Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:27:07 (3530069): wrapper (7.7.26015): starting
20:27:07 (3530069): wrapper: running run_atlas (--nthreads 2)
[2026-03-30 20:27:07] Arguments: --nthreads 2
[2026-03-30 20:27:07] Threads: 2
[2026-03-30 20:27:07] Checking for CVMFS
[2026-03-30 20:27:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 20:27:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 20:27:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 20:27:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 20:27:08] 2.9.2.0 3201293 4244 57704 157893 4 1 19419092 36864000 0 130560 0 1300688 99.978 159829 15359 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-30 20:27:08] CVMFS is ok
[2026-03-30 20:27:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 20:27:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 20:27:08] Further information can be found at the LHC@home message board.
[2026-03-30 20:27:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 20:27:08] Checking for apptainer binary...
[2026-03-30 20:27:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 20:27:08] Running /usr/bin/apptainer --version
[2026-03-30 20:27:08] apptainer version 1.4.1-1.1
[2026-03-30 20:27:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 20:27:08] magicA244
[2026-03-30 20:27:08] apptainer works
[2026-03-30 20:27:08] Set ATHENA_PROC_NUMBER=2
[2026-03-30 20:27:08] Set ATHENA_CORE_NUMBER=2
[2026-03-30 20:27:08] Starting ATLAS job with PandaID=7072090206
[2026-03-30 20:27:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 22:37:36]  *** The last 200 lines of the pilot log: ***
[2026-03-30 22:37:36] 2026-03-30 20:36:43,506 | INFO     | collected zombie processes
[2026-03-30 22:37:36] 2026-03-30 20:36:43,506 | INFO     | will attempt to kill all subprocesses of pid=3538499
[2026-03-30 22:37:36] 2026-03-30 20:36:43,534 | INFO     | process IDs to be killed: [3538499] (in reverse order)
[2026-03-30 22:37:36] 2026-03-30 20:36:43,557 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 22:37:36] 2026-03-30 20:36:43,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 22:37:36] 2026-03-30 20:36:43,558 | INFO     | did not find any defunct processes belonging to 3538499
[2026-03-30 22:37:36] 2026-03-30 20:36:43,558 | INFO     | did not find any defunct processes belonging to 3538499
[2026-03-30 22:37:36] 2026-03-30 20:36:43,558 | INFO     | ready for new job
[2026-03-30 22:37:36] 2026-03-30 20:36:43,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-30 22:37:36] 2026-03-30 20:36:43,559 | INFO     | **************************************
[2026-03-30 22:37:36] 2026-03-30 20:36:43,559 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-30 22:37:36] 2026-03-30 20:36:43,559 | INFO     | **************************************
[2026-03-30 22:37:36] 2026-03-30 20:36:43,559 | INFO     | 
[2026-03-30 22:37:36] 2026-03-30 20:36:43,559 | INFO     | architecture information:
[2026-03-30 22:37:36] 2026-03-30 20:36:43,559 | INFO     | executing command: cat /etc/os-release
[2026-03-30 22:37:36] 2026-03-30 20:36:43,569 | INFO     | cat /etc/os-release:
[2026-03-30 22:37:36] NAME="CentOS Linux"
[2026-03-30 22:37:36] VERSION="7 (Core)"
[2026-03-30 22:37:36] ID="centos"
[2026-03-30 22:37:36] ID_LIKE="rhel fedora"
[2026-03-30 22:37:36] VERSION_ID="7"
[2026-03-30 22:37:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 22:37:36] ANSI_COLOR="0;31"
[2026-03-30 22:37:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 22:37:36] HOME_URL="https://www.centos.org/"
[2026-03-30 22:37:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 22:37:36] 
[2026-03-30 22:37:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 22:37:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 22:37:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 22:37:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 22:37:36] 
[2026-03-30 22:37:36] 2026-03-30 20:36:43,569 | INFO     | **************************************
[2026-03-30 22:37:36] 2026-03-30 20:36:44,072 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-30 22:37:36] 2026-03-30 20:36:44,082 | INFO     | sufficient remaining disk space (504902975488 B)
[2026-03-30 22:37:36] 2026-03-30 20:36:44,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 22:37:36] 2026-03-30 20:36:44,083 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 22:37:36] 2026-03-30 20:36:44,083 | INFO     | update_server=False
[2026-03-30 22:37:36] 2026-03-30 20:36:44,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-30 22:37:36] 2026-03-30 20:36:44,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 22:37:36] 2026-03-30 20:36:44,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 22:37:36] 2026-03-30 20:36:44,197 | INFO     | all job control threads have been joined
[2026-03-30 22:37:36] 2026-03-30 20:36:44,269 | INFO     | all payload control threads have been joined
[2026-03-30 22:37:36] 2026-03-30 20:36:44,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 22:37:36] 2026-03-30 20:36:44,340 | INFO     | aborting loop
[2026-03-30 22:37:36] 2026-03-30 20:36:44,475 | INFO     | all data control threads have been joined
[2026-03-30 22:37:36] 2026-03-30 20:36:44,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 22:37:36] 2026-03-30 20:36:45,087 | INFO     | [job] retrieve thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:45,088 | INFO     | [job] queue monitor thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:45,202 | INFO     | [job] control thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:45,230 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:45,275 | INFO     | [payload] control thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:45,345 | INFO     | [job] job monitor thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:45,457 | INFO     | [payload] validate_post thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:45,480 | INFO     | [data] control thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:45,880 | INFO     | [job] validate thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:45,954 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:46,053 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:46,199 | INFO     | [data] copytool_in thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:46,245 | INFO     | [payload] failed_post thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:46,574 | INFO     | [data] copytool_out thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:48,088 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:36:48,133 | INFO     | job.realtimelogging is not enabled
[2026-03-30 22:37:36] 2026-03-30 20:36:49,138 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 22:37:36] 2026-03-30 20:37:13,815 | INFO     | PID=3534090 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-30 22:37:36] 2026-03-30 20:37:13,816 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 22:37:36] 2026-03-30 20:37:13,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 22:37:36] 2026-03-30 20:37:13,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 22:37:36] 2026-03-30 20:37:29,204 | INFO     | [monitor] cgroup control has ended
[2026-03-30 22:37:36] 2026-03-30 20:37:31,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773379417920)>', '<ExcThread(monitor, started 139772521604864)>']
[2026-03-30 22:37:36] 2026-03-30 20:37:31,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 22:37:36] 2026-03-30 20:37:31,904 | INFO     | [monitor] control thread has ended
[2026-03-30 22:37:36] 2026-03-30 20:37:36,336 | INFO     | all workflow threads have been joined
[2026-03-30 22:37:36] 2026-03-30 20:37:36,336 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 22:37:36] 2026-03-30 20:37:36,337 | INFO     | traces error code: 0
[2026-03-30 22:37:36] 2026-03-30 20:37:36,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 22:37:36] 2026-03-30 20:37:36,384 [wrapper] ==== pilot stdout END ====
[2026-03-30 22:37:36] 2026-03-30 20:37:36,387 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 22:37:36] 2026-03-30 20:37:36,390 [wrapper] pilotpid: 3534090
[2026-03-30 22:37:36] 2026-03-30 20:37:36,393 [wrapper] Pilot exit status: 0
[2026-03-30 22:37:36] 2026-03-30 20:37:36,401 [wrapper] pandaids: 7072090206
[2026-03-30 22:37:36] 2026-03-30 20:37:36,416 [wrapper] cleanup supervisor_pilot 3543573 3534091
[2026-03-30 22:37:36] 2026-03-30 20:37:36,418 [wrapper] Test setup, not cleaning
[2026-03-30 22:37:36] 2026-03-30 20:37:36,421 [wrapper] apfmon messages muted
[2026-03-30 22:37:36] 2026-03-30 20:37:36,424 [wrapper] ==== wrapper stdout END ====
[2026-03-30 22:37:36] 2026-03-30 20:37:36,427 [wrapper] ==== wrapper stderr END ====
[2026-03-30 22:37:36]  *** Error codes and diagnostics ***
[2026-03-30 22:37:36]     "exeErrorCode": 0,
[2026-03-30 22:37:36]     "exeErrorDiag": "",
[2026-03-30 22:37:36]     "pilotErrorCode": 0,
[2026-03-30 22:37:36]     "pilotErrorDiag": "",
[2026-03-30 22:37:36]  *** Listing of results directory ***
[2026-03-30 22:37:36] total 418340
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc    585013 Mar 30 05:28 pilot3.tar.gz
[2026-03-30 22:37:36] -rwx------ 1 boinc boinc     36322 Mar 30 05:28 runpilot2-wrapper.sh
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc      5118 Mar 30 05:28 queuedata.json
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc       100 Mar 30 20:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 22:37:36] -rwxr-xr-x 1 boinc boinc      7986 Mar 30 20:27 run_atlas
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc       105 Mar 30 20:27 job.xml
[2026-03-30 22:37:36] -rw-r--r-- 2 boinc boinc 225309219 Mar 30 20:27 EVNT.49263206._000331.pool.root.1
[2026-03-30 22:37:36] -rw-r--r-- 2 boinc boinc    597538 Mar 30 20:27 input.tar.gz
[2026-03-30 22:37:36] -rw-r--r-- 2 boinc boinc     15845 Mar 30 20:27 start_atlas.sh
[2026-03-30 22:37:36] drwxrwx--x 2 boinc boinc      4096 Mar 30 20:27 shared
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc         0 Mar 30 20:27 boinc_setup_complete
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc      6208 Mar 30 20:27 init_data.xml
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc         0 Mar 30 20:27 boinc_lockfile
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc      2573 Mar 30 20:27 pandaJob.out
[2026-03-30 22:37:36] -rw------- 1 boinc boinc   1004374 Mar 30 20:27 agis_schedconf.cvmfs.json
[2026-03-30 22:37:36] -rw------- 1 boinc boinc   1511579 Mar 30 20:27 agis_ddmendpoints.agis.ALL.json
[2026-03-30 22:37:36] -rw------- 1 boinc boinc       422 Mar 30 20:27 workernode_map.json
[2026-03-30 22:37:36] drwx------ 5 boinc boinc      4096 Mar 30 20:27 pilot3
[2026-03-30 22:37:36] -rw------- 1 boinc boinc 196356835 Mar 30 22:36 HITS.49263208._007039.pool.root.1
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc       529 Mar 30 22:36 boinc_task_state.xml
[2026-03-30 22:37:36] -rw------- 1 boinc boinc      1016 Mar 30 22:36 memory_monitor_summary.json
[2026-03-30 22:37:36] -rw------- 1 boinc boinc    279845 Mar 30 22:36 log.49263208._007039.job.log.tgz.1
[2026-03-30 22:37:36] -rw------- 1 boinc boinc      6305 Mar 30 22:36 heartbeat.json
[2026-03-30 22:37:36] -rw------- 1 boinc boinc        95 Mar 30 22:37 pilot_heartbeat.json
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc        27 Mar 30 22:37 wrapper_checkpoint.txt
[2026-03-30 22:37:36] -rw------- 1 boinc boinc      4820 Mar 30 22:37 pilotlog.txt
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc      8192 Mar 30 22:37 boinc_mmap_file
[2026-03-30 22:37:36] -rw------- 1 boinc boinc   1114180 Mar 30 22:37 log.49263208._007039.job.log.1
[2026-03-30 22:37:36] -rw------- 1 boinc boinc       357 Mar 30 22:37 output.list
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc       620 Mar 30 22:37 runtime_log
[2026-03-30 22:37:36] -rw------- 1 boinc boinc   1413120 Mar 30 22:37 result.tar.gz
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc      8911 Mar 30 22:37 runtime_log.err
[2026-03-30 22:37:36] -rw------- 1 boinc boinc       662 Mar 30 22:37 awfNDm3TIR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmmaMKDmOSqSSm.diag
[2026-03-30 22:37:36] -rw-r--r-- 1 boinc boinc     10375 Mar 30 22:37 stderr.txt
[2026-03-30 22:37:36] HITS file was successfully produced:
[2026-03-30 22:37:36] -rw------- 1 boinc boinc 196356835 Mar 30 22:36 shared/HITS.pool.root.1
[2026-03-30 22:37:36]  *** Contents of shared directory: ***
[2026-03-30 22:37:36] total 413772
[2026-03-30 22:37:36] -rw-r--r-- 2 boinc boinc 225309219 Mar 30 20:27 ATLAS.root_0
[2026-03-30 22:37:36] -rw-r--r-- 2 boinc boinc    597538 Mar 30 20:27 input.tar.gz
[2026-03-30 22:37:36] -rw-r--r-- 2 boinc boinc     15845 Mar 30 20:27 start_atlas.sh
[2026-03-30 22:37:36] -rw------- 1 boinc boinc 196356835 Mar 30 22:36 HITS.pool.root.1
[2026-03-30 22:37:36] -rw------- 1 boinc boinc   1413120 Mar 30 22:37 result.tar.gz
22:37:38 (3530069): run_atlas exited; CPU time 14857.064327
22:37:38 (3530069): called boinc_finish(0)

</stderr_txt>
]]>

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