Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:06:12 (3240223): wrapper (7.7.26015): starting
13:06:12 (3240223): wrapper: running run_atlas (--nthreads 12)
[2026-04-05 13:06:12] Arguments: --nthreads 12
[2026-04-05 13:06:12] Threads: 12
[2026-04-05 13:06:12] Checking for CVMFS
[2026-04-05 13:06:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 13:06:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 13:06:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 13:06:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 13:06:14] 2.13.3.0 3021178 16233 72292 158112 2 188 4082009 4096000 12079 130560 0 79447453 99.987 977942 2231 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-05 13:06:14] CVMFS is ok
[2026-04-05 13:06:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 13:06:14] Checking for apptainer binary...
[2026-04-05 13:06:14] apptainer is not installed, using version from CVMFS
[2026-04-05 13:06:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 13:06:15] epyc7v12
[2026-04-05 13:06:15] apptainer works
[2026-04-05 13:06:15] Set ATHENA_PROC_NUMBER=12
[2026-04-05 13:06:15] Set ATHENA_CORE_NUMBER=12
[2026-04-05 13:06:15] Starting ATLAS job with PandaID=7072187295
[2026-04-05 13:06:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31428/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 14:30:15]  *** The last 200 lines of the pilot log: ***
[2026-04-05 14:30:15]  filesize=358993
[2026-04-05 14:30:15]  filetype=log
[2026-04-05 14:30:15]  guid=798f02d1-1386-46ba-9b17-90adb23a5ad1
[2026-04-05 14:30:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-05 14:30:15]  is_altstaged=None
[2026-04-05 14:30:15]  is_tar=False
[2026-04-05 14:30:15]  lfn=log.49263191._006131.job.log.tgz.1
[2026-04-05 14:30:15]  mtime=0
[2026-04-05 14:30:15]  protocol_id=None
[2026-04-05 14:30:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-05 14:30:15]  replicas=None
[2026-04-05 14:30:15]  scope=mc23_13p6TeV
[2026-04-05 14:30:15]  status=None
[2026-04-05 14:30:15]  status_code=0
[2026-04-05 14:30:15]  storage_token=
[2026-04-05 14:30:15]  surl=/opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072187295/log.49263191._006131.job.log.tgz.1
[2026-04-05 14:30:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/f6/log.49263191._006131.job.log.tgz.1
[2026-04-05 14:30:15]  workdir=None
[2026-04-05 14:30:15] ]
[2026-04-05 14:30:15] 2026-04-05 14:29:09,756 | INFO     | transferring file log.49263191._006131.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072187295/log.49263191._006131.job.log.tgz.1 t
[2026-04-05 14:30:15] 2026-04-05 14:29:09,756 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072187295/log.49263191._006131.job.log.tgz.1 /opt/boinc/instance_home
[2026-04-05 14:30:15] 2026-04-05 14:29:09,790 | INFO     | adding to output.list: log.49263191._006131.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/f6/log.49263191._006131.job.log.tg
[2026-04-05 14:30:15] 2026-04-05 14:29:09,791 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-05 14:30:15] 2026-04-05 14:29:09,791 | INFO     | summary of transferred files:
[2026-04-05 14:30:15] 2026-04-05 14:29:09,791 | INFO     |  -- lfn=log.49263191._006131.job.log.tgz.1, status_code=0, status=transferred
[2026-04-05 14:30:15] 2026-04-05 14:29:09,791 | INFO     | stage-out finished correctly
[2026-04-05 14:30:15] 2026-04-05 14:29:09,897 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-05 14:30:15] 2026-04-05 14:29:10,582 | INFO     | job 7072187295 has state=finished
[2026-04-05 14:30:15] 2026-04-05 14:29:10,583 | INFO     | preparing for final server update for job 7072187295 in state='finished'
[2026-04-05 14:30:15] 2026-04-05 14:29:10,583 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072187295/jobReport.json
[2026-04-05 14:30:15] 2026-04-05 14:29:10,586 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31428/slots/0/workernode_map.json
[2026-04-05 14:30:15] 2026-04-05 14:29:10,586 | INFO     | this job has now completed (state=finished)
[2026-04-05 14:30:15] 2026-04-05 14:29:10,586 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 14:30:15] 2026-04-05 14:29:10,586 | INFO     | log transfer has been attempted: DONE
[2026-04-05 14:30:15] 2026-04-05 14:29:10,586 | INFO     | job 7072187295 has finished - writing final server update
[2026-04-05 14:30:15] 2026-04-05 14:29:10,587 | INFO     | total number of processed events: 400 (read)
[2026-04-05 14:30:15] 2026-04-05 14:29:10,614 | INFO     | using path: /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072187295/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 14:30:15] 2026-04-05 14:29:10,615 | INFO     | extracted standard info from prmon json
[2026-04-05 14:30:15] 2026-04-05 14:29:10,615 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 14:30:15] 2026-04-05 14:29:10,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 14:30:15] 2026-04-05 14:29:10,615 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 14:30:15] 2026-04-05 14:29:10,617 | INFO     | fitting pss+swap vs Time
[2026-04-05 14:30:15] 2026-04-05 14:29:10,617 | INFO     | sum of square deviations: 125630262.5
[2026-04-05 14:30:15] 2026-04-05 14:29:10,618 | INFO     | sum of deviations: 2996775639.5
[2026-04-05 14:30:15] 2026-04-05 14:29:10,618 | INFO     | mean x (centered): 0.0
[2026-04-05 14:30:15] 2026-04-05 14:29:10,618 | INFO     | mean y: 2656375.2837837837
[2026-04-05 14:30:15] 2026-04-05 14:29:10,618 | INFO     | intersect: 2656375.2837837837
[2026-04-05 14:30:15] 2026-04-05 14:29:10,618 | INFO     | chi2: 0.07558285027924964
[2026-04-05 14:30:15] 2026-04-05 14:29:10,618 | INFO     | current memory leak: 23.85 B/s (using 74 data points, chi2=0.08)
[2026-04-05 14:30:15] 2026-04-05 14:29:10,619 | INFO     | could have reported an average CPU frequency of 2384 MHz (6 samples)
[2026-04-05 14:30:15] 2026-04-05 14:29:10,619 | INFO     | ..............................
[2026-04-05 14:30:15] 2026-04-05 14:29:10,619 | INFO     | . Timing measurements:
[2026-04-05 14:30:15] 2026-04-05 14:29:10,619 | INFO     | . get job = 0 s
[2026-04-05 14:30:15] 2026-04-05 14:29:10,619 | INFO     | . initial setup = 16 s
[2026-04-05 14:30:15] 2026-04-05 14:29:10,619 | INFO     | . payload setup = 26 s
[2026-04-05 14:30:15] 2026-04-05 14:29:10,619 | INFO     | . stage-in = 0 s
[2026-04-05 14:30:15] 2026-04-05 14:29:10,619 | INFO     | . payload execution = 4896 s
[2026-04-05 14:30:15] 2026-04-05 14:29:10,620 | INFO     | . stage-out = 0 s
[2026-04-05 14:30:15] 2026-04-05 14:29:10,620 | INFO     | . log creation = 0 s
[2026-04-05 14:30:15] 2026-04-05 14:29:10,620 | INFO     | ..............................
[2026-04-05 14:30:15] 2026-04-05 14:29:10,723 | INFO     | 
[2026-04-05 14:30:15] 2026-04-05 14:29:10,724 | INFO     | job summary report
[2026-04-05 14:30:15] 2026-04-05 14:29:10,724 | INFO     | --------------------------------------------------
[2026-04-05 14:30:15] 2026-04-05 14:29:10,724 | INFO     | PanDA job id: 7072187295
[2026-04-05 14:30:15] 2026-04-05 14:29:10,724 | INFO     | task id: 49263191
[2026-04-05 14:30:15] 2026-04-05 14:29:10,724 | INFO     | errors: (none)
[2026-04-05 14:30:15] 2026-04-05 14:29:10,724 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 14:30:15] 2026-04-05 14:29:10,724 | INFO     | pilot state: finished 
[2026-04-05 14:30:15] 2026-04-05 14:29:10,724 | INFO     | transexitcode: 0
[2026-04-05 14:30:15] 2026-04-05 14:29:10,724 | INFO     | exeerrorcode: 0
[2026-04-05 14:30:15] 2026-04-05 14:29:10,724 | INFO     | exeerrordiag: 
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | exitcode: 0
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | exitmsg: OK
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | cpuconsumptiontime: 47711 s
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | nevents: 400
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | neventsw: 0
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | pid: 3259227
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | pgrp: 3259227
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | corecount: 12
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | event service: False
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | sizes: {0: 2279755, 1: 2279839, 2: 2281668, 4926: 2308028, 4928: 2317128, 4929: 2317266}
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | --------------------------------------------------
[2026-04-05 14:30:15] 2026-04-05 14:29:10,725 | INFO     | 
[2026-04-05 14:30:15] 2026-04-05 14:29:10,726 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-04-05 14:30:15] 2026-04-05 14:29:10,759 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,760 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,760 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,760 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,762 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 14:30:15] 2026-04-05 14:29:10,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,762 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 14:30:15] 2026-04-05 14:29:10,762 | INFO     | job 7072187295 has completed (purged errors)
[2026-04-05 14:30:15] 2026-04-05 14:29:10,762 | INFO     | overall cleanup function is called
[2026-04-05 14:30:15] 2026-04-05 14:29:11,771 | INFO     | --- collectZombieJob: --- 10, [3259227]
[2026-04-05 14:30:15] 2026-04-05 14:29:11,771 | INFO     | zombie collector waiting for pid 3259227
[2026-04-05 14:30:15] 2026-04-05 14:29:11,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 14:30:15] 2026-04-05 14:29:11,772 | INFO     | collected zombie processes
[2026-04-05 14:30:15] 2026-04-05 14:29:11,772 | INFO     | will attempt to kill all subprocesses of pid=3259227
[2026-04-05 14:30:15] 2026-04-05 14:29:12,059 | WARNING  | process 3259227 can no longer be monitored (due to stat problems) - aborting
[2026-04-05 14:30:15] 2026-04-05 14:29:13,056 | INFO     | using path: /opt/boinc/instance_homes/boinc_31428/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 14:30:15] 2026-04-05 14:29:13,172 | INFO     | process IDs to be killed: [3259227] (in reverse order)
[2026-04-05 14:30:15] 2026-04-05 14:29:13,406 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 14:30:15] 2026-04-05 14:29:13,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 14:30:15] 2026-04-05 14:29:13,445 | INFO     | did not find any defunct processes belonging to 3259227
[2026-04-05 14:30:15] 2026-04-05 14:29:13,528 | INFO     | did not find any defunct processes belonging to 3259227
[2026-04-05 14:30:15] 2026-04-05 14:29:13,529 | INFO     | Ready for new job
[2026-04-05 14:30:15] 2026-04-05 14:29:13,531 | INFO     | **************************************
[2026-04-05 14:30:15] 2026-04-05 14:29:13,531 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-05 14:30:15] 2026-04-05 14:29:13,531 | INFO     | **************************************
[2026-04-05 14:30:15] 2026-04-05 14:29:13,531 | INFO     | 
[2026-04-05 14:30:15] 2026-04-05 14:29:13,542 | INFO     | architecture information:
[2026-04-05 14:30:15] 2026-04-05 14:29:13,544 | INFO     | executing command: cat /etc/os-release
[2026-04-05 14:30:15] 2026-04-05 14:29:13,570 | INFO     | cat /etc/os-release:
[2026-04-05 14:30:15] NAME="CentOS Linux"
[2026-04-05 14:30:15] VERSION="7 (Core)"
[2026-04-05 14:30:15] ID="centos"
[2026-04-05 14:30:15] ID_LIKE="rhel fedora"
[2026-04-05 14:30:15] VERSION_ID="7"
[2026-04-05 14:30:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 14:30:15] ANSI_COLOR="0;31"
[2026-04-05 14:30:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 14:30:15] HOME_URL="https://www.centos.org/"
[2026-04-05 14:30:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 14:30:15] 
[2026-04-05 14:30:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 14:30:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 14:30:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 14:30:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 14:30:15] 
[2026-04-05 14:30:15] 2026-04-05 14:29:13,570 | INFO     | **************************************
[2026-04-05 14:30:15] 2026-04-05 14:29:13,755 | INFO     | number of running child processes to parent process 3259227: 1
[2026-04-05 14:30:15] 2026-04-05 14:29:13,756 | INFO     | maximum number of monitored processes: 6
[2026-04-05 14:30:15] 2026-04-05 14:29:13,756 | INFO     | aborting job monitoring since job object (job id=7072187295) has expired
[2026-04-05 14:30:15] 2026-04-05 14:29:14,073 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-04-05 14:30:15] 2026-04-05 14:29:14,101 | INFO     | sufficient remaining disk space (403850657792 B)
[2026-04-05 14:30:15] 2026-04-05 14:29:14,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 14:30:15] 2026-04-05 14:29:14,101 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 14:30:15] 2026-04-05 14:29:14,101 | INFO     | update_server=False
[2026-04-05 14:30:15] 2026-04-05 14:29:14,102 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-05 14:30:15] 2026-04-05 14:29:14,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 14:30:15] 2026-04-05 14:29:14,102 | INFO     | will abort loop
[2026-04-05 14:30:15] 2026-04-05 14:29:14,662 | INFO     | all data control threads have been joined
[2026-04-05 14:30:15] 2026-04-05 14:29:15,068 | INFO     | all payload control threads have been joined
[2026-04-05 14:30:15] 2026-04-05 14:29:15,107 | INFO     | [job] job monitor thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:15,108 | INFO     | [job] retrieve thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:15,260 | INFO     | all job control threads have been joined
[2026-04-05 14:30:15] 2026-04-05 14:29:15,291 | INFO     | [data] copytool_in thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:15,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 14:30:15] 2026-04-05 14:29:15,515 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:15,571 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:15,667 | INFO     | [data] control thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:15,720 | INFO     | [job] validate thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:15,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 14:30:15] 2026-04-05 14:29:16,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 14:30:15] 2026-04-05 14:29:16,049 | INFO     | [payload] validate_post thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:16,073 | INFO     | [payload] control thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:16,106 | INFO     | [payload] failed_post thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:16,265 | INFO     | [job] control thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:16,268 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:16,739 | INFO     | [job] queue monitor thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:17,410 | INFO     | [data] copytool_out thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:20,013 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:24,376 | INFO     | job.realtimelogging is not enabled
[2026-04-05 14:30:15] 2026-04-05 14:29:25,381 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 14:30:15] 2026-04-05 14:29:43,659 | INFO     | PID=3248990 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-05 14:30:15] 2026-04-05 14:29:43,659 | INFO     | .. there are 12 such processes running
[2026-04-05 14:30:15] 2026-04-05 14:29:43,659 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 14:30:15] 2026-04-05 14:29:43,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 14:30:15] 2026-04-05 14:29:43,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 14:30:15] 2026-04-05 14:30:07,686 | INFO     | [monitor] cgroup control has ended
[2026-04-05 14:30:15] 2026-04-05 14:30:09,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124262886893376)>', '<ExcThread(monitor, started 124262060914432)>']
[2026-04-05 14:30:15] 2026-04-05 14:30:09,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 14:30:15] 2026-04-05 14:30:09,791 | INFO     | [monitor] control thread has ended
[2026-04-05 14:30:15] 2026-04-05 14:30:14,725 | INFO     | all workflow threads have been joined
[2026-04-05 14:30:15] 2026-04-05 14:30:14,725 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 14:30:15] 2026-04-05 14:30:14,726 | INFO     | traces error code: 0
[2026-04-05 14:30:15] 2026-04-05 14:30:14,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 14:30:15] 2026-04-05 14:30:14,868 [wrapper] ==== pilot stdout END ====
[2026-04-05 14:30:15] 2026-04-05 14:30:14,873 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 14:30:15] 2026-04-05 14:30:14,877 [wrapper] pilotpid: 3248990
[2026-04-05 14:30:15] 2026-04-05 14:30:14,882 [wrapper] Pilot exit status: 0
[2026-04-05 14:30:15] 2026-04-05 14:30:14,901 [wrapper] pandaids: 7072187295
[2026-04-05 14:30:15] 2026-04-05 14:30:15,018 [wrapper] cleanup supervisor_pilot 3367034 3248991
[2026-04-05 14:30:15] 2026-04-05 14:30:15,023 [wrapper] Test setup, not cleaning
[2026-04-05 14:30:15] 2026-04-05 14:30:15,027 [wrapper] apfmon messages muted
[2026-04-05 14:30:15] 2026-04-05 14:30:15,032 [wrapper] ==== wrapper stdout END ====
[2026-04-05 14:30:15] 2026-04-05 14:30:15,037 [wrapper] ==== wrapper stderr END ====
[2026-04-05 14:30:15]  *** Error codes and diagnostics ***
[2026-04-05 14:30:15]     "exeErrorCode": 0,
[2026-04-05 14:30:15]     "pilotErrorCode": 0,
[2026-04-05 14:30:15]  *** Listing of results directory ***
[2026-04-05 14:30:15] total 416780
[2026-04-05 14:30:15] -rw-r--r-- 1 boinc boinc    644034 Mar 30 10:21 pilot3.tar.gz
[2026-04-05 14:30:15] -rw-r--r-- 1 boinc boinc      5118 Mar 30 10:21 queuedata.json
[2026-04-05 14:30:15] -rwx------ 1 boinc boinc     36322 Mar 30 10:21 runpilot2-wrapper.sh
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc       100 Apr  5 13:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 14:30:15] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 13:06 run_atlas
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc       105 Apr  5 13:06 job.xml
[2026-04-05 14:30:15] -rw-r--r-- 2 boinc boinc 222634967 Apr  5 13:06 EVNT.49263189._000171.pool.root.1
[2026-04-05 14:30:15] -rw-r--r-- 2 boinc boinc     15845 Apr  5 13:06 start_atlas.sh
[2026-04-05 14:30:15] drwxrwx--x 2 boinc boinc      4096 Apr  5 13:06 shared
[2026-04-05 14:30:15] -rw-r--r-- 2 boinc boinc    656754 Apr  5 13:06 input.tar.gz
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc         0 Apr  5 13:06 boinc_setup_complete
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc      6555 Apr  5 13:06 init_data.xml
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc         0 Apr  5 13:06 boinc_lockfile
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc      2575 Apr  5 13:06 pandaJob.out
[2026-04-05 14:30:15] -rw------- 1 boinc boinc   1005096 Apr  5 13:06 agis_schedconf.cvmfs.json
[2026-04-05 14:30:15] -rw------- 1 boinc boinc   1511579 Apr  5 13:06 agis_ddmendpoints.agis.ALL.json
[2026-04-05 14:30:15] -rw------- 1 boinc boinc       420 Apr  5 13:06 workernode_map.json
[2026-04-05 14:30:15] drwx------ 5 boinc boinc      4096 Apr  5 13:07 pilot3
[2026-04-05 14:30:15] -rw------- 1 boinc boinc 198391916 Apr  5 14:28 HITS.49263191._006131.pool.root.1
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc       529 Apr  5 14:28 boinc_task_state.xml
[2026-04-05 14:30:15] -rw------- 1 boinc boinc      1020 Apr  5 14:29 memory_monitor_summary.json
[2026-04-05 14:30:15] -rw------- 1 boinc boinc    358993 Apr  5 14:29 log.49263191._006131.job.log.tgz.1
[2026-04-05 14:30:15] -rw------- 1 boinc boinc      6289 Apr  5 14:29 heartbeat_new.json
[2026-04-05 14:30:15] -rw------- 1 boinc boinc      6180 Apr  5 14:29 heartbeat.json
[2026-04-05 14:30:15] -rw------- 1 boinc boinc        95 Apr  5 14:29 pilot_heartbeat.json
[2026-04-05 14:30:15] -rw------- 1 boinc boinc      5206 Apr  5 14:30 pilotlog.txt
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc        27 Apr  5 14:30 wrapper_checkpoint.txt
[2026-04-05 14:30:15] -rw------- 1 boinc boinc    486924 Apr  5 14:30 log.49263191._006131.job.log.1
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc      8192 Apr  5 14:30 boinc_mmap_file
[2026-04-05 14:30:15] -rw------- 1 boinc boinc       357 Apr  5 14:30 output.list
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc       620 Apr  5 14:30 runtime_log
[2026-04-05 14:30:15] -rw------- 1 boinc boinc    860160 Apr  5 14:30 result.tar.gz
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc      9166 Apr  5 14:30 runtime_log.err
[2026-04-05 14:30:15] -rw------- 1 boinc boinc       652 Apr  5 14:30 bTCODmPvOR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmpBNKDmDUQ7Pm.diag
[2026-04-05 14:30:15] -rw-rw-r-- 1 boinc boinc     21014 Apr  5 14:30 stderr.txt
[2026-04-05 14:30:15] HITS file was successfully produced:
[2026-04-05 14:30:15] -rw------- 1 boinc boinc 198391916 Apr  5 14:28 shared/HITS.pool.root.1
[2026-04-05 14:30:15]  *** Contents of shared directory: ***
[2026-04-05 14:30:15] total 412672
[2026-04-05 14:30:15] -rw-r--r-- 2 boinc boinc 222634967 Apr  5 13:06 ATLAS.root_0
[2026-04-05 14:30:15] -rw-r--r-- 2 boinc boinc     15845 Apr  5 13:06 start_atlas.sh
[2026-04-05 14:30:15] -rw-r--r-- 2 boinc boinc    656754 Apr  5 13:06 input.tar.gz
[2026-04-05 14:30:15] -rw------- 1 boinc boinc 198391916 Apr  5 14:28 HITS.pool.root.1
[2026-04-05 14:30:15] -rw------- 1 boinc boinc    860160 Apr  5 14:30 result.tar.gz
14:30:16 (3240223): run_atlas exited; CPU time 47958.401571
14:30:16 (3240223): called boinc_finish(0)

</stderr_txt>
]]>

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