Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:44:33 (48140): wrapper (7.7.26015): starting
01:44:33 (48140): wrapper: running run_atlas (--nthreads 4)
[2026-04-01 01:44:33] Arguments: --nthreads 4
[2026-04-01 01:44:33] Threads: 4
[2026-04-01 01:44:33] Checking for CVMFS
[2026-04-01 01:44:33] No cvmfs_config command found, will try listing directly
[2026-04-01 01:44:33] CVMFS is ok
[2026-04-01 01:44:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 01:44:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 01:44:33] Further information can be found at the LHC@home message board.
[2026-04-01 01:44:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 01:44:33] Checking for apptainer binary...
[2026-04-01 01:44:33] which: no apptainer in ((null))
[2026-04-01 01:44:33] apptainer is not installed, using version from CVMFS
[2026-04-01 01:44:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 01:44:33] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-04-01 01:44:33] apptainer works
[2026-04-01 01:44:33] Set ATHENA_PROC_NUMBER=4
[2026-04-01 01:44:33] Set ATHENA_CORE_NUMBER=4
[2026-04-01 01:44:33] Starting ATLAS job with PandaID=7072088805
[2026-04-01 01:44:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 04:48:31]  *** The last 200 lines of the pilot log: ***
[2026-04-01 04:48:31] 2026-04-01 02:46:33,684 | INFO     | job 7072088805 has finished - writing final server update
[2026-04-01 04:48:31] 2026-04-01 02:46:33,684 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3521838/.job.ad'
[2026-04-01 04:48:31] 2026-04-01 02:46:33,684 | INFO     | total number of processed events: 400 (read)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,696 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7072088805/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,696 | INFO     | extracted standard info from prmon json
[2026-04-01 04:48:31] 2026-04-01 02:46:33,697 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 04:48:31] 2026-04-01 02:46:33,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-01 04:48:31] 2026-04-01 02:46:33,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 04:48:31] 2026-04-01 02:46:33,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 04:48:31] 2026-04-01 02:46:33,700 | INFO     | fitting pss+swap vs Time
[2026-04-01 04:48:31] 2026-04-01 02:46:33,700 | INFO     | sum of square deviations: 1778377530.0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,701 | INFO     | sum of deviations: -7106854348.999994
[2026-04-01 04:48:31] 2026-04-01 02:46:33,702 | INFO     | mean x: 1775006146.0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,702 | INFO     | mean y: 2338039.3016759777
[2026-04-01 04:48:31] 2026-04-01 02:46:33,702 | INFO     | intersect: 7095719470.0723505
[2026-04-01 04:48:31] 2026-04-01 02:46:33,702 | INFO     | chi2: 2.1786296271794
[2026-04-01 04:48:31] 2026-04-01 02:46:33,702 | INFO     | sum of square deviations: 1633472487.5
[2026-04-01 04:48:31] 2026-04-01 02:46:33,703 | INFO     | sum of deviations: 4087675818.9999924
[2026-04-01 04:48:31] 2026-04-01 02:46:33,704 | INFO     | mean x: 1775005993.5
[2026-04-01 04:48:31] 2026-04-01 02:46:33,704 | INFO     | mean y: 2349558.367816092
[2026-04-01 04:48:31] 2026-04-01 02:46:33,704 | INFO     | intersect: -4439506140.906707
[2026-04-01 04:48:31] 2026-04-01 02:46:33,704 | INFO     | chi2: 1.4193596015709127
[2026-04-01 04:48:31] 2026-04-01 02:46:33,704 | INFO     | current chi2=1.4193596015709127 (change=34.85080787189556 %)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,704 | INFO     | sum of square deviations: 1496660620.0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,705 | INFO     | sum of deviations: 4069089484.999999
[2026-04-01 04:48:31] 2026-04-01 02:46:33,705 | INFO     | mean x: 1775005841.0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,705 | INFO     | mean y: 2349537.6390532544
[2026-04-01 04:48:31] 2026-04-01 02:46:33,706 | INFO     | intersect: -4823499092.911993
[2026-04-01 04:48:31] 2026-04-01 02:46:33,706 | INFO     | chi2: 1.4200736803025709
[2026-04-01 04:48:31] 2026-04-01 02:46:33,706 | INFO     | current chi2=1.4200736803025709 (change=-0.05030992363512816 %)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,706 | INFO     | right removable region: 168
[2026-04-01 04:48:31] 2026-04-01 02:46:33,706 | INFO     | sum of square deviations: 1633472487.5
[2026-04-01 04:48:31] 2026-04-01 02:46:33,707 | INFO     | sum of deviations: -29556708505.0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,707 | INFO     | mean x: 1775006298.5
[2026-04-01 04:48:31] 2026-04-01 02:46:33,708 | INFO     | mean y: 2361311.7126436783
[2026-04-01 04:48:31] 2026-04-01 02:46:33,708 | INFO     | intersect: 32120039546.74537
[2026-04-01 04:48:31] 2026-04-01 02:46:33,708 | INFO     | chi2: 0.8601528678236714
[2026-04-01 04:48:31] 2026-04-01 02:46:33,708 | INFO     | current chi2=0.8601528678236714 (change=60.51862799014246 %)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,708 | INFO     | sum of square deviations: 1496660620.0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,709 | INFO     | sum of deviations: -26137877922.0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,709 | INFO     | mean x: 1775006451.0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,709 | INFO     | mean y: 2357495.550295858
[2026-04-01 04:48:31] 2026-04-01 02:46:33,709 | INFO     | intersect: 31001303620.69153
[2026-04-01 04:48:31] 2026-04-01 02:46:33,710 | INFO     | chi2: 0.8574962726228321
[2026-04-01 04:48:31] 2026-04-01 02:46:33,710 | INFO     | current chi2=0.8574962726228321 (change=0.3088515193306159 %)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,710 | INFO     | left removable region: 20
[2026-04-01 04:48:31] 2026-04-01 02:46:33,710 | INFO     | sum of square deviations: 1005179777.0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,711 | INFO     | sum of deviations: -7329064477.999999
[2026-04-01 04:48:31] 2026-04-01 02:46:33,711 | INFO     | mean x: 1775006420.5
[2026-04-01 04:48:31] 2026-04-01 02:46:33,711 | INFO     | mean y: 2361067.6621621624
[2026-04-01 04:48:31] 2026-04-01 02:46:33,711 | INFO     | intersect: 12944460384.000158
[2026-04-01 04:48:31] 2026-04-01 02:46:33,712 | INFO     | chi2: 0.05285172483925713
[2026-04-01 04:48:31] 2026-04-01 02:46:33,712 | INFO     | current memory leak: -7.29 B/s (using 148 data points, chi2=0.05)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,712 | INFO     | could have reported an average CPU frequency of 2594 MHz (10 samples)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,712 | INFO     | ..............................
[2026-04-01 04:48:31] 2026-04-01 02:46:33,712 | INFO     | . Timing measurements:
[2026-04-01 04:48:31] 2026-04-01 02:46:33,712 | INFO     | . get job = 0 s
[2026-04-01 04:48:31] 2026-04-01 02:46:33,713 | INFO     | . initial setup = 6 s
[2026-04-01 04:48:31] 2026-04-01 02:46:33,713 | INFO     | . payload setup = 10 s
[2026-04-01 04:48:31] 2026-04-01 02:46:33,713 | INFO     | . stage-in = 0 s
[2026-04-01 04:48:31] 2026-04-01 02:46:33,713 | INFO     | . payload execution = 10873 s
[2026-04-01 04:48:31] 2026-04-01 02:46:33,713 | INFO     | . stage-out = 1 s
[2026-04-01 04:48:31] 2026-04-01 02:46:33,713 | INFO     | . log creation = 0 s
[2026-04-01 04:48:31] 2026-04-01 02:46:33,713 | INFO     | ..............................
[2026-04-01 04:48:31] 2026-04-01 02:46:33,801 | INFO     | 
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | job summary report
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | --------------------------------------------------
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | PanDA job id: 7072088805
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | task id: 49263200
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | errors: (none)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | pilot state: finished 
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | transexitcode: 0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | exeerrorcode: 0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | exeerrordiag: 
[2026-04-01 04:48:31] 2026-04-01 02:46:33,802 | INFO     | exitcode: 0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | exitmsg: OK
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | cpuconsumptiontime: 41929 s
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | nevents: 400
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | neventsw: 0
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | pid: 58067
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | pgrp: 58067
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | corecount: 4
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | event service: False
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | sizes: {0: 2280259, 11: 2280259, 10887: 2309309, 10888: 2318329, 10889: 2318385, 10892: 2318579}
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | --------------------------------------------------
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | 
[2026-04-01 04:48:31] 2026-04-01 02:46:33,803 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/3
[2026-04-01 04:48:31] 2026-04-01 02:46:33,825 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,826 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,826 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,826 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,826 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,826 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,827 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,827 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 04:48:31] 2026-04-01 02:46:33,827 | INFO     | job 7072088805 has completed (purged errors)
[2026-04-01 04:48:31] 2026-04-01 02:46:33,828 | INFO     | overall cleanup function is called
[2026-04-01 04:48:31] 2026-04-01 02:46:34,835 | INFO     | --- collectZombieJob: --- 10, [58067]
[2026-04-01 04:48:31] 2026-04-01 02:46:34,836 | INFO     | zombie collector waiting for pid 58067
[2026-04-01 04:48:31] 2026-04-01 02:46:34,836 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 04:48:31] 2026-04-01 02:46:34,836 | INFO     | collected zombie processes
[2026-04-01 04:48:31] 2026-04-01 02:46:34,836 | INFO     | will attempt to kill all subprocesses of pid=58067
[2026-04-01 04:48:31] 2026-04-01 02:46:35,208 | INFO     | process IDs to be killed: [58067] (in reverse order)
[2026-04-01 04:48:31] 2026-04-01 02:46:35,331 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 04:48:31] 2026-04-01 02:46:35,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 04:48:31] 2026-04-01 02:46:35,343 | INFO     | did not find any defunct processes belonging to 58067
[2026-04-01 04:48:31] 2026-04-01 02:46:35,355 | INFO     | did not find any defunct processes belonging to 58067
[2026-04-01 04:48:31] 2026-04-01 02:46:35,355 | INFO     | ready for new job
[2026-04-01 04:48:31] 2026-04-01 02:46:35,355 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-01 04:48:31] 2026-04-01 02:46:35,357 | INFO     | **************************************
[2026-04-01 04:48:31] 2026-04-01 02:46:35,357 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-01 04:48:31] 2026-04-01 02:46:35,357 | INFO     | **************************************
[2026-04-01 04:48:31] 2026-04-01 02:46:35,358 | INFO     | 
[2026-04-01 04:48:31] 2026-04-01 02:46:35,361 | INFO     | architecture information:
[2026-04-01 04:48:31] 2026-04-01 02:46:35,362 | INFO     | executing command: cat /etc/os-release
[2026-04-01 04:48:31] 2026-04-01 02:46:35,378 | INFO     | cat /etc/os-release:
[2026-04-01 04:48:31] NAME="CentOS Linux"
[2026-04-01 04:48:31] VERSION="7 (Core)"
[2026-04-01 04:48:31] ID="centos"
[2026-04-01 04:48:31] ID_LIKE="rhel fedora"
[2026-04-01 04:48:31] VERSION_ID="7"
[2026-04-01 04:48:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 04:48:31] ANSI_COLOR="0;31"
[2026-04-01 04:48:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 04:48:31] HOME_URL="https://www.centos.org/"
[2026-04-01 04:48:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 04:48:31] 
[2026-04-01 04:48:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 04:48:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 04:48:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 04:48:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 04:48:31] 
[2026-04-01 04:48:31] 2026-04-01 02:46:35,378 | INFO     | **************************************
[2026-04-01 04:48:31] 2026-04-01 02:46:35,880 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/3
[2026-04-01 04:48:31] 2026-04-01 02:46:35,897 | INFO     | sufficient remaining disk space (34024194048 B)
[2026-04-01 04:48:31] 2026-04-01 02:46:35,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 04:48:31] 2026-04-01 02:46:35,898 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 04:48:31] 2026-04-01 02:46:35,898 | INFO     | update_server=False
[2026-04-01 04:48:31] 2026-04-01 02:46:35,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-01 04:48:31] 2026-04-01 02:46:35,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 04:48:31] 2026-04-01 02:46:35,969 | INFO     | all data control threads have been joined
[2026-04-01 04:48:31] 2026-04-01 02:46:35,991 | INFO     | all payload control threads have been joined
[2026-04-01 04:48:31] 2026-04-01 02:46:36,288 | INFO     | all job control threads have been joined
[2026-04-01 04:48:31] 2026-04-01 02:46:36,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 04:48:31] 2026-04-01 02:46:36,726 | INFO     | aborting loop
[2026-04-01 04:48:31] 2026-04-01 02:46:36,903 | INFO     | [job] retrieve thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:36,975 | INFO     | [data] control thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:36,996 | INFO     | [payload] control thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:37,040 | INFO     | [job] validate thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:37,109 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:37,294 | INFO     | [job] control thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:37,381 | INFO     | [payload] failed_post thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:37,474 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:37,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 04:48:31] 2026-04-01 02:46:37,637 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:37,731 | INFO     | [job] job monitor thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:37,904 | INFO     | [data] copytool_out thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:38,005 | INFO     | [data] copytool_in thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:38,237 | INFO     | [payload] validate_post thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:38,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 04:48:31] 2026-04-01 02:46:39,818 | INFO     | [job] queue monitor thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:41,575 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:46:46,918 | INFO     | job.realtimelogging is not enabled
[2026-04-01 04:48:31] 2026-04-01 02:46:47,923 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 04:48:31] 2026-04-01 02:47:05,884 | INFO     | PID=52344 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-01 04:48:31] 2026-04-01 02:47:05,884 | INFO     | .. there are 10 such processes running
[2026-04-01 04:48:31] 2026-04-01 02:47:05,885 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 04:48:31] 2026-04-01 02:47:05,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 04:48:31] 2026-04-01 02:47:05,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 04:48:31] 2026-04-01 02:47:08,239 | INFO     | [monitor] cgroup control has ended
[2026-04-01 04:48:31] 2026-04-01 02:47:08,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23306010466112)>', '<ExcThread(monitor, started 23305773135616)>']
[2026-04-01 04:48:31] 2026-04-01 02:47:08,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 04:48:31] 2026-04-01 02:47:08,900 | INFO     | [monitor] control thread has ended
[2026-04-01 04:48:31] 2026-04-01 02:47:13,654 | INFO     | all workflow threads have been joined
[2026-04-01 04:48:31] 2026-04-01 02:47:13,654 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 04:48:31] 2026-04-01 02:47:13,654 | INFO     | traces error code: 0
[2026-04-01 04:48:31] 2026-04-01 02:47:13,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 04:48:31] 2026-04-01 02:47:13,824 [wrapper] ==== pilot stdout END ====
[2026-04-01 04:48:31] 2026-04-01 02:47:13,827 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 04:48:31] 2026-04-01 02:47:13,829 [wrapper] pilotpid: 52344
[2026-04-01 04:48:31] 2026-04-01 02:47:13,832 [wrapper] Pilot exit status: 0
[2026-04-01 04:48:31] 2026-04-01 02:47:13,843 [wrapper] pandaids: 7072088805
[2026-04-01 04:48:31] 2026-04-01 02:47:13,920 [wrapper] cleanup supervisor_pilot  232578 52345
[2026-04-01 04:48:31] 2026-04-01 02:47:13,923 [wrapper] Test setup, not cleaning
[2026-04-01 04:48:31] 2026-04-01 02:47:13,925 [wrapper] apfmon messages muted
[2026-04-01 04:48:31] 2026-04-01 02:47:13,928 [wrapper] ==== wrapper stdout END ====
[2026-04-01 04:48:31] 2026-04-01 02:47:13,930 [wrapper] ==== wrapper stderr END ====
[2026-04-01 04:48:31]  *** Error codes and diagnostics ***
[2026-04-01 04:48:31]     "exeErrorCode": 0,
[2026-04-01 04:48:31]     "exeErrorDiag": "",
[2026-04-01 04:48:31]     "pilotErrorCode": 0,
[2026-04-01 04:48:31]     "pilotErrorDiag": "",
[2026-04-01 04:48:31]  *** Listing of results directory ***
[2026-04-01 04:48:31] total 420164
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc    585013 Mar 30 04:54 pilot3.tar.gz
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc      5118 Mar 30 04:56 queuedata.json
[2026-04-01 04:48:31] -rwx------. 1 boinc boinc     36322 Mar 30 04:56 runpilot2-wrapper.sh
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc       100 Apr  1 01:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 04:48:31] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 01:44 run_atlas
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc       105 Apr  1 01:44 job.xml
[2026-04-01 04:48:31] -rw-r--r--. 2 boinc boinc 225794713 Apr  1 01:44 EVNT.49263198._000299.pool.root.1
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc      6564 Apr  1 01:44 init_data.xml
[2026-04-01 04:48:31] -rw-r--r--. 2 boinc boinc     15845 Apr  1 01:44 start_atlas.sh
[2026-04-01 04:48:31] drwxrwx--x. 2 boinc boinc      4096 Apr  1 01:44 shared
[2026-04-01 04:48:31] -rw-r--r--. 2 boinc boinc    597541 Apr  1 01:44 input.tar.gz
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc         0 Apr  1 01:44 boinc_lockfile
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc      2573 Apr  1 01:44 pandaJob.out
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc   1005014 Apr  1 01:44 agis_schedconf.cvmfs.json
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc       445 Apr  1 01:44 workernode_map.json
[2026-04-01 04:48:31] drwx------. 5 boinc boinc      4096 Apr  1 01:44 pilot3
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc 196706694 Apr  1 04:45 HITS.49263200._007460.pool.root.1
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc       529 Apr  1 04:46 boinc_task_state.xml
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc      1033 Apr  1 04:46 memory_monitor_summary.json
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc   1511579 Apr  1 04:46 agis_ddmendpoints.agis.ALL.json
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc    354380 Apr  1 04:46 log.49263200._007460.job.log.tgz.1
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc      6400 Apr  1 04:46 heartbeat.json
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc        95 Apr  1 04:47 pilot_heartbeat.json
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc      4899 Apr  1 04:47 pilotlog.txt
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc   1547909 Apr  1 04:47 log.49263200._007460.job.log.1
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc       357 Apr  1 04:47 output.list
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc       620 Apr  1 04:47 runtime_log
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc   1925120 Apr  1 04:47 result.tar.gz
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc      9205 Apr  1 04:47 runtime_log.err
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc       665 Apr  1 04:47 QCDLDmAzHR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmFTMKDm7B8w0n.diag
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc        27 Apr  1 04:48 wrapper_checkpoint.txt
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc      8192 Apr  1 04:48 boinc_mmap_file
[2026-04-01 04:48:31] -rw-r--r--. 1 boinc boinc     20860 Apr  1 04:48 stderr.txt
[2026-04-01 04:48:31] HITS file was successfully produced:
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc 196706694 Apr  1 04:45 shared/HITS.pool.root.1
[2026-04-01 04:48:31]  *** Contents of shared directory: ***
[2026-04-01 04:48:31] total 415092
[2026-04-01 04:48:31] -rw-r--r--. 2 boinc boinc 225794713 Apr  1 01:44 ATLAS.root_0
[2026-04-01 04:48:31] -rw-r--r--. 2 boinc boinc     15845 Apr  1 01:44 start_atlas.sh
[2026-04-01 04:48:31] -rw-r--r--. 2 boinc boinc    597541 Apr  1 01:44 input.tar.gz
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc 196706694 Apr  1 04:45 HITS.pool.root.1
[2026-04-01 04:48:31] -rw-------. 1 boinc boinc   1925120 Apr  1 04:47 result.tar.gz
04:48:33 (48140): run_atlas exited; CPU time 42313.305197
04:48:33 (48140): called boinc_finish(0)

</stderr_txt>
]]>

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