Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:21:11 (2583563): wrapper (7.7.26015): starting
02:21:11 (2583563): wrapper: running run_atlas (--nthreads 12)
[2026-04-05 02:21:11] Arguments: --nthreads 12
[2026-04-05 02:21:11] Threads: 12
[2026-04-05 02:21:11] Checking for CVMFS
[2026-04-05 02:21:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 02:21:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 02:21:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 02:21:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 02:21:14] 2.13.3.0 1902021 15604 47244 158097 2 49 2835061 4096000 912 130560 0 2990441 99.971 559800 985 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-05 02:21:14] CVMFS is ok
[2026-04-05 02:21:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 02:21:14] Checking for apptainer binary...
[2026-04-05 02:21:14] apptainer is not installed, using version from CVMFS
[2026-04-05 02:21:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 02:21:14] proliant-ml350-g6
[2026-04-05 02:21:14] apptainer works
[2026-04-05 02:21:14] Set ATHENA_PROC_NUMBER=12
[2026-04-05 02:21:14] Set ATHENA_CORE_NUMBER=12
[2026-04-05 02:21:14] Starting ATLAS job with PandaID=7072074811
[2026-04-05 02:21:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 07:43:29]  *** The last 200 lines of the pilot log: ***
[2026-04-05 07:43:29] 2026-04-05 07:42:25,919 | INFO     | preparing for final server update for job 7072074811 in state='finished'
[2026-04-05 07:43:29] 2026-04-05 07:42:25,919 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-7072074811/jobReport.json
[2026-04-05 07:43:29] 2026-04-05 07:42:25,927 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/1/workernode_map.json
[2026-04-05 07:43:29] 2026-04-05 07:42:25,927 | INFO     | this job has now completed (state=finished)
[2026-04-05 07:43:29] 2026-04-05 07:42:25,928 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 07:43:29] 2026-04-05 07:42:25,928 | INFO     | log transfer has been attempted: DONE
[2026-04-05 07:43:29] 2026-04-05 07:42:25,928 | INFO     | job 7072074811 has finished - writing final server update
[2026-04-05 07:43:29] 2026-04-05 07:42:25,928 | INFO     | total number of processed events: 400 (read)
[2026-04-05 07:43:29] 2026-04-05 07:42:25,930 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-7072074811/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 07:43:29] 2026-04-05 07:42:25,936 | INFO     | extracted standard info from prmon json
[2026-04-05 07:43:29] 2026-04-05 07:42:25,936 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 07:43:29] 2026-04-05 07:42:25,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-05 07:43:29] 2026-04-05 07:42:25,937 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 07:43:29] 2026-04-05 07:42:25,938 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 07:43:29] 2026-04-05 07:42:25,956 | INFO     | fitting pss+swap vs Time
[2026-04-05 07:43:29] 2026-04-05 07:42:25,956 | INFO     | sum of square deviations: 9691828230.0
[2026-04-05 07:43:29] 2026-04-05 07:42:25,965 | INFO     | sum of deviations: -20938445871.000015
[2026-04-05 07:43:29] 2026-04-05 07:42:25,965 | INFO     | mean x: 1775365322.0
[2026-04-05 07:43:29] 2026-04-05 07:42:25,965 | INFO     | mean y: 2697023.3777777776
[2026-04-05 07:43:29] 2026-04-05 07:42:25,965 | INFO     | intersect: 3838236594.836682
[2026-04-05 07:43:29] 2026-04-05 07:42:25,966 | INFO     | chi2: 3.226241772342575
[2026-04-05 07:43:29] 2026-04-05 07:42:25,966 | INFO     | sum of square deviations: 9237596457.5
[2026-04-05 07:43:29] 2026-04-05 07:42:25,976 | INFO     | sum of deviations: 1232304188.0000162
[2026-04-05 07:43:29] 2026-04-05 07:42:25,976 | INFO     | mean x: 1775365169.5
[2026-04-05 07:43:29] 2026-04-05 07:42:25,977 | INFO     | mean y: 2704374.193548387
[2026-04-05 07:43:29] 2026-04-05 07:42:25,977 | INFO     | intersect: -234131034.63489673
[2026-04-05 07:43:29] 2026-04-05 07:42:25,977 | INFO     | chi2: 2.5316498941170225
[2026-04-05 07:43:29] 2026-04-05 07:42:25,980 | INFO     | current chi2=2.5316498941170225 (change=21.529442839034637 %)
[2026-04-05 07:43:29] 2026-04-05 07:42:25,981 | INFO     | right removable region: 309
[2026-04-05 07:43:29] 2026-04-05 07:42:25,981 | INFO     | sum of square deviations: 9237596457.5
[2026-04-05 07:43:29] 2026-04-05 07:42:25,987 | INFO     | sum of deviations: -89682893661.5
[2026-04-05 07:43:29] 2026-04-05 07:42:25,987 | INFO     | mean x: 1775365474.5
[2026-04-05 07:43:29] 2026-04-05 07:42:25,987 | INFO     | mean y: 2719992.85483871
[2026-04-05 07:43:29] 2026-04-05 07:42:25,987 | INFO     | intersect: 17238795826.261852
[2026-04-05 07:43:29] 2026-04-05 07:42:25,988 | INFO     | chi2: 1.2785949684447353
[2026-04-05 07:43:29] 2026-04-05 07:42:25,988 | INFO     | current chi2=1.2785949684447353 (change=60.36890417185482 %)
[2026-04-05 07:43:29] 2026-04-05 07:42:25,988 | INFO     | sum of square deviations: 8797783560.0
[2026-04-05 07:43:29] 2026-04-05 07:42:25,994 | INFO     | sum of deviations: -102690743715.00003
[2026-04-05 07:43:29] 2026-04-05 07:42:25,994 | INFO     | mean x: 1775365627.0
[2026-04-05 07:43:29] 2026-04-05 07:42:25,994 | INFO     | mean y: 2724486.8918032786
[2026-04-05 07:43:29] 2026-04-05 07:42:25,994 | INFO     | intersect: 20725400301.69411
[2026-04-05 07:43:29] 2026-04-05 07:42:25,995 | INFO     | chi2: 1.1815220496589562
[2026-04-05 07:43:29] 2026-04-05 07:42:25,995 | INFO     | current chi2=1.1815220496589562 (change=7.592155544289149 %)
[2026-04-05 07:43:29] 2026-04-05 07:42:25,995 | INFO     | left removable region: 20
[2026-04-05 07:43:29] 2026-04-05 07:42:25,998 | INFO     | sum of square deviations: 7484568240.0
[2026-04-05 07:43:29] 2026-04-05 07:42:26,001 | INFO     | sum of deviations: -83572466474.0
[2026-04-05 07:43:29] 2026-04-05 07:42:26,001 | INFO     | mean x: 1775365749.0
[2026-04-05 07:43:29] 2026-04-05 07:42:26,001 | INFO     | mean y: 2734062.1211072663
[2026-04-05 07:43:29] 2026-04-05 07:42:26,001 | INFO     | intersect: 19826415239.13853
[2026-04-05 07:43:29] 2026-04-05 07:42:26,005 | INFO     | chi2: 0.39347103793985927
[2026-04-05 07:43:29] 2026-04-05 07:42:26,005 | INFO     | current memory leak: -11.17 B/s (using 289 data points, chi2=0.39)
[2026-04-05 07:43:29] 2026-04-05 07:42:26,005 | INFO     | could have reported an average CPU frequency of 3491 MHz (14 samples)
[2026-04-05 07:43:29] 2026-04-05 07:42:26,006 | INFO     | ..............................
[2026-04-05 07:43:29] 2026-04-05 07:42:26,006 | INFO     | . Timing measurements:
[2026-04-05 07:43:29] 2026-04-05 07:42:26,006 | INFO     | . get job = 0 s
[2026-04-05 07:43:29] 2026-04-05 07:42:26,006 | INFO     | . initial setup = 12 s
[2026-04-05 07:43:29] 2026-04-05 07:42:26,006 | INFO     | . payload setup = 22 s
[2026-04-05 07:43:29] 2026-04-05 07:42:26,006 | INFO     | . stage-in = 0 s
[2026-04-05 07:43:29] 2026-04-05 07:42:26,006 | INFO     | . payload execution = 19201 s
[2026-04-05 07:43:29] 2026-04-05 07:42:26,006 | INFO     | . stage-out = 2 s
[2026-04-05 07:43:29] 2026-04-05 07:42:26,007 | INFO     | . log creation = 0 s
[2026-04-05 07:43:29] 2026-04-05 07:42:26,007 | INFO     | ..............................
[2026-04-05 07:43:29] 2026-04-05 07:42:26,272 | INFO     | 
[2026-04-05 07:43:29] 2026-04-05 07:42:26,272 | INFO     | job summary report
[2026-04-05 07:43:29] 2026-04-05 07:42:26,272 | INFO     | --------------------------------------------------
[2026-04-05 07:43:29] 2026-04-05 07:42:26,272 | INFO     | PanDA job id: 7072074811
[2026-04-05 07:43:29] 2026-04-05 07:42:26,272 | INFO     | task id: 49263191
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | errors: (none)
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | pilot state: finished 
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | transexitcode: 0
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | exeerrorcode: 0
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | exeerrordiag: 
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | exitcode: 0
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | exitmsg: OK
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | cpuconsumptiontime: 63508 s
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | nevents: 400
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | neventsw: 0
[2026-04-05 07:43:29] 2026-04-05 07:42:26,273 | INFO     | pid: 2632299
[2026-04-05 07:43:29] 2026-04-05 07:42:26,274 | INFO     | pgrp: 2632299
[2026-04-05 07:43:29] 2026-04-05 07:42:26,274 | INFO     | corecount: 12
[2026-04-05 07:43:29] 2026-04-05 07:42:26,274 | INFO     | event service: False
[2026-04-05 07:43:29] 2026-04-05 07:42:26,274 | INFO     | sizes: {0: 2279838, 1: 2280299, 2: 2280299, 19227: 2313226, 19228: 2313225, 19231: 2322325, 19232: 2322509, 19233: 2322703}
[2026-04-05 07:43:29] 2026-04-05 07:42:26,274 | INFO     | --------------------------------------------------
[2026-04-05 07:43:29] 2026-04-05 07:42:26,274 | INFO     | 
[2026-04-05 07:43:29] 2026-04-05 07:42:26,274 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-04-05 07:43:29] 2026-04-05 07:42:26,319 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,319 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,319 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,319 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,321 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 07:43:29] 2026-04-05 07:42:26,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,321 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 07:43:29] 2026-04-05 07:42:26,321 | INFO     | job 7072074811 has completed (purged errors)
[2026-04-05 07:43:29] 2026-04-05 07:42:26,327 | INFO     | overall cleanup function is called
[2026-04-05 07:43:29] 2026-04-05 07:42:27,341 | INFO     | --- collectZombieJob: --- 10, [2632299]
[2026-04-05 07:43:29] 2026-04-05 07:42:27,342 | INFO     | zombie collector waiting for pid 2632299
[2026-04-05 07:43:29] 2026-04-05 07:42:27,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 07:43:29] 2026-04-05 07:42:27,342 | INFO     | collected zombie processes
[2026-04-05 07:43:29] 2026-04-05 07:42:27,342 | INFO     | will attempt to kill all subprocesses of pid=2632299
[2026-04-05 07:43:29] 2026-04-05 07:42:27,559 | INFO     | process IDs to be killed: [2632299] (in reverse order)
[2026-04-05 07:43:29] 2026-04-05 07:42:27,648 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 07:43:29] 2026-04-05 07:42:27,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 07:43:29] 2026-04-05 07:42:27,654 | INFO     | did not find any defunct processes belonging to 2632299
[2026-04-05 07:43:29] 2026-04-05 07:42:27,661 | INFO     | did not find any defunct processes belonging to 2632299
[2026-04-05 07:43:29] 2026-04-05 07:42:27,661 | INFO     | ready for new job
[2026-04-05 07:43:29] 2026-04-05 07:42:27,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-05 07:43:29] 2026-04-05 07:42:27,667 | INFO     | **************************************
[2026-04-05 07:43:29] 2026-04-05 07:42:27,667 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-05 07:43:29] 2026-04-05 07:42:27,667 | INFO     | **************************************
[2026-04-05 07:43:29] 2026-04-05 07:42:27,670 | INFO     | 
[2026-04-05 07:43:29] 2026-04-05 07:42:27,670 | INFO     | architecture information:
[2026-04-05 07:43:29] 2026-04-05 07:42:27,671 | INFO     | executing command: cat /etc/os-release
[2026-04-05 07:43:29] 2026-04-05 07:42:27,695 | INFO     | cat /etc/os-release:
[2026-04-05 07:43:29] NAME="CentOS Linux"
[2026-04-05 07:43:29] VERSION="7 (Core)"
[2026-04-05 07:43:29] ID="centos"
[2026-04-05 07:43:29] ID_LIKE="rhel fedora"
[2026-04-05 07:43:29] VERSION_ID="7"
[2026-04-05 07:43:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 07:43:29] ANSI_COLOR="0;31"
[2026-04-05 07:43:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 07:43:29] HOME_URL="https://www.centos.org/"
[2026-04-05 07:43:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 07:43:29] 
[2026-04-05 07:43:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 07:43:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 07:43:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 07:43:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 07:43:29] 
[2026-04-05 07:43:29] 2026-04-05 07:42:27,695 | INFO     | **************************************
[2026-04-05 07:43:29] 2026-04-05 07:42:28,204 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-04-05 07:43:29] 2026-04-05 07:42:28,239 | INFO     | sufficient remaining disk space (106823680000 B)
[2026-04-05 07:43:29] 2026-04-05 07:42:28,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 07:43:29] 2026-04-05 07:42:28,240 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 07:43:29] 2026-04-05 07:42:28,240 | INFO     | update_server=False
[2026-04-05 07:43:29] 2026-04-05 07:42:28,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-05 07:43:29] 2026-04-05 07:42:28,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 07:43:29] 2026-04-05 07:42:28,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 07:43:29] 2026-04-05 07:42:28,288 | INFO     | all payload control threads have been joined
[2026-04-05 07:43:29] 2026-04-05 07:42:28,300 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-05 07:43:29] 2026-04-05 07:42:28,301 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-05 07:43:29] 2026-04-05 07:42:28,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 07:43:29] 2026-04-05 07:42:28,301 | INFO     | will abort loop
[2026-04-05 07:43:29] 2026-04-05 07:42:28,600 | INFO     | all data control threads have been joined
[2026-04-05 07:43:29] 2026-04-05 07:42:29,249 | INFO     | [job] retrieve thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:29,249 | INFO     | [job] queue monitor thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:29,249 | INFO     | [job] validate thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:29,294 | INFO     | [payload] control thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:29,309 | INFO     | [job] job monitor thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:29,367 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:29,606 | INFO     | [data] control thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:29,652 | INFO     | all job control threads have been joined
[2026-04-05 07:43:29] 2026-04-05 07:42:29,726 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:30,020 | INFO     | [payload] failed_post thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:30,123 | INFO     | [payload] validate_post thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:30,175 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:30,246 | INFO     | [data] copytool_out thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:30,303 | INFO     | [data] copytool_in thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:30,433 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:30,657 | INFO     | [job] control thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:31,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 07:43:29] 2026-04-05 07:42:35,568 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 07:43:29] 2026-04-05 07:42:56,950 | INFO     | 19248s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-04-05 07:43:29] 2026-04-05 07:42:58,190 | INFO     | PID=2603017 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 07:43:29] 2026-04-05 07:42:58,190 | INFO     | .. there are 2 such processes running
[2026-04-05 07:43:29] 2026-04-05 07:42:58,190 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 07:43:29] 2026-04-05 07:42:58,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 07:43:29] 2026-04-05 07:42:58,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 07:43:29] 2026-04-05 07:43:22,272 | INFO     | [monitor] cgroup control has ended
[2026-04-05 07:43:29] 2026-04-05 07:43:23,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128041994786624)>', '<ExcThread(monitor, started 128041221089024)>']
[2026-04-05 07:43:29] 2026-04-05 07:43:24,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 07:43:29] 2026-04-05 07:43:24,330 | INFO     | [monitor] control thread has ended
[2026-04-05 07:43:29] 2026-04-05 07:43:28,592 | INFO     | all workflow threads have been joined
[2026-04-05 07:43:29] 2026-04-05 07:43:28,593 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 07:43:29] 2026-04-05 07:43:28,593 | INFO     | traces error code: 0
[2026-04-05 07:43:29] 2026-04-05 07:43:28,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 07:43:29] 2026-04-05 07:43:28,899 [wrapper] ==== pilot stdout END ====
[2026-04-05 07:43:29] 2026-04-05 07:43:28,907 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 07:43:29] 2026-04-05 07:43:28,915 [wrapper] pilotpid: 2603017
[2026-04-05 07:43:29] 2026-04-05 07:43:28,922 [wrapper] Pilot exit status: 0
[2026-04-05 07:43:29] 2026-04-05 07:43:28,947 [wrapper] pandaids: 7072074811
[2026-04-05 07:43:29] 2026-04-05 07:43:29,011 [wrapper] cleanup supervisor_pilot 2892644 2603018
[2026-04-05 07:43:29] 2026-04-05 07:43:29,023 [wrapper] Test setup, not cleaning
[2026-04-05 07:43:29] 2026-04-05 07:43:29,029 [wrapper] apfmon messages muted
[2026-04-05 07:43:29] 2026-04-05 07:43:29,036 [wrapper] ==== wrapper stdout END ====
[2026-04-05 07:43:29] 2026-04-05 07:43:29,041 [wrapper] ==== wrapper stderr END ====
[2026-04-05 07:43:29]  *** Error codes and diagnostics ***
[2026-04-05 07:43:29]     "exeErrorCode": 0,
[2026-04-05 07:43:29]     "exeErrorDiag": "",
[2026-04-05 07:43:29]     "pilotErrorCode": 0,
[2026-04-05 07:43:29]     "pilotErrorDiag": "",
[2026-04-05 07:43:29]  *** Listing of results directory ***
[2026-04-05 07:43:29] total 422916
[2026-04-05 07:43:29] -rw-r--r-- 1 boinc boinc    585013 M&#195;&#164;r 30 01:12 pilot3.tar.gz
[2026-04-05 07:43:29] -rw-r--r-- 1 boinc boinc      5118 M&#195;&#164;r 30 01:15 queuedata.json
[2026-04-05 07:43:29] -rwx------ 1 boinc boinc     36322 M&#195;&#164;r 30 01:15 runpilot2-wrapper.sh
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc       100 Apr  5 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 07:43:29] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 02:21 run_atlas
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc       105 Apr  5 02:21 job.xml
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc      9312 Apr  5 02:21 init_data.xml
[2026-04-05 07:43:29] -rw-r--r-- 2 boinc boinc 225133982 Apr  5 02:21 EVNT.49263189._000354.pool.root.1
[2026-04-05 07:43:29] -rw-r--r-- 2 boinc boinc    597537 Apr  5 02:21 input.tar.gz
[2026-04-05 07:43:29] -rw-r--r-- 2 boinc boinc     15845 Apr  5 02:21 start_atlas.sh
[2026-04-05 07:43:29] drwxrwx--x 2 boinc boinc      4096 Apr  5 02:21 shared
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc         0 Apr  5 02:21 boinc_lockfile
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc      2574 Apr  5 02:21 pandaJob.out
[2026-04-05 07:43:29] -rw------- 1 boinc boinc   1005104 Apr  5 02:21 agis_schedconf.cvmfs.json
[2026-04-05 07:43:29] -rw------- 1 boinc boinc       429 Apr  5 02:21 workernode_map.json
[2026-04-05 07:43:29] drwx------ 5 boinc boinc      4096 Apr  5 02:21 pilot3
[2026-04-05 07:43:29] -rw------- 1 boinc boinc 197348594 Apr  5 07:41 HITS.49263191._004203.pool.root.1
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc       530 Apr  5 07:41 boinc_task_state.xml
[2026-04-05 07:43:29] -rw------- 1 boinc boinc        95 Apr  5 07:42 pilot_heartbeat.json
[2026-04-05 07:43:29] -rw------- 1 boinc boinc      1023 Apr  5 07:42 memory_monitor_summary.json
[2026-04-05 07:43:29] -rw------- 1 boinc boinc   1511579 Apr  5 07:42 agis_ddmendpoints.agis.ALL.json
[2026-04-05 07:43:29] -rw------- 1 boinc boinc    576499 Apr  5 07:42 log.49263191._004203.job.log.tgz.1
[2026-04-05 07:43:29] -rw------- 1 boinc boinc      6340 Apr  5 07:42 heartbeat.json
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc        28 Apr  5 07:43 wrapper_checkpoint.txt
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc      8192 Apr  5 07:43 boinc_mmap_file
[2026-04-05 07:43:29] -rw------- 1 boinc boinc      5145 Apr  5 07:43 pilotlog.txt
[2026-04-05 07:43:29] -rw------- 1 boinc boinc   2745177 Apr  5 07:43 log.49263191._004203.job.log.1
[2026-04-05 07:43:29] -rw------- 1 boinc boinc       357 Apr  5 07:43 output.list
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc       620 Apr  5 07:43 runtime_log
[2026-04-05 07:43:29] -rw------- 1 boinc boinc   3338240 Apr  5 07:43 result.tar.gz
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc      9212 Apr  5 07:43 runtime_log.err
[2026-04-05 07:43:29] -rw------- 1 boinc boinc       664 Apr  5 07:43 jCQNDmKPGR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmgHMKDmzBFy7n.diag
[2026-04-05 07:43:29] -rw-rw-r-- 1 boinc boinc     21169 Apr  5 07:43 stderr.txt
[2026-04-05 07:43:29] HITS file was successfully produced:
[2026-04-05 07:43:29] -rw------- 1 boinc boinc 197348594 Apr  5 07:41 shared/HITS.pool.root.1
[2026-04-05 07:43:29]  *** Contents of shared directory: ***
[2026-04-05 07:43:29] total 416452
[2026-04-05 07:43:29] -rw-r--r-- 2 boinc boinc 225133982 Apr  5 02:21 ATLAS.root_0
[2026-04-05 07:43:29] -rw-r--r-- 2 boinc boinc    597537 Apr  5 02:21 input.tar.gz
[2026-04-05 07:43:29] -rw-r--r-- 2 boinc boinc     15845 Apr  5 02:21 start_atlas.sh
[2026-04-05 07:43:29] -rw------- 1 boinc boinc 197348594 Apr  5 07:41 HITS.pool.root.1
[2026-04-05 07:43:29] -rw------- 1 boinc boinc   3338240 Apr  5 07:43 result.tar.gz
07:43:30 (2583563): run_atlas exited; CPU time 63656.380417
07:43:30 (2583563): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN