Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:45:49 (12842): wrapper (7.7.26015): starting
04:45:49 (12842): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 04:45:49] Arguments: --nthreads 8
[2026-03-30 04:45:49] Threads: 8
[2026-03-30 04:45:49] Checking for CVMFS
[2026-03-30 04:45:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 04:45:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 04:45:52] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 04:45:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 04:45:54] 2.11.2.0 4857 150033 135884 157864 2 53 20318848 25165824 4688 130560 160 45049900 99.833 33403099 1085 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-30 04:45:54] CVMFS is ok
[2026-03-30 04:45:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 04:45:54] Checking for apptainer binary...
[2026-03-30 04:45:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 04:45:54] Running /usr/bin/apptainer --version
[2026-03-30 04:45:54] apptainer version 1.3.2-1.el7
[2026-03-30 04:45:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 04:45:59] cg-vwn479.simple-grid.lan
[2026-03-30 04:45:59] apptainer works
[2026-03-30 04:45:59] Set ATHENA_PROC_NUMBER=8
[2026-03-30 04:45:59] Set ATHENA_CORE_NUMBER=8
[2026-03-30 04:45:59] Starting ATLAS job with PandaID=7069741658
[2026-03-30 04:45:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 08:56:51]  *** The last 200 lines of the pilot log: ***
[2026-03-30 08:56:51] 2026-03-30 06:55:57,580 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7069741658/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 08:56:51] 2026-03-30 06:55:57,581 | INFO     | extracted standard info from prmon json
[2026-03-30 08:56:51] 2026-03-30 06:55:57,581 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 08:56:51] 2026-03-30 06:55:57,581 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-30 08:56:51] 2026-03-30 06:55:57,582 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 08:56:51] 2026-03-30 06:55:57,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 08:56:51] 2026-03-30 06:55:57,587 | INFO     | fitting pss+swap vs Time
[2026-03-30 08:56:51] 2026-03-30 06:55:57,593 | INFO     | sum of square deviations: 4127772278.0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,595 | INFO     | sum of deviations: 146538294380.99994
[2026-03-30 08:56:51] 2026-03-30 06:55:57,595 | INFO     | mean x: 1774846540.0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,595 | INFO     | mean y: 2386507.3966244725
[2026-03-30 08:56:51] 2026-03-30 06:55:57,596 | INFO     | intersect: -63005688367.71139
[2026-03-30 08:56:51] 2026-03-30 06:55:57,596 | INFO     | chi2: 9.555743242472962
[2026-03-30 08:56:51] 2026-03-30 06:55:57,597 | INFO     | sum of square deviations: 3871990738.0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,599 | INFO     | sum of deviations: 158518567806.00003
[2026-03-30 08:56:51] 2026-03-30 06:55:57,599 | INFO     | mean x: 1774846387.5
[2026-03-30 08:56:51] 2026-03-30 06:55:57,599 | INFO     | mean y: 2393491.0603448274
[2026-03-30 08:56:51] 2026-03-30 06:55:57,599 | INFO     | intersect: -72659481616.49136
[2026-03-30 08:56:51] 2026-03-30 06:55:57,600 | INFO     | chi2: 8.873103763391338
[2026-03-30 08:56:51] 2026-03-30 06:55:57,600 | INFO     | current chi2=8.873103763391338 (change=7.143761209985813 %)
[2026-03-30 08:56:51] 2026-03-30 06:55:57,600 | INFO     | right removable region: 231
[2026-03-30 08:56:51] 2026-03-30 06:55:57,600 | INFO     | sum of square deviations: 3871990738.0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,602 | INFO     | sum of deviations: 60775136401.5
[2026-03-30 08:56:51] 2026-03-30 06:55:57,603 | INFO     | mean x: 1774846692.5
[2026-03-30 08:56:51] 2026-03-30 06:55:57,603 | INFO     | mean y: 2437645.9267241377
[2026-03-30 08:56:51] 2026-03-30 06:55:57,603 | INFO     | intersect: -27855725538.666782
[2026-03-30 08:56:51] 2026-03-30 06:55:57,603 | INFO     | chi2: 3.84244180481667
[2026-03-30 08:56:51] 2026-03-30 06:55:57,608 | INFO     | current chi2=3.84244180481667 (change=59.7891895238672 %)
[2026-03-30 08:56:51] 2026-03-30 06:55:57,608 | INFO     | sum of square deviations: 3627000098.0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,610 | INFO     | sum of deviations: -3644244859.000002
[2026-03-30 08:56:51] 2026-03-30 06:55:57,611 | INFO     | mean x: 1774846845.0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,611 | INFO     | mean y: 2477673.5506607927
[2026-03-30 08:56:51] 2026-03-30 06:55:57,611 | INFO     | intersect: 1785763120.377694
[2026-03-30 08:56:51] 2026-03-30 06:55:57,611 | INFO     | chi2: 0.8702808551224273
[2026-03-30 08:56:51] 2026-03-30 06:55:57,612 | INFO     | current chi2=0.8702808551224273 (change=77.35083836451363 %)
[2026-03-30 08:56:51] 2026-03-30 06:55:57,612 | INFO     | sum of square deviations: 3392567795.5
[2026-03-30 08:56:51] 2026-03-30 06:55:57,614 | INFO     | sum of deviations: -8713601333.5
[2026-03-30 08:56:51] 2026-03-30 06:55:57,614 | INFO     | mean x: 1774846997.5
[2026-03-30 08:56:51] 2026-03-30 06:55:57,614 | INFO     | mean y: 2480906.7522522523
[2026-03-30 08:56:51] 2026-03-30 06:55:57,614 | INFO     | intersect: 4561066054.170118
[2026-03-30 08:56:51] 2026-03-30 06:55:57,615 | INFO     | chi2: 0.8086360017246069
[2026-03-30 08:56:51] 2026-03-30 06:55:57,615 | INFO     | current chi2=0.8086360017246069 (change=7.083328678895091 %)
[2026-03-30 08:56:51] 2026-03-30 06:55:57,615 | INFO     | left removable region: 30
[2026-03-30 08:56:51] 2026-03-30 06:55:57,616 | INFO     | sum of square deviations: 2518000700.0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,617 | INFO     | sum of deviations: 4544528059.999999
[2026-03-30 08:56:51] 2026-03-30 06:55:57,617 | INFO     | mean x: 1774847272.0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,618 | INFO     | mean y: 2491452.4378109453
[2026-03-30 08:56:51] 2026-03-30 06:55:57,618 | INFO     | intersect: -3200781378.1926374
[2026-03-30 08:56:51] 2026-03-30 06:55:57,618 | INFO     | chi2: 0.0009403863677198003
[2026-03-30 08:56:51] 2026-03-30 06:55:57,618 | INFO     | current memory leak: 1.80 B/s (using 201 data points, chi2=0.00)
[2026-03-30 08:56:51] 2026-03-30 06:55:57,624 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-03-30 08:56:51] 2026-03-30 06:55:57,624 | INFO     | ..............................
[2026-03-30 08:56:51] 2026-03-30 06:55:57,625 | INFO     | . Timing measurements:
[2026-03-30 08:56:51] 2026-03-30 06:55:57,625 | INFO     | . get job = 0 s
[2026-03-30 08:56:51] 2026-03-30 06:55:57,625 | INFO     | . initial setup = 95 s
[2026-03-30 08:56:51] 2026-03-30 06:55:57,625 | INFO     | . payload setup = 135 s
[2026-03-30 08:56:51] 2026-03-30 06:55:57,625 | INFO     | . stage-in = 0 s
[2026-03-30 08:56:51] 2026-03-30 06:55:57,625 | INFO     | . payload execution = 14522 s
[2026-03-30 08:56:51] 2026-03-30 06:55:57,625 | INFO     | . stage-out = 4 s
[2026-03-30 08:56:51] 2026-03-30 06:55:57,625 | INFO     | . log creation = 1 s
[2026-03-30 08:56:51] 2026-03-30 06:55:57,625 | INFO     | ..............................
[2026-03-30 08:56:51] 2026-03-30 06:55:57,777 | INFO     | 
[2026-03-30 08:56:51] 2026-03-30 06:55:57,778 | INFO     | job summary report
[2026-03-30 08:56:51] 2026-03-30 06:55:57,778 | INFO     | --------------------------------------------------
[2026-03-30 08:56:51] 2026-03-30 06:55:57,778 | INFO     | PanDA job id: 7069741658
[2026-03-30 08:56:51] 2026-03-30 06:55:57,778 | INFO     | task id: 49263208
[2026-03-30 08:56:51] 2026-03-30 06:55:57,778 | INFO     | errors: (none)
[2026-03-30 08:56:51] 2026-03-30 06:55:57,778 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 08:56:51] 2026-03-30 06:55:57,778 | INFO     | pilot state: finished 
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | transexitcode: 0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | exeerrorcode: 0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | exeerrordiag: 
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | exitcode: 0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | exitmsg: OK
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | cpuconsumptiontime: 53991 s
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | nevents: 400
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | neventsw: 0
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | pid: 21457
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | pgrp: 21457
[2026-03-30 08:56:51] 2026-03-30 06:55:57,779 | INFO     | corecount: 8
[2026-03-30 08:56:51] 2026-03-30 06:55:57,780 | INFO     | event service: False
[2026-03-30 08:56:51] 2026-03-30 06:55:57,780 | INFO     | sizes: {0: 2279816, 1: 2280277, 12: 2280277, 14661: 2311052, 14665: 2320052, 14666: 2320430}
[2026-03-30 08:56:51] 2026-03-30 06:55:57,780 | INFO     | --------------------------------------------------
[2026-03-30 08:56:51] 2026-03-30 06:55:57,780 | INFO     | 
[2026-03-30 08:56:51] 2026-03-30 06:55:57,780 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-03-30 08:56:51] 2026-03-30 06:55:58,273 | INFO     | time since job start (14680s) is within the limit (345600.0s)
[2026-03-30 08:56:51] 2026-03-30 06:55:58,321 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,321 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,321 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,321 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,321 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,322 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,322 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,322 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,322 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,322 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,322 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,322 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,322 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,322 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,322 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,323 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,323 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,323 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 08:56:51] 2026-03-30 06:55:58,323 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,323 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 08:56:51] 2026-03-30 06:55:58,323 | INFO     | job 7069741658 has completed (purged errors)
[2026-03-30 08:56:51] 2026-03-30 06:55:58,323 | INFO     | overall cleanup function is called
[2026-03-30 08:56:51] 2026-03-30 06:55:59,340 | INFO     | --- collectZombieJob: --- 10, [21457]
[2026-03-30 08:56:51] 2026-03-30 06:55:59,341 | INFO     | zombie collector waiting for pid 21457
[2026-03-30 08:56:51] 2026-03-30 06:55:59,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 08:56:51] 2026-03-30 06:55:59,341 | INFO     | collected zombie processes
[2026-03-30 08:56:51] 2026-03-30 06:55:59,341 | INFO     | will attempt to kill all subprocesses of pid=21457
[2026-03-30 08:56:51] 2026-03-30 06:55:59,473 | INFO     | process IDs to be killed: [21457] (in reverse order)
[2026-03-30 08:56:51] 2026-03-30 06:56:00,101 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 08:56:51] 2026-03-30 06:56:00,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 08:56:51] 2026-03-30 06:56:00,105 | INFO     | did not find any defunct processes belonging to 21457
[2026-03-30 08:56:51] 2026-03-30 06:56:00,108 | INFO     | did not find any defunct processes belonging to 21457
[2026-03-30 08:56:51] 2026-03-30 06:56:00,108 | INFO     | ready for new job
[2026-03-30 08:56:51] 2026-03-30 06:56:00,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-30 08:56:51] 2026-03-30 06:56:00,111 | INFO     | **************************************
[2026-03-30 08:56:51] 2026-03-30 06:56:00,111 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-30 08:56:51] 2026-03-30 06:56:00,111 | INFO     | **************************************
[2026-03-30 08:56:51] 2026-03-30 06:56:00,111 | INFO     | 
[2026-03-30 08:56:51] 2026-03-30 06:56:00,111 | INFO     | pilot is running in a VM
[2026-03-30 08:56:51] 2026-03-30 06:56:00,112 | INFO     | architecture information:
[2026-03-30 08:56:51] 2026-03-30 06:56:00,116 | INFO     | executing command: cat /etc/os-release
[2026-03-30 08:56:51] 2026-03-30 06:56:00,292 | INFO     | cat /etc/os-release:
[2026-03-30 08:56:51] NAME="CentOS Linux"
[2026-03-30 08:56:51] VERSION="7 (Core)"
[2026-03-30 08:56:51] ID="centos"
[2026-03-30 08:56:51] ID_LIKE="rhel fedora"
[2026-03-30 08:56:51] VERSION_ID="7"
[2026-03-30 08:56:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 08:56:51] ANSI_COLOR="0;31"
[2026-03-30 08:56:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 08:56:51] HOME_URL="https://www.centos.org/"
[2026-03-30 08:56:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 08:56:51] 
[2026-03-30 08:56:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 08:56:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 08:56:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 08:56:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 08:56:51] 
[2026-03-30 08:56:51] 2026-03-30 06:56:00,292 | INFO     | **************************************
[2026-03-30 08:56:51] 2026-03-30 06:56:00,796 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-03-30 08:56:51] 2026-03-30 06:56:00,922 | INFO     | sufficient remaining disk space (496872980480 B)
[2026-03-30 08:56:51] 2026-03-30 06:56:00,923 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 08:56:51] 2026-03-30 06:56:00,923 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 08:56:51] 2026-03-30 06:56:00,923 | INFO     | update_server=False
[2026-03-30 08:56:51] 2026-03-30 06:56:00,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-30 08:56:51] 2026-03-30 06:56:00,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 08:56:51] 2026-03-30 06:56:01,255 | INFO     | all payload control threads have been joined
[2026-03-30 08:56:51] 2026-03-30 06:56:01,364 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-30 08:56:51] 2026-03-30 06:56:01,365 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-30 08:56:51] 2026-03-30 06:56:01,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 08:56:51] 2026-03-30 06:56:01,365 | INFO     | will abort loop
[2026-03-30 08:56:51] 2026-03-30 06:56:01,525 | INFO     | all data control threads have been joined
[2026-03-30 08:56:51] 2026-03-30 06:56:01,811 | INFO     | all job control threads have been joined
[2026-03-30 08:56:51] 2026-03-30 06:56:01,929 | INFO     | [job] retrieve thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:01,979 | INFO     | [payload] validate_post thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,067 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,262 | INFO     | [payload] control thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,300 | INFO     | [data] copytool_in thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,311 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,330 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,371 | INFO     | [job] job monitor thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,483 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,532 | INFO     | [data] control thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,536 | INFO     | [payload] failed_post thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,634 | INFO     | [job] validate thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 08:56:51] 2026-03-30 06:56:02,818 | INFO     | [job] control thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:02,932 | INFO     | [data] copytool_out thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:03,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 08:56:51] 2026-03-30 06:56:03,796 | INFO     | [job] queue monitor thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:07,592 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 08:56:51] 2026-03-30 06:56:31,452 | INFO     | PID=16923 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-30 08:56:51] 2026-03-30 06:56:31,452 | INFO     | .. there are 9 such processes running
[2026-03-30 08:56:51] 2026-03-30 06:56:31,453 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 08:56:51] 2026-03-30 06:56:31,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 08:56:51] 2026-03-30 06:56:31,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 08:56:51] 2026-03-30 06:56:43,360 | INFO     | [monitor] cgroup control has ended
[2026-03-30 08:56:51] 2026-03-30 06:56:43,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983896508224)>', '<ExcThread(monitor, started 139983678183168)>']
[2026-03-30 08:56:51] 2026-03-30 06:56:44,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 08:56:51] 2026-03-30 06:56:44,529 | INFO     | [monitor] control thread has ended
[2026-03-30 08:56:51] 2026-03-30 06:56:48,626 | INFO     | all workflow threads have been joined
[2026-03-30 08:56:51] 2026-03-30 06:56:48,627 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 08:56:51] 2026-03-30 06:56:48,627 | INFO     | traces error code: 0
[2026-03-30 08:56:51] 2026-03-30 06:56:48,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 08:56:51] 2026-03-30 06:56:48,856 [wrapper] ==== pilot stdout END ====
[2026-03-30 08:56:51] 2026-03-30 06:56:48,867 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 08:56:51] 2026-03-30 06:56:48,872 [wrapper] pilotpid: 16923
[2026-03-30 08:56:51] 2026-03-30 06:56:48,879 [wrapper] Pilot exit status: 0
[2026-03-30 08:56:51] 2026-03-30 06:56:48,899 [wrapper] pandaids: 7069741658
[2026-03-30 08:56:51] 2026-03-30 06:56:48,936 [wrapper] cleanup supervisor_pilot 12753 16924
[2026-03-30 08:56:51] 2026-03-30 06:56:48,940 [wrapper] Test setup, not cleaning
[2026-03-30 08:56:51] 2026-03-30 06:56:48,945 [wrapper] apfmon messages muted
[2026-03-30 08:56:51] 2026-03-30 06:56:48,948 [wrapper] ==== wrapper stdout END ====
[2026-03-30 08:56:51] 2026-03-30 06:56:48,951 [wrapper] ==== wrapper stderr END ====
[2026-03-30 08:56:51]  *** Error codes and diagnostics ***
[2026-03-30 08:56:51]     "exeErrorCode": 0,
[2026-03-30 08:56:51]     "exeErrorDiag": "",
[2026-03-30 08:56:51]     "pilotErrorCode": 0,
[2026-03-30 08:56:51]     "pilotErrorDiag": "",
[2026-03-30 08:56:52]  *** Listing of results directory ***
[2026-03-30 08:56:52] total 410716
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc    585013 Mar 29 19:08 pilot3.tar.gz
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc      5118 Mar 29 19:10 queuedata.json
[2026-03-30 08:56:52] -rwx------. 1 boinc boinc     36322 Mar 29 19:10 runpilot2-wrapper.sh
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc       100 Mar 30 04:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 08:56:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar 30 04:45 run_atlas
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc       105 Mar 30 04:45 job.xml
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc      6391 Mar 30 04:45 init_data.xml
[2026-03-30 08:56:52] -rw-r--r--. 2 boinc boinc 221766913 Mar 30 04:45 EVNT.49263206._000221.pool.root.1
[2026-03-30 08:56:52] -rw-r--r--. 2 boinc boinc     15845 Mar 30 04:45 start_atlas.sh
[2026-03-30 08:56:52] drwxrwx--x. 2 boinc boinc        68 Mar 30 04:45 shared
[2026-03-30 08:56:52] -rw-r--r--. 2 boinc boinc    597540 Mar 30 04:45 input.tar.gz
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc         0 Mar 30 04:45 boinc_lockfile
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc      2573 Mar 30 04:45 pandaJob.out
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc       415 Mar 30 04:51 workernode_map.json
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc   1004063 Mar 30 04:51 agis_schedconf.cvmfs.json
[2026-03-30 08:56:52] drwx------. 5 boinc boinc      4096 Mar 30 04:51 pilot3
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc 189814001 Mar 30 08:54 HITS.49263208._004293.pool.root.1
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc       531 Mar 30 08:54 boinc_task_state.xml
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc      1018 Mar 30 08:55 memory_monitor_summary.json
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc   1511579 Mar 30 08:55 agis_ddmendpoints.agis.ALL.json
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc    475168 Mar 30 08:55 log.49263208._004293.job.log.tgz.1
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc      6334 Mar 30 08:55 heartbeat.json
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc      8192 Mar 30 08:56 boinc_mmap_file
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc        95 Mar 30 08:56 pilot_heartbeat.json
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc        28 Mar 30 08:56 wrapper_checkpoint.txt
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc      5067 Mar 30 08:56 pilotlog.txt
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc   2058368 Mar 30 08:56 log.49263208._004293.job.log.1
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc       357 Mar 30 08:56 output.list
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc       620 Mar 30 08:56 runtime_log
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc   2549760 Mar 30 08:56 result.tar.gz
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc       655 Mar 30 08:56 WuGMDm7p8Q9n9Rq4apOajLDm4fhM0noT9bVoINGKDmiNNKDm8JXQYm.diag
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc      8832 Mar 30 08:56 runtime_log.err
[2026-03-30 08:56:52] -rw-r--r--. 1 boinc boinc     20715 Mar 30 08:56 stderr.txt
[2026-03-30 08:56:52] HITS file was successfully produced:
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc 189814001 Mar 30 08:54 shared/HITS.pool.root.1
[2026-03-30 08:56:52]  *** Contents of shared directory: ***
[2026-03-30 08:56:52] total 405032
[2026-03-30 08:56:52] -rw-r--r--. 2 boinc boinc 221766913 Mar 30 04:45 ATLAS.root_0
[2026-03-30 08:56:52] -rw-r--r--. 2 boinc boinc     15845 Mar 30 04:45 start_atlas.sh
[2026-03-30 08:56:52] -rw-r--r--. 2 boinc boinc    597540 Mar 30 04:45 input.tar.gz
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc 189814001 Mar 30 08:54 HITS.pool.root.1
[2026-03-30 08:56:52] -rw-------. 1 boinc boinc   2549760 Mar 30 08:56 result.tar.gz
08:56:53 (12842): run_atlas exited; CPU time 54209.248149
08:56:53 (12842): called boinc_finish(0)

</stderr_txt>
]]>

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