Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:57:57 (3044044): wrapper (7.7.26015): starting
10:57:57 (3044044): wrapper: running run_atlas (--nthreads 12)
[2026-04-05 10:57:57] Arguments: --nthreads 12
[2026-04-05 10:57:57] Threads: 12
[2026-04-05 10:57:57] Checking for CVMFS
[2026-04-05 10:57:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 10:57:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 10:57:58] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 10:57:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 10:57:59] 2.13.3.0 3021178 16105 77832 158109 2 188 4059282 4096001 18776 130560 0 78578197 99.987 973910 2230 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-05 10:57:59] CVMFS is ok
[2026-04-05 10:57:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 10:57:59] Checking for apptainer binary...
[2026-04-05 10:57:59] apptainer is not installed, using version from CVMFS
[2026-04-05 10:57:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 10:58:01] epyc7v12
[2026-04-05 10:58:01] apptainer works
[2026-04-05 10:58:01] Set ATHENA_PROC_NUMBER=12
[2026-04-05 10:58:01] Set ATHENA_CORE_NUMBER=12
[2026-04-05 10:58:01] Starting ATLAS job with PandaID=7072075201
[2026-04-05 10:58:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31428/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 13:06:07]  *** The last 200 lines of the pilot log: ***
[2026-04-05 13:06:07] 2026-04-05 13:05:00,843 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 13:06:07] 2026-04-05 13:05:00,849 | INFO     | log transfer has been attempted: DONE
[2026-04-05 13:06:07] 2026-04-05 13:05:00,849 | INFO     | job 7072075201 has finished - writing final server update
[2026-04-05 13:06:07] 2026-04-05 13:05:00,850 | INFO     | total number of processed events: 400 (read)
[2026-04-05 13:06:07] 2026-04-05 13:05:00,923 | INFO     | using path: /opt/boinc/instance_homes/boinc_31428/slots/0/PanDA_Pilot-7072075201/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 13:06:07] 2026-04-05 13:05:00,924 | INFO     | extracted standard info from prmon json
[2026-04-05 13:06:07] 2026-04-05 13:05:00,927 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 13:06:07] 2026-04-05 13:05:00,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-05 13:06:07] 2026-04-05 13:05:00,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 13:06:07] 2026-04-05 13:05:00,928 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 13:06:07] 2026-04-05 13:05:00,932 | INFO     | fitting pss+swap vs Time
[2026-04-05 13:06:07] 2026-04-05 13:05:00,933 | INFO     | sum of square deviations: 591173875.0
[2026-04-05 13:06:07] 2026-04-05 13:05:00,936 | INFO     | sum of deviations: 28414197811.5
[2026-04-05 13:06:07] 2026-04-05 13:05:00,936 | INFO     | mean x: 1775390524.5
[2026-04-05 13:06:07] 2026-04-05 13:05:00,940 | INFO     | mean y: 2560644.4112903224
[2026-04-05 13:06:07] 2026-04-05 13:05:00,940 | INFO     | intersect: -85329859628.39886
[2026-04-05 13:06:07] 2026-04-05 13:05:00,940 | INFO     | chi2: 3.0978026223847026
[2026-04-05 13:06:07] 2026-04-05 13:05:00,941 | INFO     | sum of square deviations: 522502820.0
[2026-04-05 13:06:07] 2026-04-05 13:05:00,941 | INFO     | sum of deviations: 35801808534.0
[2026-04-05 13:06:07] 2026-04-05 13:05:00,942 | INFO     | mean x: 1775390372.0
[2026-04-05 13:06:07] 2026-04-05 13:05:00,942 | INFO     | mean y: 2576394.537815126
[2026-04-05 13:06:07] 2026-04-05 13:05:00,942 | INFO     | intersect: -121646884122.15575
[2026-04-05 13:06:07] 2026-04-05 13:05:00,942 | INFO     | chi2: 2.2757903632985546
[2026-04-05 13:06:07] 2026-04-05 13:05:00,942 | INFO     | current chi2=2.2757903632985546 (change=26.53533356664794 %)
[2026-04-05 13:06:07] 2026-04-05 13:05:00,943 | INFO     | sum of square deviations: 459366752.5
[2026-04-05 13:06:07] 2026-04-05 13:05:00,943 | INFO     | sum of deviations: 33994165979.499996
[2026-04-05 13:06:07] 2026-04-05 13:05:00,943 | INFO     | mean x: 1775390219.5
[2026-04-05 13:06:07] 2026-04-05 13:05:00,943 | INFO     | mean y: 2572025.99122807
[2026-04-05 13:06:07] 2026-04-05 13:05:00,944 | INFO     | intersect: -131380270706.11078
[2026-04-05 13:06:07] 2026-04-05 13:05:00,944 | INFO     | chi2: 2.276042542741288
[2026-04-05 13:06:07] 2026-04-05 13:05:00,947 | INFO     | current chi2=2.276042542741288 (change=-0.011080961005905063 %)
[2026-04-05 13:06:07] 2026-04-05 13:05:00,947 | INFO     | right removable region: 113
[2026-04-05 13:06:07] 2026-04-05 13:05:00,947 | INFO     | sum of square deviations: 522502820.0
[2026-04-05 13:06:07] 2026-04-05 13:05:00,948 | INFO     | sum of deviations: 1943826.0
[2026-04-05 13:06:07] 2026-04-05 13:05:00,948 | INFO     | mean x: 1775390677.0
[2026-04-05 13:06:07] 2026-04-05 13:05:00,948 | INFO     | mean y: 2623115.067226891
[2026-04-05 13:06:07] 2026-04-05 13:05:00,948 | INFO     | intersect: -3981730.736495665
[2026-04-05 13:06:07] 2026-04-05 13:05:00,949 | INFO     | chi2: 0.9693072094661971
[2026-04-05 13:06:07] 2026-04-05 13:05:00,949 | INFO     | current chi2=0.9693072094661971 (change=68.7098460546844 %)
[2026-04-05 13:06:07] 2026-04-05 13:05:00,949 | INFO     | sum of square deviations: 459366752.5
[2026-04-05 13:06:07] 2026-04-05 13:05:00,950 | INFO     | sum of deviations: -5439966275.0
[2026-04-05 13:06:07] 2026-04-05 13:05:00,950 | INFO     | mean x: 1775390829.5
[2026-04-05 13:06:07] 2026-04-05 13:05:00,952 | INFO     | mean y: 2636013.3684210526
[2026-04-05 13:06:07] 2026-04-05 13:05:00,952 | INFO     | intersect: 21027375363.48992
[2026-04-05 13:06:07] 2026-04-05 13:05:00,952 | INFO     | chi2: 0.8655877907015782
[2026-04-05 13:06:07] 2026-04-05 13:05:00,952 | INFO     | current chi2=0.8655877907015782 (change=10.700365967744915 %)
[2026-04-05 13:06:07] 2026-04-05 13:05:00,953 | INFO     | left removable region: 20
[2026-04-05 13:06:07] 2026-04-05 13:05:00,953 | INFO     | sum of square deviations: 249388862.0
[2026-04-05 13:06:07] 2026-04-05 13:05:00,953 | INFO     | sum of deviations: 989976564.0000001
[2026-04-05 13:06:07] 2026-04-05 13:05:00,953 | INFO     | mean x: 1775390799.0
[2026-04-05 13:06:07] 2026-04-05 13:05:00,953 | INFO     | mean y: 2659972.2580645164
[2026-04-05 13:06:07] 2026-04-05 13:05:00,954 | INFO     | intersect: -7044949407.150527
[2026-04-05 13:06:07] 2026-04-05 13:05:00,954 | INFO     | chi2: 0.00010186639323871774
[2026-04-05 13:06:07] 2026-04-05 13:05:00,956 | INFO     | current memory leak: 3.97 B/s (using 93 data points, chi2=0.00)
[2026-04-05 13:06:07] 2026-04-05 13:05:00,957 | INFO     | could have reported an average CPU frequency of 2388 MHz (8 samples)
[2026-04-05 13:06:07] 2026-04-05 13:05:00,957 | INFO     | ..............................
[2026-04-05 13:06:07] 2026-04-05 13:05:00,957 | INFO     | . Timing measurements:
[2026-04-05 13:06:07] 2026-04-05 13:05:00,957 | INFO     | . get job = 0 s
[2026-04-05 13:06:07] 2026-04-05 13:05:00,957 | INFO     | . initial setup = 16 s
[2026-04-05 13:06:07] 2026-04-05 13:05:00,957 | INFO     | . payload setup = 28 s
[2026-04-05 13:06:07] 2026-04-05 13:05:00,957 | INFO     | . stage-in = 0 s
[2026-04-05 13:06:07] 2026-04-05 13:05:00,957 | INFO     | . payload execution = 7532 s
[2026-04-05 13:06:07] 2026-04-05 13:05:00,958 | INFO     | . stage-out = 1 s
[2026-04-05 13:06:07] 2026-04-05 13:05:00,958 | INFO     | . log creation = 0 s
[2026-04-05 13:06:07] 2026-04-05 13:05:00,958 | INFO     | ..............................
[2026-04-05 13:06:07] 2026-04-05 13:05:01,621 | INFO     | 
[2026-04-05 13:06:07] 2026-04-05 13:05:01,621 | INFO     | job summary report
[2026-04-05 13:06:07] 2026-04-05 13:05:01,621 | INFO     | --------------------------------------------------
[2026-04-05 13:06:07] 2026-04-05 13:05:01,621 | INFO     | PanDA job id: 7072075201
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | task id: 49263191
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | errors: (none)
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | pilot state: finished 
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | transexitcode: 0
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | exeerrorcode: 0
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | exeerrordiag: 
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | exitcode: 0
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | exitmsg: OK
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | cpuconsumptiontime: 47068 s
[2026-04-05 13:06:07] 2026-04-05 13:05:01,622 | INFO     | nevents: 400
[2026-04-05 13:06:07] 2026-04-05 13:05:01,623 | INFO     | neventsw: 0
[2026-04-05 13:06:07] 2026-04-05 13:05:01,623 | INFO     | pid: 3053342
[2026-04-05 13:06:07] 2026-04-05 13:05:01,623 | INFO     | pgrp: 3053342
[2026-04-05 13:06:07] 2026-04-05 13:05:01,623 | INFO     | corecount: 12
[2026-04-05 13:06:07] 2026-04-05 13:05:01,623 | INFO     | event service: False
[2026-04-05 13:06:07] 2026-04-05 13:05:01,623 | INFO     | sizes: {0: 2279160, 1: 2279925, 2: 2280329, 7565: 2308129, 7567: 2317173, 7568: 2317229, 7570: 2317551}
[2026-04-05 13:06:07] 2026-04-05 13:05:01,623 | INFO     | --------------------------------------------------
[2026-04-05 13:06:07] 2026-04-05 13:05:01,623 | INFO     | 
[2026-04-05 13:06:07] 2026-04-05 13:05:01,623 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-04-05 13:06:07] 2026-04-05 13:05:01,692 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,692 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,692 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,692 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,694 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 13:06:07] 2026-04-05 13:05:01,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,694 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 13:06:07] 2026-04-05 13:05:01,697 | INFO     | job 7072075201 has completed (purged errors)
[2026-04-05 13:06:07] 2026-04-05 13:05:01,697 | INFO     | overall cleanup function is called
[2026-04-05 13:06:07] 2026-04-05 13:05:02,707 | INFO     | --- collectZombieJob: --- 10, [3053342]
[2026-04-05 13:06:07] 2026-04-05 13:05:02,707 | INFO     | zombie collector waiting for pid 3053342
[2026-04-05 13:06:07] 2026-04-05 13:05:02,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 13:06:07] 2026-04-05 13:05:02,707 | INFO     | collected zombie processes
[2026-04-05 13:06:07] 2026-04-05 13:05:02,708 | INFO     | will attempt to kill all subprocesses of pid=3053342
[2026-04-05 13:06:07] 2026-04-05 13:05:03,803 | INFO     | process IDs to be killed: [3053342] (in reverse order)
[2026-04-05 13:06:07] 2026-04-05 13:05:04,170 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 13:06:07] 2026-04-05 13:05:04,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 13:06:07] 2026-04-05 13:05:04,204 | INFO     | did not find any defunct processes belonging to 3053342
[2026-04-05 13:06:07] 2026-04-05 13:05:04,239 | INFO     | did not find any defunct processes belonging to 3053342
[2026-04-05 13:06:07] 2026-04-05 13:05:04,240 | INFO     | ready for new job
[2026-04-05 13:06:07] 2026-04-05 13:05:04,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-05 13:06:07] 2026-04-05 13:05:04,245 | INFO     | **************************************
[2026-04-05 13:06:07] 2026-04-05 13:05:04,246 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-05 13:06:07] 2026-04-05 13:05:04,246 | INFO     | **************************************
[2026-04-05 13:06:07] 2026-04-05 13:05:04,246 | INFO     | 
[2026-04-05 13:06:07] 2026-04-05 13:05:04,261 | INFO     | architecture information:
[2026-04-05 13:06:07] 2026-04-05 13:05:04,267 | INFO     | executing command: cat /etc/os-release
[2026-04-05 13:06:07] 2026-04-05 13:05:04,311 | INFO     | cat /etc/os-release:
[2026-04-05 13:06:07] NAME="CentOS Linux"
[2026-04-05 13:06:07] VERSION="7 (Core)"
[2026-04-05 13:06:07] ID="centos"
[2026-04-05 13:06:07] ID_LIKE="rhel fedora"
[2026-04-05 13:06:07] VERSION_ID="7"
[2026-04-05 13:06:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 13:06:07] ANSI_COLOR="0;31"
[2026-04-05 13:06:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 13:06:07] HOME_URL="https://www.centos.org/"
[2026-04-05 13:06:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 13:06:07] 
[2026-04-05 13:06:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 13:06:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 13:06:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 13:06:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 13:06:07] 
[2026-04-05 13:06:07] 2026-04-05 13:05:04,312 | INFO     | **************************************
[2026-04-05 13:06:07] 2026-04-05 13:05:04,816 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31428/slots/0
[2026-04-05 13:06:07] 2026-04-05 13:05:04,857 | INFO     | sufficient remaining disk space (396786401280 B)
[2026-04-05 13:06:07] 2026-04-05 13:05:04,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 13:06:07] 2026-04-05 13:05:04,857 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 13:06:07] 2026-04-05 13:05:04,857 | INFO     | update_server=False
[2026-04-05 13:06:07] 2026-04-05 13:05:04,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-05 13:06:07] 2026-04-05 13:05:04,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 13:06:07] 2026-04-05 13:05:04,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 13:06:07] 2026-04-05 13:05:04,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 13:06:07] 2026-04-05 13:05:04,864 | INFO     | aborting loop
[2026-04-05 13:06:07] 2026-04-05 13:05:04,897 | INFO     | all data control threads have been joined
[2026-04-05 13:06:07] 2026-04-05 13:05:04,985 | INFO     | all job control threads have been joined
[2026-04-05 13:06:07] 2026-04-05 13:05:05,496 | INFO     | all payload control threads have been joined
[2026-04-05 13:06:07] 2026-04-05 13:05:05,866 | INFO     | [job] retrieve thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:05,869 | INFO     | [job] job monitor thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:05,902 | INFO     | [data] control thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:05,946 | INFO     | [job] validate thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:05,951 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:05,994 | INFO     | [job] control thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:06,023 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:06,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 13:06:07] 2026-04-05 13:05:06,308 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:06,457 | INFO     | [payload] failed_post thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:06,501 | INFO     | [payload] control thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:06,749 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:06,869 | INFO     | [data] copytool_out thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:06,935 | INFO     | [payload] validate_post thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:07,200 | INFO     | [job] queue monitor thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:07,251 | INFO     | [data] copytool_in thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:08,868 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 13:06:07] 2026-04-05 13:05:34,121 | INFO     | PID=3048318 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 13:06:07] 2026-04-05 13:05:34,121 | INFO     | .. there are 15 such processes running
[2026-04-05 13:06:07] 2026-04-05 13:05:34,122 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 13:06:07] 2026-04-05 13:05:34,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 13:06:07] 2026-04-05 13:05:34,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 13:06:07] 2026-04-05 13:06:01,241 | INFO     | [monitor] cgroup control has ended
[2026-04-05 13:06:07] 2026-04-05 13:06:01,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124678141237056)>', '<ExcThread(monitor, started 124677464782592)>']
[2026-04-05 13:06:07] 2026-04-05 13:06:02,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 13:06:07] 2026-04-05 13:06:02,267 | INFO     | [monitor] control thread has ended
[2026-04-05 13:06:07] 2026-04-05 13:06:06,934 | INFO     | all workflow threads have been joined
[2026-04-05 13:06:07] 2026-04-05 13:06:06,934 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 13:06:07] 2026-04-05 13:06:06,935 | INFO     | traces error code: 0
[2026-04-05 13:06:07] 2026-04-05 13:06:06,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 13:06:07] 2026-04-05 13:06:07,109 [wrapper] ==== pilot stdout END ====
[2026-04-05 13:06:07] 2026-04-05 13:06:07,116 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 13:06:07] 2026-04-05 13:06:07,123 [wrapper] pilotpid: 3048318
[2026-04-05 13:06:07] 2026-04-05 13:06:07,132 [wrapper] Pilot exit status: 0
[2026-04-05 13:06:07] 2026-04-05 13:06:07,163 [wrapper] pandaids: 7072075201
[2026-04-05 13:06:07] 2026-04-05 13:06:07,346 [wrapper] cleanup supervisor_pilot 3234983 3048319
[2026-04-05 13:06:07] 2026-04-05 13:06:07,358 [wrapper] Test setup, not cleaning
[2026-04-05 13:06:07] 2026-04-05 13:06:07,366 [wrapper] apfmon messages muted
[2026-04-05 13:06:07] 2026-04-05 13:06:07,375 [wrapper] ==== wrapper stdout END ====
[2026-04-05 13:06:07] 2026-04-05 13:06:07,386 [wrapper] ==== wrapper stderr END ====
[2026-04-05 13:06:07]  *** Error codes and diagnostics ***
[2026-04-05 13:06:07]     "exeErrorCode": 0,
[2026-04-05 13:06:07]     "exeErrorDiag": "",
[2026-04-05 13:06:07]     "pilotErrorCode": 0,
[2026-04-05 13:06:07]     "pilotErrorDiag": "",
[2026-04-05 13:06:07]  *** Listing of results directory ***
[2026-04-05 13:06:07] total 414240
[2026-04-05 13:06:07] -rw-r--r-- 1 boinc boinc    585013 Mar 30 02:42 pilot3.tar.gz
[2026-04-05 13:06:07] -rw-r--r-- 1 boinc boinc      5118 Mar 30 02:52 queuedata.json
[2026-04-05 13:06:07] -rwx------ 1 boinc boinc     36322 Mar 30 02:53 runpilot2-wrapper.sh
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc       100 Apr  5 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 13:06:07] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 10:57 run_atlas
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc       105 Apr  5 10:57 job.xml
[2026-04-05 13:06:07] -rw-r--r-- 2 boinc boinc 224013756 Apr  5 10:57 EVNT.49263189._000358.pool.root.1
[2026-04-05 13:06:07] -rw-r--r-- 2 boinc boinc     15845 Apr  5 10:57 start_atlas.sh
[2026-04-05 13:06:07] drwxrwx--x 2 boinc boinc      4096 Apr  5 10:57 shared
[2026-04-05 13:06:07] -rw-r--r-- 2 boinc boinc    597543 Apr  5 10:57 input.tar.gz
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc      6555 Apr  5 10:57 init_data.xml
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc         0 Apr  5 10:57 boinc_setup_complete
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc         0 Apr  5 10:57 boinc_lockfile
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc      2575 Apr  5 10:58 pandaJob.out
[2026-04-05 13:06:07] -rw------- 1 boinc boinc   1005096 Apr  5 10:58 agis_schedconf.cvmfs.json
[2026-04-05 13:06:07] -rw------- 1 boinc boinc   1511579 Apr  5 10:58 agis_ddmendpoints.agis.ALL.json
[2026-04-05 13:06:07] -rw------- 1 boinc boinc       420 Apr  5 10:58 workernode_map.json
[2026-04-05 13:06:07] drwx------ 5 boinc boinc      4096 Apr  5 10:58 pilot3
[2026-04-05 13:06:07] -rw------- 1 boinc boinc 193250070 Apr  5 13:04 HITS.49263191._004322.pool.root.1
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc       529 Apr  5 13:04 boinc_task_state.xml
[2026-04-05 13:06:07] -rw------- 1 boinc boinc      1021 Apr  5 13:04 memory_monitor_summary.json
[2026-04-05 13:06:07] -rw------- 1 boinc boinc    440475 Apr  5 13:04 log.49263191._004322.job.log.tgz.1
[2026-04-05 13:06:07] -rw------- 1 boinc boinc      6272 Apr  5 13:05 heartbeat.json
[2026-04-05 13:06:07] -rw------- 1 boinc boinc        95 Apr  5 13:05 pilot_heartbeat.json
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc        27 Apr  5 13:06 wrapper_checkpoint.txt
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc      8192 Apr  5 13:06 boinc_mmap_file
[2026-04-05 13:06:07] -rw------- 1 boinc boinc      4844 Apr  5 13:06 pilotlog.txt
[2026-04-05 13:06:07] -rw------- 1 boinc boinc   1048972 Apr  5 13:06 log.49263191._004322.job.log.1
[2026-04-05 13:06:07] -rw------- 1 boinc boinc       357 Apr  5 13:06 output.list
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc       620 Apr  5 13:06 runtime_log
[2026-04-05 13:06:07] -rw------- 1 boinc boinc   1505280 Apr  5 13:06 result.tar.gz
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc      9166 Apr  5 13:06 runtime_log.err
[2026-04-05 13:06:07] -rw------- 1 boinc boinc       653 Apr  5 13:06 SqzLDmavHR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmEQMKDmbF7Zhn.diag
[2026-04-05 13:06:07] -rw-rw-r-- 1 boinc boinc     20847 Apr  5 13:06 stderr.txt
[2026-04-05 13:06:07] HITS file was successfully produced:
[2026-04-05 13:06:07] -rw------- 1 boinc boinc 193250070 Apr  5 13:04 shared/HITS.pool.root.1
[2026-04-05 13:06:07]  *** Contents of shared directory: ***
[2026-04-05 13:06:07] total 409568
[2026-04-05 13:06:07] -rw-r--r-- 2 boinc boinc 224013756 Apr  5 10:57 ATLAS.root_0
[2026-04-05 13:06:07] -rw-r--r-- 2 boinc boinc     15845 Apr  5 10:57 start_atlas.sh
[2026-04-05 13:06:07] -rw-r--r-- 2 boinc boinc    597543 Apr  5 10:57 input.tar.gz
[2026-04-05 13:06:07] -rw------- 1 boinc boinc 193250070 Apr  5 13:04 HITS.pool.root.1
[2026-04-05 13:06:07] -rw------- 1 boinc boinc   1505280 Apr  5 13:06 result.tar.gz
13:06:09 (3044044): run_atlas exited; CPU time 47509.068214
13:06:09 (3044044): called boinc_finish(0)

</stderr_txt>
]]>

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