Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:00:12 (3225132): wrapper (7.7.26015): starting
03:00:12 (3225132): wrapper: running run_atlas (--nthreads 4)
[2026-04-03 03:00:12] Arguments: --nthreads 4
[2026-04-03 03:00:12] Threads: 4
[2026-04-03 03:00:12] Checking for CVMFS
[2026-04-03 03:00:12] No cvmfs_config command found, will try listing directly
[2026-04-03 03:00:12] CVMFS is ok
[2026-04-03 03:00:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 03:00:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 03:00:12] Further information can be found at the LHC@home message board.
[2026-04-03 03:00:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 03:00:12] Checking for apptainer binary...
[2026-04-03 03:00:12] which: no apptainer in ((null))
[2026-04-03 03:00:12] apptainer is not installed, using version from CVMFS
[2026-04-03 03:00:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 03:00:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-03 03:00:12] apptainer works
[2026-04-03 03:00:12] Set ATHENA_PROC_NUMBER=4
[2026-04-03 03:00:12] Set ATHENA_CORE_NUMBER=4
[2026-04-03 03:00:12] Starting ATLAS job with PandaID=7072075941
[2026-04-03 03:00:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 05:43:57]  *** The last 200 lines of the pilot log: ***
[2026-04-03 05:43:57] 2026-04-03 03:43:11,116 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 05:43:57] 2026-04-03 03:43:11,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-03 05:43:57] 2026-04-03 03:43:11,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 05:43:57] 2026-04-03 03:43:11,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 05:43:57] 2026-04-03 03:43:11,119 | INFO     | fitting pss+swap vs Time
[2026-04-03 05:43:57] 2026-04-03 03:43:11,120 | INFO     | sum of square deviations: 1270051720.0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,121 | INFO     | sum of deviations: 13393450238.000004
[2026-04-03 05:43:57] 2026-04-03 03:43:11,121 | INFO     | mean x: 1775182921.5
[2026-04-03 05:43:57] 2026-04-03 03:43:11,121 | INFO     | mean y: 2292520.975
[2026-04-03 05:43:57] 2026-04-03 03:43:11,121 | INFO     | intersect: -18718066459.72676
[2026-04-03 05:43:57] 2026-04-03 03:43:11,121 | INFO     | chi2: 2.1401736094111965
[2026-04-03 05:43:57] 2026-04-03 03:43:11,121 | INFO     | sum of square deviations: 1154663510.0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,122 | INFO     | sum of deviations: 22618202138.999996
[2026-04-03 05:43:57] 2026-04-03 03:43:11,122 | INFO     | mean x: 1775182769.0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,123 | INFO     | mean y: 2304382.3806451615
[2026-04-03 05:43:57] 2026-04-03 03:43:11,123 | INFO     | intersect: -34770980089.83043
[2026-04-03 05:43:57] 2026-04-03 03:43:11,123 | INFO     | chi2: 1.3633513342210928
[2026-04-03 05:43:57] 2026-04-03 03:43:11,123 | INFO     | current chi2=1.3633513342210928 (change=36.297161677637106 %)
[2026-04-03 05:43:57] 2026-04-03 03:43:11,123 | INFO     | sum of square deviations: 1046484737.5
[2026-04-03 05:43:57] 2026-04-03 03:43:11,124 | INFO     | sum of deviations: 21795432492.0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,124 | INFO     | mean x: 1775182616.5
[2026-04-03 05:43:57] 2026-04-03 03:43:11,125 | INFO     | mean y: 2303222.12
[2026-04-03 05:43:57] 2026-04-03 03:43:11,125 | INFO     | intersect: -36969925318.28685
[2026-04-03 05:43:57] 2026-04-03 03:43:11,125 | INFO     | chi2: 1.3642848489401038
[2026-04-03 05:43:57] 2026-04-03 03:43:11,125 | INFO     | current chi2=1.3642848489401038 (change=-0.06847205819799747 %)
[2026-04-03 05:43:57] 2026-04-03 03:43:11,125 | INFO     | right removable region: 149
[2026-04-03 05:43:57] 2026-04-03 03:43:11,125 | INFO     | sum of square deviations: 1154663510.0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,126 | INFO     | sum of deviations: -7676910084.999999
[2026-04-03 05:43:57] 2026-04-03 03:43:11,126 | INFO     | mean x: 1775183074.0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,126 | INFO     | mean y: 2319943.2838709676
[2026-04-03 05:43:57] 2026-04-03 03:43:11,127 | INFO     | intersect: 11804824071.531502
[2026-04-03 05:43:57] 2026-04-03 03:43:11,127 | INFO     | chi2: 0.8040412029739212
[2026-04-03 05:43:57] 2026-04-03 03:43:11,127 | INFO     | current chi2=0.8040412029739212 (change=62.431028985768656 %)
[2026-04-03 05:43:57] 2026-04-03 03:43:11,127 | INFO     | sum of square deviations: 1046484737.5
[2026-04-03 05:43:57] 2026-04-03 03:43:11,128 | INFO     | sum of deviations: -7832352359.0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,128 | INFO     | mean x: 1775183226.5
[2026-04-03 05:43:57] 2026-04-03 03:43:11,128 | INFO     | mean y: 2320136.8933333335
[2026-04-03 05:43:57] 2026-04-03 03:43:11,128 | INFO     | intersect: 13288572705.61224
[2026-04-03 05:43:57] 2026-04-03 03:43:11,129 | INFO     | chi2: 0.8017127771814208
[2026-04-03 05:43:57] 2026-04-03 03:43:11,129 | INFO     | current chi2=0.8017127771814208 (change=0.28959035729615445 %)
[2026-04-03 05:43:57] 2026-04-03 03:43:11,129 | INFO     | left removable region: 20
[2026-04-03 05:43:57] 2026-04-03 03:43:11,129 | INFO     | sum of square deviations: 665612480.0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,130 | INFO     | sum of deviations: 1204523263.0000002
[2026-04-03 05:43:57] 2026-04-03 03:43:11,130 | INFO     | mean x: 1775183196.0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,130 | INFO     | mean y: 2333792.6744186045
[2026-04-03 05:43:57] 2026-04-03 03:43:11,130 | INFO     | intersect: -3210120180.046599
[2026-04-03 05:43:57] 2026-04-03 03:43:11,130 | INFO     | chi2: 0.0002066528669912536
[2026-04-03 05:43:57] 2026-04-03 03:43:11,130 | INFO     | current memory leak: 1.81 B/s (using 129 data points, chi2=0.00)
[2026-04-03 05:43:57] 2026-04-03 03:43:11,131 | INFO     | could have reported an average CPU frequency of 2703 MHz (9 samples)
[2026-04-03 05:43:57] 2026-04-03 03:43:11,131 | INFO     | ..............................
[2026-04-03 05:43:57] 2026-04-03 03:43:11,131 | INFO     | . Timing measurements:
[2026-04-03 05:43:57] 2026-04-03 03:43:11,131 | INFO     | . get job = 0 s
[2026-04-03 05:43:57] 2026-04-03 03:43:11,131 | INFO     | . initial setup = 8 s
[2026-04-03 05:43:57] 2026-04-03 03:43:11,131 | INFO     | . payload setup = 16 s
[2026-04-03 05:43:57] 2026-04-03 03:43:11,131 | INFO     | . stage-in = 0 s
[2026-04-03 05:43:57] 2026-04-03 03:43:11,131 | INFO     | . payload execution = 9722 s
[2026-04-03 05:43:57] 2026-04-03 03:43:11,131 | INFO     | . stage-out = 0 s
[2026-04-03 05:43:57] 2026-04-03 03:43:11,131 | INFO     | . log creation = 0 s
[2026-04-03 05:43:57] 2026-04-03 03:43:11,132 | INFO     | ..............................
[2026-04-03 05:43:57] 2026-04-03 03:43:11,230 | INFO     | 
[2026-04-03 05:43:57] 2026-04-03 03:43:11,230 | INFO     | job summary report
[2026-04-03 05:43:57] 2026-04-03 03:43:11,230 | INFO     | --------------------------------------------------
[2026-04-03 05:43:57] 2026-04-03 03:43:11,230 | INFO     | PanDA job id: 7072075941
[2026-04-03 05:43:57] 2026-04-03 03:43:11,230 | INFO     | task id: 49263191
[2026-04-03 05:43:57] 2026-04-03 03:43:11,230 | INFO     | errors: (none)
[2026-04-03 05:43:57] 2026-04-03 03:43:11,230 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 05:43:57] 2026-04-03 03:43:11,230 | INFO     | pilot state: finished 
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | transexitcode: 0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | exeerrorcode: 0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | exeerrordiag: 
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | exitcode: 0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | exitmsg: OK
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | cpuconsumptiontime: 36854 s
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | nevents: 400
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | neventsw: 0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | pid: 3234582
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | pgrp: 3234582
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | corecount: 4
[2026-04-03 05:43:57] 2026-04-03 03:43:11,231 | INFO     | event service: False
[2026-04-03 05:43:57] 2026-04-03 03:43:11,232 | INFO     | sizes: {0: 2280056, 1: 2280262, 11: 2280290, 9742: 2309332, 9743: 2318612}
[2026-04-03 05:43:57] 2026-04-03 03:43:11,232 | INFO     | --------------------------------------------------
[2026-04-03 05:43:57] 2026-04-03 03:43:11,232 | INFO     | 
[2026-04-03 05:43:57] 2026-04-03 03:43:11,232 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/0
[2026-04-03 05:43:57] 2026-04-03 03:43:11,265 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,266 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,266 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,266 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,268 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 05:43:57] 2026-04-03 03:43:11,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,268 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 05:43:57] 2026-04-03 03:43:11,268 | INFO     | job 7072075941 has completed (purged errors)
[2026-04-03 05:43:57] 2026-04-03 03:43:11,268 | INFO     | overall cleanup function is called
[2026-04-03 05:43:57] 2026-04-03 03:43:12,277 | INFO     | --- collectZombieJob: --- 10, [3234582]
[2026-04-03 05:43:57] 2026-04-03 03:43:12,277 | INFO     | zombie collector waiting for pid 3234582
[2026-04-03 05:43:57] 2026-04-03 03:43:12,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 05:43:57] 2026-04-03 03:43:12,277 | INFO     | collected zombie processes
[2026-04-03 05:43:57] 2026-04-03 03:43:12,277 | INFO     | will attempt to kill all subprocesses of pid=3234582
[2026-04-03 05:43:57] 2026-04-03 03:43:13,198 | INFO     | process IDs to be killed: [3234582] (in reverse order)
[2026-04-03 05:43:57] 2026-04-03 03:43:13,584 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 05:43:57] 2026-04-03 03:43:13,584 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 05:43:57] 2026-04-03 03:43:13,682 | INFO     | did not find any defunct processes belonging to 3234582
[2026-04-03 05:43:57] 2026-04-03 03:43:13,752 | INFO     | did not find any defunct processes belonging to 3234582
[2026-04-03 05:43:57] 2026-04-03 03:43:13,752 | INFO     | ready for new job
[2026-04-03 05:43:57] 2026-04-03 03:43:13,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 05:43:57] 2026-04-03 03:43:13,755 | INFO     | **************************************
[2026-04-03 05:43:57] 2026-04-03 03:43:13,755 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 05:43:57] 2026-04-03 03:43:13,755 | INFO     | **************************************
[2026-04-03 05:43:57] 2026-04-03 03:43:13,755 | INFO     | 
[2026-04-03 05:43:57] 2026-04-03 03:43:13,768 | INFO     | architecture information:
[2026-04-03 05:43:57] 2026-04-03 03:43:13,769 | INFO     | executing command: cat /etc/os-release
[2026-04-03 05:43:57] 2026-04-03 03:43:13,797 | INFO     | cat /etc/os-release:
[2026-04-03 05:43:57] NAME="CentOS Linux"
[2026-04-03 05:43:57] VERSION="7 (Core)"
[2026-04-03 05:43:57] ID="centos"
[2026-04-03 05:43:57] ID_LIKE="rhel fedora"
[2026-04-03 05:43:57] VERSION_ID="7"
[2026-04-03 05:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 05:43:57] ANSI_COLOR="0;31"
[2026-04-03 05:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 05:43:57] HOME_URL="https://www.centos.org/"
[2026-04-03 05:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 05:43:57] 
[2026-04-03 05:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 05:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 05:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 05:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 05:43:57] 
[2026-04-03 05:43:57] 2026-04-03 03:43:13,798 | INFO     | **************************************
[2026-04-03 05:43:57] 2026-04-03 03:43:13,995 | WARNING  | process 3234582 can no longer be monitored (due to stat problems) - aborting
[2026-04-03 05:43:57] 2026-04-03 03:43:14,300 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/0
[2026-04-03 05:43:57] 2026-04-03 03:43:14,338 | INFO     | sufficient remaining disk space (291835478016 B)
[2026-04-03 05:43:57] 2026-04-03 03:43:14,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 05:43:57] 2026-04-03 03:43:14,340 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 05:43:57] 2026-04-03 03:43:14,340 | INFO     | update_server=False
[2026-04-03 05:43:57] 2026-04-03 03:43:14,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 05:43:57] 2026-04-03 03:43:14,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 05:43:57] 2026-04-03 03:43:14,557 | INFO     | using path: /var/lib/boinc/var/slot128/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 05:43:57] 2026-04-03 03:43:14,568 | INFO     | all job control threads have been joined
[2026-04-03 05:43:57] 2026-04-03 03:43:14,884 | INFO     | all data control threads have been joined
[2026-04-03 05:43:57] 2026-04-03 03:43:15,340 | INFO     | number of running child processes to parent process 3234582: 1
[2026-04-03 05:43:57] 2026-04-03 03:43:15,343 | INFO     | maximum number of monitored processes: 6
[2026-04-03 05:43:57] 2026-04-03 03:43:15,344 | INFO     | aborting job monitoring since job object (job id=7072075941) has expired
[2026-04-03 05:43:57] 2026-04-03 03:43:15,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 05:43:57] 2026-04-03 03:43:15,344 | INFO     | will abort loop
[2026-04-03 05:43:57] 2026-04-03 03:43:15,343 | INFO     | [job] retrieve thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:15,388 | INFO     | [payload] failed_post thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:15,454 | INFO     | [data] copytool_in thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:15,455 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:15,485 | INFO     | all payload control threads have been joined
[2026-04-03 05:43:57] 2026-04-03 03:43:15,574 | INFO     | [job] control thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:15,817 | INFO     | [payload] validate_post thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:15,889 | INFO     | [data] control thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:16,008 | INFO     | [job] validate thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:16,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 05:43:57] 2026-04-03 03:43:16,347 | INFO     | [data] copytool_out thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:16,349 | INFO     | [job] job monitor thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:16,490 | INFO     | [payload] control thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:16,695 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:16,776 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:17,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 05:43:57] 2026-04-03 03:43:17,245 | INFO     | [job] queue monitor thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:21,097 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:24,624 | INFO     | job.realtimelogging is not enabled
[2026-04-03 05:43:57] 2026-04-03 03:43:25,629 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 05:43:57] 2026-04-03 03:43:44,637 | INFO     | PID=3229265 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-03 05:43:57] 2026-04-03 03:43:44,638 | INFO     | .. there are 22 such processes running
[2026-04-03 05:43:57] 2026-04-03 03:43:44,638 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 05:43:57] 2026-04-03 03:43:44,638 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 05:43:57] 2026-04-03 03:43:44,638 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 05:43:57] 2026-04-03 03:43:52,183 | INFO     | [monitor] cgroup control has ended
[2026-04-03 05:43:57] 2026-04-03 03:43:52,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22578208220992)>', '<ExcThread(monitor, started 22577900672768)>']
[2026-04-03 05:43:57] 2026-04-03 03:43:52,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 05:43:57] 2026-04-03 03:43:52,673 | INFO     | [monitor] control thread has ended
[2026-04-03 05:43:57] 2026-04-03 03:43:57,371 | INFO     | all workflow threads have been joined
[2026-04-03 05:43:57] 2026-04-03 03:43:57,371 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 05:43:57] 2026-04-03 03:43:57,371 | INFO     | traces error code: 0
[2026-04-03 05:43:57] 2026-04-03 03:43:57,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 05:43:57] 2026-04-03 03:43:57,576 [wrapper] ==== pilot stdout END ====
[2026-04-03 05:43:57] 2026-04-03 03:43:57,580 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 05:43:57] 2026-04-03 03:43:57,584 [wrapper] pilotpid: 3229265
[2026-04-03 05:43:57] 2026-04-03 03:43:57,589 [wrapper] Pilot exit status: 0
[2026-04-03 05:43:57] 2026-04-03 03:43:57,606 [wrapper] pandaids: 7072075941
[2026-04-03 05:43:57] 2026-04-03 03:43:57,816 [wrapper] cleanup supervisor_pilot 3579512 3229266
[2026-04-03 05:43:57] 2026-04-03 03:43:57,822 [wrapper] Test setup, not cleaning
[2026-04-03 05:43:57] 2026-04-03 03:43:57,827 [wrapper] apfmon messages muted
[2026-04-03 05:43:57] 2026-04-03 03:43:57,831 [wrapper] ==== wrapper stdout END ====
[2026-04-03 05:43:57] 2026-04-03 03:43:57,835 [wrapper] ==== wrapper stderr END ====
[2026-04-03 05:43:57]  *** Error codes and diagnostics ***
[2026-04-03 05:43:57]     "exeErrorCode": 0,
[2026-04-03 05:43:57]     "exeErrorDiag": "",
[2026-04-03 05:43:57]     "pilotErrorCode": 0,
[2026-04-03 05:43:57]     "pilotErrorDiag": "",
[2026-04-03 05:43:57]  *** Listing of results directory ***
[2026-04-03 05:43:57] total 418356
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc    585013 Mar 30 04:42 pilot3.tar.gz
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc      5118 Mar 30 04:44 queuedata.json
[2026-04-03 05:43:57] -rwx------. 1 boinc boinc     36322 Mar 30 04:46 runpilot2-wrapper.sh
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc       100 Apr  3 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 05:43:57] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 03:00 run_atlas
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc       105 Apr  3 03:00 job.xml
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc      6624 Apr  3 03:00 init_data.xml
[2026-04-03 05:43:57] -rw-r--r--. 2 boinc boinc 226165843 Apr  3 03:00 EVNT.49263189._000116.pool.root.1
[2026-04-03 05:43:57] -rw-r--r--. 2 boinc boinc     15845 Apr  3 03:00 start_atlas.sh
[2026-04-03 05:43:57] drwxrwx--x. 2 boinc boinc      4096 Apr  3 03:00 shared
[2026-04-03 05:43:57] -rw-r--r--. 2 boinc boinc    597543 Apr  3 03:00 input.tar.gz
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc         0 Apr  3 03:00 boinc_lockfile
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc      2575 Apr  3 03:00 pandaJob.out
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc   1005191 Apr  3 03:00 agis_schedconf.cvmfs.json
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc   1511579 Apr  3 03:00 agis_ddmendpoints.agis.ALL.json
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc       444 Apr  3 03:00 workernode_map.json
[2026-04-03 05:43:57] drwx------. 5 boinc boinc      4096 Apr  3 03:00 pilot3
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc 194866977 Apr  3 05:42 HITS.49263191._004768.pool.root.1
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc       529 Apr  3 05:42 boinc_task_state.xml
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc        95 Apr  3 05:42 pilot_heartbeat.json
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc      1042 Apr  3 05:43 memory_monitor_summary.json
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc    347439 Apr  3 05:43 log.49263191._004768.job.log.tgz.1
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc      6353 Apr  3 05:43 heartbeat.json
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc        27 Apr  3 05:43 wrapper_checkpoint.txt
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc      8192 Apr  3 05:43 boinc_mmap_file
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc      5437 Apr  3 05:43 pilotlog.txt
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc   1365916 Apr  3 05:43 log.49263191._004768.job.log.1
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc       357 Apr  3 05:43 output.list
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc       620 Apr  3 05:43 runtime_log
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc   1730560 Apr  3 05:43 result.tar.gz
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc      9221 Apr  3 05:43 runtime_log.err
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc       663 Apr  3 05:43 Es3LDm7oHR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmaUOKDmT0bmqn.diag
[2026-04-03 05:43:57] -rw-r--r--. 1 boinc boinc     20829 Apr  3 05:43 stderr.txt
[2026-04-03 05:43:57] HITS file was successfully produced:
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc 194866977 Apr  3 05:42 shared/HITS.pool.root.1
[2026-04-03 05:43:57]  *** Contents of shared directory: ***
[2026-04-03 05:43:57] total 413468
[2026-04-03 05:43:57] -rw-r--r--. 2 boinc boinc 226165843 Apr  3 03:00 ATLAS.root_0
[2026-04-03 05:43:57] -rw-r--r--. 2 boinc boinc     15845 Apr  3 03:00 start_atlas.sh
[2026-04-03 05:43:57] -rw-r--r--. 2 boinc boinc    597543 Apr  3 03:00 input.tar.gz
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc 194866977 Apr  3 05:42 HITS.pool.root.1
[2026-04-03 05:43:57] -rw-------. 1 boinc boinc   1730560 Apr  3 05:43 result.tar.gz
05:43:59 (3225132): run_atlas exited; CPU time 37491.059268
05:43:59 (3225132): called boinc_finish(0)

</stderr_txt>
]]>

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