Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:49:38 (3474750): wrapper (7.7.26015): starting
11:49:38 (3474750): wrapper: running run_atlas (--nthreads 2)
[2026-03-30 11:49:38] Arguments: --nthreads 2
[2026-03-30 11:49:38] Threads: 2
[2026-03-30 11:49:38] Checking for CVMFS
[2026-03-30 11:49:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 11:49:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 11:49:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 11:49:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 11:49:38] 2.9.2.0 3201293 3727 55432 157876 0 50 19332940 36864000 0 130560 0 1077977 99.977 137589 14225 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-30 11:49:38] CVMFS is ok
[2026-03-30 11:49:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 11:49:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 11:49:38] Further information can be found at the LHC@home message board.
[2026-03-30 11:49:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 11:49:38] Checking for apptainer binary...
[2026-03-30 11:49:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 11:49:38] Running /usr/bin/apptainer --version
[2026-03-30 11:49:38] apptainer version 1.4.1-1.1
[2026-03-30 11:49:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 11:49:38] magicA244
[2026-03-30 11:49:38] apptainer works
[2026-03-30 11:49:38] Set ATHENA_PROC_NUMBER=2
[2026-03-30 11:49:38] Set ATHENA_CORE_NUMBER=2
[2026-03-30 11:49:38] Starting ATLAS job with PandaID=7071900822
[2026-03-30 11:49:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 14:01:29]  *** The last 200 lines of the pilot log: ***
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | job 7071900822 has completed (purged errors)
[2026-03-30 14:01:29] 2026-03-30 12:00:57,608 | INFO     | overall cleanup function is called
[2026-03-30 14:01:29] 2026-03-30 12:00:58,614 | INFO     | --- collectZombieJob: --- 10, [3483192]
[2026-03-30 14:01:29] 2026-03-30 12:00:58,615 | INFO     | zombie collector waiting for pid 3483192
[2026-03-30 14:01:29] 2026-03-30 12:00:58,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 14:01:29] 2026-03-30 12:00:58,615 | INFO     | collected zombie processes
[2026-03-30 14:01:29] 2026-03-30 12:00:58,616 | INFO     | will attempt to kill all subprocesses of pid=3483192
[2026-03-30 14:01:29] 2026-03-30 12:00:58,645 | INFO     | process IDs to be killed: [3483192] (in reverse order)
[2026-03-30 14:01:29] 2026-03-30 12:00:58,666 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 14:01:29] 2026-03-30 12:00:58,666 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 14:01:29] 2026-03-30 12:00:58,667 | INFO     | did not find any defunct processes belonging to 3483192
[2026-03-30 14:01:29] 2026-03-30 12:00:58,667 | INFO     | did not find any defunct processes belonging to 3483192
[2026-03-30 14:01:29] 2026-03-30 12:00:58,668 | INFO     | ready for new job
[2026-03-30 14:01:29] 2026-03-30 12:00:58,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-30 14:01:29] 2026-03-30 12:00:58,668 | INFO     | **************************************
[2026-03-30 14:01:29] 2026-03-30 12:00:58,668 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-30 14:01:29] 2026-03-30 12:00:58,668 | INFO     | **************************************
[2026-03-30 14:01:29] 2026-03-30 12:00:58,668 | INFO     | 
[2026-03-30 14:01:29] 2026-03-30 12:00:58,668 | INFO     | architecture information:
[2026-03-30 14:01:29] 2026-03-30 12:00:58,669 | INFO     | executing command: cat /etc/os-release
[2026-03-30 14:01:29] 2026-03-30 12:00:58,678 | INFO     | cat /etc/os-release:
[2026-03-30 14:01:29] NAME="CentOS Linux"
[2026-03-30 14:01:29] VERSION="7 (Core)"
[2026-03-30 14:01:29] ID="centos"
[2026-03-30 14:01:29] ID_LIKE="rhel fedora"
[2026-03-30 14:01:29] VERSION_ID="7"
[2026-03-30 14:01:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 14:01:29] ANSI_COLOR="0;31"
[2026-03-30 14:01:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 14:01:29] HOME_URL="https://www.centos.org/"
[2026-03-30 14:01:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 14:01:29] 
[2026-03-30 14:01:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 14:01:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 14:01:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 14:01:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 14:01:29] 
[2026-03-30 14:01:29] 2026-03-30 12:00:58,678 | INFO     | **************************************
[2026-03-30 14:01:29] 2026-03-30 12:00:59,181 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-30 14:01:29] 2026-03-30 12:00:59,193 | INFO     | sufficient remaining disk space (505087524864 B)
[2026-03-30 14:01:29] 2026-03-30 12:00:59,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 14:01:29] 2026-03-30 12:00:59,194 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 14:01:29] 2026-03-30 12:00:59,194 | INFO     | update_server=False
[2026-03-30 14:01:29] 2026-03-30 12:00:59,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-30 14:01:29] 2026-03-30 12:00:59,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 14:01:29] 2026-03-30 12:00:59,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 14:01:29] 2026-03-30 12:00:59,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 14:01:29] 2026-03-30 12:00:59,579 | INFO     | aborting loop
[2026-03-30 14:01:29] 2026-03-30 12:00:59,723 | INFO     | all job control threads have been joined
[2026-03-30 14:01:29] 2026-03-30 12:00:59,940 | INFO     | all payload control threads have been joined
[2026-03-30 14:01:29] 2026-03-30 12:00:59,940 | INFO     | all data control threads have been joined
[2026-03-30 14:01:29] 2026-03-30 12:01:00,200 | INFO     | [job] queue monitor thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:00,200 | INFO     | [job] retrieve thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:00,211 | INFO     | [job] validate thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:00,356 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:00,379 | INFO     | [payload] validate_post thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:00,389 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:00,395 | INFO     | [data] copytool_in thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:00,585 | INFO     | [job] job monitor thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:00,729 | INFO     | [job] control thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:00,945 | INFO     | [payload] control thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:00,946 | INFO     | [data] control thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:01,087 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:01,200 | INFO     | [data] copytool_out thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:01,341 | INFO     | [payload] failed_post thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:01,531 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:01,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 14:01:29] 2026-03-30 12:01:05,929 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 14:01:29] 2026-03-30 12:01:11,099 | INFO     | [monitor] cgroup control has ended
[2026-03-30 14:01:29] 2026-03-30 12:01:12,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140682591946560)>', '<ExcThread(monitor, started 140682098362112)>']
[2026-03-30 14:01:29] 2026-03-30 12:01:17,530 | INFO     | all workflow threads have been joined
[2026-03-30 14:01:29] 2026-03-30 12:01:17,530 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 14:01:29] 2026-03-30 12:01:17,531 | INFO     | traces error code: 0
[2026-03-30 14:01:29] 2026-03-30 12:01:17,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 14:01:29] 2026-03-30 12:01:29,003 | INFO     | PID=3478780 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-30 14:01:29] 2026-03-30 12:01:29,003 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 14:01:29] 2026-03-30 12:01:29,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 14:01:29] 2026-03-30 12:01:29,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 14:01:29] 2026-03-30 12:01:29,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 14:01:29] 2026-03-30 12:01:29,003 | INFO     | [monitor] control thread has ended
[2026-03-30 14:01:29] 2026-03-30 12:01:29,042 [wrapper] ==== pilot stdout END ====
[2026-03-30 14:01:29] 2026-03-30 12:01:29,045 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 14:01:29] 2026-03-30 12:01:29,047 [wrapper] pilotpid: 3478780
[2026-03-30 14:01:29] 2026-03-30 12:01:29,050 [wrapper] Pilot exit status: 0
[2026-03-30 14:01:29] 2026-03-30 12:01:29,056 [wrapper] pandaids: 7071900822
[2026-03-30 14:01:29] 2026-03-30 12:01:29,069 [wrapper] cleanup supervisor_pilot 3488528 3478781
[2026-03-30 14:01:29] 2026-03-30 12:01:29,070 [wrapper] Test setup, not cleaning
[2026-03-30 14:01:29] 2026-03-30 12:01:29,073 [wrapper] apfmon messages muted
[2026-03-30 14:01:29] 2026-03-30 12:01:29,075 [wrapper] ==== wrapper stdout END ====
[2026-03-30 14:01:29] 2026-03-30 12:01:29,077 [wrapper] ==== wrapper stderr END ====
[2026-03-30 14:01:29]  *** Error codes and diagnostics ***
[2026-03-30 14:01:29]     "exeErrorCode": 0,
[2026-03-30 14:01:29]     "exeErrorDiag": "",
[2026-03-30 14:01:29]     "pilotErrorCode": 0,
[2026-03-30 14:01:29]     "pilotErrorDiag": "",
[2026-03-30 14:01:29]  *** Listing of results directory ***
[2026-03-30 14:01:29] total 421812
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc    585013 Mar 29 23:08 pilot3.tar.gz
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc      5118 Mar 29 23:08 queuedata.json
[2026-03-30 14:01:29] -rwx------ 1 boinc boinc     36322 Mar 29 23:09 runpilot2-wrapper.sh
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc       100 Mar 30 11:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 14:01:29] -rwxr-xr-x 1 boinc boinc      7986 Mar 30 11:49 run_atlas
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc       105 Mar 30 11:49 job.xml
[2026-03-30 14:01:29] -rw-r--r-- 2 boinc boinc 226471279 Mar 30 11:49 EVNT.49263206._000268.pool.root.1
[2026-03-30 14:01:29] -rw-r--r-- 2 boinc boinc    597541 Mar 30 11:49 input.tar.gz
[2026-03-30 14:01:29] -rw-r--r-- 2 boinc boinc     15845 Mar 30 11:49 start_atlas.sh
[2026-03-30 14:01:29] drwxrwx--x 2 boinc boinc      4096 Mar 30 11:49 shared
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc         0 Mar 30 11:49 boinc_setup_complete
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc      6208 Mar 30 11:49 init_data.xml
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc         0 Mar 30 11:49 boinc_lockfile
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc      2573 Mar 30 11:49 pandaJob.out
[2026-03-30 14:01:29] -rw------- 1 boinc boinc   1004338 Mar 30 11:49 agis_schedconf.cvmfs.json
[2026-03-30 14:01:29] -rw------- 1 boinc boinc   1511579 Mar 30 11:49 agis_ddmendpoints.agis.ALL.json
[2026-03-30 14:01:29] -rw------- 1 boinc boinc       429 Mar 30 11:50 workernode_map.json
[2026-03-30 14:01:29] drwx------ 5 boinc boinc      4096 Mar 30 11:50 pilot3
[2026-03-30 14:01:29] -rw------- 1 boinc boinc        95 Mar 30 14:00 pilot_heartbeat.json
[2026-03-30 14:01:29] -rw------- 1 boinc boinc 198736624 Mar 30 14:00 HITS.49263208._005457.pool.root.1
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc       529 Mar 30 14:00 boinc_task_state.xml
[2026-03-30 14:01:29] -rw------- 1 boinc boinc      1010 Mar 30 14:00 memory_monitor_summary.json
[2026-03-30 14:01:29] -rw------- 1 boinc boinc    274465 Mar 30 14:00 log.49263208._005457.job.log.tgz.1
[2026-03-30 14:01:29] -rw------- 1 boinc boinc      6298 Mar 30 14:00 heartbeat.json
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc      8192 Mar 30 14:01 boinc_mmap_file
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc        27 Mar 30 14:01 wrapper_checkpoint.txt
[2026-03-30 14:01:29] -rw------- 1 boinc boinc       747 Mar 30 14:01 pilotlog.txt
[2026-03-30 14:01:29] -rw------- 1 boinc boinc   1129180 Mar 30 14:01 log.49263208._005457.job.log.1
[2026-03-30 14:01:29] -rw------- 1 boinc boinc       357 Mar 30 14:01 output.list
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc       620 Mar 30 14:01 runtime_log
[2026-03-30 14:01:29] -rw------- 1 boinc boinc   1423360 Mar 30 14:01 result.tar.gz
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc      8911 Mar 30 14:01 runtime_log.err
[2026-03-30 14:01:29] -rw------- 1 boinc boinc       661 Mar 30 14:01 FeENDm9YCR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmmsNKDmZkPsCo.diag
[2026-03-30 14:01:29] -rw-r--r-- 1 boinc boinc     12349 Mar 30 14:01 stderr.txt
[2026-03-30 14:01:29] HITS file was successfully produced:
[2026-03-30 14:01:29] -rw------- 1 boinc boinc 198736624 Mar 30 14:00 shared/HITS.pool.root.1
[2026-03-30 14:01:29]  *** Contents of shared directory: ***
[2026-03-30 14:01:29] total 417236
[2026-03-30 14:01:29] -rw-r--r-- 2 boinc boinc 226471279 Mar 30 11:49 ATLAS.root_0
[2026-03-30 14:01:29] -rw-r--r-- 2 boinc boinc    597541 Mar 30 11:49 input.tar.gz
[2026-03-30 14:01:29] -rw-r--r-- 2 boinc boinc     15845 Mar 30 11:49 start_atlas.sh
[2026-03-30 14:01:29] -rw------- 1 boinc boinc 198736624 Mar 30 14:00 HITS.pool.root.1
[2026-03-30 14:01:29] -rw------- 1 boinc boinc   1423360 Mar 30 14:01 result.tar.gz
14:01:30 (3474750): run_atlas exited; CPU time 15152.235042
14:01:30 (3474750): called boinc_finish(0)

</stderr_txt>
]]>

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