Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:37:29 (3591793): wrapper (7.7.26015): starting
10:37:29 (3591793): wrapper: running run_atlas (--nthreads 2)
[2026-03-30 10:37:29] Arguments: --nthreads 2
[2026-03-30 10:37:29] Threads: 2
[2026-03-30 10:37:29] Checking for CVMFS
[2026-03-30 10:37:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 10:37:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 10:37:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 10:37:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 10:37:29] 2.9.2.0 3274070 3153 56584 157873 1 49 27684626 36864001 0 130560 0 854341 99.974 118746 17994 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-30 10:37:29] CVMFS is ok
[2026-03-30 10:37:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 10:37:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 10:37:29] Further information can be found at the LHC@home message board.
[2026-03-30 10:37:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 10:37:29] Checking for apptainer binary...
[2026-03-30 10:37:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 10:37:29] Running /usr/bin/apptainer --version
[2026-03-30 10:37:29] apptainer version 1.4.1-1.1
[2026-03-30 10:37:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 10:37:29] atlasA219
[2026-03-30 10:37:29] apptainer works
[2026-03-30 10:37:29] Set ATHENA_PROC_NUMBER=2
[2026-03-30 10:37:29] Set ATHENA_CORE_NUMBER=2
[2026-03-30 10:37:29] Starting ATLAS job with PandaID=7071868128
[2026-03-30 10:37:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 12:53:14]  *** The last 200 lines of the pilot log: ***
[2026-03-30 12:53:14] 2026-03-30 10:52:44,060 | INFO     | process IDs to be killed: [3600243] (in reverse order)
[2026-03-30 12:53:14] 2026-03-30 10:52:44,086 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 12:53:14] 2026-03-30 10:52:44,086 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 12:53:14] 2026-03-30 10:52:44,087 | INFO     | did not find any defunct processes belonging to 3600243
[2026-03-30 12:53:14] 2026-03-30 10:52:44,088 | INFO     | did not find any defunct processes belonging to 3600243
[2026-03-30 12:53:14] 2026-03-30 10:52:44,088 | INFO     | ready for new job
[2026-03-30 12:53:14] 2026-03-30 10:52:44,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-30 12:53:14] 2026-03-30 10:52:44,089 | INFO     | **************************************
[2026-03-30 12:53:14] 2026-03-30 10:52:44,089 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-30 12:53:14] 2026-03-30 10:52:44,089 | INFO     | **************************************
[2026-03-30 12:53:14] 2026-03-30 10:52:44,089 | INFO     | 
[2026-03-30 12:53:14] 2026-03-30 10:52:44,089 | INFO     | architecture information:
[2026-03-30 12:53:14] 2026-03-30 10:52:44,089 | INFO     | executing command: cat /etc/os-release
[2026-03-30 12:53:14] 2026-03-30 10:52:44,099 | INFO     | cat /etc/os-release:
[2026-03-30 12:53:14] NAME="CentOS Linux"
[2026-03-30 12:53:14] VERSION="7 (Core)"
[2026-03-30 12:53:14] ID="centos"
[2026-03-30 12:53:14] ID_LIKE="rhel fedora"
[2026-03-30 12:53:14] VERSION_ID="7"
[2026-03-30 12:53:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 12:53:14] ANSI_COLOR="0;31"
[2026-03-30 12:53:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 12:53:14] HOME_URL="https://www.centos.org/"
[2026-03-30 12:53:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 12:53:14] 
[2026-03-30 12:53:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 12:53:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 12:53:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 12:53:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 12:53:14] 
[2026-03-30 12:53:14] 2026-03-30 10:52:44,099 | INFO     | **************************************
[2026-03-30 12:53:14] 2026-03-30 10:52:44,602 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-30 12:53:14] 2026-03-30 10:52:44,612 | INFO     | sufficient remaining disk space (181590294528 B)
[2026-03-30 12:53:14] 2026-03-30 10:52:44,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 12:53:14] 2026-03-30 10:52:44,612 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 12:53:14] 2026-03-30 10:52:44,612 | INFO     | update_server=False
[2026-03-30 12:53:14] 2026-03-30 10:52:44,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-30 12:53:14] 2026-03-30 10:52:44,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 12:53:14] 2026-03-30 10:52:44,835 | INFO     | all data control threads have been joined
[2026-03-30 12:53:14] 2026-03-30 10:52:45,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 12:53:14] 2026-03-30 10:52:45,162 | INFO     | aborting loop
[2026-03-30 12:53:14] 2026-03-30 10:52:45,274 | INFO     | all job control threads have been joined
[2026-03-30 12:53:14] 2026-03-30 10:52:45,617 | INFO     | [job] retrieve thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:45,617 | INFO     | [job] queue monitor thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:45,686 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:45,840 | INFO     | [data] control thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:45,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 12:53:14] 2026-03-30 10:52:46,015 | INFO     | all payload control threads have been joined
[2026-03-30 12:53:14] 2026-03-30 10:52:46,123 | INFO     | [payload] validate_post thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:46,167 | INFO     | [job] job monitor thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:46,279 | INFO     | [job] control thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:46,325 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:46,581 | INFO     | [job] validate thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:46,613 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:46,746 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:46,867 | INFO     | [data] copytool_in thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:47,020 | INFO     | [payload] control thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:47,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 12:53:14] 2026-03-30 10:52:47,122 | INFO     | [payload] failed_post thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:47,867 | INFO     | [data] copytool_out thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:50,487 | INFO     | [monitor] cgroup control has ended
[2026-03-30 12:53:14] 2026-03-30 10:52:51,037 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 12:53:14] 2026-03-30 10:52:51,212 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173435152192)>', '<ExcThread(monitor, started 140172431718144)>']
[2026-03-30 12:53:14] 2026-03-30 10:52:56,212 | INFO     | all workflow threads have been joined
[2026-03-30 12:53:14] 2026-03-30 10:52:56,212 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 12:53:14] 2026-03-30 10:52:56,212 | INFO     | traces error code: 0
[2026-03-30 12:53:14] 2026-03-30 10:52:56,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 12:53:14] 2026-03-30 10:53:14,256 | INFO     | PID=3595822 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-30 12:53:14] 2026-03-30 10:53:14,256 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 12:53:14] 2026-03-30 10:53:14,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 12:53:14] 2026-03-30 10:53:14,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 12:53:14] 2026-03-30 10:53:14,256 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 12:53:14] 2026-03-30 10:53:14,256 | INFO     | [monitor] control thread has ended
[2026-03-30 12:53:14] 2026-03-30 10:53:14,299 [wrapper] ==== pilot stdout END ====
[2026-03-30 12:53:14] 2026-03-30 10:53:14,302 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 12:53:14] 2026-03-30 10:53:14,304 [wrapper] pilotpid: 3595822
[2026-03-30 12:53:14] 2026-03-30 10:53:14,307 [wrapper] Pilot exit status: 0
[2026-03-30 12:53:14] 2026-03-30 10:53:14,313 [wrapper] pandaids: 7071868128
[2026-03-30 12:53:14] 2026-03-30 10:53:14,328 [wrapper] cleanup supervisor_pilot 3612194 3595823
[2026-03-30 12:53:14] 2026-03-30 10:53:14,330 [wrapper] Test setup, not cleaning
[2026-03-30 12:53:14] 2026-03-30 10:53:14,332 [wrapper] apfmon messages muted
[2026-03-30 12:53:14] 2026-03-30 10:53:14,334 [wrapper] ==== wrapper stdout END ====
[2026-03-30 12:53:14] 2026-03-30 10:53:14,336 [wrapper] ==== wrapper stderr END ====
[2026-03-30 12:53:14]  *** Error codes and diagnostics ***
[2026-03-30 12:53:14]     "exeErrorCode": 0,
[2026-03-30 12:53:14]     "exeErrorDiag": "",
[2026-03-30 12:53:14]     "pilotErrorCode": 0,
[2026-03-30 12:53:14]     "pilotErrorDiag": "",
[2026-03-30 12:53:14]  *** Listing of results directory ***
[2026-03-30 12:53:14] total 417000
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc    585013 Mar 29 21:59 pilot3.tar.gz
[2026-03-30 12:53:14] -rwx------ 1 boinc boinc     36322 Mar 29 21:59 runpilot2-wrapper.sh
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc      5118 Mar 29 22:00 queuedata.json
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc       100 Mar 30 10:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 12:53:14] -rwxr-xr-x 1 boinc boinc      7986 Mar 30 10:37 run_atlas
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc       105 Mar 30 10:37 job.xml
[2026-03-30 12:53:14] -rw-r--r-- 2 boinc boinc 224761758 Mar 30 10:37 EVNT.49263206._000242.pool.root.1
[2026-03-30 12:53:14] -rw-r--r-- 2 boinc boinc    597536 Mar 30 10:37 input.tar.gz
[2026-03-30 12:53:14] -rw-r--r-- 2 boinc boinc     15845 Mar 30 10:37 start_atlas.sh
[2026-03-30 12:53:14] drwxrwx--x 2 boinc boinc      4096 Mar 30 10:37 shared
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc         0 Mar 30 10:37 boinc_setup_complete
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc      6207 Mar 30 10:37 init_data.xml
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc         0 Mar 30 10:37 boinc_lockfile
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc      2573 Mar 30 10:37 pandaJob.out
[2026-03-30 12:53:14] -rw------- 1 boinc boinc   1004121 Mar 30 10:37 agis_schedconf.cvmfs.json
[2026-03-30 12:53:14] -rw------- 1 boinc boinc   1511579 Mar 30 10:37 agis_ddmendpoints.agis.ALL.json
[2026-03-30 12:53:14] -rw------- 1 boinc boinc       422 Mar 30 10:37 workernode_map.json
[2026-03-30 12:53:14] drwx------ 5 boinc boinc      4096 Mar 30 10:37 pilot3
[2026-03-30 12:53:14] -rw------- 1 boinc boinc 195431015 Mar 30 12:52 HITS.49263208._004816.pool.root.1
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc       529 Mar 30 12:52 boinc_task_state.xml
[2026-03-30 12:53:14] -rw------- 1 boinc boinc      1018 Mar 30 12:52 memory_monitor_summary.json
[2026-03-30 12:53:14] -rw------- 1 boinc boinc    287367 Mar 30 12:52 log.49263208._004816.job.log.tgz.1
[2026-03-30 12:53:14] -rw------- 1 boinc boinc      6302 Mar 30 12:52 heartbeat.json
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc      8192 Mar 30 12:53 boinc_mmap_file
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc        27 Mar 30 12:53 wrapper_checkpoint.txt
[2026-03-30 12:53:14] -rw------- 1 boinc boinc       747 Mar 30 12:53 pilotlog.txt
[2026-03-30 12:53:14] -rw------- 1 boinc boinc        95 Mar 30 12:53 pilot_heartbeat.json
[2026-03-30 12:53:14] -rw------- 1 boinc boinc   1155392 Mar 30 12:53 log.49263208._004816.job.log.1
[2026-03-30 12:53:14] -rw------- 1 boinc boinc       357 Mar 30 12:53 output.list
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc       620 Mar 30 12:53 runtime_log
[2026-03-30 12:53:14] -rw------- 1 boinc boinc   1464320 Mar 30 12:53 result.tar.gz
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc      8911 Mar 30 12:53 runtime_log.err
[2026-03-30 12:53:14] -rw------- 1 boinc boinc       662 Mar 30 12:53 m52MDmbTBR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmDeNKDmbjr53n.diag
[2026-03-30 12:53:14] -rw-r--r-- 1 boinc boinc     10083 Mar 30 12:53 stderr.txt
[2026-03-30 12:53:14] HITS file was successfully produced:
[2026-03-30 12:53:14] -rw------- 1 boinc boinc 195431015 Mar 30 12:52 shared/HITS.pool.root.1
[2026-03-30 12:53:14]  *** Contents of shared directory: ***
[2026-03-30 12:53:14] total 412388
[2026-03-30 12:53:14] -rw-r--r-- 2 boinc boinc 224761758 Mar 30 10:37 ATLAS.root_0
[2026-03-30 12:53:14] -rw-r--r-- 2 boinc boinc    597536 Mar 30 10:37 input.tar.gz
[2026-03-30 12:53:14] -rw-r--r-- 2 boinc boinc     15845 Mar 30 10:37 start_atlas.sh
[2026-03-30 12:53:14] -rw------- 1 boinc boinc 195431015 Mar 30 12:52 HITS.pool.root.1
[2026-03-30 12:53:14] -rw------- 1 boinc boinc   1464320 Mar 30 12:53 result.tar.gz
12:53:16 (3591793): run_atlas exited; CPU time 15613.597692
12:53:16 (3591793): called boinc_finish(0)

</stderr_txt>
]]>

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