Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:05:18 (901509): wrapper (7.7.26015): starting
22:05:18 (901509): wrapper: running run_atlas (--nthreads 4)
[2026-04-03 22:05:18] Arguments: --nthreads 4
[2026-04-03 22:05:18] Threads: 4
[2026-04-03 22:05:18] Checking for CVMFS
[2026-04-03 22:05:18] No cvmfs_config command found, will try listing directly
[2026-04-03 22:05:18] CVMFS is ok
[2026-04-03 22:05:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 22:05:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 22:05:18] Further information can be found at the LHC@home message board.
[2026-04-03 22:05:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 22:05:18] Checking for apptainer binary...
[2026-04-03 22:05:18] which: no apptainer in ((null))
[2026-04-03 22:05:18] apptainer is not installed, using version from CVMFS
[2026-04-03 22:05:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 22:05:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/13/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-04-03 22:05:18] apptainer works
[2026-04-03 22:05:18] Set ATHENA_PROC_NUMBER=4
[2026-04-03 22:05:18] Set ATHENA_CORE_NUMBER=4
[2026-04-03 22:05:18] Starting ATLAS job with PandaID=7069744266
[2026-04-03 22:05:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 23:46:42]  *** The last 200 lines of the pilot log: ***
[2026-04-03 23:46:42]  lfn=log.49263200._003324.job.log.tgz.1
[2026-04-03 23:46:42]  mtime=0
[2026-04-03 23:46:42]  protocol_id=None
[2026-04-03 23:46:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-03 23:46:42]  replicas=None
[2026-04-03 23:46:42]  scope=mc23_13p6TeV
[2026-04-03 23:46:42]  status=None
[2026-04-03 23:46:42]  status_code=0
[2026-04-03 23:46:42]  storage_token=
[2026-04-03 23:46:42]  surl=/var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7069744266/log.49263200._003324.job.log.tgz.1
[2026-04-03 23:46:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/fd/log.49263200._003324.job.log.tgz.1
[2026-04-03 23:46:42]  workdir=None
[2026-04-03 23:46:42] ]
[2026-04-03 23:46:42] 2026-04-03 21:45:57,330 | INFO     | transferring file log.49263200._003324.job.log.tgz.1 from /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7069744266/log.49263200._003324.job.log.tgz.1 to /var/lib/
[2026-04-03 23:46:42] 2026-04-03 21:45:57,330 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7069744266/log.49263200._003324.job.log.tgz.1 /var/lib/boinc/var/slot20/slots/13/
[2026-04-03 23:46:42] 2026-04-03 21:45:57,343 | INFO     | adding to output.list: log.49263200._003324.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/fd/log.49263200._003324.job.log.tg
[2026-04-03 23:46:42] 2026-04-03 21:45:57,343 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-03 23:46:42] 2026-04-03 21:45:57,343 | INFO     | summary of transferred files:
[2026-04-03 23:46:42] 2026-04-03 21:45:57,343 | INFO     |  -- lfn=log.49263200._003324.job.log.tgz.1, status_code=0, status=transferred
[2026-04-03 23:46:42] 2026-04-03 21:45:57,344 | INFO     | stage-out finished correctly
[2026-04-03 23:46:42] 2026-04-03 21:45:58,384 | INFO     | time since job start (6029s) is within the limit (345600.0s)
[2026-04-03 23:46:42] 2026-04-03 21:45:58,878 | WARNING  | process 910431 can no longer be monitored (due to stat problems) - aborting
[2026-04-03 23:46:42] 2026-04-03 21:45:58,878 | INFO     | using path: /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7069744266/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 23:46:42] 2026-04-03 21:45:59,022 | INFO     | number of running child processes to parent process 910431: 1
[2026-04-03 23:46:42] 2026-04-03 21:45:59,022 | INFO     | maximum number of monitored processes: 6
[2026-04-03 23:46:42] 2026-04-03 21:46:00,389 | INFO     | time since job start (6031s) is within the limit (345600.0s)
[2026-04-03 23:46:42] 2026-04-03 21:46:00,821 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-03 23:46:42] 2026-04-03 21:46:01,525 | INFO     | monitor loop #457: job 0:7069744266 is in state 'finished'
[2026-04-03 23:46:42] 2026-04-03 21:46:01,526 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-03 23:46:42] 2026-04-03 21:46:02,394 | INFO     | time since job start (6033s) is within the limit (345600.0s)
[2026-04-03 23:46:42] 2026-04-03 21:46:03,721 | INFO     | job 7069744266 has state=finished
[2026-04-03 23:46:42] 2026-04-03 21:46:03,721 | INFO     | preparing for final server update for job 7069744266 in state='finished'
[2026-04-03 23:46:42] 2026-04-03 21:46:03,721 | INFO     | reading metadata from: /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7069744266/jobReport.json
[2026-04-03 23:46:42] 2026-04-03 21:46:03,723 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot20/slots/13/workernode_map.json
[2026-04-03 23:46:42] 2026-04-03 21:46:03,723 | INFO     | this job has now completed (state=finished)
[2026-04-03 23:46:42] 2026-04-03 21:46:03,723 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-03 23:46:42] 2026-04-03 21:46:03,723 | INFO     | log transfer has been attempted: DONE
[2026-04-03 23:46:42] 2026-04-03 21:46:03,723 | INFO     | job 7069744266 has finished - writing final server update
[2026-04-03 23:46:42] 2026-04-03 21:46:03,724 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_338603/.job.ad'
[2026-04-03 23:46:42] 2026-04-03 21:46:03,724 | INFO     | total number of processed events: 400 (read)
[2026-04-03 23:46:42] 2026-04-03 21:46:03,729 | INFO     | using path: /var/lib/boinc/var/slot20/slots/13/PanDA_Pilot-7069744266/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 23:46:42] 2026-04-03 21:46:03,730 | INFO     | extracted standard info from prmon json
[2026-04-03 23:46:42] 2026-04-03 21:46:03,730 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 23:46:42] 2026-04-03 21:46:03,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-03 23:46:42] 2026-04-03 21:46:03,730 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 23:46:42] 2026-04-03 21:46:03,730 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 23:46:42] 2026-04-03 21:46:03,731 | INFO     | fitting pss+swap vs Time
[2026-04-03 23:46:42] 2026-04-03 21:46:03,731 | INFO     | sum of square deviations: 241429643.0
[2026-04-03 23:46:42] 2026-04-03 21:46:03,731 | INFO     | sum of deviations: -6446955373.0
[2026-04-03 23:46:42] 2026-04-03 21:46:03,731 | INFO     | mean x: 1775249829.5
[2026-04-03 23:46:42] 2026-04-03 21:46:03,731 | INFO     | mean y: 2412248.5434782607
[2026-04-03 23:46:42] 2026-04-03 21:46:03,731 | INFO     | intersect: 47407346806.278625
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | chi2: 0.13458060922534157
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | current memory leak: -26.70 B/s (using 92 data points, chi2=0.13)
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | could have reported an average CPU frequency of 2954 MHz (7 samples)
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | ..............................
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | . Timing measurements:
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | . get job = 0 s
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | . initial setup = 3 s
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | . payload setup = 5 s
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | . stage-in = 0 s
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | . payload execution = 6007 s
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | . stage-out = 0 s
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | . log creation = 0 s
[2026-04-03 23:46:42] 2026-04-03 21:46:03,732 | INFO     | ..............................
[2026-04-03 23:46:42] 2026-04-03 21:46:04,186 | INFO     | 
[2026-04-03 23:46:42] 2026-04-03 21:46:04,187 | INFO     | job summary report
[2026-04-03 23:46:42] 2026-04-03 21:46:04,187 | INFO     | --------------------------------------------------
[2026-04-03 23:46:42] 2026-04-03 21:46:04,187 | INFO     | PanDA job id: 7069744266
[2026-04-03 23:46:42] 2026-04-03 21:46:04,187 | INFO     | task id: 49263200
[2026-04-03 23:46:42] 2026-04-03 21:46:04,187 | INFO     | errors: (none)
[2026-04-03 23:46:42] 2026-04-03 21:46:04,187 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 23:46:42] 2026-04-03 21:46:04,187 | INFO     | pilot state: finished 
[2026-04-03 23:46:42] 2026-04-03 21:46:04,187 | INFO     | transexitcode: 0
[2026-04-03 23:46:42] 2026-04-03 21:46:04,187 | INFO     | exeerrorcode: 0
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | exeerrordiag: 
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | exitcode: 0
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | exitmsg: OK
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | cpuconsumptiontime: 23169 s
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | nevents: 400
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | neventsw: 0
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | pid: 910431
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | pgrp: 910431
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | corecount: 4
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | event service: False
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | sizes: {0: 2280260, 11: 2280260, 6016: 2307176, 6017: 2316198, 6021: 2316254, 6024: 2316448}
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | --------------------------------------------------
[2026-04-03 23:46:42] 2026-04-03 21:46:04,188 | INFO     | 
[2026-04-03 23:46:42] 2026-04-03 21:46:04,189 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/13
[2026-04-03 23:46:42] 2026-04-03 21:46:04,205 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,206 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 23:46:42] 2026-04-03 21:46:04,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,207 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 23:46:42] 2026-04-03 21:46:04,207 | INFO     | job 7069744266 has completed (purged errors)
[2026-04-03 23:46:42] 2026-04-03 21:46:04,207 | INFO     | overall cleanup function is called
[2026-04-03 23:46:42] 2026-04-03 21:46:05,214 | INFO     | --- collectZombieJob: --- 10, [910431]
[2026-04-03 23:46:42] 2026-04-03 21:46:05,214 | INFO     | zombie collector waiting for pid 910431
[2026-04-03 23:46:42] 2026-04-03 21:46:05,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 23:46:42] 2026-04-03 21:46:05,214 | INFO     | collected zombie processes
[2026-04-03 23:46:42] 2026-04-03 21:46:05,214 | INFO     | will attempt to kill all subprocesses of pid=910431
[2026-04-03 23:46:42] 2026-04-03 21:46:05,362 | INFO     | process IDs to be killed: [910431] (in reverse order)
[2026-04-03 23:46:42] 2026-04-03 21:46:05,420 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 23:46:42] 2026-04-03 21:46:05,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 23:46:42] 2026-04-03 21:46:05,429 | INFO     | did not find any defunct processes belonging to 910431
[2026-04-03 23:46:42] 2026-04-03 21:46:05,436 | INFO     | did not find any defunct processes belonging to 910431
[2026-04-03 23:46:42] 2026-04-03 21:46:05,436 | INFO     | ready for new job
[2026-04-03 23:46:42] 2026-04-03 21:46:05,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 23:46:42] 2026-04-03 21:46:05,438 | INFO     | **************************************
[2026-04-03 23:46:42] 2026-04-03 21:46:05,438 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 23:46:42] 2026-04-03 21:46:05,438 | INFO     | **************************************
[2026-04-03 23:46:42] 2026-04-03 21:46:05,438 | INFO     | 
[2026-04-03 23:46:42] 2026-04-03 21:46:05,441 | INFO     | architecture information:
[2026-04-03 23:46:42] 2026-04-03 21:46:05,442 | INFO     | executing command: cat /etc/os-release
[2026-04-03 23:46:42] 2026-04-03 21:46:05,454 | INFO     | cat /etc/os-release:
[2026-04-03 23:46:42] NAME="CentOS Linux"
[2026-04-03 23:46:42] VERSION="7 (Core)"
[2026-04-03 23:46:42] ID="centos"
[2026-04-03 23:46:42] ID_LIKE="rhel fedora"
[2026-04-03 23:46:42] VERSION_ID="7"
[2026-04-03 23:46:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 23:46:42] ANSI_COLOR="0;31"
[2026-04-03 23:46:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 23:46:42] HOME_URL="https://www.centos.org/"
[2026-04-03 23:46:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 23:46:42] 
[2026-04-03 23:46:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 23:46:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 23:46:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 23:46:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 23:46:42] 
[2026-04-03 23:46:42] 2026-04-03 21:46:05,455 | INFO     | **************************************
[2026-04-03 23:46:42] 2026-04-03 21:46:05,958 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/13
[2026-04-03 23:46:42] 2026-04-03 21:46:05,971 | INFO     | sufficient remaining disk space (70482132992 B)
[2026-04-03 23:46:42] 2026-04-03 21:46:05,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 23:46:42] 2026-04-03 21:46:05,972 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 23:46:42] 2026-04-03 21:46:05,972 | INFO     | update_server=False
[2026-04-03 23:46:42] 2026-04-03 21:46:05,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 23:46:42] 2026-04-03 21:46:05,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 23:46:42] 2026-04-03 21:46:05,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 23:46:42] 2026-04-03 21:46:05,972 | INFO     | aborting loop
[2026-04-03 23:46:42] 2026-04-03 21:46:06,169 | INFO     | all job control threads have been joined
[2026-04-03 23:46:42] 2026-04-03 21:46:06,405 | INFO     | all payload control threads have been joined
[2026-04-03 23:46:42] 2026-04-03 21:46:06,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 23:46:42] 2026-04-03 21:46:06,977 | INFO     | [job] retrieve thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:06,978 | INFO     | [job] job monitor thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:06,996 | INFO     | [payload] validate_post thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:07,032 | INFO     | all data control threads have been joined
[2026-04-03 23:46:42] 2026-04-03 21:46:07,175 | INFO     | [job] control thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:07,277 | INFO     | [payload] failed_post thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:07,411 | INFO     | [payload] control thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:07,861 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:07,978 | INFO     | [data] copytool_out thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:07,991 | INFO     | [job] validate thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:08,038 | INFO     | [data] control thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:08,175 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:08,199 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:08,257 | INFO     | [data] copytool_in thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:08,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 23:46:42] 2026-04-03 21:46:09,790 | INFO     | [job] queue monitor thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:10,876 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:16,831 | INFO     | job.realtimelogging is not enabled
[2026-04-03 23:46:42] 2026-04-03 21:46:17,837 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 23:46:42] 2026-04-03 21:46:35,680 | INFO     | PID=905636 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-03 23:46:42] 2026-04-03 21:46:35,681 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 23:46:42] 2026-04-03 21:46:35,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 23:46:42] 2026-04-03 21:46:35,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 23:46:42] 2026-04-03 21:46:36,578 | INFO     | [monitor] cgroup control has ended
[2026-04-03 23:46:42] 2026-04-03 21:46:37,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23424924399424)>', '<ExcThread(monitor, started 23424606906112)>']
[2026-04-03 23:46:42] 2026-04-03 21:46:37,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 23:46:42] 2026-04-03 21:46:37,691 | INFO     | [monitor] control thread has ended
[2026-04-03 23:46:42] 2026-04-03 21:46:42,076 | INFO     | all workflow threads have been joined
[2026-04-03 23:46:42] 2026-04-03 21:46:42,076 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 23:46:42] 2026-04-03 21:46:42,076 | INFO     | traces error code: 0
[2026-04-03 23:46:42] 2026-04-03 21:46:42,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 23:46:42] 2026-04-03 21:46:42,153 [wrapper] ==== pilot stdout END ====
[2026-04-03 23:46:42] 2026-04-03 21:46:42,155 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 23:46:42] 2026-04-03 21:46:42,157 [wrapper] pilotpid: 905636
[2026-04-03 23:46:42] 2026-04-03 21:46:42,158 [wrapper] Pilot exit status: 0
[2026-04-03 23:46:42] 2026-04-03 21:46:42,165 [wrapper] pandaids: 7069744266
[2026-04-03 23:46:42] 2026-04-03 21:46:42,206 [wrapper] cleanup supervisor_pilot  966196 905637
[2026-04-03 23:46:42] 2026-04-03 21:46:42,208 [wrapper] Test setup, not cleaning
[2026-04-03 23:46:42] 2026-04-03 21:46:42,209 [wrapper] apfmon messages muted
[2026-04-03 23:46:42] 2026-04-03 21:46:42,211 [wrapper] ==== wrapper stdout END ====
[2026-04-03 23:46:42] 2026-04-03 21:46:42,213 [wrapper] ==== wrapper stderr END ====
[2026-04-03 23:46:42]  *** Error codes and diagnostics ***
[2026-04-03 23:46:42]     "exeErrorCode": 0,
[2026-04-03 23:46:42]     "exeErrorDiag": "",
[2026-04-03 23:46:42]     "pilotErrorCode": 0,
[2026-04-03 23:46:42]     "pilotErrorDiag": "",
[2026-04-03 23:46:42]  *** Listing of results directory ***
[2026-04-03 23:46:42] total 417988
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc    585013 Mar 29 20:14 pilot3.tar.gz
[2026-04-03 23:46:42] -rwx------. 1 boinc boinc     36322 Mar 29 20:17 runpilot2-wrapper.sh
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc      5118 Mar 29 20:19 queuedata.json
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc       100 Apr  3 22:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 23:46:42] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 22:05 run_atlas
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc       105 Apr  3 22:05 job.xml
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc      6563 Apr  3 22:05 init_data.xml
[2026-04-03 23:46:42] -rw-r--r--. 2 boinc boinc 223631908 Apr  3 22:05 EVNT.49263198._000133.pool.root.1
[2026-04-03 23:46:42] -rw-r--r--. 2 boinc boinc     15845 Apr  3 22:05 start_atlas.sh
[2026-04-03 23:46:42] drwxrwx--x. 2 boinc boinc      4096 Apr  3 22:05 shared
[2026-04-03 23:46:42] -rw-r--r--. 2 boinc boinc    597539 Apr  3 22:05 input.tar.gz
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc         0 Apr  3 22:05 boinc_lockfile
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc      2573 Apr  3 22:05 pandaJob.out
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc   1005173 Apr  3 22:05 agis_schedconf.cvmfs.json
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc   1511579 Apr  3 22:05 agis_ddmendpoints.agis.ALL.json
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc       447 Apr  3 22:05 workernode_map.json
[2026-04-03 23:46:42] drwx------. 5 boinc boinc      4096 Apr  3 22:05 pilot3
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc 198117780 Apr  3 23:45 HITS.49263200._003324.pool.root.1
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc       529 Apr  3 23:45 boinc_task_state.xml
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc        95 Apr  3 23:45 pilot_heartbeat.json
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc      1033 Apr  3 23:45 memory_monitor_summary.json
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc    298917 Apr  3 23:45 log.49263200._003324.job.log.tgz.1
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc      6396 Apr  3 23:46 heartbeat.json
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc      8192 Apr  3 23:46 boinc_mmap_file
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc        27 Apr  3 23:46 wrapper_checkpoint.txt
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc      4825 Apr  3 23:46 pilotlog.txt
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc    872233 Apr  3 23:46 log.49263200._003324.job.log.1
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc       357 Apr  3 23:46 output.list
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc       620 Apr  3 23:46 runtime_log
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc   1187840 Apr  3 23:46 result.tar.gz
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc      9221 Apr  3 23:46 runtime_log.err
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc       662 Apr  3 23:46 Mr6NDmls9Q9n9Rq4apOajLDm4fhM0noT9bVoINGKDm0YNKDmHSsnMn.diag
[2026-04-03 23:46:42] -rw-r--r--. 1 boinc boinc     21556 Apr  3 23:46 stderr.txt
[2026-04-03 23:46:42] HITS file was successfully produced:
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc 198117780 Apr  3 23:45 shared/HITS.pool.root.1
[2026-04-03 23:46:42]  *** Contents of shared directory: ***
[2026-04-03 23:46:42] total 413632
[2026-04-03 23:46:42] -rw-r--r--. 2 boinc boinc 223631908 Apr  3 22:05 ATLAS.root_0
[2026-04-03 23:46:42] -rw-r--r--. 2 boinc boinc     15845 Apr  3 22:05 start_atlas.sh
[2026-04-03 23:46:42] -rw-r--r--. 2 boinc boinc    597539 Apr  3 22:05 input.tar.gz
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc 198117780 Apr  3 23:45 HITS.pool.root.1
[2026-04-03 23:46:42] -rw-------. 1 boinc boinc   1187840 Apr  3 23:46 result.tar.gz
23:46:43 (901509): run_atlas exited; CPU time 23251.169456
23:46:43 (901509): called boinc_finish(0)

</stderr_txt>
]]>

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