Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:30:42 (752300): wrapper (7.7.26015): starting
00:30:42 (752300): wrapper: running run_atlas (--nthreads 12)
[2026-03-31 00:30:43] Arguments: --nthreads 12
[2026-03-31 00:30:43] Threads: 12
[2026-03-31 00:30:43] Checking for CVMFS
[2026-03-31 00:30:43] No cvmfs_config command found, will try listing directly
[2026-03-31 00:30:43] CVMFS is ok
[2026-03-31 00:30:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-31 00:30:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-31 00:30:43] Further information can be found at the LHC@home message board.
[2026-03-31 00:30:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-31 00:30:43] Checking for apptainer binary...
[2026-03-31 00:30:43] which: no apptainer in ((null))
[2026-03-31 00:30:43] apptainer is not installed, using version from CVMFS
[2026-03-31 00:30:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-31 00:30:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot192/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-31 00:30:43] apptainer works
[2026-03-31 00:30:43] Set ATHENA_PROC_NUMBER=12
[2026-03-31 00:30:43] Set ATHENA_CORE_NUMBER=12
[2026-03-31 00:30:43] Starting ATLAS job with PandaID=7069703162
[2026-03-31 00:30:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot192/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 00:59:04]  *** The last 200 lines of the pilot log: ***
[2026-03-31 00:59:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-31 00:59:04]  is_altstaged=None
[2026-03-31 00:59:04]  is_tar=False
[2026-03-31 00:59:04]  lfn=log.49263191._002744.job.log.tgz.1
[2026-03-31 00:59:04]  mtime=0
[2026-03-31 00:59:04]  protocol_id=None
[2026-03-31 00:59:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-31 00:59:04]  replicas=None
[2026-03-31 00:59:04]  scope=mc23_13p6TeV
[2026-03-31 00:59:04]  status=None
[2026-03-31 00:59:04]  status_code=0
[2026-03-31 00:59:04]  storage_token=
[2026-03-31 00:59:04]  surl=/var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7069703162/log.49263191._002744.job.log.tgz.1
[2026-03-31 00:59:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/6d/log.49263191._002744.job.log.tgz.1
[2026-03-31 00:59:04]  workdir=None
[2026-03-31 00:59:04] ]
[2026-03-31 00:59:04] 2026-03-30 22:58:28,763 | INFO     | transferring file log.49263191._002744.job.log.tgz.1 from /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7069703162/log.49263191._002744.job.log.tgz.1 to /var/lib/
[2026-03-31 00:59:04] 2026-03-30 22:58:28,763 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7069703162/log.49263191._002744.job.log.tgz.1 /var/lib/boinc/var/slot192/slots/1/
[2026-03-31 00:59:04] 2026-03-30 22:58:28,782 | INFO     | adding to output.list: log.49263191._002744.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/6d/log.49263191._002744.job.log.tg
[2026-03-31 00:59:04] 2026-03-30 22:58:28,783 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-31 00:59:04] 2026-03-30 22:58:28,783 | INFO     | summary of transferred files:
[2026-03-31 00:59:04] 2026-03-30 22:58:28,783 | INFO     |  -- lfn=log.49263191._002744.job.log.tgz.1, status_code=0, status=transferred
[2026-03-31 00:59:04] 2026-03-30 22:58:28,783 | INFO     | stage-out finished correctly
[2026-03-31 00:59:04] 2026-03-30 22:58:29,141 | INFO     | time since job start (1655s) is within the limit (345600.0s)
[2026-03-31 00:59:04] 2026-03-30 22:58:29,620 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-31 00:59:04] 2026-03-30 22:58:30,974 | INFO     | monitor loop #128: job 0:7069703162 is in state 'finished'
[2026-03-31 00:59:04] 2026-03-30 22:58:30,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,147 | INFO     | time since job start (1657s) is within the limit (345600.0s)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,578 | INFO     | job 7069703162 has state=finished
[2026-03-31 00:59:04] 2026-03-30 22:58:31,578 | INFO     | preparing for final server update for job 7069703162 in state='finished'
[2026-03-31 00:59:04] 2026-03-30 22:58:31,578 | INFO     | reading metadata from: /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7069703162/jobReport.json
[2026-03-31 00:59:04] 2026-03-30 22:58:31,580 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot192/slots/1/workernode_map.json
[2026-03-31 00:59:04] 2026-03-30 22:58:31,581 | INFO     | this job has now completed (state=finished)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,581 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,581 | INFO     | log transfer has been attempted: DONE
[2026-03-31 00:59:04] 2026-03-30 22:58:31,581 | INFO     | job 7069703162 has finished - writing final server update
[2026-03-31 00:59:04] 2026-03-30 22:58:31,581 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_893198/.job.ad'
[2026-03-31 00:59:04] 2026-03-30 22:58:31,581 | INFO     | total number of processed events: 400 (read)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,599 | INFO     | using path: /var/lib/boinc/var/slot192/slots/1/PanDA_Pilot-7069703162/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,599 | INFO     | extracted standard info from prmon json
[2026-03-31 00:59:04] 2026-03-30 22:58:31,599 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 00:59:04] 2026-03-30 22:58:31,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-31 00:59:04] 2026-03-30 22:58:31,600 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 00:59:04] 2026-03-30 22:58:31,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 00:59:04] 2026-03-30 22:58:31,600 | INFO     | fitting pss+swap vs Time
[2026-03-31 00:59:04] 2026-03-30 22:58:31,600 | INFO     | sum of square deviations: 2474465.0
[2026-03-31 00:59:04] 2026-03-30 22:58:31,600 | INFO     | sum of deviations: 34623600.0
[2026-03-31 00:59:04] 2026-03-30 22:58:31,600 | INFO     | mean x: 1774910760.5
[2026-03-31 00:59:04] 2026-03-30 22:58:31,600 | INFO     | mean y: 2704875.2
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | intersect: -24832481804.44501
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | chi2: 3.325188039129656e-05
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | current memory leak: 13.99 B/s (using 20 data points, chi2=0.00)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | could have reported an average CPU frequency of 3605 MHz (4 samples)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | ..............................
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | . Timing measurements:
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | . get job = 0 s
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | . initial setup = 4 s
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | . payload setup = 6 s
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | . stage-in = 0 s
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | . payload execution = 1632 s
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | . stage-out = 0 s
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | . log creation = 0 s
[2026-03-31 00:59:04] 2026-03-30 22:58:31,601 | INFO     | ..............................
[2026-03-31 00:59:04] 2026-03-30 22:58:31,649 | INFO     | 
[2026-03-31 00:59:04] 2026-03-30 22:58:31,649 | INFO     | job summary report
[2026-03-31 00:59:04] 2026-03-30 22:58:31,649 | INFO     | --------------------------------------------------
[2026-03-31 00:59:04] 2026-03-30 22:58:31,649 | INFO     | PanDA job id: 7069703162
[2026-03-31 00:59:04] 2026-03-30 22:58:31,649 | INFO     | task id: 49263191
[2026-03-31 00:59:04] 2026-03-30 22:58:31,649 | INFO     | errors: (none)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | pilot state: finished 
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | transexitcode: 0
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | exeerrorcode: 0
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | exeerrordiag: 
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | exitcode: 0
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | exitmsg: OK
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | cpuconsumptiontime: 17182 s
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | nevents: 400
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | neventsw: 0
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | pid: 762734
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | pgrp: 762734
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | corecount: 12
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | event service: False
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | sizes: {0: 2280211, 11: 2280211, 1642: 2305048, 1643: 2314126, 1645: 2314264}
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | --------------------------------------------------
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | 
[2026-03-31 00:59:04] 2026-03-30 22:58:31,650 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot192/slots/1
[2026-03-31 00:59:04] 2026-03-30 22:58:31,667 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,667 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,667 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | job 7069703162 has completed (purged errors)
[2026-03-31 00:59:04] 2026-03-30 22:58:31,668 | INFO     | overall cleanup function is called
[2026-03-31 00:59:04] 2026-03-30 22:58:32,676 | INFO     | --- collectZombieJob: --- 10, [762734]
[2026-03-31 00:59:04] 2026-03-30 22:58:32,676 | INFO     | zombie collector waiting for pid 762734
[2026-03-31 00:59:04] 2026-03-30 22:58:32,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 00:59:04] 2026-03-30 22:58:32,676 | INFO     | collected zombie processes
[2026-03-31 00:59:04] 2026-03-30 22:58:32,676 | INFO     | will attempt to kill all subprocesses of pid=762734
[2026-03-31 00:59:04] 2026-03-30 22:58:33,025 | INFO     | process IDs to be killed: [762734] (in reverse order)
[2026-03-31 00:59:04] 2026-03-30 22:58:33,172 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 00:59:04] 2026-03-30 22:58:33,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 00:59:04] 2026-03-30 22:58:33,197 | INFO     | did not find any defunct processes belonging to 762734
[2026-03-31 00:59:04] 2026-03-30 22:58:33,221 | INFO     | did not find any defunct processes belonging to 762734
[2026-03-31 00:59:04] 2026-03-30 22:58:33,221 | INFO     | ready for new job
[2026-03-31 00:59:04] 2026-03-30 22:58:33,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-31 00:59:04] 2026-03-30 22:58:33,223 | INFO     | **************************************
[2026-03-31 00:59:04] 2026-03-30 22:58:33,223 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-31 00:59:04] 2026-03-30 22:58:33,223 | INFO     | **************************************
[2026-03-31 00:59:04] 2026-03-30 22:58:33,223 | INFO     | 
[2026-03-31 00:59:04] 2026-03-30 22:58:33,229 | INFO     | architecture information:
[2026-03-31 00:59:04] 2026-03-30 22:58:33,230 | INFO     | executing command: cat /etc/os-release
[2026-03-31 00:59:04] 2026-03-30 22:58:33,243 | INFO     | cat /etc/os-release:
[2026-03-31 00:59:04] NAME="CentOS Linux"
[2026-03-31 00:59:04] VERSION="7 (Core)"
[2026-03-31 00:59:04] ID="centos"
[2026-03-31 00:59:04] ID_LIKE="rhel fedora"
[2026-03-31 00:59:04] VERSION_ID="7"
[2026-03-31 00:59:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 00:59:04] ANSI_COLOR="0;31"
[2026-03-31 00:59:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 00:59:04] HOME_URL="https://www.centos.org/"
[2026-03-31 00:59:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 00:59:04] 
[2026-03-31 00:59:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 00:59:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 00:59:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 00:59:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 00:59:04] 
[2026-03-31 00:59:04] 2026-03-30 22:58:33,243 | INFO     | **************************************
[2026-03-31 00:59:04] 2026-03-30 22:58:33,747 | INFO     | executing command: df -mP /var/lib/boinc/var/slot192/slots/1
[2026-03-31 00:59:04] 2026-03-30 22:58:33,763 | INFO     | sufficient remaining disk space (174624604160 B)
[2026-03-31 00:59:04] 2026-03-30 22:58:33,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 00:59:04] 2026-03-30 22:58:33,764 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 00:59:04] 2026-03-30 22:58:33,764 | INFO     | update_server=False
[2026-03-31 00:59:04] 2026-03-30 22:58:33,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-31 00:59:04] 2026-03-30 22:58:34,059 | INFO     | all job control threads have been joined
[2026-03-31 00:59:04] 2026-03-30 22:58:34,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 00:59:04] 2026-03-30 22:58:34,469 | INFO     | all payload control threads have been joined
[2026-03-31 00:59:04] 2026-03-30 22:58:34,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 00:59:04] 2026-03-30 22:58:34,483 | INFO     | aborting loop
[2026-03-31 00:59:04] 2026-03-30 22:58:34,769 | INFO     | [job] retrieve thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:34,781 | INFO     | all data control threads have been joined
[2026-03-31 00:59:04] 2026-03-30 22:58:34,909 | INFO     | [job] validate thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:35,065 | INFO     | [job] control thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:35,087 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:35,220 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:35,221 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:35,335 | INFO     | [data] copytool_in thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:35,474 | INFO     | [payload] control thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:35,488 | INFO     | [job] job monitor thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:35,663 | INFO     | [payload] validate_post thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:35,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 00:59:04] 2026-03-30 22:58:35,786 | INFO     | [data] control thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:36,333 | INFO     | [payload] failed_post thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:36,347 | INFO     | [data] copytool_out thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:36,659 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 00:59:04] 2026-03-30 22:58:37,665 | INFO     | [job] queue monitor thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:39,677 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:44,708 | INFO     | job.realtimelogging is not enabled
[2026-03-31 00:59:04] 2026-03-30 22:58:45,713 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 00:59:04] 2026-03-30 22:58:56,894 | INFO     | [monitor] cgroup control has ended
[2026-03-31 00:59:04] 2026-03-30 22:58:57,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22970310956864)>', '<ExcThread(monitor, started 22970067322624)>']
[2026-03-31 00:59:04] 2026-03-30 22:59:02,401 | INFO     | all workflow threads have been joined
[2026-03-31 00:59:04] 2026-03-30 22:59:02,405 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 00:59:04] 2026-03-30 22:59:02,405 | INFO     | traces error code: 0
[2026-03-31 00:59:04] 2026-03-30 22:59:02,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 00:59:04] 2026-03-30 22:59:04,686 | INFO     | PID=756827 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-31 00:59:04] 2026-03-30 22:59:04,686 | INFO     | .. there are 15 such processes running
[2026-03-31 00:59:04] 2026-03-30 22:59:04,687 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 00:59:04] 2026-03-30 22:59:04,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 00:59:04] 2026-03-30 22:59:04,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 00:59:04] 2026-03-30 22:59:04,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 00:59:04] 2026-03-30 22:59:04,687 | CRITICAL | thread 'MainThread' is not alive
[2026-03-31 00:59:04] 2026-03-30 22:59:04,687 | INFO     | [monitor] control thread has ended
[2026-03-31 00:59:04] 2026-03-30 22:59:04,809 [wrapper] ==== pilot stdout END ====
[2026-03-31 00:59:04] 2026-03-30 22:59:04,812 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 00:59:04] 2026-03-30 22:59:04,814 [wrapper] pilotpid: 756827
[2026-03-31 00:59:04] 2026-03-30 22:59:04,817 [wrapper] Pilot exit status: 0
[2026-03-31 00:59:04] 2026-03-30 22:59:04,826 [wrapper] pandaids: 7069703162
[2026-03-31 00:59:04] 2026-03-30 22:59:04,929 [wrapper] cleanup supervisor_pilot  914898 756828
[2026-03-31 00:59:04] 2026-03-30 22:59:04,932 [wrapper] Test setup, not cleaning
[2026-03-31 00:59:04] 2026-03-30 22:59:04,934 [wrapper] apfmon messages muted
[2026-03-31 00:59:04] 2026-03-30 22:59:04,936 [wrapper] ==== wrapper stdout END ====
[2026-03-31 00:59:04] 2026-03-30 22:59:04,938 [wrapper] ==== wrapper stderr END ====
[2026-03-31 00:59:04]  *** Error codes and diagnostics ***
[2026-03-31 00:59:04]     "exeErrorCode": 0,
[2026-03-31 00:59:04]     "exeErrorDiag": "",
[2026-03-31 00:59:04]     "pilotErrorCode": 0,
[2026-03-31 00:59:04]     "pilotErrorDiag": "",
[2026-03-31 00:59:04]  *** Listing of results directory ***
[2026-03-31 00:59:04] total 412208
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc    585013 Mar 29 16:12 pilot3.tar.gz
[2026-03-31 00:59:04] -rwx------. 1 boinc boinc     36322 Mar 29 16:13 runpilot2-wrapper.sh
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc      5118 Mar 29 16:14 queuedata.json
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc       100 Mar 31 00:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 00:59:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar 31 00:30 run_atlas
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc       105 Mar 31 00:30 job.xml
[2026-03-31 00:59:04] -rw-r--r--. 2 boinc boinc     15845 Mar 31 00:30 start_atlas.sh
[2026-03-31 00:59:04] drwxrwx--x. 2 boinc boinc      4096 Mar 31 00:30 shared
[2026-03-31 00:59:04] -rw-r--r--. 2 boinc boinc    597536 Mar 31 00:30 input.tar.gz
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc      6711 Mar 31 00:30 init_data.xml
[2026-03-31 00:59:04] -rw-r--r--. 2 boinc boinc 222548301 Mar 31 00:30 EVNT.49263189._000110.pool.root.1
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc         0 Mar 31 00:30 boinc_lockfile
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc      2574 Mar 31 00:30 pandaJob.out
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc   1004000 Mar 31 00:30 agis_schedconf.cvmfs.json
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc   1511579 Mar 31 00:30 agis_ddmendpoints.agis.ALL.json
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc       445 Mar 31 00:30 workernode_map.json
[2026-03-31 00:59:04] drwx------. 5 boinc boinc      4096 Mar 31 00:30 pilot3
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc       529 Mar 31 00:58 boinc_task_state.xml
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc 194357956 Mar 31 00:58 HITS.49263191._002744.pool.root.1
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc      1028 Mar 31 00:58 memory_monitor_summary.json
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc        95 Mar 31 00:58 pilot_heartbeat.json
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc    350915 Mar 31 00:58 log.49263191._002744.job.log.tgz.1
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc      6359 Mar 31 00:58 heartbeat.json
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc      8192 Mar 31 00:59 boinc_mmap_file
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc        27 Mar 31 00:59 wrapper_checkpoint.txt
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc       892 Mar 31 00:59 pilotlog.txt
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc    281327 Mar 31 00:59 log.49263191._002744.job.log.1
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc       357 Mar 31 00:59 output.list
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc       620 Mar 31 00:59 runtime_log
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc    645120 Mar 31 00:59 result.tar.gz
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc      9223 Mar 31 00:59 runtime_log.err
[2026-03-31 00:59:04] -rw-------. 1 boinc boinc       657 Mar 31 00:59 2f1NDmG45Q9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmIhKKDmp27eOn.diag
[2026-03-31 00:59:04] -rw-r--r--. 1 boinc boinc     21228 Mar 31 00:59 stderr.txt
[2026-03-31 00:59:05] HITS file was successfully produced:
[2026-03-31 00:59:05] -rw-------. 1 boinc boinc 194357956 Mar 31 00:58 shared/HITS.pool.root.1
[2026-03-31 00:59:05]  *** Contents of shared directory: ***
[2026-03-31 00:59:05] total 408380
[2026-03-31 00:59:05] -rw-r--r--. 2 boinc boinc     15845 Mar 31 00:30 start_atlas.sh
[2026-03-31 00:59:05] -rw-r--r--. 2 boinc boinc    597536 Mar 31 00:30 input.tar.gz
[2026-03-31 00:59:05] -rw-r--r--. 2 boinc boinc 222548301 Mar 31 00:30 ATLAS.root_0
[2026-03-31 00:59:05] -rw-------. 1 boinc boinc 194357956 Mar 31 00:58 HITS.pool.root.1
[2026-03-31 00:59:05] -rw-------. 1 boinc boinc    645120 Mar 31 00:59 result.tar.gz
00:59:06 (752300): run_atlas exited; CPU time 17228.118221
00:59:06 (752300): called boinc_finish(0)

</stderr_txt>
]]>

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