Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:51 (32756): wrapper (7.7.26015): starting
13:21:51 (32756): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 13:21:51] Arguments: --nthreads 8
[2026-03-30 13:21:51] Threads: 8
[2026-03-30 13:21:51] Checking for CVMFS
[2026-03-30 13:21:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 13:21:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 13:21:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 13:21:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 13:21:55] 2.11.2.0 4857 150549 135792 157880 3 53 20625638 25165825 4688 130560 160 45335544 99.834 33511962 1087 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-30 13:21:55] CVMFS is ok
[2026-03-30 13:21:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 13:21:55] Checking for apptainer binary...
[2026-03-30 13:21:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 13:21:55] Running /usr/bin/apptainer --version
[2026-03-30 13:21:55] apptainer version 1.3.2-1.el7
[2026-03-30 13:21:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 13:22:00] cg-vwn479.simple-grid.lan
[2026-03-30 13:22:00] apptainer works
[2026-03-30 13:22:00] Set ATHENA_PROC_NUMBER=8
[2026-03-30 13:22:00] Set ATHENA_CORE_NUMBER=8
[2026-03-30 13:22:01] Starting ATLAS job with PandaID=7073837333
[2026-03-30 13:22:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 21:08:31]  *** The last 200 lines of the pilot log: ***
[2026-03-30 21:08:31] 2026-03-30 19:07:24,622 | INFO     | total number of processed events: 400 (read)
[2026-03-30 21:08:31] 2026-03-30 19:07:24,625 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7073837333/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 21:08:31] 2026-03-30 19:07:24,625 | INFO     | extracted standard info from prmon json
[2026-03-30 21:08:31] 2026-03-30 19:07:24,625 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 21:08:31] 2026-03-30 19:07:24,625 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-30 21:08:31] 2026-03-30 19:07:24,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 21:08:31] 2026-03-30 19:07:24,626 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 21:08:31] 2026-03-30 19:07:24,634 | INFO     | fitting pss+swap vs Time
[2026-03-30 21:08:31] 2026-03-30 19:07:24,635 | INFO     | sum of square deviations: 27881125552.0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,642 | INFO     | sum of deviations: 189917378863.5001
[2026-03-30 21:08:31] 2026-03-30 19:07:24,642 | INFO     | mean x: 1774883957.5
[2026-03-30 21:08:31] 2026-03-30 19:07:24,643 | INFO     | mean y: 2482331.136160714
[2026-03-30 21:08:31] 2026-03-30 19:07:24,643 | INFO     | intersect: -12087463907.461658
[2026-03-30 21:08:31] 2026-03-30 19:07:24,643 | INFO     | chi2: 8.04321902739059
[2026-03-30 21:08:31] 2026-03-30 19:07:24,644 | INFO     | sum of square deviations: 26957982662.0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,651 | INFO     | sum of deviations: 217662999777.99997
[2026-03-30 21:08:31] 2026-03-30 19:07:24,652 | INFO     | mean x: 1774883805.0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,652 | INFO     | mean y: 2486869.887133183
[2026-03-30 21:08:31] 2026-03-30 19:07:24,652 | INFO     | intersect: -14328204639.839855
[2026-03-30 21:08:31] 2026-03-30 19:07:24,653 | INFO     | chi2: 7.311577488255035
[2026-03-30 21:08:31] 2026-03-30 19:07:24,653 | INFO     | current chi2=7.311577488255035 (change=9.096377167450038 %)
[2026-03-30 21:08:31] 2026-03-30 19:07:24,653 | INFO     | right removable region: 442
[2026-03-30 21:08:31] 2026-03-30 19:07:24,654 | INFO     | sum of square deviations: 26957982662.0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,660 | INFO     | sum of deviations: 29919218268.000015
[2026-03-30 21:08:31] 2026-03-30 19:07:24,660 | INFO     | mean x: 1774884110.0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,660 | INFO     | mean y: 2508753.083521445
[2026-03-30 21:08:31] 2026-03-30 19:07:24,661 | INFO     | intersect: -1967339872.2125099
[2026-03-30 21:08:31] 2026-03-30 19:07:24,661 | INFO     | chi2: 3.2271246806213747
[2026-03-30 21:08:31] 2026-03-30 19:07:24,661 | INFO     | current chi2=3.2271246806213747 (change=59.87769735435976 %)
[2026-03-30 21:08:31] 2026-03-30 19:07:24,662 | INFO     | sum of square deviations: 26055444809.5
[2026-03-30 21:08:31] 2026-03-30 19:07:24,668 | INFO     | sum of deviations: -74369801971.50002
[2026-03-30 21:08:31] 2026-03-30 19:07:24,668 | INFO     | mean x: 1774884262.5
[2026-03-30 21:08:31] 2026-03-30 19:07:24,668 | INFO     | mean y: 2526339.2260273974
[2026-03-30 21:08:31] 2026-03-30 19:07:24,668 | INFO     | intersect: 5068561177.223862
[2026-03-30 21:08:31] 2026-03-30 19:07:24,669 | INFO     | chi2: 1.0418048080452524
[2026-03-30 21:08:31] 2026-03-30 19:07:24,669 | INFO     | current chi2=1.0418048080452524 (change=67.7172433311546 %)
[2026-03-30 21:08:31] 2026-03-30 19:07:24,670 | INFO     | sum of square deviations: 25173279432.0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,675 | INFO     | sum of deviations: -87062243839.00002
[2026-03-30 21:08:31] 2026-03-30 19:07:24,675 | INFO     | mean x: 1774884415.0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,675 | INFO     | mean y: 2528526.3464203235
[2026-03-30 21:08:31] 2026-03-30 19:07:24,676 | INFO     | intersect: 6140998491.778889
[2026-03-30 21:08:31] 2026-03-30 19:07:24,676 | INFO     | chi2: 0.9931288467297676
[2026-03-30 21:08:31] 2026-03-30 19:07:24,676 | INFO     | current chi2=0.9931288467297676 (change=4.672272669466359 %)
[2026-03-30 21:08:31] 2026-03-30 19:07:24,676 | INFO     | left removable region: 30
[2026-03-30 21:08:31] 2026-03-30 19:07:24,677 | INFO     | sum of square deviations: 21685403803.0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,683 | INFO     | sum of deviations: -14813121019.500027
[2026-03-30 21:08:31] 2026-03-30 19:07:24,683 | INFO     | mean x: 1774884689.5
[2026-03-30 21:08:31] 2026-03-30 19:07:24,683 | INFO     | mean y: 2525891.254854369
[2026-03-30 21:08:31] 2026-03-30 19:07:24,684 | INFO     | intersect: 1214935027.8365767
[2026-03-30 21:08:31] 2026-03-30 19:07:24,684 | INFO     | chi2: 0.12053418673498663
[2026-03-30 21:08:31] 2026-03-30 19:07:24,685 | INFO     | current memory leak: -0.68 B/s (using 412 data points, chi2=0.12)
[2026-03-30 21:08:31] 2026-03-30 19:07:24,686 | INFO     | could have reported an average CPU frequency of 2249 MHz (19 samples)
[2026-03-30 21:08:31] 2026-03-30 19:07:24,686 | INFO     | ..............................
[2026-03-30 21:08:31] 2026-03-30 19:07:24,686 | INFO     | . Timing measurements:
[2026-03-30 21:08:31] 2026-03-30 19:07:24,686 | INFO     | . get job = 0 s
[2026-03-30 21:08:31] 2026-03-30 19:07:24,686 | INFO     | . initial setup = 103 s
[2026-03-30 21:08:31] 2026-03-30 19:07:24,686 | INFO     | . payload setup = 148 s
[2026-03-30 21:08:31] 2026-03-30 19:07:24,686 | INFO     | . stage-in = 0 s
[2026-03-30 21:08:31] 2026-03-30 19:07:24,686 | INFO     | . payload execution = 27421 s
[2026-03-30 21:08:31] 2026-03-30 19:07:24,687 | INFO     | . stage-out = 3 s
[2026-03-30 21:08:31] 2026-03-30 19:07:24,687 | INFO     | . log creation = 1 s
[2026-03-30 21:08:31] 2026-03-30 19:07:24,687 | INFO     | ..............................
[2026-03-30 21:08:31] 2026-03-30 19:07:24,833 | INFO     | 
[2026-03-30 21:08:31] 2026-03-30 19:07:24,834 | INFO     | job summary report
[2026-03-30 21:08:31] 2026-03-30 19:07:24,834 | INFO     | --------------------------------------------------
[2026-03-30 21:08:31] 2026-03-30 19:07:24,834 | INFO     | PanDA job id: 7073837333
[2026-03-30 21:08:31] 2026-03-30 19:07:24,834 | INFO     | task id: 49176710
[2026-03-30 21:08:31] 2026-03-30 19:07:24,834 | INFO     | errors: (none)
[2026-03-30 21:08:31] 2026-03-30 19:07:24,834 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 21:08:31] 2026-03-30 19:07:24,835 | INFO     | pilot state: finished 
[2026-03-30 21:08:31] 2026-03-30 19:07:24,835 | INFO     | transexitcode: 0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,835 | INFO     | exeerrorcode: 0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,835 | INFO     | exeerrordiag: 
[2026-03-30 21:08:31] 2026-03-30 19:07:24,835 | INFO     | exitcode: 0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,835 | INFO     | exitmsg: OK
[2026-03-30 21:08:31] 2026-03-30 19:07:24,835 | INFO     | cpuconsumptiontime: 106857 s
[2026-03-30 21:08:31] 2026-03-30 19:07:24,835 | INFO     | nevents: 400
[2026-03-30 21:08:31] 2026-03-30 19:07:24,835 | INFO     | neventsw: 0
[2026-03-30 21:08:31] 2026-03-30 19:07:24,836 | INFO     | pid: 9018
[2026-03-30 21:08:31] 2026-03-30 19:07:24,836 | INFO     | pgrp: 9018
[2026-03-30 21:08:31] 2026-03-30 19:07:24,836 | INFO     | corecount: 8
[2026-03-30 21:08:31] 2026-03-30 19:07:24,836 | INFO     | event service: False
[2026-03-30 21:08:31] 2026-03-30 19:07:24,836 | INFO     | sizes: {0: 2279815, 1: 2280216, 2: 2280276, 12: 2280304, 27573: 2316846, 27577: 2326030, 27579: 2326168}
[2026-03-30 21:08:31] 2026-03-30 19:07:24,836 | INFO     | --------------------------------------------------
[2026-03-30 21:08:31] 2026-03-30 19:07:24,836 | INFO     | 
[2026-03-30 21:08:31] 2026-03-30 19:07:24,836 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-03-30 21:08:31] 2026-03-30 19:07:25,226 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,226 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,226 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,227 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,228 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,228 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,228 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,228 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,228 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,228 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 21:08:31] 2026-03-30 19:07:25,228 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,228 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 21:08:31] 2026-03-30 19:07:25,228 | INFO     | job 7073837333 has completed (purged errors)
[2026-03-30 21:08:31] 2026-03-30 19:07:25,229 | INFO     | overall cleanup function is called
[2026-03-30 21:08:31] 2026-03-30 19:07:26,237 | INFO     | --- collectZombieJob: --- 10, [9018]
[2026-03-30 21:08:31] 2026-03-30 19:07:26,238 | INFO     | zombie collector waiting for pid 9018
[2026-03-30 21:08:31] 2026-03-30 19:07:26,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 21:08:31] 2026-03-30 19:07:26,238 | INFO     | collected zombie processes
[2026-03-30 21:08:31] 2026-03-30 19:07:26,238 | INFO     | will attempt to kill all subprocesses of pid=9018
[2026-03-30 21:08:31] 2026-03-30 19:07:26,363 | INFO     | process IDs to be killed: [9018] (in reverse order)
[2026-03-30 21:08:31] 2026-03-30 19:07:27,093 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 21:08:31] 2026-03-30 19:07:27,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 21:08:31] 2026-03-30 19:07:27,097 | INFO     | did not find any defunct processes belonging to 9018
[2026-03-30 21:08:31] 2026-03-30 19:07:27,100 | INFO     | did not find any defunct processes belonging to 9018
[2026-03-30 21:08:31] 2026-03-30 19:07:27,100 | INFO     | ready for new job
[2026-03-30 21:08:31] 2026-03-30 19:07:27,100 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-30 21:08:31] 2026-03-30 19:07:27,103 | INFO     | **************************************
[2026-03-30 21:08:31] 2026-03-30 19:07:27,103 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-30 21:08:31] 2026-03-30 19:07:27,103 | INFO     | **************************************
[2026-03-30 21:08:31] 2026-03-30 19:07:27,103 | INFO     | 
[2026-03-30 21:08:31] 2026-03-30 19:07:27,104 | INFO     | pilot is running in a VM
[2026-03-30 21:08:31] 2026-03-30 19:07:27,104 | INFO     | architecture information:
[2026-03-30 21:08:31] 2026-03-30 19:07:27,104 | INFO     | executing command: cat /etc/os-release
[2026-03-30 21:08:31] 2026-03-30 19:07:27,307 | INFO     | cat /etc/os-release:
[2026-03-30 21:08:31] NAME="CentOS Linux"
[2026-03-30 21:08:31] VERSION="7 (Core)"
[2026-03-30 21:08:31] ID="centos"
[2026-03-30 21:08:31] ID_LIKE="rhel fedora"
[2026-03-30 21:08:31] VERSION_ID="7"
[2026-03-30 21:08:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 21:08:31] ANSI_COLOR="0;31"
[2026-03-30 21:08:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 21:08:31] HOME_URL="https://www.centos.org/"
[2026-03-30 21:08:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 21:08:31] 
[2026-03-30 21:08:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 21:08:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 21:08:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 21:08:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 21:08:31] 
[2026-03-30 21:08:31] 2026-03-30 19:07:27,308 | INFO     | **************************************
[2026-03-30 21:08:31] 2026-03-30 19:07:27,811 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-03-30 21:08:31] 2026-03-30 19:07:28,053 | INFO     | sufficient remaining disk space (496917020672 B)
[2026-03-30 21:08:31] 2026-03-30 19:07:28,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 21:08:31] 2026-03-30 19:07:28,054 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 21:08:31] 2026-03-30 19:07:28,054 | INFO     | update_server=False
[2026-03-30 21:08:31] 2026-03-30 19:07:28,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-30 21:08:31] 2026-03-30 19:07:28,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 21:08:31] 2026-03-30 19:07:28,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 21:08:31] 2026-03-30 19:07:28,120 | INFO     | aborting loop
[2026-03-30 21:08:31] 2026-03-30 19:07:28,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 21:08:31] 2026-03-30 19:07:29,008 | INFO     | all payload control threads have been joined
[2026-03-30 21:08:31] 2026-03-30 19:07:29,061 | INFO     | [job] retrieve thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:29,097 | INFO     | all data control threads have been joined
[2026-03-30 21:08:31] 2026-03-30 19:07:29,125 | INFO     | [job] job monitor thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:29,276 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:29,302 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:29,454 | INFO     | all job control threads have been joined
[2026-03-30 21:08:31] 2026-03-30 19:07:29,476 | INFO     | [payload] validate_post thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:29,855 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 21:08:31] 2026-03-30 19:07:30,015 | INFO     | [payload] control thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:30,032 | INFO     | [data] copytool_in thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:30,064 | INFO     | [data] copytool_out thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:30,105 | INFO     | [data] control thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:30,131 | INFO     | [job] validate thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:30,290 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:30,461 | INFO     | [job] control thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:30,632 | INFO     | [payload] failed_post thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:30,863 | INFO     | [job] queue monitor thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:32,650 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:38,790 | INFO     | job.realtimelogging is not enabled
[2026-03-30 21:08:31] 2026-03-30 19:07:39,796 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 21:08:31] 2026-03-30 19:07:56,059 | INFO     | 27696s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-30 21:08:31] 2026-03-30 19:07:57,226 | INFO     | PID=4460 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-30 21:08:31] 2026-03-30 19:07:57,226 | INFO     | .. there are 9 such processes running
[2026-03-30 21:08:31] 2026-03-30 19:07:57,227 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 21:08:31] 2026-03-30 19:07:57,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 21:08:31] 2026-03-30 19:07:57,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 21:08:31] 2026-03-30 19:08:20,464 | INFO     | [monitor] cgroup control has ended
[2026-03-30 21:08:31] 2026-03-30 19:08:22,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571181778752)>', '<ExcThread(monitor, started 140570437605120)>']
[2026-03-30 21:08:31] 2026-03-30 19:08:22,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 21:08:31] 2026-03-30 19:08:22,376 | INFO     | [monitor] control thread has ended
[2026-03-30 21:08:31] 2026-03-30 19:08:27,157 | INFO     | all workflow threads have been joined
[2026-03-30 21:08:31] 2026-03-30 19:08:27,158 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 21:08:31] 2026-03-30 19:08:27,158 | INFO     | traces error code: 0
[2026-03-30 21:08:31] 2026-03-30 19:08:27,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 21:08:31] 2026-03-30 19:08:27,494 [wrapper] ==== pilot stdout END ====
[2026-03-30 21:08:31] 2026-03-30 19:08:27,544 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 21:08:31] 2026-03-30 19:08:27,589 [wrapper] pilotpid: 4460
[2026-03-30 21:08:31] 2026-03-30 19:08:27,656 [wrapper] Pilot exit status: 0
[2026-03-30 21:08:31] 2026-03-30 19:08:28,130 [wrapper] pandaids: 7073837333
[2026-03-30 21:08:31] 2026-03-30 19:08:29,003 [wrapper] cleanup supervisor_pilot  3114 4461
[2026-03-30 21:08:31] 2026-03-30 19:08:29,081 [wrapper] Test setup, not cleaning
[2026-03-30 21:08:31] 2026-03-30 19:08:29,137 [wrapper] apfmon messages muted
[2026-03-30 21:08:31] 2026-03-30 19:08:29,204 [wrapper] ==== wrapper stdout END ====
[2026-03-30 21:08:31] 2026-03-30 19:08:29,235 [wrapper] ==== wrapper stderr END ====
[2026-03-30 21:08:31]  *** Error codes and diagnostics ***
[2026-03-30 21:08:31]     "exeErrorCode": 0,
[2026-03-30 21:08:31]     "exeErrorDiag": "",
[2026-03-30 21:08:31]     "pilotErrorCode": 0,
[2026-03-30 21:08:31]     "pilotErrorDiag": "",
[2026-03-30 21:08:31]  *** Listing of results directory ***
[2026-03-30 21:08:31] total 456300
[2026-03-30 21:08:31] -rwx------. 1 boinc boinc     36322 Mar 30 04:42 runpilot2-wrapper.sh
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc    585013 Mar 30 04:42 pilot3.tar.gz
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc      5118 Mar 30 04:43 queuedata.json
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc       100 Mar 30 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 21:08:31] -rwxr-xr-x. 1 boinc boinc      7986 Mar 30 13:21 run_atlas
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc       105 Mar 30 13:21 job.xml
[2026-03-30 21:08:31] -rw-r--r--. 2 boinc boinc 242169531 Mar 30 13:21 EVNT.49134939._000009.pool.root.1
[2026-03-30 21:08:31] -rw-r--r--. 2 boinc boinc     15845 Mar 30 13:21 start_atlas.sh
[2026-03-30 21:08:31] drwxrwx--x. 2 boinc boinc        68 Mar 30 13:21 shared
[2026-03-30 21:08:31] -rw-r--r--. 2 boinc boinc    597548 Mar 30 13:21 input.tar.gz
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc      6391 Mar 30 13:21 init_data.xml
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc         0 Mar 30 13:21 boinc_lockfile
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc      2609 Mar 30 13:22 pandaJob.out
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc       415 Mar 30 13:27 workernode_map.json
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc   1003985 Mar 30 13:27 agis_schedconf.cvmfs.json
[2026-03-30 21:08:31] drwx------. 5 boinc boinc      4096 Mar 30 13:27 pilot3
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc 212284970 Mar 30 21:05 HITS.49176710._000568.pool.root.1
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc       532 Mar 30 21:06 boinc_task_state.xml
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc      1016 Mar 30 21:07 memory_monitor_summary.json
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc   1511579 Mar 30 21:07 agis_ddmendpoints.agis.ALL.json
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc    628938 Mar 30 21:07 log.49176710._000568.job.log.tgz.1
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc      6315 Mar 30 21:07 heartbeat.json
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc        95 Mar 30 21:07 pilot_heartbeat.json
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc      8192 Mar 30 21:08 boinc_mmap_file
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc        29 Mar 30 21:08 wrapper_checkpoint.txt
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc      5068 Mar 30 21:08 pilotlog.txt
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc   3806351 Mar 30 21:08 log.49176710._000568.job.log.1
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc       357 Mar 30 21:08 output.list
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc       620 Mar 30 21:08 runtime_log
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc   4454400 Mar 30 21:08 result.tar.gz
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc      8832 Mar 30 21:08 runtime_log.err
[2026-03-30 21:08:31] -rw-------. 1 boinc boinc       658 Mar 30 21:08 nCLLDmelHR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmKROKDmGGmDdn.diag
[2026-03-30 21:08:31] -rw-r--r--. 1 boinc boinc     20720 Mar 30 21:08 stderr.txt
[2026-03-30 21:08:32] HITS file was successfully produced:
[2026-03-30 21:08:32] -rw-------. 1 boinc boinc 212284970 Mar 30 21:05 shared/HITS.pool.root.1
[2026-03-30 21:08:32]  *** Contents of shared directory: ***
[2026-03-30 21:08:32] total 448760
[2026-03-30 21:08:32] -rw-r--r--. 2 boinc boinc 242169531 Mar 30 13:21 ATLAS.root_0
[2026-03-30 21:08:32] -rw-r--r--. 2 boinc boinc     15845 Mar 30 13:21 start_atlas.sh
[2026-03-30 21:08:32] -rw-r--r--. 2 boinc boinc    597548 Mar 30 13:21 input.tar.gz
[2026-03-30 21:08:32] -rw-------. 1 boinc boinc 212284970 Mar 30 21:05 HITS.pool.root.1
[2026-03-30 21:08:32] -rw-------. 1 boinc boinc   4454400 Mar 30 21:08 result.tar.gz
21:08:33 (32756): run_atlas exited; CPU time 107280.586738
21:08:33 (32756): called boinc_finish(0)

</stderr_txt>
]]>

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