Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:28:17 (3788682): wrapper (7.7.26015): starting
02:28:17 (3788682): wrapper: running run_atlas (--nthreads 4)
[2026-04-03 02:28:17] Arguments: --nthreads 4
[2026-04-03 02:28:17] Threads: 4
[2026-04-03 02:28:17] Checking for CVMFS
[2026-04-03 02:28:17] No cvmfs_config command found, will try listing directly
[2026-04-03 02:28:17] CVMFS is ok
[2026-04-03 02:28:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 02:28:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 02:28:17] Further information can be found at the LHC@home message board.
[2026-04-03 02:28:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 02:28:17] Checking for apptainer binary...
[2026-04-03 02:28:17] which: no apptainer in ((null))
[2026-04-03 02:28:17] apptainer is not installed, using version from CVMFS
[2026-04-03 02:28:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 02:28:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-04-03 02:28:17] apptainer works
[2026-04-03 02:28:17] Set ATHENA_PROC_NUMBER=4
[2026-04-03 02:28:17] Set ATHENA_CORE_NUMBER=4
[2026-04-03 02:28:17] Starting ATLAS job with PandaID=7072075873
[2026-04-03 02:28:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 05:16:05]  *** The last 200 lines of the pilot log: ***
[2026-04-03 05:16:05] 2026-04-03 03:15:07,665 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-03 05:16:05] 2026-04-03 03:15:07,774 | INFO     | job 7072075873 has state=finished
[2026-04-03 05:16:05] 2026-04-03 03:15:07,774 | INFO     | preparing for final server update for job 7072075873 in state='finished'
[2026-04-03 05:16:05] 2026-04-03 03:15:07,774 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7072075873/jobReport.json
[2026-04-03 05:16:05] 2026-04-03 03:15:07,777 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/0/workernode_map.json
[2026-04-03 05:16:05] 2026-04-03 03:15:07,777 | INFO     | this job has now completed (state=finished)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,778 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,778 | INFO     | log transfer has been attempted: DONE
[2026-04-03 05:16:05] 2026-04-03 03:15:07,778 | INFO     | job 7072075873 has finished - writing final server update
[2026-04-03 05:16:05] 2026-04-03 03:15:07,778 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3502004/.job.ad'
[2026-04-03 05:16:05] 2026-04-03 03:15:07,778 | INFO     | total number of processed events: 400 (read)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,802 | INFO     | using path: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7072075873/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,803 | INFO     | extracted standard info from prmon json
[2026-04-03 05:16:05] 2026-04-03 03:15:07,803 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 05:16:05] 2026-04-03 03:15:07,803 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-03 05:16:05] 2026-04-03 03:15:07,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 05:16:05] 2026-04-03 03:15:07,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 05:16:05] 2026-04-03 03:15:07,807 | INFO     | fitting pss+swap vs Time
[2026-04-03 05:16:05] 2026-04-03 03:15:07,807 | INFO     | sum of square deviations: 1342841922.0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,808 | INFO     | sum of deviations: 8019165651.999998
[2026-04-03 05:16:05] 2026-04-03 03:15:07,808 | INFO     | mean x: 1775181101.0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,808 | INFO     | mean y: 2328584.8957055216
[2026-04-03 05:16:05] 2026-04-03 03:15:07,809 | INFO     | intersect: -10598674465.423674
[2026-04-03 05:16:05] 2026-04-03 03:15:07,809 | INFO     | chi2: 1.381127694008346
[2026-04-03 05:16:05] 2026-04-03 03:15:07,809 | INFO     | sum of square deviations: 1223016419.5
[2026-04-03 05:16:05] 2026-04-03 03:15:07,810 | INFO     | sum of deviations: 7804046925.500005
[2026-04-03 05:16:05] 2026-04-03 03:15:07,810 | INFO     | mean x: 1775180948.5
[2026-04-03 05:16:05] 2026-04-03 03:15:07,810 | INFO     | mean y: 2328311.0443037977
[2026-04-03 05:16:05] 2026-04-03 03:15:07,810 | INFO     | intersect: -11325071061.902224
[2026-04-03 05:16:05] 2026-04-03 03:15:07,811 | INFO     | chi2: 1.3822078898028758
[2026-04-03 05:16:05] 2026-04-03 03:15:07,811 | INFO     | current chi2=1.3822078898028758 (change=-0.07821114580614333 %)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,811 | INFO     | right removable region: 157
[2026-04-03 05:16:05] 2026-04-03 03:15:07,811 | INFO     | sum of square deviations: 1223016419.5
[2026-04-03 05:16:05] 2026-04-03 03:15:07,812 | INFO     | sum of deviations: -12436664811.0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,812 | INFO     | mean x: 1775181253.5
[2026-04-03 05:16:05] 2026-04-03 03:15:07,812 | INFO     | mean y: 2354181.7848101268
[2026-04-03 05:16:05] 2026-04-03 03:15:07,812 | INFO     | intersect: 18053897788.677753
[2026-04-03 05:16:05] 2026-04-03 03:15:07,812 | INFO     | chi2: 0.019975557869274935
[2026-04-03 05:16:05] 2026-04-03 03:15:07,813 | INFO     | current chi2=0.019975557869274935 (change=98.55367769715042 %)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,813 | INFO     | sum of square deviations: 1110539892.0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,814 | INFO     | sum of deviations: -10713697485.000004
[2026-04-03 05:16:05] 2026-04-03 03:15:07,814 | INFO     | mean x: 1775181406.0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,814 | INFO     | mean y: 2351848.751633987
[2026-04-03 05:16:05] 2026-04-03 03:15:07,814 | INFO     | intersect: 17128037023.941154
[2026-04-03 05:16:05] 2026-04-03 03:15:07,814 | INFO     | chi2: 0.019277647333870097
[2026-04-03 05:16:05] 2026-04-03 03:15:07,814 | INFO     | current chi2=0.019277647333870097 (change=3.4938225003383625 %)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,814 | INFO     | left removable region: 20
[2026-04-03 05:16:05] 2026-04-03 03:15:07,815 | INFO     | sum of square deviations: 797291228.0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,815 | INFO     | sum of deviations: -6392061534.000001
[2026-04-03 05:16:05] 2026-04-03 03:15:07,816 | INFO     | mean x: 1775181528.0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,816 | INFO     | mean y: 2346105.9197080294
[2026-04-03 05:16:05] 2026-04-03 03:15:07,816 | INFO     | intersect: 14234372199.39649
[2026-04-03 05:16:05] 2026-04-03 03:15:07,816 | INFO     | chi2: 0.013725463151084857
[2026-04-03 05:16:05] 2026-04-03 03:15:07,816 | INFO     | current memory leak: -8.02 B/s (using 137 data points, chi2=0.01)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,816 | INFO     | could have reported an average CPU frequency of 2679 MHz (9 samples)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,817 | INFO     | ..............................
[2026-04-03 05:16:05] 2026-04-03 03:15:07,817 | INFO     | . Timing measurements:
[2026-04-03 05:16:05] 2026-04-03 03:15:07,817 | INFO     | . get job = 0 s
[2026-04-03 05:16:05] 2026-04-03 03:15:07,817 | INFO     | . initial setup = 9 s
[2026-04-03 05:16:05] 2026-04-03 03:15:07,817 | INFO     | . payload setup = 16 s
[2026-04-03 05:16:05] 2026-04-03 03:15:07,817 | INFO     | . stage-in = 0 s
[2026-04-03 05:16:05] 2026-04-03 03:15:07,817 | INFO     | . payload execution = 9948 s
[2026-04-03 05:16:05] 2026-04-03 03:15:07,817 | INFO     | . stage-out = 0 s
[2026-04-03 05:16:05] 2026-04-03 03:15:07,817 | INFO     | . log creation = 0 s
[2026-04-03 05:16:05] 2026-04-03 03:15:07,817 | INFO     | ..............................
[2026-04-03 05:16:05] 2026-04-03 03:15:07,910 | INFO     | 
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | job summary report
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | --------------------------------------------------
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | PanDA job id: 7072075873
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | task id: 49263191
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | errors: (none)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | pilot state: finished 
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | transexitcode: 0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | exeerrorcode: 0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | exeerrordiag: 
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | exitcode: 0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,911 | INFO     | exitmsg: OK
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | cpuconsumptiontime: 38128 s
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | nevents: 400
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | neventsw: 0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | pid: 3808123
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | pgrp: 3808123
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | corecount: 4
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | event service: False
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | sizes: {0: 2279828, 1: 2280289, 12: 2280289, 9968: 2309414, 9969: 2318434, 9972: 2318876}
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | --------------------------------------------------
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | 
[2026-04-03 05:16:05] 2026-04-03 03:15:07,912 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/0
[2026-04-03 05:16:05] 2026-04-03 03:15:07,946 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,946 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,946 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,946 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,948 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 05:16:05] 2026-04-03 03:15:07,948 | INFO     | job 7072075873 has completed (purged errors)
[2026-04-03 05:16:05] 2026-04-03 03:15:07,948 | INFO     | overall cleanup function is called
[2026-04-03 05:16:05] 2026-04-03 03:15:08,958 | INFO     | --- collectZombieJob: --- 10, [3808123]
[2026-04-03 05:16:05] 2026-04-03 03:15:08,958 | INFO     | zombie collector waiting for pid 3808123
[2026-04-03 05:16:05] 2026-04-03 03:15:08,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 05:16:05] 2026-04-03 03:15:08,959 | INFO     | collected zombie processes
[2026-04-03 05:16:05] 2026-04-03 03:15:08,959 | INFO     | will attempt to kill all subprocesses of pid=3808123
[2026-04-03 05:16:05] 2026-04-03 03:15:09,838 | INFO     | process IDs to be killed: [3808123] (in reverse order)
[2026-04-03 05:16:05] 2026-04-03 03:15:10,164 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 05:16:05] 2026-04-03 03:15:10,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 05:16:05] 2026-04-03 03:15:10,196 | INFO     | did not find any defunct processes belonging to 3808123
[2026-04-03 05:16:05] 2026-04-03 03:15:10,223 | INFO     | did not find any defunct processes belonging to 3808123
[2026-04-03 05:16:05] 2026-04-03 03:15:10,223 | INFO     | ready for new job
[2026-04-03 05:16:05] 2026-04-03 03:15:10,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 05:16:05] 2026-04-03 03:15:10,226 | INFO     | **************************************
[2026-04-03 05:16:05] 2026-04-03 03:15:10,226 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 05:16:05] 2026-04-03 03:15:10,226 | INFO     | **************************************
[2026-04-03 05:16:05] 2026-04-03 03:15:10,226 | INFO     | 
[2026-04-03 05:16:05] 2026-04-03 03:15:10,234 | INFO     | architecture information:
[2026-04-03 05:16:05] 2026-04-03 03:15:10,235 | INFO     | executing command: cat /etc/os-release
[2026-04-03 05:16:05] 2026-04-03 03:15:10,259 | INFO     | cat /etc/os-release:
[2026-04-03 05:16:05] NAME="CentOS Linux"
[2026-04-03 05:16:05] VERSION="7 (Core)"
[2026-04-03 05:16:05] ID="centos"
[2026-04-03 05:16:05] ID_LIKE="rhel fedora"
[2026-04-03 05:16:05] VERSION_ID="7"
[2026-04-03 05:16:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 05:16:05] ANSI_COLOR="0;31"
[2026-04-03 05:16:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 05:16:05] HOME_URL="https://www.centos.org/"
[2026-04-03 05:16:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 05:16:05] 
[2026-04-03 05:16:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 05:16:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 05:16:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 05:16:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 05:16:05] 
[2026-04-03 05:16:05] 2026-04-03 03:15:10,260 | INFO     | **************************************
[2026-04-03 05:16:05] 2026-04-03 03:15:10,762 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/0
[2026-04-03 05:16:05] 2026-04-03 03:15:10,786 | INFO     | sufficient remaining disk space (287059214336 B)
[2026-04-03 05:16:05] 2026-04-03 03:15:10,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 05:16:05] 2026-04-03 03:15:10,786 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 05:16:05] 2026-04-03 03:15:10,786 | INFO     | update_server=False
[2026-04-03 05:16:05] 2026-04-03 03:15:10,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 05:16:05] 2026-04-03 03:15:10,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 05:16:05] 2026-04-03 03:15:10,787 | INFO     | aborting loop
[2026-04-03 05:16:05] 2026-04-03 03:15:10,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 05:16:05] 2026-04-03 03:15:11,023 | INFO     | all data control threads have been joined
[2026-04-03 05:16:05] 2026-04-03 03:15:11,626 | INFO     | all payload control threads have been joined
[2026-04-03 05:16:05] 2026-04-03 03:15:11,791 | INFO     | [job] retrieve thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:11,792 | INFO     | [job] job monitor thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:11,818 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:11,919 | INFO     | [payload] validate_post thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:11,930 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:12,030 | INFO     | [data] control thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:12,047 | INFO     | all job control threads have been joined
[2026-04-03 05:16:05] 2026-04-03 03:15:12,176 | INFO     | [data] copytool_in thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:12,632 | INFO     | [payload] control thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:12,797 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:12,888 | INFO     | [payload] failed_post thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:12,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 05:16:05] 2026-04-03 03:15:12,930 | INFO     | [job] validate thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:12,981 | INFO     | [data] copytool_out thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:13,053 | INFO     | [job] control thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:13,285 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:13,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 05:16:05] 2026-04-03 03:15:13,926 | INFO     | [job] queue monitor thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:17,786 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 05:16:05] 2026-04-03 03:15:40,807 | INFO     | PID=3797205 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-03 05:16:05] 2026-04-03 03:15:40,809 | INFO     | .. there are 22 such processes running
[2026-04-03 05:16:05] 2026-04-03 03:15:40,810 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 05:16:05] 2026-04-03 03:15:40,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 05:16:05] 2026-04-03 03:15:40,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 05:16:05] 2026-04-03 03:16:00,218 | INFO     | [monitor] cgroup control has ended
[2026-04-03 05:16:05] 2026-04-03 03:16:00,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22612358555456)>', '<ExcThread(monitor, started 22612054882048)>']
[2026-04-03 05:16:05] 2026-04-03 03:16:00,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 05:16:05] 2026-04-03 03:16:00,907 | INFO     | [monitor] control thread has ended
[2026-04-03 05:16:05] 2026-04-03 03:16:05,276 | INFO     | all workflow threads have been joined
[2026-04-03 05:16:05] 2026-04-03 03:16:05,276 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 05:16:05] 2026-04-03 03:16:05,277 | INFO     | traces error code: 0
[2026-04-03 05:16:05] 2026-04-03 03:16:05,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 05:16:05] 2026-04-03 03:16:05,426 [wrapper] ==== pilot stdout END ====
[2026-04-03 05:16:05] 2026-04-03 03:16:05,431 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 05:16:05] 2026-04-03 03:16:05,435 [wrapper] pilotpid: 3797205
[2026-04-03 05:16:05] 2026-04-03 03:16:05,439 [wrapper] Pilot exit status: 0
[2026-04-03 05:16:05] 2026-04-03 03:16:05,454 [wrapper] pandaids: 7072075873
[2026-04-03 05:16:05] 2026-04-03 03:16:05,668 [wrapper] cleanup supervisor_pilot 4173836 3797206
[2026-04-03 05:16:05] 2026-04-03 03:16:05,671 [wrapper] Test setup, not cleaning
[2026-04-03 05:16:05] 2026-04-03 03:16:05,675 [wrapper] apfmon messages muted
[2026-04-03 05:16:05] 2026-04-03 03:16:05,679 [wrapper] ==== wrapper stdout END ====
[2026-04-03 05:16:05] 2026-04-03 03:16:05,682 [wrapper] ==== wrapper stderr END ====
[2026-04-03 05:16:05]  *** Error codes and diagnostics ***
[2026-04-03 05:16:05]     "exeErrorCode": 0,
[2026-04-03 05:16:05]     "exeErrorDiag": "",
[2026-04-03 05:16:05]     "pilotErrorCode": 0,
[2026-04-03 05:16:05]     "pilotErrorDiag": "",
[2026-04-03 05:16:05]  *** Listing of results directory ***
[2026-04-03 05:16:05] total 418756
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc    585013 Mar 30 04:42 pilot3.tar.gz
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc      5118 Mar 30 04:44 queuedata.json
[2026-04-03 05:16:05] -rwx------. 1 boinc boinc     36322 Mar 30 04:45 runpilot2-wrapper.sh
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc       100 Apr  3 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 05:16:05] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 02:28 run_atlas
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc       105 Apr  3 02:28 job.xml
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc      6622 Apr  3 02:28 init_data.xml
[2026-04-03 05:16:05] -rw-r--r--. 2 boinc boinc 223488894 Apr  3 02:28 EVNT.49263189._000113.pool.root.1
[2026-04-03 05:16:05] -rw-r--r--. 2 boinc boinc     15845 Apr  3 02:28 start_atlas.sh
[2026-04-03 05:16:05] drwxrwx--x. 2 boinc boinc      4096 Apr  3 02:28 shared
[2026-04-03 05:16:05] -rw-r--r--. 2 boinc boinc    597542 Apr  3 02:28 input.tar.gz
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc         0 Apr  3 02:28 boinc_lockfile
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc      2575 Apr  3 02:28 pandaJob.out
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc   1005191 Apr  3 02:28 agis_schedconf.cvmfs.json
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc   1511579 Apr  3 02:28 agis_ddmendpoints.agis.ALL.json
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc       443 Apr  3 02:28 workernode_map.json
[2026-04-03 05:16:05] drwx------. 5 boinc boinc      4096 Apr  3 02:28 pilot3
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc 197892127 Apr  3 05:14 HITS.49263191._004700.pool.root.1
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc       529 Apr  3 05:14 boinc_task_state.xml
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc      1026 Apr  3 05:15 memory_monitor_summary.json
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc    357560 Apr  3 05:15 log.49263191._004700.job.log.tgz.1
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc      6351 Apr  3 05:15 heartbeat.json
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc        95 Apr  3 05:15 pilot_heartbeat.json
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc      8192 Apr  3 05:15 boinc_mmap_file
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc        27 Apr  3 05:15 wrapper_checkpoint.txt
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc      4831 Apr  3 05:16 pilotlog.txt
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc   1387675 Apr  3 05:16 log.49263191._004700.job.log.1
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc       357 Apr  3 05:16 output.list
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc       620 Apr  3 05:16 runtime_log
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc   1761280 Apr  3 05:16 result.tar.gz
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc      9205 Apr  3 05:16 runtime_log.err
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc       666 Apr  3 05:16 M6lNDm7nHR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmSMMKDm66Uogm.diag
[2026-04-03 05:16:05] -rw-r--r--. 1 boinc boinc     21143 Apr  3 05:16 stderr.txt
[2026-04-03 05:16:05] HITS file was successfully produced:
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc 197892127 Apr  3 05:14 shared/HITS.pool.root.1
[2026-04-03 05:16:05]  *** Contents of shared directory: ***
[2026-04-03 05:16:05] total 413836
[2026-04-03 05:16:05] -rw-r--r--. 2 boinc boinc 223488894 Apr  3 02:28 ATLAS.root_0
[2026-04-03 05:16:05] -rw-r--r--. 2 boinc boinc     15845 Apr  3 02:28 start_atlas.sh
[2026-04-03 05:16:05] -rw-r--r--. 2 boinc boinc    597542 Apr  3 02:28 input.tar.gz
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc 197892127 Apr  3 05:14 HITS.pool.root.1
[2026-04-03 05:16:05] -rw-------. 1 boinc boinc   1761280 Apr  3 05:16 result.tar.gz
05:16:06 (3788682): run_atlas exited; CPU time 38773.775409
05:16:06 (3788682): called boinc_finish(0)

</stderr_txt>
]]>

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