Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:19:43 (3845449): wrapper (7.7.26015): starting
18:19:43 (3845449): wrapper: running run_atlas (--nthreads 4)
[2026-04-05 18:19:43] Arguments: --nthreads 4
[2026-04-05 18:19:43] Threads: 4
[2026-04-05 18:19:43] Checking for CVMFS
[2026-04-05 18:19:43] No cvmfs_config command found, will try listing directly
[2026-04-05 18:19:43] CVMFS is ok
[2026-04-05 18:19:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 18:19:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 18:19:43] Further information can be found at the LHC@home message board.
[2026-04-05 18:19:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 18:19:43] Checking for apptainer binary...
[2026-04-05 18:19:43] which: no apptainer in ((null))
[2026-04-05 18:19:43] apptainer is not installed, using version from CVMFS
[2026-04-05 18:19:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 18:19:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-04-05 18:19:43] apptainer works
[2026-04-05 18:19:43] Set ATHENA_PROC_NUMBER=4
[2026-04-05 18:19:43] Set ATHENA_CORE_NUMBER=4
[2026-04-05 18:19:43] Starting ATLAS job with PandaID=7069736773
[2026-04-05 18:19:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 19:50:11]  *** The last 200 lines of the pilot log: ***
[2026-04-05 19:50:11]  is_altstaged=None
[2026-04-05 19:50:11]  is_tar=False
[2026-04-05 19:50:11]  lfn=log.49263200._002060.job.log.tgz.1
[2026-04-05 19:50:11]  mtime=0
[2026-04-05 19:50:11]  protocol_id=None
[2026-04-05 19:50:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-05 19:50:11]  replicas=None
[2026-04-05 19:50:11]  scope=mc23_13p6TeV
[2026-04-05 19:50:11]  status=None
[2026-04-05 19:50:11]  status_code=0
[2026-04-05 19:50:11]  storage_token=
[2026-04-05 19:50:11]  surl=/var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7069736773/log.49263200._002060.job.log.tgz.1
[2026-04-05 19:50:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/27/log.49263200._002060.job.log.tgz.1
[2026-04-05 19:50:11]  workdir=None
[2026-04-05 19:50:11] ]
[2026-04-05 19:50:11] 2026-04-05 17:49:17,682 | INFO     | transferring file log.49263200._002060.job.log.tgz.1 from /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7069736773/log.49263200._002060.job.log.tgz.1 to /var/lib/b
[2026-04-05 19:50:11] 2026-04-05 17:49:17,682 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7069736773/log.49263200._002060.job.log.tgz.1 /var/lib/boinc/var/slot44/slots/7/lo
[2026-04-05 19:50:11] 2026-04-05 17:49:17,701 | INFO     | adding to output.list: log.49263200._002060.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/27/log.49263200._002060.job.log.tg
[2026-04-05 19:50:11] 2026-04-05 17:49:17,701 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-05 19:50:11] 2026-04-05 17:49:17,702 | INFO     | summary of transferred files:
[2026-04-05 19:50:11] 2026-04-05 17:49:17,702 | INFO     |  -- lfn=log.49263200._002060.job.log.tgz.1, status_code=0, status=transferred
[2026-04-05 19:50:11] 2026-04-05 17:49:17,702 | INFO     | stage-out finished correctly
[2026-04-05 19:50:11] 2026-04-05 17:49:17,786 | INFO     | number of running child processes to parent process 3855460: 1
[2026-04-05 19:50:11] 2026-04-05 17:49:17,786 | INFO     | maximum number of monitored processes: 6
[2026-04-05 19:50:11] 2026-04-05 17:49:18,707 | INFO     | time since job start (5359s) is within the limit (345600.0s)
[2026-04-05 19:50:11] 2026-04-05 17:49:20,289 | INFO     | monitor loop #396: job 0:7069736773 is in state 'finished'
[2026-04-05 19:50:11] 2026-04-05 17:49:20,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-05 19:50:11] 2026-04-05 17:49:20,475 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-05 19:50:11] 2026-04-05 17:49:20,713 | INFO     | time since job start (5361s) is within the limit (345600.0s)
[2026-04-05 19:50:11] 2026-04-05 17:49:21,440 | INFO     | job 7069736773 has state=finished
[2026-04-05 19:50:11] 2026-04-05 17:49:21,440 | INFO     | preparing for final server update for job 7069736773 in state='finished'
[2026-04-05 19:50:11] 2026-04-05 17:49:21,440 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7069736773/jobReport.json
[2026-04-05 19:50:11] 2026-04-05 17:49:21,442 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/7/workernode_map.json
[2026-04-05 19:50:11] 2026-04-05 17:49:21,442 | INFO     | this job has now completed (state=finished)
[2026-04-05 19:50:11] 2026-04-05 17:49:21,442 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 19:50:11] 2026-04-05 17:49:21,443 | INFO     | log transfer has been attempted: DONE
[2026-04-05 19:50:11] 2026-04-05 17:49:21,443 | INFO     | job 7069736773 has finished - writing final server update
[2026-04-05 19:50:11] 2026-04-05 17:49:21,443 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3812366/.job.ad'
[2026-04-05 19:50:11] 2026-04-05 17:49:21,443 | INFO     | total number of processed events: 400 (read)
[2026-04-05 19:50:11] 2026-04-05 17:49:21,457 | INFO     | using path: /var/lib/boinc/var/slot44/slots/7/PanDA_Pilot-7069736773/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 19:50:11] 2026-04-05 17:49:21,457 | INFO     | extracted standard info from prmon json
[2026-04-05 19:50:11] 2026-04-05 17:49:21,457 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 19:50:11] 2026-04-05 17:49:21,457 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-05 19:50:11] 2026-04-05 17:49:21,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 19:50:11] 2026-04-05 17:49:21,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 19:50:11] 2026-04-05 17:49:21,459 | INFO     | fitting pss+swap vs Time
[2026-04-05 19:50:11] 2026-04-05 17:49:21,459 | INFO     | sum of square deviations: 164765880.0
[2026-04-05 19:50:11] 2026-04-05 17:49:21,459 | INFO     | sum of deviations: -19260405838.0
[2026-04-05 19:50:11] 2026-04-05 17:49:21,459 | INFO     | mean x: 1775408770.0
[2026-04-05 19:50:11] 2026-04-05 17:49:21,459 | INFO     | mean y: 2643970.407407407
[2026-04-05 19:50:11] 2026-04-05 17:49:21,459 | INFO     | intersect: 207540111306.14706
[2026-04-05 19:50:11] 2026-04-05 17:49:21,459 | INFO     | chi2: 0.15671896879387884
[2026-04-05 19:50:11] 2026-04-05 17:49:21,459 | INFO     | current memory leak: -116.90 B/s (using 81 data points, chi2=0.16)
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | could have reported an average CPU frequency of 2763 MHz (6 samples)
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | ..............................
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | . Timing measurements:
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | . get job = 0 s
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | . initial setup = 5 s
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | . payload setup = 9 s
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | . stage-in = 0 s
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | . payload execution = 5332 s
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | . stage-out = 0 s
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | . log creation = 0 s
[2026-04-05 19:50:11] 2026-04-05 17:49:21,460 | INFO     | ..............................
[2026-04-05 19:50:11] 2026-04-05 17:49:21,511 | INFO     | 
[2026-04-05 19:50:11] 2026-04-05 17:49:21,512 | INFO     | job summary report
[2026-04-05 19:50:11] 2026-04-05 17:49:21,512 | INFO     | --------------------------------------------------
[2026-04-05 19:50:11] 2026-04-05 17:49:21,512 | INFO     | PanDA job id: 7069736773
[2026-04-05 19:50:11] 2026-04-05 17:49:21,512 | INFO     | task id: 49263200
[2026-04-05 19:50:11] 2026-04-05 17:49:21,512 | INFO     | errors: (none)
[2026-04-05 19:50:11] 2026-04-05 17:49:21,512 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 19:50:11] 2026-04-05 17:49:21,512 | INFO     | pilot state: finished 
[2026-04-05 19:50:11] 2026-04-05 17:49:21,512 | INFO     | transexitcode: 0
[2026-04-05 19:50:11] 2026-04-05 17:49:21,512 | INFO     | exeerrorcode: 0
[2026-04-05 19:50:11] 2026-04-05 17:49:21,512 | INFO     | exeerrordiag: 
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | exitcode: 0
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | exitmsg: OK
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | cpuconsumptiontime: 20432 s
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | nevents: 400
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | neventsw: 0
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | pid: 3855460
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | pgrp: 3855460
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | corecount: 4
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | event service: False
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | sizes: {0: 2280257, 11: 2280257, 5345: 2306633, 5347: 2315777, 5350: 2315833, 5351: 2316027}
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | --------------------------------------------------
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | 
[2026-04-05 19:50:11] 2026-04-05 17:49:21,513 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/7
[2026-04-05 19:50:11] 2026-04-05 17:49:21,535 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,537 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 19:50:11] 2026-04-05 17:49:21,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,537 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 19:50:11] 2026-04-05 17:49:21,537 | INFO     | job 7069736773 has completed (purged errors)
[2026-04-05 19:50:11] 2026-04-05 17:49:21,537 | INFO     | overall cleanup function is called
[2026-04-05 19:50:11] 2026-04-05 17:49:22,545 | INFO     | --- collectZombieJob: --- 10, [3855460]
[2026-04-05 19:50:11] 2026-04-05 17:49:22,545 | INFO     | zombie collector waiting for pid 3855460
[2026-04-05 19:50:11] 2026-04-05 17:49:22,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 19:50:11] 2026-04-05 17:49:22,545 | INFO     | collected zombie processes
[2026-04-05 19:50:11] 2026-04-05 17:49:22,545 | INFO     | will attempt to kill all subprocesses of pid=3855460
[2026-04-05 19:50:11] 2026-04-05 17:49:22,888 | INFO     | process IDs to be killed: [3855460] (in reverse order)
[2026-04-05 19:50:11] 2026-04-05 17:49:23,018 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 19:50:11] 2026-04-05 17:49:23,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 19:50:11] 2026-04-05 17:49:23,035 | INFO     | did not find any defunct processes belonging to 3855460
[2026-04-05 19:50:11] 2026-04-05 17:49:23,046 | INFO     | did not find any defunct processes belonging to 3855460
[2026-04-05 19:50:11] 2026-04-05 17:49:23,046 | INFO     | ready for new job
[2026-04-05 19:50:11] 2026-04-05 17:49:23,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-05 19:50:11] 2026-04-05 17:49:23,047 | INFO     | **************************************
[2026-04-05 19:50:11] 2026-04-05 17:49:23,048 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-05 19:50:11] 2026-04-05 17:49:23,048 | INFO     | **************************************
[2026-04-05 19:50:11] 2026-04-05 17:49:23,048 | INFO     | 
[2026-04-05 19:50:11] 2026-04-05 17:49:23,053 | INFO     | architecture information:
[2026-04-05 19:50:11] 2026-04-05 17:49:23,053 | INFO     | executing command: cat /etc/os-release
[2026-04-05 19:50:11] 2026-04-05 17:49:23,069 | INFO     | cat /etc/os-release:
[2026-04-05 19:50:11] NAME="CentOS Linux"
[2026-04-05 19:50:11] VERSION="7 (Core)"
[2026-04-05 19:50:11] ID="centos"
[2026-04-05 19:50:11] ID_LIKE="rhel fedora"
[2026-04-05 19:50:11] VERSION_ID="7"
[2026-04-05 19:50:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 19:50:11] ANSI_COLOR="0;31"
[2026-04-05 19:50:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 19:50:11] HOME_URL="https://www.centos.org/"
[2026-04-05 19:50:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 19:50:11] 
[2026-04-05 19:50:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 19:50:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 19:50:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 19:50:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 19:50:11] 
[2026-04-05 19:50:11] 2026-04-05 17:49:23,069 | INFO     | **************************************
[2026-04-05 19:50:11] 2026-04-05 17:49:23,572 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/7
[2026-04-05 19:50:11] 2026-04-05 17:49:23,589 | INFO     | sufficient remaining disk space (332550635520 B)
[2026-04-05 19:50:11] 2026-04-05 17:49:23,589 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 19:50:11] 2026-04-05 17:49:23,590 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 19:50:11] 2026-04-05 17:49:23,590 | INFO     | update_server=False
[2026-04-05 19:50:11] 2026-04-05 17:49:23,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-05 19:50:11] 2026-04-05 17:49:23,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 19:50:11] 2026-04-05 17:49:23,798 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 19:50:11] 2026-04-05 17:49:23,799 | INFO     | aborting loop
[2026-04-05 19:50:11] 2026-04-05 17:49:23,810 | INFO     | all payload control threads have been joined
[2026-04-05 19:50:11] 2026-04-05 17:49:24,320 | INFO     | all data control threads have been joined
[2026-04-05 19:50:11] 2026-04-05 17:49:24,595 | INFO     | [job] retrieve thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:24,598 | INFO     | [payload] failed_post thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:24,804 | INFO     | [job] job monitor thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:24,816 | INFO     | [payload] control thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:24,973 | INFO     | all job control threads have been joined
[2026-04-05 19:50:11] 2026-04-05 17:49:25,227 | INFO     | [payload] validate_post thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:25,325 | INFO     | [data] control thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:25,348 | INFO     | [job] validate thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:25,596 | INFO     | [data] copytool_out thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:25,627 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:25,659 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:25,818 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:25,978 | INFO     | [job] control thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:26,038 | INFO     | [data] copytool_in thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:26,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 19:50:11] 2026-04-05 17:49:26,537 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 19:50:11] 2026-04-05 17:49:27,528 | INFO     | [job] queue monitor thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:30,543 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:34,351 | INFO     | job.realtimelogging is not enabled
[2026-04-05 19:50:11] 2026-04-05 17:49:35,357 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 19:50:11] 2026-04-05 17:49:53,679 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-04-05 19:50:11] 2026-04-05 17:49:54,222 | INFO     | PID=3849740 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 19:50:11] 2026-04-05 17:49:54,223 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 19:50:11] 2026-04-05 17:49:54,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 19:50:11] 2026-04-05 17:49:54,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 19:50:11] 2026-04-05 17:50:05,701 | INFO     | [monitor] cgroup control has ended
[2026-04-05 19:50:11] 2026-04-05 17:50:06,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22511974934336)>', '<ExcThread(monitor, started 22511660021504)>']
[2026-04-05 19:50:11] 2026-04-05 17:50:06,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 19:50:11] 2026-04-05 17:50:06,280 | INFO     | [monitor] control thread has ended
[2026-04-05 19:50:11] 2026-04-05 17:50:11,270 | INFO     | all workflow threads have been joined
[2026-04-05 19:50:11] 2026-04-05 17:50:11,271 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 19:50:11] 2026-04-05 17:50:11,271 | INFO     | traces error code: 0
[2026-04-05 19:50:11] 2026-04-05 17:50:11,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 19:50:11] 2026-04-05 17:50:11,369 [wrapper] ==== pilot stdout END ====
[2026-04-05 19:50:11] 2026-04-05 17:50:11,371 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 19:50:11] 2026-04-05 17:50:11,373 [wrapper] pilotpid: 3849740
[2026-04-05 19:50:11] 2026-04-05 17:50:11,375 [wrapper] Pilot exit status: 0
[2026-04-05 19:50:11] 2026-04-05 17:50:11,385 [wrapper] pandaids: 7069736773
[2026-04-05 19:50:11] 2026-04-05 17:50:11,484 [wrapper] cleanup supervisor_pilot 3938493 3849741
[2026-04-05 19:50:11] 2026-04-05 17:50:11,486 [wrapper] Test setup, not cleaning
[2026-04-05 19:50:11] 2026-04-05 17:50:11,488 [wrapper] apfmon messages muted
[2026-04-05 19:50:11] 2026-04-05 17:50:11,490 [wrapper] ==== wrapper stdout END ====
[2026-04-05 19:50:11] 2026-04-05 17:50:11,492 [wrapper] ==== wrapper stderr END ====
[2026-04-05 19:50:11]  *** Error codes and diagnostics ***
[2026-04-05 19:50:11]     "exeErrorCode": 0,
[2026-04-05 19:50:11]     "exeErrorDiag": "",
[2026-04-05 19:50:11]     "pilotErrorCode": 0,
[2026-04-05 19:50:11]     "pilotErrorDiag": "",
[2026-04-05 19:50:11]  *** Listing of results directory ***
[2026-04-05 19:50:11] total 418760
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc    585013 Mar 29 19:08 pilot3.tar.gz
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc      5118 Mar 29 19:10 queuedata.json
[2026-04-05 19:50:11] -rwx------. 1 boinc boinc     36322 Mar 29 19:11 runpilot2-wrapper.sh
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc       100 Apr  5 18:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 19:50:11] -rwxr-xr-x. 1 boinc boinc      7986 Apr  5 18:19 run_atlas
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc       105 Apr  5 18:19 job.xml
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc      6623 Apr  5 18:19 init_data.xml
[2026-04-05 19:50:11] -rw-r--r--. 2 boinc boinc 224183096 Apr  5 18:19 EVNT.49263198._000083.pool.root.1
[2026-04-05 19:50:11] -rw-r--r--. 2 boinc boinc     15845 Apr  5 18:19 start_atlas.sh
[2026-04-05 19:50:11] drwxrwx--x. 2 boinc boinc      4096 Apr  5 18:19 shared
[2026-04-05 19:50:11] -rw-r--r--. 2 boinc boinc    597544 Apr  5 18:19 input.tar.gz
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc         0 Apr  5 18:19 boinc_lockfile
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc      2572 Apr  5 18:19 pandaJob.out
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc   1005088 Apr  5 18:19 agis_schedconf.cvmfs.json
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc   1511579 Apr  5 18:19 agis_ddmendpoints.agis.ALL.json
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc       443 Apr  5 18:19 workernode_map.json
[2026-04-05 19:50:11] drwx------. 5 boinc boinc      4096 Apr  5 18:19 pilot3
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc 198619107 Apr  5 19:48 HITS.49263200._002060.pool.root.1
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc       529 Apr  5 19:49 boinc_task_state.xml
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc      1026 Apr  5 19:49 memory_monitor_summary.json
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc    273691 Apr  5 19:49 log.49263200._002060.job.log.tgz.1
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc      6354 Apr  5 19:49 heartbeat.json
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc        95 Apr  5 19:49 pilot_heartbeat.json
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc      8192 Apr  5 19:50 boinc_mmap_file
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc        27 Apr  5 19:50 wrapper_checkpoint.txt
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc      4826 Apr  5 19:50 pilotlog.txt
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc    765952 Apr  5 19:50 log.49263200._002060.job.log.1
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc       357 Apr  5 19:50 output.list
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc       620 Apr  5 19:50 runtime_log
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc   1054720 Apr  5 19:50 result.tar.gz
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc      9204 Apr  5 19:50 runtime_log.err
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc       662 Apr  5 19:50 8gPNDmGr8Q9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmV8KKDmJrZLam.diag
[2026-04-05 19:50:11] -rw-r--r--. 1 boinc boinc     21312 Apr  5 19:50 stderr.txt
[2026-04-05 19:50:11] HITS file was successfully produced:
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc 198619107 Apr  5 19:48 shared/HITS.pool.root.1
[2026-04-05 19:50:11]  *** Contents of shared directory: ***
[2026-04-05 19:50:11] total 414532
[2026-04-05 19:50:11] -rw-r--r--. 2 boinc boinc 224183096 Apr  5 18:19 ATLAS.root_0
[2026-04-05 19:50:11] -rw-r--r--. 2 boinc boinc     15845 Apr  5 18:19 start_atlas.sh
[2026-04-05 19:50:11] -rw-r--r--. 2 boinc boinc    597544 Apr  5 18:19 input.tar.gz
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc 198619107 Apr  5 19:48 HITS.pool.root.1
[2026-04-05 19:50:11] -rw-------. 1 boinc boinc   1054720 Apr  5 19:50 result.tar.gz
19:50:13 (3845449): run_atlas exited; CPU time 20571.379052
19:50:13 (3845449): called boinc_finish(0)

</stderr_txt>
]]>

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