Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:28:47 (15518): wrapper (7.7.26015): starting
18:28:47 (15518): wrapper: running run_atlas (--nthreads 12)
[2026-03-29 18:28:47] Arguments: --nthreads 12
[2026-03-29 18:28:47] Threads: 12
[2026-03-29 18:28:47] Checking for CVMFS
[2026-03-29 18:28:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 18:28:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 18:28:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 18:28:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 18:28:48] 2.11.2.0 2984 465356 90768 157859 2 49 15798550 20275201 1 130560 1 198790850 99.960 25578394 16899 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-29 18:28:48] CVMFS is ok
[2026-03-29 18:28:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 18:28:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-29 18:28:48] Further information can be found at the LHC@home message board.
[2026-03-29 18:28:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 18:28:48] Checking for apptainer binary...
[2026-03-29 18:28:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-29 18:28:48] Running /usr/bin/apptainer --version
[2026-03-29 18:28:48] apptainer version 1.3.2-1.el7
[2026-03-29 18:28:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 18:28:48] c-205-26.aglt2.org
[2026-03-29 18:28:48] apptainer works
[2026-03-29 18:28:49] Set ATHENA_PROC_NUMBER=12
[2026-03-29 18:28:49] Set ATHENA_CORE_NUMBER=12
[2026-03-29 18:28:49] Starting ATLAS job with PandaID=7071868293
[2026-03-29 18:28:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 19:43:41]  *** The last 200 lines of the pilot log: ***
[2026-03-29 19:43:41]  status=None
[2026-03-29 19:43:41]  status_code=0
[2026-03-29 19:43:41]  storage_token=
[2026-03-29 19:43:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7071868293/log.49263200._003773.job.log.tgz.1
[2026-03-29 19:43:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/13/log.49263200._003773.job.log.tgz.1
[2026-03-29 19:43:41]  workdir=None
[2026-03-29 19:43:41] ]
[2026-03-29 19:43:41] 2026-03-29 23:43:05,547 | INFO     | transferring file log.49263200._003773.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7071868293/log.49263200._003773.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-29 19:43:41] 2026-03-29 23:43:05,548 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7071868293/log.49263200._003773.job.log.tgz.1 /tmp/boinchome/slots/0/log.49263200._003773.job
[2026-03-29 19:43:41] 2026-03-29 23:43:05,565 | INFO     | adding to output.list: log.49263200._003773.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/13/log.49263200._003773.job.log.tg
[2026-03-29 19:43:41] 2026-03-29 23:43:05,566 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-29 19:43:41] 2026-03-29 23:43:05,566 | INFO     | summary of transferred files:
[2026-03-29 19:43:41] 2026-03-29 23:43:05,566 | INFO     |  -- lfn=log.49263200._003773.job.log.tgz.1, status_code=0, status=transferred
[2026-03-29 19:43:41] 2026-03-29 23:43:05,566 | INFO     | stage-out finished correctly
[2026-03-29 19:43:41] 2026-03-29 23:43:06,893 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-29 19:43:41] 2026-03-29 23:43:07,381 | INFO     | time since job start (4443s) is within the limit (345600.0s)
[2026-03-29 19:43:41] 2026-03-29 23:43:08,506 | INFO     | PID=19207 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-29 19:43:41] 2026-03-29 23:43:09,033 | INFO     | job 7071868293 has state=finished
[2026-03-29 19:43:41] 2026-03-29 23:43:09,034 | INFO     | preparing for final server update for job 7071868293 in state='finished'
[2026-03-29 19:43:41] 2026-03-29 23:43:09,034 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7071868293/jobReport.json
[2026-03-29 19:43:41] 2026-03-29 23:43:09,037 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-29 19:43:41] 2026-03-29 23:43:09,037 | INFO     | this job has now completed (state=finished)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,038 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,038 | INFO     | log transfer has been attempted: DONE
[2026-03-29 19:43:41] 2026-03-29 23:43:09,038 | INFO     | job 7071868293 has finished - writing final server update
[2026-03-29 19:43:41] 2026-03-29 23:43:09,038 | INFO     | total number of processed events: 400 (read)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,040 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7071868293/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,041 | INFO     | extracted standard info from prmon json
[2026-03-29 19:43:41] 2026-03-29 23:43:09,041 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 19:43:41] 2026-03-29 23:43:09,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 19:43:41] 2026-03-29 23:43:09,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 19:43:41] 2026-03-29 23:43:09,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 19:43:41] 2026-03-29 23:43:09,044 | INFO     | fitting pss+swap vs Time
[2026-03-29 19:43:41] 2026-03-29 23:43:09,044 | INFO     | sum of square deviations: 89127252.5
[2026-03-29 19:43:41] 2026-03-29 23:43:09,044 | INFO     | sum of deviations: -7521038066.0
[2026-03-29 19:43:41] 2026-03-29 23:43:09,044 | INFO     | mean x: 1774825655.5
[2026-03-29 19:43:41] 2026-03-29 23:43:09,045 | INFO     | mean y: 2870627.3636363638
[2026-03-29 19:43:41] 2026-03-29 23:43:09,045 | INFO     | intersect: 149772227822.89597
[2026-03-29 19:43:41] 2026-03-29 23:43:09,045 | INFO     | chi2: 0.06324559747479601
[2026-03-29 19:43:41] 2026-03-29 23:43:09,045 | INFO     | current memory leak: -84.39 B/s (using 66 data points, chi2=0.06)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,046 | INFO     | could have reported an average CPU frequency of 2394 MHz (6 samples)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,046 | INFO     | ..............................
[2026-03-29 19:43:41] 2026-03-29 23:43:09,046 | INFO     | . Timing measurements:
[2026-03-29 19:43:41] 2026-03-29 23:43:09,046 | INFO     | . get job = 0 s
[2026-03-29 19:43:41] 2026-03-29 23:43:09,047 | INFO     | . initial setup = 6 s
[2026-03-29 19:43:41] 2026-03-29 23:43:09,047 | INFO     | . payload setup = 8 s
[2026-03-29 19:43:41] 2026-03-29 23:43:09,047 | INFO     | . stage-in = 0 s
[2026-03-29 19:43:41] 2026-03-29 23:43:09,047 | INFO     | . payload execution = 4416 s
[2026-03-29 19:43:41] 2026-03-29 23:43:09,047 | INFO     | . stage-out = 0 s
[2026-03-29 19:43:41] 2026-03-29 23:43:09,047 | INFO     | . log creation = 0 s
[2026-03-29 19:43:41] 2026-03-29 23:43:09,048 | INFO     | ..............................
[2026-03-29 19:43:41] 2026-03-29 23:43:09,127 | INFO     | 
[2026-03-29 19:43:41] 2026-03-29 23:43:09,127 | INFO     | job summary report
[2026-03-29 19:43:41] 2026-03-29 23:43:09,127 | INFO     | --------------------------------------------------
[2026-03-29 19:43:41] 2026-03-29 23:43:09,187 | INFO     | PanDA job id: 7071868293
[2026-03-29 19:43:41] 2026-03-29 23:43:09,188 | INFO     | task id: 49263200
[2026-03-29 19:43:41] 2026-03-29 23:43:09,188 | INFO     | errors: (none)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,188 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 19:43:41] 2026-03-29 23:43:09,189 | INFO     | pilot state: finished 
[2026-03-29 19:43:41] 2026-03-29 23:43:09,189 | INFO     | transexitcode: 0
[2026-03-29 19:43:41] 2026-03-29 23:43:09,189 | INFO     | exeerrorcode: 0
[2026-03-29 19:43:41] 2026-03-29 23:43:09,189 | INFO     | exeerrordiag: 
[2026-03-29 19:43:41] 2026-03-29 23:43:09,190 | INFO     | exitcode: 0
[2026-03-29 19:43:41] 2026-03-29 23:43:09,190 | INFO     | exitmsg: OK
[2026-03-29 19:43:41] 2026-03-29 23:43:09,190 | INFO     | cpuconsumptiontime: 47963 s
[2026-03-29 19:43:41] 2026-03-29 23:43:09,190 | INFO     | nevents: 400
[2026-03-29 19:43:41] 2026-03-29 23:43:09,190 | INFO     | neventsw: 0
[2026-03-29 19:43:41] 2026-03-29 23:43:09,190 | INFO     | pid: 23629
[2026-03-29 19:43:41] 2026-03-29 23:43:09,191 | INFO     | pgrp: 23629
[2026-03-29 19:43:41] 2026-03-29 23:43:09,191 | INFO     | corecount: 12
[2026-03-29 19:43:41] 2026-03-29 23:43:09,191 | INFO     | event service: False
[2026-03-29 19:43:41] 2026-03-29 23:43:09,191 | INFO     | sizes: {0: 2280042, 1: 2280248, 11: 2280276, 4427: 2306331, 4430: 2315329, 4431: 2315385, 4433: 2315707}
[2026-03-29 19:43:41] 2026-03-29 23:43:09,191 | INFO     | --------------------------------------------------
[2026-03-29 19:43:41] 2026-03-29 23:43:09,192 | INFO     | 
[2026-03-29 19:43:41] 2026-03-29 23:43:09,192 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-29 19:43:41] 2026-03-29 23:43:09,212 | WARNING  | process 23629 can no longer be monitored (due to stat problems) - aborting
[2026-03-29 19:43:41] 2026-03-29 23:43:09,212 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7071868293/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,213 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7071868293/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,213 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,214 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-29 19:43:41] 2026-03-29 23:43:09,214 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,214 | WARNING  | maxPSS not found in memory monitor output
[2026-03-29 19:43:41] 2026-03-29 23:43:09,214 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,215 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,215 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,215 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,215 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,216 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4599704 B
[2026-03-29 19:43:41] 2026-03-29 23:43:09,216 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,216 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,216 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15839 B
[2026-03-29 19:43:41] 2026-03-29 23:43:09,216 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,216 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-29 19:43:41] 2026-03-29 23:43:09,216 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,217 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,217 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,217 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,220 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,220 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 19:43:41] 2026-03-29 23:43:09,220 | INFO     | job 7071868293 has completed (purged errors)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,221 | INFO     | overall cleanup function is called
[2026-03-29 19:43:41] 2026-03-29 23:43:09,228 | INFO     | sufficient remaining disk space (29318184960 B)
[2026-03-29 19:43:41] 2026-03-29 23:43:09,228 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-29 19:43:41] 2026-03-29 23:43:09,228 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7071868293/HITS.49263200._003773.pool.root.1 since it does not exist
[2026-03-29 19:43:41] 2026-03-29 23:43:09,324 | INFO     | number of running child processes to parent process 23629: 1
[2026-03-29 19:43:41] 2026-03-29 23:43:09,324 | INFO     | maximum number of monitored processes: 6
[2026-03-29 19:43:41] 2026-03-29 23:43:09,324 | INFO     | aborting job monitoring since job object (job id=7071868293) has expired
[2026-03-29 19:43:41] 2026-03-29 23:43:10,228 | INFO     | --- collectZombieJob: --- 10, [23629]
[2026-03-29 19:43:41] 2026-03-29 23:43:10,228 | INFO     | zombie collector waiting for pid 23629
[2026-03-29 19:43:41] 2026-03-29 23:43:10,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 19:43:41] 2026-03-29 23:43:10,228 | INFO     | collected zombie processes
[2026-03-29 19:43:41] 2026-03-29 23:43:10,228 | INFO     | will attempt to kill all subprocesses of pid=23629
[2026-03-29 19:43:41] 2026-03-29 23:43:10,322 | INFO     | process IDs to be killed: [23629] (in reverse order)
[2026-03-29 19:43:41] 2026-03-29 23:43:10,366 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 19:43:41] 2026-03-29 23:43:10,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 19:43:41] 2026-03-29 23:43:10,368 | INFO     | did not find any defunct processes belonging to 23629
[2026-03-29 19:43:41] 2026-03-29 23:43:10,371 | INFO     | did not find any defunct processes belonging to 23629
[2026-03-29 19:43:41] 2026-03-29 23:43:10,371 | INFO     | ready for new job
[2026-03-29 19:43:41] 2026-03-29 23:43:10,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 19:43:41] 2026-03-29 23:43:10,372 | INFO     | **************************************
[2026-03-29 19:43:41] 2026-03-29 23:43:10,372 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 19:43:41] 2026-03-29 23:43:10,372 | INFO     | **************************************
[2026-03-29 19:43:41] 2026-03-29 23:43:10,372 | INFO     | 
[2026-03-29 19:43:41] 2026-03-29 23:43:10,373 | INFO     | architecture information:
[2026-03-29 19:43:41] 2026-03-29 23:43:10,373 | INFO     | executing command: cat /etc/os-release
[2026-03-29 19:43:41] 2026-03-29 23:43:10,385 | INFO     | cat /etc/os-release:
[2026-03-29 19:43:41] NAME="CentOS Linux"
[2026-03-29 19:43:41] VERSION="7 (Core)"
[2026-03-29 19:43:41] ID="centos"
[2026-03-29 19:43:41] ID_LIKE="rhel fedora"
[2026-03-29 19:43:41] VERSION_ID="7"
[2026-03-29 19:43:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 19:43:41] ANSI_COLOR="0;31"
[2026-03-29 19:43:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 19:43:41] HOME_URL="https://www.centos.org/"
[2026-03-29 19:43:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 19:43:41] 
[2026-03-29 19:43:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 19:43:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 19:43:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 19:43:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 19:43:41] 
[2026-03-29 19:43:41] 2026-03-29 23:43:10,385 | INFO     | **************************************
[2026-03-29 19:43:41] 2026-03-29 23:43:10,888 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-29 19:43:41] 2026-03-29 23:43:10,900 | INFO     | sufficient remaining disk space (29319233536 B)
[2026-03-29 19:43:41] 2026-03-29 23:43:10,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 19:43:41] 2026-03-29 23:43:10,901 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 19:43:41] 2026-03-29 23:43:10,901 | INFO     | update_server=False
[2026-03-29 19:43:41] 2026-03-29 23:43:10,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 19:43:41] 2026-03-29 23:43:10,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 19:43:41] 2026-03-29 23:43:10,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 19:43:41] 2026-03-29 23:43:10,902 | INFO     | aborting loop
[2026-03-29 19:43:41] 2026-03-29 23:43:11,035 | INFO     | all data control threads have been joined
[2026-03-29 19:43:41] 2026-03-29 23:43:11,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 19:43:41] 2026-03-29 23:43:11,437 | INFO     | all job control threads have been joined
[2026-03-29 19:43:41] 2026-03-29 23:43:11,464 | INFO     | [monitor] cgroup control has ended
[2026-03-29 19:43:41] 2026-03-29 23:43:11,707 | INFO     | all payload control threads have been joined
[2026-03-29 19:43:41] 2026-03-29 23:43:11,903 | INFO     | [job] job monitor thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:11,905 | INFO     | [job] queue monitor thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:11,906 | INFO     | [job] retrieve thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:12,039 | INFO     | [data] control thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:12,374 | INFO     | [payload] validate_post thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:12,442 | INFO     | [job] control thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:12,571 | INFO     | [payload] failed_post thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:12,709 | INFO     | [payload] control thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:12,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 19:43:41] 2026-03-29 23:43:13,155 | INFO     | [data] copytool_out thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:13,174 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:13,176 | INFO     | [job] validate thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:13,186 | INFO     | [data] copytool_in thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:13,193 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:13,290 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:16,978 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:20,985 | INFO     | job.realtimelogging is not enabled
[2026-03-29 19:43:41] 2026-03-29 23:43:21,990 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 19:43:41] 2026-03-29 23:43:23,017 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826375243584)>', '<ExcThread(monitor, started 139825806042880)>']
[2026-03-29 19:43:41] 2026-03-29 23:43:28,035 | INFO     | all workflow threads have been joined
[2026-03-29 19:43:41] 2026-03-29 23:43:28,035 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 19:43:41] 2026-03-29 23:43:28,035 | INFO     | traces error code: 0
[2026-03-29 19:43:41] 2026-03-29 23:43:28,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 19:43:41] 2026-03-29 23:43:40,698 | INFO     | PID=19207 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-29 19:43:41] 2026-03-29 23:43:40,699 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 19:43:41] 2026-03-29 23:43:40,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 19:43:41] 2026-03-29 23:43:40,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 19:43:41] 2026-03-29 23:43:40,699 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 19:43:41] 2026-03-29 23:43:40,699 | INFO     | [monitor] control thread has ended
[2026-03-29 19:43:41] 2026-03-29 23:43:40,789 [wrapper] ==== pilot stdout END ====
[2026-03-29 19:43:41] 2026-03-29 23:43:40,792 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 19:43:41] 2026-03-29 23:43:40,795 [wrapper] pilotpid: 19207
[2026-03-29 19:43:41] 2026-03-29 23:43:40,798 [wrapper] Pilot exit status: 0
[2026-03-29 19:43:41] 2026-03-29 23:43:40,807 [wrapper] pandaids: 7071868293
[2026-03-29 19:43:41] 2026-03-29 23:43:40,835 [wrapper] cleanup supervisor_pilot  9738 19208
[2026-03-29 19:43:41] 2026-03-29 23:43:40,839 [wrapper] Test setup, not cleaning
[2026-03-29 19:43:41] 2026-03-29 23:43:40,843 [wrapper] apfmon messages muted
[2026-03-29 19:43:41] 2026-03-29 23:43:40,846 [wrapper] ==== wrapper stdout END ====
[2026-03-29 19:43:41] 2026-03-29 23:43:40,849 [wrapper] ==== wrapper stderr END ====
[2026-03-29 19:43:41]  *** Error codes and diagnostics ***
[2026-03-29 19:43:41]     "exeErrorCode": 0,
[2026-03-29 19:43:41]     "exeErrorDiag": "",
[2026-03-29 19:43:41]     "pilotErrorCode": 0,
[2026-03-29 19:43:41]     "pilotErrorDiag": "",
[2026-03-29 19:43:41]  *** Listing of results directory ***
[2026-03-29 19:43:41] total 417992
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas    585013 Mar 29 15:59 pilot3.tar.gz
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas      5118 Mar 29 15:59 queuedata.json
[2026-03-29 19:43:41] -rwx------ 1 boincer umatlas     36322 Mar 29 15:59 runpilot2-wrapper.sh
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas       100 Mar 29 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 19:43:41] -rwxr-xr-x 1 boincer umatlas      7986 Mar 29 18:28 run_atlas
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas       105 Mar 29 18:28 job.xml
[2026-03-29 19:43:41] -rw-r--r-- 2 boincer umatlas 223243022 Mar 29 18:28 EVNT.49263198._000151.pool.root.1
[2026-03-29 19:43:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 29 18:28 start_atlas.sh
[2026-03-29 19:43:41] drwxrwx--x 2 boincer umatlas      4096 Mar 29 18:28 shared
[2026-03-29 19:43:41] -rw-r--r-- 2 boincer umatlas    597539 Mar 29 18:28 input.tar.gz
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas         0 Mar 29 18:28 boinc_lockfile
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas      2573 Mar 29 18:28 pandaJob.out
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas        57 Mar 29 18:28 setup.sh.local
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas   1004063 Mar 29 18:28 agis_schedconf.cvmfs.json
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas   1511579 Mar 29 18:28 agis_ddmendpoints.agis.ALL.json
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas       434 Mar 29 18:29 workernode_map.json
[2026-03-29 19:43:41] drwx------ 5 boincer umatlas      4096 Mar 29 18:29 pilot3
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas      5953 Mar 29 19:40 init_data.xml
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas 198761877 Mar 29 19:42 HITS.49263200._003773.pool.root.1
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas       530 Mar 29 19:42 boinc_task_state.xml
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas      1057 Mar 29 19:43 memory_monitor_summary.json
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas        95 Mar 29 19:43 pilot_heartbeat.json
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas    396146 Mar 29 19:43 log.49263200._003773.job.log.tgz.1
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas      6424 Mar 29 19:43 heartbeat.json
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas        27 Mar 29 19:43 wrapper_checkpoint.txt
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas       745 Mar 29 19:43 pilotlog.txt
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas    646936 Mar 29 19:43 log.49263200._003773.job.log.1
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas       357 Mar 29 19:43 output.list
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas      8192 Mar 29 19:43 boinc_mmap_file
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas       620 Mar 29 19:43 runtime_log
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas   1064960 Mar 29 19:43 result.tar.gz
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas      9343 Mar 29 19:43 runtime_log.err
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas       659 Mar 29 19:43 8MxLDmGTBR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmScNKDm3aOhCn.diag
[2026-03-29 19:43:41] -rw-r--r-- 1 boincer umatlas     22269 Mar 29 19:43 stderr.txt
[2026-03-29 19:43:41] HITS file was successfully produced:
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas 198761877 Mar 29 19:42 shared/HITS.pool.root.1
[2026-03-29 19:43:41]  *** Contents of shared directory: ***
[2026-03-29 19:43:41] total 413760
[2026-03-29 19:43:41] -rw-r--r-- 2 boincer umatlas 223243022 Mar 29 18:28 ATLAS.root_0
[2026-03-29 19:43:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 29 18:28 start_atlas.sh
[2026-03-29 19:43:41] -rw-r--r-- 2 boincer umatlas    597539 Mar 29 18:28 input.tar.gz
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas 198761877 Mar 29 19:42 HITS.pool.root.1
[2026-03-29 19:43:41] -rw------- 1 boincer umatlas   1064960 Mar 29 19:43 result.tar.gz
19:43:42 (15518): run_atlas exited; CPU time 47885.448812
19:43:42 (15518): called boinc_finish(0)

</stderr_txt>
]]>

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