Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-30 13:56:41 (5676): vboxwrapper version 26210
2026-03-30 13:56:41 (5676): BOINC client version: 8.2.8
2026-03-30 13:56:42 (5676): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-03-30 13:56:42 (5676): Successfully copied 'init_data.xml' to the shared directory.
2026-03-30 13:56:43 (5676): Create VM. (boinc_526cc067095400f7, slot#2)
2026-03-30 13:56:43 (5676): Setting Memory Size for VM. (4400MB)
2026-03-30 13:56:43 (5676): Setting CPU Count for VM. (4)
2026-03-30 13:56:44 (5676): Setting Chipset Options for VM.
2026-03-30 13:56:44 (5676): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-30 13:56:44 (5676): Setting Boot Options for VM.
2026-03-30 13:56:45 (5676): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-30 13:56:45 (5676): Enabling VM Network Access.
2026-03-30 13:56:45 (5676): Disabling USB Support for VM.
2026-03-30 13:56:46 (5676): Disabling COM Port Support for VM.
2026-03-30 13:56:46 (5676): Disabling LPT Port Support for VM.
2026-03-30 13:56:46 (5676): Disabling Audio Support for VM.
2026-03-30 13:56:46 (5676): Disabling Clipboard Support for VM.
2026-03-30 13:56:47 (5676): Disabling Drag and Drop Support for VM.
2026-03-30 13:56:47 (5676): Adding storage controller(s) to VM.
2026-03-30 13:56:47 (5676): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-30 13:56:49 (5676): Adding VirtualBox Guest Additions to VM.
2026-03-30 13:56:50 (5676): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-30 13:56:50 (5676): forwarding host port 60544 to guest port 80
2026-03-30 13:56:50 (5676): Enabling remote desktop for VM.
2026-03-30 13:56:50 (5676): Required extension pack not installed, remote desktop not enabled.
2026-03-30 13:56:50 (5676): Enabling shared directory for VM.
2026-03-30 13:56:51 (5676): Starting VM using VBoxManage interface. (boinc_526cc067095400f7, slot#2)
2026-03-30 13:56:56 (5676): Successfully started VM. (PID = '11192')
2026-03-30 13:56:56 (5676): Reporting VM Process ID to BOINC.
2026-03-30 13:56:56 (5676): Guest Log: BIOS: VirtualBox 7.2.4
2026-03-30 13:56:56 (5676): Guest Log: CPUID EDX: 0x178bfbff
2026-03-30 13:56:56 (5676): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-30 13:56:56 (5676): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-30 13:56:56 (5676): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-30 13:56:56 (5676): Detected: Web Application Enabled (http://localhost:60544)
2026-03-30 13:56:56 (5676): Preference change detected
2026-03-30 13:56:56 (5676): Setting CPU throttle for VM. (100%)
2026-03-30 13:56:56 (5676): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-30 13:56:58 (5676): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-30 13:56:58 (5676): Guest Log: BIOS: Booting from Hard Disk...
2026-03-30 13:57:01 (5676): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-30 13:57:01 (5676): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-30 13:57:01 (5676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-30 13:57:07 (5676): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-30 13:57:07 (5676): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-30 13:57:11 (5676): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-30 13:57:11 (5676): Guest Log: 00:00:00.000129 main     Log opened 2026-03-30T13:57:09.498036000Z
2026-03-30 13:57:11 (5676): Guest Log: 00:00:00.000215 main     OS Product: Linux
2026-03-30 13:57:11 (5676): Guest Log: 00:00:00.000237 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-30 13:57:11 (5676): Guest Log: 00:00:00.000276 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-30 13:57:11 (5676): Guest Log: 00:00:00.000311 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-30 13:57:11 (5676): Guest Log: 00:00:00.000312 main     Process ID: 1307
2026-03-30 13:57:11 (5676): Guest Log: 00:00:00.000312 main     Package type: LINUX_64BITS_GENERIC
2026-03-30 13:57:11 (5676): Guest Log: 00:00:00.000844 main     5.2.32 r132073 started. Verbose level = 0
2026-03-30 13:57:11 (5676): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-30 13:57:11 (5676): Guest Log: [INFO] Mounting shared directory
2026-03-30 13:57:11 (5676): Guest Log: [INFO] Checking for init_data.xml
2026-03-30 13:57:21 (5676): Guest Log: 00:00:10.014351 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 000 091 000ns (GuestNow=1 774 875 441 499 521 000 ns GuestLast=1 774 879 029 499 612 000 ns fSetTimeLastLoop=true )
2026-03-30 13:58:10 (5676): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-30 13:58:10 (5676): Guest Log: [INFO] Detected branch: prod
2026-03-30 13:58:11 (5676): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-30 13:58:11 (5676): Guest Log: Copying input files
2026-03-30 13:58:11 (5676): Guest Log: Copied input files into RunAtlas.
2026-03-30 13:58:11 (5676): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-30 13:58:11 (5676): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-30 13:58:11 (5676): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-30 13:58:11 (5676): Guest Log: Further information can be found at the LHC@home message board.
2026-03-30 13:58:19 (5676): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-30 13:58:20 (5676): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-30 13:58:20 (5676): Guest Log: 2.6.3.0 1605 0 32168 157881 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-30 13:58:20 (5676): Guest Log: copied the webapp to /var/www
2026-03-30 13:58:20 (5676): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-30 13:58:20 (5676): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-30 13:58:20 (5676): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-30 13:58:20 (5676): Guest Log:  *** Starting ATLAS job. (PandaID=7072187790 taskID=49263191) ***
2026-03-30 15:36:57 (5676): Status Report: Elapsed Time: '6000.000000'
2026-03-30 15:36:57 (5676): Status Report: CPU Time: '22152.718750'
2026-03-30 15:51:55 (5676): Guest Log:  *** Job finished ***
2026-03-30 15:51:55 (5676): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:47,289 | INFO     | PID=6001 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:47,289 | INFO     | found 0 job(s) in 20 queues
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:47,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:47,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:47,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:47,289 | INFO     | [monitor] control thread has ended
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,629 | INFO     | all workflow threads have been joined
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,629 | INFO     | end of generic workflow (traces error code: 0)
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,629 | INFO     | traces error code: 0
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,693 [wrapper] ==== pilot stdout END ====
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,696 [wrapper] ==== wrapper stdout RESUME ====
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,700 [wrapper] pilotpid: 6001
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,703 [wrapper] Pilot exit status: 0
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,907 [wrapper] pandaids: 7072187790
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,926 [wrapper] cleanup supervisor_pilot 25821 6002
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,930 [wrapper] Test setup, not cleaning
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,934 [wrapper] apfmon messages muted
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,937 [wrapper] ==== wrapper stdout END ====
2026-03-30 15:51:55 (5676): Guest Log: 2026-03-30 14:51:51,940 [wrapper] ==== wrapper stderr END ====
2026-03-30 15:51:55 (5676): Guest Log:  *** Error codes and diagnostics ***
2026-03-30 15:51:55 (5676): Guest Log:     "exeErrorCode": 0,
2026-03-30 15:51:55 (5676): Guest Log:     "pilotErrorCode": 0,
2026-03-30 15:51:55 (5676): Guest Log:  *** Listing of results directory ***
2026-03-30 15:51:55 (5676): Guest Log: total 193256
2026-03-30 15:51:55 (5676): Guest Log: -rw-r--r--. 1 atlas atlas    644034 Mar 30 10:21 pilot3.tar.gz
2026-03-30 15:51:55 (5676): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Mar 30 10:21 queuedata.json
2026-03-30 15:51:55 (5676): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 30 10:21 runpilot2-wrapper.sh
2026-03-30 15:51:55 (5676): Guest Log: -rwxr-xr-x. 1 atlas atlas      9428 Mar 30 12:58 init_data.xml
2026-03-30 15:51:55 (5676): Guest Log: -rwxr-xr-x. 1 atlas atlas    656745 Mar 30 12:58 input.tar.gz
2026-03-30 15:51:55 (5676): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 30 12:58 start_atlas.sh
2026-03-30 15:51:55 (5676): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 30 12:58 EVNT.49263189._000182.pool.root.1 -> /data/./ATLAS.root_0
2026-03-30 15:51:55 (5676): Guest Log: -rw-r--r--. 1 atlas atlas      2575 Mar 30 12:58 pandaJob.out
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas   1003985 Mar 30 12:59 agis_schedconf.cvmfs.json
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 30 12:59 agis_ddmendpoints.agis.ALL.json
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas       420 Mar 30 12:59 workernode_map.json
2026-03-30 15:51:55 (5676): Guest Log: drwx------. 5 atlas atlas      4096 Mar 30 12:59 pilot3
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas 192086288 Mar 30 14:50 HITS.49263191._006421.pool.root.1
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas      1024 Mar 30 14:51 memory_monitor_summary.json
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas        95 Mar 30 14:51 pilot_heartbeat.json
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas    271201 Mar 30 14:51 log.49263191._006421.job.log.tgz.1
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas      6348 Mar 30 14:51 heartbeat_new.json
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas      6239 Mar 30 14:51 heartbeat.json
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas      4872 Mar 30 14:51 pilotlog.txt
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas    633661 Mar 30 14:51 log.49263191._006421.job.log.1
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas       357 Mar 30 14:51 output.list
2026-03-30 15:51:55 (5676): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 30 14:51 runtime_log
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas    921600 Mar 30 14:51 result.tar.gz
2026-03-30 15:51:55 (5676): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Mar 30 14:51 runtime_log.err
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas       649 Mar 30 14:51 O0DMDmcvOR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmzCNKDmMdJIen.diag
2026-03-30 15:51:55 (5676): Guest Log: Looking for outputfile HITS.49263191._006421.pool.root.1
2026-03-30 15:51:55 (5676): Guest Log: HITS file was successfully produced
2026-03-30 15:51:55 (5676): Guest Log: -rw-------. 1 atlas atlas 192086288 Mar 30 14:50 /home/atlas/RunAtlas/HITS.49263191._006421.pool.root.1
2026-03-30 15:51:56 (5676): Guest Log: Successfully finished the ATLAS job!
2026-03-30 15:51:56 (5676): Guest Log: Copying the results back to the shared directory!
2026-03-30 15:51:56 (5676): Guest Log:  *** Contents of shared directory: ***
2026-03-30 15:51:56 (5676): Guest Log: total 410180
2026-03-30 15:51:56 (5676): Guest Log: -rwxrwxrwx. 1 root root 226323907 Mar 30 12:56 ATLAS.root_0
2026-03-30 15:51:56 (5676): Guest Log: -rwxrwxrwx. 1 root root 192086288 Mar 30  2026 HITS.pool.root.1
2026-03-30 15:51:56 (5676): Guest Log: -rwxrwxrwx. 1 root root      9428 Mar 30 12:56 init_data.xml
2026-03-30 15:51:56 (5676): Guest Log: -rwxrwxrwx. 1 root root    656745 Mar 30 12:41 input.tar.gz
2026-03-30 15:51:56 (5676): Guest Log: -rwxrwxrwx. 1 root root    921600 Mar 30  2026 result.tar.gz
2026-03-30 15:51:56 (5676): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 30 12:41 start_atlas.sh
2026-03-30 15:51:56 (5676): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-30 15:51:56 (5676): VM Completion File Detected.
2026-03-30 15:51:56 (5676): Powering off VM.
2026-03-30 15:51:57 (5676): Successfully stopped VM.
2026-03-30 15:51:57 (5676): Deregistering VM. (boinc_526cc067095400f7, slot#2)
2026-03-30 15:51:57 (5676): Removing network bandwidth throttle group from VM.
2026-03-30 15:51:57 (5676): Removing VM from VirtualBox.
2026-03-30 15:52:02 (5676): called boinc_finish(0)

</stderr_txt>
]]>

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