Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:57:04 (1461830): wrapper (7.7.26015): starting
10:57:04 (1461830): wrapper: running run_atlas (--nthreads 12)
[2026-03-31 10:57:04] Arguments: --nthreads 12
[2026-03-31 10:57:04] Threads: 12
[2026-03-31 10:57:04] Checking for CVMFS
[2026-03-31 10:57:04] No cvmfs_config command found, will try listing directly
[2026-03-31 10:57:04] CVMFS is ok
[2026-03-31 10:57:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 10:57:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 10:57:04] Further information can be found at the LHC@home message board.
[2026-03-31 10:57:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 10:57:04] Checking for apptainer binary...
[2026-03-31 10:57:04] which: no apptainer in ((null))
[2026-03-31 10:57:04] apptainer is not installed, using version from CVMFS
[2026-03-31 10:57:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 10:57:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-31 10:57:04] apptainer works
[2026-03-31 10:57:04] Set ATHENA_PROC_NUMBER=12
[2026-03-31 10:57:04] Set ATHENA_CORE_NUMBER=12
[2026-03-31 10:57:04] Starting ATLAS job with PandaID=7072017519
[2026-03-31 10:57:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 11:26:24]  *** The last 200 lines of the pilot log: ***
[2026-03-31 11:26:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 11:26:24]  replicas=None
[2026-03-31 11:26:24]  scope=mc23_13p6TeV
[2026-03-31 11:26:24]  status=None
[2026-03-31 11:26:24]  status_code=0
[2026-03-31 11:26:24]  storage_token=
[2026-03-31 11:26:24]  surl=/var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7072017519/log.49263208._005755.job.log.tgz.1
[2026-03-31 11:26:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/8e/log.49263208._005755.job.log.tgz.1
[2026-03-31 11:26:24]  workdir=None
[2026-03-31 11:26:24] ]
[2026-03-31 11:26:24] 2026-03-31 09:25:25,123 | INFO     | transferring file log.49263208._005755.job.log.tgz.1 from /var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7072017519/log.49263208._005755.job.log.tgz.1 to /var/lib/
[2026-03-31 11:26:24] 2026-03-31 09:25:25,123 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7072017519/log.49263208._005755.job.log.tgz.1 /var/lib/boinc/var/slot204/slots/2/
[2026-03-31 11:26:24] 2026-03-31 09:25:25,141 | INFO     | adding to output.list: log.49263208._005755.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/8e/log.49263208._005755.job.log.tg
[2026-03-31 11:26:24] 2026-03-31 09:25:25,141 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 11:26:24] 2026-03-31 09:25:25,142 | INFO     | summary of transferred files:
[2026-03-31 11:26:24] 2026-03-31 09:25:25,142 | INFO     |  -- lfn=log.49263208._005755.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 11:26:24] 2026-03-31 09:25:25,142 | INFO     | stage-out finished correctly
[2026-03-31 11:26:24] 2026-03-31 09:25:25,907 | WARNING  | process 1472297 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 11:26:24] 2026-03-31 09:25:25,908 | INFO     | using path: /var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7072017519/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 11:26:24] 2026-03-31 09:25:26,278 | INFO     | PID=1466447 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-31 11:26:24] 2026-03-31 09:25:26,278 | INFO     | .. there are 12 such processes running
[2026-03-31 11:26:24] 2026-03-31 09:25:26,468 | INFO     | number of running child processes to parent process 1472297: 1
[2026-03-31 11:26:24] 2026-03-31 09:25:26,468 | INFO     | maximum number of monitored processes: 6
[2026-03-31 11:26:24] 2026-03-31 09:25:27,278 | INFO     | time since job start (1691s) is within the limit (345600.0s)
[2026-03-31 11:26:24] 2026-03-31 09:25:27,474 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 11:26:24] 2026-03-31 09:25:28,972 | INFO     | monitor loop #129: job 0:7072017519 is in state 'finished'
[2026-03-31 11:26:24] 2026-03-31 09:25:28,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,284 | INFO     | time since job start (1693s) is within the limit (345600.0s)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,286 | INFO     | job 7072017519 has state=finished
[2026-03-31 11:26:24] 2026-03-31 09:25:29,287 | INFO     | preparing for final server update for job 7072017519 in state='finished'
[2026-03-31 11:26:24] 2026-03-31 09:25:29,287 | INFO     | reading metadata from: /var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7072017519/jobReport.json
[2026-03-31 11:26:24] 2026-03-31 09:25:29,288 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot204/slots/2/workernode_map.json
[2026-03-31 11:26:24] 2026-03-31 09:25:29,289 | INFO     | this job has now completed (state=finished)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,289 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,289 | INFO     | log transfer has been attempted: DONE
[2026-03-31 11:26:24] 2026-03-31 09:25:29,289 | INFO     | job 7072017519 has finished - writing final server update
[2026-03-31 11:26:24] 2026-03-31 09:25:29,289 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_13256/.job.ad'
[2026-03-31 11:26:24] 2026-03-31 09:25:29,289 | INFO     | total number of processed events: 400 (read)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,307 | INFO     | using path: /var/lib/boinc/var/slot204/slots/2/PanDA_Pilot-7072017519/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,307 | INFO     | extracted standard info from prmon json
[2026-03-31 11:26:24] 2026-03-31 09:25:29,308 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 11:26:24] 2026-03-31 09:25:29,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-31 11:26:24] 2026-03-31 09:25:29,308 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 11:26:24] 2026-03-31 09:25:29,308 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 11:26:24] 2026-03-31 09:25:29,308 | INFO     | fitting pss+swap vs Time
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | sum of square deviations: 2865170.0
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | sum of deviations: -20586158.0
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | mean x: 1774948373.0
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | mean y: 2698984.4285714286
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | intersect: 12755648250.413115
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | chi2: 0.00021306295758795305
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | current memory leak: -7.18 B/s (using 21 data points, chi2=0.00)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | could have reported an average CPU frequency of 3591 MHz (4 samples)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | ..............................
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | . Timing measurements:
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | . get job = 0 s
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | . initial setup = 4 s
[2026-03-31 11:26:24] 2026-03-31 09:25:29,309 | INFO     | . payload setup = 6 s
[2026-03-31 11:26:24] 2026-03-31 09:25:29,310 | INFO     | . stage-in = 0 s
[2026-03-31 11:26:24] 2026-03-31 09:25:29,310 | INFO     | . payload execution = 1665 s
[2026-03-31 11:26:24] 2026-03-31 09:25:29,310 | INFO     | . stage-out = 0 s
[2026-03-31 11:26:24] 2026-03-31 09:25:29,310 | INFO     | . log creation = 0 s
[2026-03-31 11:26:24] 2026-03-31 09:25:29,310 | INFO     | ..............................
[2026-03-31 11:26:24] 2026-03-31 09:25:29,359 | INFO     | 
[2026-03-31 11:26:24] 2026-03-31 09:25:29,359 | INFO     | job summary report
[2026-03-31 11:26:24] 2026-03-31 09:25:29,359 | INFO     | --------------------------------------------------
[2026-03-31 11:26:24] 2026-03-31 09:25:29,359 | INFO     | PanDA job id: 7072017519
[2026-03-31 11:26:24] 2026-03-31 09:25:29,359 | INFO     | task id: 49263208
[2026-03-31 11:26:24] 2026-03-31 09:25:29,359 | INFO     | errors: (none)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,359 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 11:26:24] 2026-03-31 09:25:29,359 | INFO     | pilot state: finished 
[2026-03-31 11:26:24] 2026-03-31 09:25:29,359 | INFO     | transexitcode: 0
[2026-03-31 11:26:24] 2026-03-31 09:25:29,359 | INFO     | exeerrorcode: 0
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | exeerrordiag: 
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | exitcode: 0
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | exitmsg: OK
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | cpuconsumptiontime: 17729 s
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | nevents: 400
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | neventsw: 0
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | pid: 1472297
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | pgrp: 1472297
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | corecount: 12
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | event service: False
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | sizes: {0: 2279827, 1: 2280288, 11: 2280288, 1676: 2305126, 1678: 2314148, 1680: 2314204, 1682: 2314526}
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | --------------------------------------------------
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | 
[2026-03-31 11:26:24] 2026-03-31 09:25:29,360 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/2
[2026-03-31 11:26:24] 2026-03-31 09:25:29,376 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | job 7072017519 has completed (purged errors)
[2026-03-31 11:26:24] 2026-03-31 09:25:29,377 | INFO     | overall cleanup function is called
[2026-03-31 11:26:24] 2026-03-31 09:25:30,384 | INFO     | --- collectZombieJob: --- 10, [1472297]
[2026-03-31 11:26:24] 2026-03-31 09:25:30,385 | INFO     | zombie collector waiting for pid 1472297
[2026-03-31 11:26:24] 2026-03-31 09:25:30,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 11:26:24] 2026-03-31 09:25:30,385 | INFO     | collected zombie processes
[2026-03-31 11:26:24] 2026-03-31 09:25:30,385 | INFO     | will attempt to kill all subprocesses of pid=1472297
[2026-03-31 11:26:24] 2026-03-31 09:25:30,721 | INFO     | process IDs to be killed: [1472297] (in reverse order)
[2026-03-31 11:26:24] 2026-03-31 09:25:30,863 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 11:26:24] 2026-03-31 09:25:30,863 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 11:26:24] 2026-03-31 09:25:30,888 | INFO     | did not find any defunct processes belonging to 1472297
[2026-03-31 11:26:24] 2026-03-31 09:25:30,912 | INFO     | did not find any defunct processes belonging to 1472297
[2026-03-31 11:26:24] 2026-03-31 09:25:30,912 | INFO     | ready for new job
[2026-03-31 11:26:24] 2026-03-31 09:25:30,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-31 11:26:24] 2026-03-31 09:25:30,913 | INFO     | **************************************
[2026-03-31 11:26:24] 2026-03-31 09:25:30,914 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-31 11:26:24] 2026-03-31 09:25:30,914 | INFO     | **************************************
[2026-03-31 11:26:24] 2026-03-31 09:25:30,914 | INFO     | 
[2026-03-31 11:26:24] 2026-03-31 09:25:30,919 | INFO     | architecture information:
[2026-03-31 11:26:24] 2026-03-31 09:25:30,920 | INFO     | executing command: cat /etc/os-release
[2026-03-31 11:26:24] 2026-03-31 09:25:30,934 | INFO     | cat /etc/os-release:
[2026-03-31 11:26:24] NAME="CentOS Linux"
[2026-03-31 11:26:24] VERSION="7 (Core)"
[2026-03-31 11:26:24] ID="centos"
[2026-03-31 11:26:24] ID_LIKE="rhel fedora"
[2026-03-31 11:26:24] VERSION_ID="7"
[2026-03-31 11:26:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 11:26:24] ANSI_COLOR="0;31"
[2026-03-31 11:26:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 11:26:24] HOME_URL="https://www.centos.org/"
[2026-03-31 11:26:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 11:26:24] 
[2026-03-31 11:26:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 11:26:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 11:26:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 11:26:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 11:26:24] 
[2026-03-31 11:26:24] 2026-03-31 09:25:30,934 | INFO     | **************************************
[2026-03-31 11:26:24] 2026-03-31 09:25:31,437 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/2
[2026-03-31 11:26:24] 2026-03-31 09:25:31,451 | INFO     | sufficient remaining disk space (177101340672 B)
[2026-03-31 11:26:24] 2026-03-31 09:25:31,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 11:26:24] 2026-03-31 09:25:31,451 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 11:26:24] 2026-03-31 09:25:31,451 | INFO     | update_server=False
[2026-03-31 11:26:24] 2026-03-31 09:25:31,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-31 11:26:24] 2026-03-31 09:25:31,451 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 11:26:24] 2026-03-31 09:25:31,475 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-31 11:26:24] 2026-03-31 09:25:31,476 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-31 11:26:24] 2026-03-31 09:25:31,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 11:26:24] 2026-03-31 09:25:31,476 | INFO     | will abort loop
[2026-03-31 11:26:24] 2026-03-31 09:25:31,813 | INFO     | all job control threads have been joined
[2026-03-31 11:26:24] 2026-03-31 09:25:31,876 | INFO     | all data control threads have been joined
[2026-03-31 11:26:24] 2026-03-31 09:25:32,457 | INFO     | [job] retrieve thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:32,481 | INFO     | [job] job monitor thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:32,518 | INFO     | all payload control threads have been joined
[2026-03-31 11:26:24] 2026-03-31 09:25:32,810 | INFO     | [job] validate thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:32,819 | INFO     | [job] control thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:32,844 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:32,880 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:32,882 | INFO     | [data] control thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:32,910 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:33,103 | INFO     | [data] copytool_in thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:33,343 | INFO     | [payload] failed_post thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:33,426 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:33,455 | INFO     | [data] copytool_out thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:33,523 | INFO     | [payload] control thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:33,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 11:26:24] 2026-03-31 09:25:33,992 | INFO     | [payload] validate_post thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:34,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 11:26:24] 2026-03-31 09:25:35,376 | INFO     | [job] queue monitor thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:25:37,530 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 11:26:24] 2026-03-31 09:26:02,788 | INFO     | PID=1466447 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-31 11:26:24] 2026-03-31 09:26:02,788 | INFO     | .. there are 12 such processes running
[2026-03-31 11:26:24] 2026-03-31 09:26:02,789 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 11:26:24] 2026-03-31 09:26:02,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 11:26:24] 2026-03-31 09:26:02,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 11:26:24] 2026-03-31 09:26:18,704 | INFO     | [monitor] cgroup control has ended
[2026-03-31 11:26:24] 2026-03-31 09:26:18,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22461609043776)>', '<ExcThread(monitor, started 22461371660032)>']
[2026-03-31 11:26:24] 2026-03-31 09:26:18,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 11:26:24] 2026-03-31 09:26:18,865 | INFO     | [monitor] control thread has ended
[2026-03-31 11:26:24] 2026-03-31 09:26:23,807 | INFO     | all workflow threads have been joined
[2026-03-31 11:26:24] 2026-03-31 09:26:23,808 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 11:26:24] 2026-03-31 09:26:23,808 | INFO     | traces error code: 0
[2026-03-31 11:26:24] 2026-03-31 09:26:23,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 11:26:24] 2026-03-31 09:26:23,910 [wrapper] ==== pilot stdout END ====
[2026-03-31 11:26:24] 2026-03-31 09:26:23,911 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 11:26:24] 2026-03-31 09:26:23,913 [wrapper] pilotpid: 1466447
[2026-03-31 11:26:24] 2026-03-31 09:26:23,914 [wrapper] Pilot exit status: 0
[2026-03-31 11:26:24] 2026-03-31 09:26:23,921 [wrapper] pandaids: 7072017519
[2026-03-31 11:26:24] 2026-03-31 09:26:24,024 [wrapper] cleanup supervisor_pilot 1621081 1466448
[2026-03-31 11:26:24] 2026-03-31 09:26:24,026 [wrapper] Test setup, not cleaning
[2026-03-31 11:26:24] 2026-03-31 09:26:24,028 [wrapper] apfmon messages muted
[2026-03-31 11:26:24] 2026-03-31 09:26:24,029 [wrapper] ==== wrapper stdout END ====
[2026-03-31 11:26:24] 2026-03-31 09:26:24,031 [wrapper] ==== wrapper stderr END ====
[2026-03-31 11:26:24]  *** Error codes and diagnostics ***
[2026-03-31 11:26:24]     "exeErrorCode": 0,
[2026-03-31 11:26:24]     "exeErrorDiag": "",
[2026-03-31 11:26:24]     "pilotErrorCode": 0,
[2026-03-31 11:26:24]     "pilotErrorDiag": "",
[2026-03-31 11:26:24]  *** Listing of results directory ***
[2026-03-31 11:26:24] total 410264
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc      5118 Mar 30 01:45 queuedata.json
[2026-03-31 11:26:24] -rwx------. 1 boinc boinc     36322 Mar 30 01:46 runpilot2-wrapper.sh
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc    585013 Mar 30 01:47 pilot3.tar.gz
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc       100 Mar 31 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 11:26:24] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 10:56 run_atlas
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc       105 Mar 31 10:56 job.xml
[2026-03-31 11:26:24] -rw-r--r--. 2 boinc boinc 223183884 Mar 31 10:57 EVNT.49263206._000280.pool.root.1
[2026-03-31 11:26:24] -rw-r--r--. 2 boinc boinc     15845 Mar 31 10:57 start_atlas.sh
[2026-03-31 11:26:24] drwxrwx--x. 2 boinc boinc      4096 Mar 31 10:57 shared
[2026-03-31 11:26:24] -rw-r--r--. 2 boinc boinc    597542 Mar 31 10:57 input.tar.gz
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc      6711 Mar 31 10:57 init_data.xml
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc         0 Mar 31 10:57 boinc_lockfile
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc      2573 Mar 31 10:57 pandaJob.out
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc   1003225 Mar 31 10:57 agis_schedconf.cvmfs.json
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc   1511579 Mar 31 10:57 agis_ddmendpoints.agis.ALL.json
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc       445 Mar 31 10:57 workernode_map.json
[2026-03-31 11:26:24] drwx------. 5 boinc boinc      4096 Mar 31 10:57 pilot3
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc       530 Mar 31 11:24 boinc_task_state.xml
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc 191759640 Mar 31 11:24 HITS.49263208._005755.pool.root.1
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc      1031 Mar 31 11:25 memory_monitor_summary.json
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc    334159 Mar 31 11:25 log.49263208._005755.job.log.tgz.1
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc      6360 Mar 31 11:25 heartbeat.json
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc        95 Mar 31 11:26 pilot_heartbeat.json
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc      8192 Mar 31 11:26 boinc_mmap_file
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc        27 Mar 31 11:26 wrapper_checkpoint.txt
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc      5017 Mar 31 11:26 pilotlog.txt
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc    285922 Mar 31 11:26 log.49263208._005755.job.log.1
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc       357 Mar 31 11:26 output.list
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc       620 Mar 31 11:26 runtime_log
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc    634880 Mar 31 11:26 result.tar.gz
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc      9223 Mar 31 11:26 runtime_log.err
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc       660 Mar 31 11:26 iqNKDmt0ER9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmz8LKDmQtAHln.diag
[2026-03-31 11:26:24] -rw-r--r--. 1 boinc boinc     21888 Mar 31 11:26 stderr.txt
[2026-03-31 11:26:24] HITS file was successfully produced:
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc 191759640 Mar 31 11:24 shared/HITS.pool.root.1
[2026-03-31 11:26:24]  *** Contents of shared directory: ***
[2026-03-31 11:26:24] total 406448
[2026-03-31 11:26:24] -rw-r--r--. 2 boinc boinc 223183884 Mar 31 10:57 ATLAS.root_0
[2026-03-31 11:26:24] -rw-r--r--. 2 boinc boinc     15845 Mar 31 10:57 start_atlas.sh
[2026-03-31 11:26:24] -rw-r--r--. 2 boinc boinc    597542 Mar 31 10:57 input.tar.gz
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc 191759640 Mar 31 11:24 HITS.pool.root.1
[2026-03-31 11:26:24] -rw-------. 1 boinc boinc    634880 Mar 31 11:26 result.tar.gz
11:26:25 (1461830): run_atlas exited; CPU time 17777.942513
11:26:25 (1461830): called boinc_finish(0)

</stderr_txt>
]]>

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