-04-07 06:47:28] + PILOT_NOKILL=YES
[2026-04-07 06:47:28] + export GRID_GLOBAL_JOBID=AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm
[2026-04-07 06:47:28] + GRID_GLOBAL_JOBID=AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm
[2026-04-07 06:47:28] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm
[2026-04-07 06:47:28] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm
[2026-04-07 06:47:28] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-04-07 06:47:28] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-04-07 06:47:28] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-04-07 06:47:28] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-04-07 06:47:28] ++ pwd
[2026-04-07 06:47:28] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot48/slots/7
[2026-04-07 06:47:28] + RUNTIME_JOB_STDIN=/dev/null
[2026-04-07 06:47:28] ++ pwd
[2026-04-07 06:47:28] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot48/slots/7/log.49263191._007512.job.log.1
[2026-04-07 06:47:28] ++ pwd
[2026-04-07 06:47:28] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot48/slots/7/log.49263191._007512.job.log.1
[2026-04-07 06:47:28] ++ pwd
[2026-04-07 06:47:28] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot48/slots/7.diag
[2026-04-07 06:47:28] + '[' '!' -z '' ']'
[2026-04-07 06:47:28] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-04-07 06:47:28] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-04-07 06:47:28] + RUNTIME_FRONTEND_SEES_NODE=
[2026-04-07 06:47:28] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-04-07 06:47:28] + '[' '!' -z '' ']'
[2026-04-07 06:47:28] + '[' -z yes ']'
[2026-04-07 06:47:28] ++ pwd
[2026-04-07 06:47:28] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot48/slots/7/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm.diag
[2026-04-07 06:47:28] + runtimeenvironments=
[2026-04-07 06:47:28] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-04-07 06:47:28] + RTE_function_0 1
[2026-04-07 06:47:28] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-04-07 06:47:28] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-04-07 06:47:28] + export BOINC_APP=ATLAS
[2026-04-07 06:47:28] + BOINC_APP=ATLAS
[2026-04-07 06:47:28] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-04-07 06:47:28] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-04-07 06:47:28] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-04-07 06:47:28] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-04-07 06:47:28] + '[' -z 1 ']'
[2026-04-07 06:47:28] + '[' 1 == 1 ']'
[2026-04-07 06:47:28] + shift
[2026-04-07 06:47:28] + export SITE_NAME=BOINC
[2026-04-07 06:47:28] + SITE_NAME=BOINC
[2026-04-07 06:47:28] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot48/slots/7/
[2026-04-07 06:47:28] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot48/slots/7/
[2026-04-07 06:47:28] + '[' -e /var/lib/boinc/var/slot48/slots/7/init_data.xml ']'
[2026-04-07 06:47:28] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot48/slots/7/init_data.xml
[2026-04-07 06:47:28] + '[' 0 -ne 0 ']'
[2026-04-07 06:47:28] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-04-07 06:47:28] + '[' -f /etc/os-release ']'
[2026-04-07 06:47:28] +++ cat /etc/os-release
[2026-04-07 06:47:28] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-04-07 06:47:28] +++ NAME='CentOS Linux'
[2026-04-07 06:47:28] +++ VERSION='7 (Core)'
[2026-04-07 06:47:28] +++ ID=centos
[2026-04-07 06:47:28] +++ ID_LIKE='rhel fedora'
[2026-04-07 06:47:28] +++ VERSION_ID=7
[2026-04-07 06:47:28] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-04-07 06:47:28] +++ ANSI_COLOR='0;31'
[2026-04-07 06:47:28] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-04-07 06:47:28] +++ HOME_URL=https://www.centos.org/
[2026-04-07 06:47:28] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-04-07 06:47:28] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-04-07 06:47:28] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-04-07 06:47:28] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-04-07 06:47:28] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-04-07 06:47:28] ++ echo 'CentOS Linux 7 (Core)'
[2026-04-07 06:47:28] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-04-07 06:47:28] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-04-07 06:47:28] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-04-07 06:47:28] + HOME=/var/lib/boinc/var/slot48/slots/7
[2026-04-07 06:47:28] + export HOME
[2026-04-07 06:47:28] + cd /var/lib/boinc/var/slot48/slots/7
[2026-04-07 06:47:28] + '[' '!' -z '' ']'
[2026-04-07 06:47:28] + '[' -z '' ']'
[2026-04-07 06:47:28] ++ /bin/hostname -f
[2026-04-07 06:47:28] + nodename=skurut28.grid.cesnet.cz
[2026-04-07 06:47:28] + echo nodename=skurut28.grid.cesnet.cz
[2026-04-07 06:47:28] + echo Processors=2
[2026-04-07 06:47:28] + echo Nodecount=1
[2026-04-07 06:47:28] + echo Benchmark=HEPSPEC:1.0
[2026-04-07 06:47:28] + executable=./runpilot2-wrapper.sh
[2026-04-07 06:47:28] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-04-07 06:47:28] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-04-07 06:47:28] ++ head -n 1
[2026-04-07 06:47:28] ++ tr -d '\0'
[2026-04-07 06:47:28] + line1='#!/bin/bash'
[2026-04-07 06:47:28] ++ echo '#!/bin/bash'
[2026-04-07 06:47:28] ++ sed -n 's/^#! *//p'
[2026-04-07 06:47:28] + shebang=/bin/bash
[2026-04-07 06:47:28] ++ echo /bin/bash
[2026-04-07 06:47:28] ++ awk '{print $1}'
[2026-04-07 06:47:28] + interpreter=/bin/bash
[2026-04-07 06:47:28] + '[' /bin/bash = /usr/bin/env ']'
[2026-04-07 06:47:28] + '[' x/bin/bash = x ']'
[2026-04-07 06:47:28] + type /bin/bash
[2026-04-07 06:47:28] + '[' xgnutime = xgnutime ']'
[2026-04-07 06:47:28] + /usr/bin/time -o /var/lib/boinc/var/slot48/slots/7/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.12.2.2 -z -t --piloturl local --mute --container
[2026-04-07 06:47:28] + RESULT=2
[2026-04-07 06:47:28] + sed -i -e /nodename=/d /var/lib/boinc/var/slot48/slots/7/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm.diag
[2026-04-07 06:47:28] ++ grep domain_name init_data.xml
[2026-04-07 06:47:28] ++ awk -F '>' '{print $2}'
[2026-04-07 06:47:28] ++ awk -F '<' '{print $1}'
[2026-04-07 06:47:28] ++ sed -e 's# #_#g'
[2026-04-07 06:47:28] + hostname=skurut28.grid.cesnet.cz
[2026-04-07 06:47:28] ++ grep user_name init_data.xml
[2026-04-07 06:47:28] ++ awk -F '>' '{print $2}'
[2026-04-07 06:47:28] ++ sed -e 's# #_#g'
[2026-04-07 06:47:28] ++ awk -F '<' '{print $1}'
[2026-04-07 06:47:28] + username=praguelcg2
[2026-04-07 06:47:28] + nodename=praguelcg2@skurut28.grid.cesnet.cz
[2026-04-07 06:47:28] + echo nodename=praguelcg2@skurut28.grid.cesnet.cz
[2026-04-07 06:47:28] + '[' -n 12 ']'
[2026-04-07 06:47:28] + sed -i -e s/Processors=1/Processors=12/ /var/lib/boinc/var/slot48/slots/7/AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm.diag
[2026-04-07 06:47:28] + echo exitcode=2
[2026-04-07 06:47:28] + runtimeenvironments=
[2026-04-07 06:47:28] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-04-07 06:47:28] + RTE_function_0 2
[2026-04-07 06:47:28] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-04-07 06:47:28] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-04-07 06:47:28] + export BOINC_APP=ATLAS
[2026-04-07 06:47:28] + BOINC_APP=ATLAS
[2026-04-07 06:47:28] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-04-07 06:47:28] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-04-07 06:47:28] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-04-07 06:47:28] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-04-07 06:47:28] + '[' -z 2 ']'
[2026-04-07 06:47:28] + '[' 2 == 1 ']'
[2026-04-07 06:47:28] + '[' 0 -ne 0 ']'
[2026-04-07 06:47:28] + echo 'zip all output files'
[2026-04-07 06:47:28] + flist='*.diag '
[2026-04-07 06:47:28] + for f in ./heartbeat.json ./output.list ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1 ./gmlog/
[2026-04-07 06:47:28] + '[' -e ./heartbeat.json ']'
[2026-04-07 06:47:28] + flist='*.diag  ./heartbeat.json'
[2026-04-07 06:47:28] + for f in ./heartbeat.json ./output.list ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1 ./gmlog/
[2026-04-07 06:47:28] + '[' -e ./output.list ']'
[2026-04-07 06:47:28] + for f in ./heartbeat.json ./output.list ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1 ./gmlog/
[2026-04-07 06:47:28] + '[' -e ./log.49263191._007512.job.log.1 ']'
[2026-04-07 06:47:28] + flist='*.diag  ./heartbeat.json ./log.49263191._007512.job.log.1'
[2026-04-07 06:47:28] + for f in ./heartbeat.json ./output.list ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1 ./gmlog/
[2026-04-07 06:47:28] + '[' -e ./log.49263191._007512.job.log.1 ']'
[2026-04-07 06:47:28] + flist='*.diag  ./heartbeat.json ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1'
[2026-04-07 06:47:28] + for f in ./heartbeat.json ./output.list ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1 ./gmlog/
[2026-04-07 06:47:28] + '[' -e ./gmlog/ ']'
[2026-04-07 06:47:28] + '[' -f output.list ']'
[2026-04-07 06:47:28] + tar cvf result.tar.gz AEKMDmb0PR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmtQPKDm1VXXHm.diag ./heartbeat.json ./log.49263191._007512.job.log.1 ./log.49263191._007512.job.log.1
[2026-04-07 06:47:28] + '[' xgnutime = xcgroup ']'
[2026-04-07 06:47:28] + '[' -n '' ']'
[2026-04-07 06:47:28] + '[' -n '' ']'
[2026-04-07 06:47:28] ++ date +%s
[2026-04-07 06:47:28] + ACCOUNTING_ENDTIME=1775537248
[2026-04-07 06:47:28] ++ date -d '1970-01-01 UTC 1775537063 seconds' +%Y%m%d%H%M%SZ
[2026-04-07 06:47:28] + echo LRMSStartTime=20260407064423Z
[2026-04-07 06:47:28] ++ date -d '1970-01-01 UTC 1775537248 seconds' +%Y%m%d%H%M%SZ
[2026-04-07 06:47:28] + echo LRMSEndTime=20260407064728Z
[2026-04-07 06:47:28] + echo walltime=185
[2026-04-07 06:47:28] + echo exitcode=2
[2026-04-07 06:47:28] + exit 2
[2026-04-07 06:47:28] ./PanDA_Pilot-7072206812/pilotlog.txt
[2026-04-07 06:47:28] ./PanDA_Pilot-7072206812/prmon.log
[2026-04-07 06:47:28] ./PanDA_Pilot-7072206812/PoolFileCatalog.xml
[2026-04-07 06:47:28] ./PanDA_Pilot-7072206812/log.EVNTtoHITS
[2026-04-07 06:47:28] ./pilotlog.txt
[2026-04-07 06:47:28] ./log.49263191._007512.job.log.1
[2026-04-07 06:47:28] ./runtime_log.err
[2026-04-07 06:47:28] ./runtime_log
[2026-04-07 06:47:28] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-04-07 06:47:28] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-04-07 06:47:28] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-04-07 06:47:28] ./pilot3/pilot/util/realtimelogger.py
[2026-04-07 06:47:28] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-04-07 06:47:28] ./pilot3/pilot/util/loggingsupport.py
06:57:29 (2224324): run_atlas exited; CPU time 6.937659
06:57:29 (2224324): app exit status: 0x1
06:57:29 (2224324): called boinc_finish(195)

</stderr_txt>
]]>

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