Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:55:12 (25130): wrapper (7.7.26015): starting
19:55:12 (25130): wrapper: running run_atlas (--nthreads 8)
[2026-03-29 19:55:12] Arguments: --nthreads 8
[2026-03-29 19:55:12] Threads: 8
[2026-03-29 19:55:12] Checking for CVMFS
[2026-03-29 19:55:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 19:55:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 19:55:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 19:55:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 19:55:15] 2.11.0.0 5254 243264 79052 157850 1 90 3615375 4096000 3696 130560 2 21299506 99.705 12112361 362 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-29 19:55:15] CVMFS is ok
[2026-03-29 19:55:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 19:55:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-29 19:55:15] Further information can be found at the LHC@home message board.
[2026-03-29 19:55:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 19:55:15] Checking for apptainer binary...
[2026-03-29 19:55:15] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-29 19:55:15] apptainer is not installed, using version from CVMFS
[2026-03-29 19:55:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 19:55:15] WARNING: Environment variable TMPDIR already has value [/tmp/job_11428759/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node080
[2026-03-29 19:55:15] apptainer works
[2026-03-29 19:55:15] Set ATHENA_PROC_NUMBER=8
[2026-03-29 19:55:15] Set ATHENA_CORE_NUMBER=8
[2026-03-29 19:55:15] Starting ATLAS job with PandaID=7069700191
[2026-03-29 19:55:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11428759/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 20:46:35]  *** The last 200 lines of the pilot log: ***
[2026-03-29 20:46:35]  filetype=log
[2026-03-29 20:46:35]  guid=46602cec-c4cb-4e42-86c1-81786be01c4b
[2026-03-29 20:46:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-29 20:46:35]  is_altstaged=None
[2026-03-29 20:46:35]  is_tar=False
[2026-03-29 20:46:35]  lfn=log.49263191._001910.job.log.tgz.1
[2026-03-29 20:46:35]  mtime=0
[2026-03-29 20:46:35]  protocol_id=None
[2026-03-29 20:46:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-29 20:46:35]  replicas=None
[2026-03-29 20:46:35]  scope=mc23_13p6TeV
[2026-03-29 20:46:35]  status=None
[2026-03-29 20:46:35]  status_code=0
[2026-03-29 20:46:35]  storage_token=
[2026-03-29 20:46:35]  surl=/tmp/job_11428759/atlas/pilot/slots/0/PanDA_Pilot-7069700191/log.49263191._001910.job.log.tgz.1
[2026-03-29 20:46:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/d4/log.49263191._001910.job.log.tgz.1
[2026-03-29 20:46:35]  workdir=None
[2026-03-29 20:46:35] ]
[2026-03-29 20:46:35] 2026-03-29 18:45:54,867 | INFO     | transferring file log.49263191._001910.job.log.tgz.1 from /tmp/job_11428759/atlas/pilot/slots/0/PanDA_Pilot-7069700191/log.49263191._001910.job.log.tgz.1 to /tmp/j
[2026-03-29 20:46:35] 2026-03-29 18:45:54,867 | INFO     | executing command: /usr/bin/env mv /tmp/job_11428759/atlas/pilot/slots/0/PanDA_Pilot-7069700191/log.49263191._001910.job.log.tgz.1 /tmp/job_11428759/atlas/pilot/sl
[2026-03-29 20:46:35] 2026-03-29 18:45:54,877 | INFO     | adding to output.list: log.49263191._001910.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/d4/log.49263191._001910.job.log.tg
[2026-03-29 20:46:35] 2026-03-29 18:45:54,878 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-29 20:46:35] 2026-03-29 18:45:54,878 | INFO     | summary of transferred files:
[2026-03-29 20:46:35] 2026-03-29 18:45:54,878 | INFO     |  -- lfn=log.49263191._001910.job.log.tgz.1, status_code=0, status=transferred
[2026-03-29 20:46:35] 2026-03-29 18:45:54,878 | INFO     | stage-out finished correctly
[2026-03-29 20:46:35] 2026-03-29 18:45:55,372 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-29 20:46:35] 2026-03-29 18:45:55,414 | INFO     | time since job start (3032s) is within the limit (345600.0s)
[2026-03-29 20:46:35] 2026-03-29 18:45:56,345 | INFO     | monitor loop #228: job 0:7069700191 is in state 'finished'
[2026-03-29 20:46:35] 2026-03-29 18:45:56,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,424 | INFO     | time since job start (3034s) is within the limit (345600.0s)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,688 | INFO     | job 7069700191 has state=finished
[2026-03-29 20:46:35] 2026-03-29 18:45:57,688 | INFO     | preparing for final server update for job 7069700191 in state='finished'
[2026-03-29 20:46:35] 2026-03-29 18:45:57,688 | INFO     | reading metadata from: /tmp/job_11428759/atlas/pilot/slots/0/PanDA_Pilot-7069700191/jobReport.json
[2026-03-29 20:46:35] 2026-03-29 18:45:57,690 | INFO     | added worker_node to metadata from /tmp/job_11428759/atlas/pilot/slots/0/workernode_map.json
[2026-03-29 20:46:35] 2026-03-29 18:45:57,690 | INFO     | this job has now completed (state=finished)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,690 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,690 | INFO     | log transfer has been attempted: DONE
[2026-03-29 20:46:35] 2026-03-29 18:45:57,690 | INFO     | job 7069700191 has finished - writing final server update
[2026-03-29 20:46:35] 2026-03-29 18:45:57,690 | INFO     | total number of processed events: 400 (read)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,713 | INFO     | using path: /tmp/job_11428759/atlas/pilot/slots/0/PanDA_Pilot-7069700191/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,713 | INFO     | extracted standard info from prmon json
[2026-03-29 20:46:35] 2026-03-29 18:45:57,713 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 20:46:35] 2026-03-29 18:45:57,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 20:46:35] 2026-03-29 18:45:57,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 20:46:35] 2026-03-29 18:45:57,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 20:46:35] 2026-03-29 18:45:57,714 | INFO     | fitting pss+swap vs Time
[2026-03-29 20:46:35] 2026-03-29 18:45:57,714 | INFO     | sum of square deviations: 24640462.0
[2026-03-29 20:46:35] 2026-03-29 18:45:57,714 | INFO     | sum of deviations: -1404541287.0
[2026-03-29 20:46:35] 2026-03-29 18:45:57,714 | INFO     | mean x: 1774808528.0
[2026-03-29 20:46:35] 2026-03-29 18:45:57,714 | INFO     | mean y: 2600569.511627907
[2026-03-29 20:46:35] 2026-03-29 18:45:57,714 | INFO     | intersect: 101169204267.75784
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | chi2: 0.06816472971542645
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | current memory leak: -57.00 B/s (using 43 data points, chi2=0.07)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | could have reported an average CPU frequency of 2493 MHz (5 samples)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | ..............................
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | . Timing measurements:
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | . get job = 0 s
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | . initial setup = 3 s
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | . payload setup = 4 s
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | . stage-in = 0 s
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | . payload execution = 3011 s
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | . stage-out = 0 s
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | . log creation = 0 s
[2026-03-29 20:46:35] 2026-03-29 18:45:57,715 | INFO     | ..............................
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | 
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | job summary report
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | --------------------------------------------------
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | PanDA job id: 7069700191
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | task id: 49263191
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | errors: (none)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | pilot state: finished 
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | transexitcode: 0
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | exeerrorcode: 0
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | exeerrordiag: 
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | exitcode: 0
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | exitmsg: OK
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | cpuconsumptiontime: 21425 s
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | nevents: 400
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | neventsw: 0
[2026-03-29 20:46:35] 2026-03-29 18:45:57,764 | INFO     | pid: 4012
[2026-03-29 20:46:35] 2026-03-29 18:45:57,765 | INFO     | pgrp: 4012
[2026-03-29 20:46:35] 2026-03-29 18:45:57,765 | INFO     | corecount: 8
[2026-03-29 20:46:35] 2026-03-29 18:45:57,765 | INFO     | event service: False
[2026-03-29 20:46:35] 2026-03-29 18:45:57,765 | INFO     | sizes: {0: 2280061, 1: 2280351, 11: 2280351, 3020: 2314872, 3021: 2314872, 3023: 2315098}
[2026-03-29 20:46:35] 2026-03-29 18:45:57,765 | INFO     | --------------------------------------------------
[2026-03-29 20:46:35] 2026-03-29 18:45:57,765 | INFO     | 
[2026-03-29 20:46:35] 2026-03-29 18:45:57,765 | INFO     | executing command: ls -lF /tmp/job_11428759/atlas/pilot/slots/0
[2026-03-29 20:46:35] 2026-03-29 18:45:57,777 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,777 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,777 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,777 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,777 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | job 7069700191 has completed (purged errors)
[2026-03-29 20:46:35] 2026-03-29 18:45:57,778 | INFO     | overall cleanup function is called
[2026-03-29 20:46:35] 2026-03-29 18:45:58,784 | INFO     | --- collectZombieJob: --- 10, [4012]
[2026-03-29 20:46:35] 2026-03-29 18:45:58,784 | INFO     | zombie collector waiting for pid 4012
[2026-03-29 20:46:35] 2026-03-29 18:45:58,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 20:46:35] 2026-03-29 18:45:58,784 | INFO     | collected zombie processes
[2026-03-29 20:46:35] 2026-03-29 18:45:58,784 | INFO     | will attempt to kill all subprocesses of pid=4012
[2026-03-29 20:46:35] 2026-03-29 18:45:58,950 | INFO     | process IDs to be killed: [4012] (in reverse order)
[2026-03-29 20:46:35] 2026-03-29 18:45:59,003 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 20:46:35] 2026-03-29 18:45:59,004 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 20:46:35] 2026-03-29 18:45:59,010 | INFO     | did not find any defunct processes belonging to 4012
[2026-03-29 20:46:35] 2026-03-29 18:45:59,015 | INFO     | did not find any defunct processes belonging to 4012
[2026-03-29 20:46:35] 2026-03-29 18:45:59,015 | INFO     | ready for new job
[2026-03-29 20:46:35] 2026-03-29 18:45:59,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 20:46:35] 2026-03-29 18:45:59,016 | INFO     | **************************************
[2026-03-29 20:46:35] 2026-03-29 18:45:59,016 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 20:46:35] 2026-03-29 18:45:59,016 | INFO     | **************************************
[2026-03-29 20:46:35] 2026-03-29 18:45:59,016 | INFO     | 
[2026-03-29 20:46:35] 2026-03-29 18:45:59,032 | INFO     | architecture information:
[2026-03-29 20:46:35] 2026-03-29 18:45:59,032 | INFO     | executing command: cat /etc/os-release
[2026-03-29 20:46:35] 2026-03-29 18:45:59,040 | INFO     | cat /etc/os-release:
[2026-03-29 20:46:35] NAME="CentOS Linux"
[2026-03-29 20:46:35] VERSION="7 (Core)"
[2026-03-29 20:46:35] ID="centos"
[2026-03-29 20:46:35] ID_LIKE="rhel fedora"
[2026-03-29 20:46:35] VERSION_ID="7"
[2026-03-29 20:46:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 20:46:35] ANSI_COLOR="0;31"
[2026-03-29 20:46:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 20:46:35] HOME_URL="https://www.centos.org/"
[2026-03-29 20:46:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 20:46:35] 
[2026-03-29 20:46:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 20:46:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 20:46:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 20:46:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 20:46:35] 
[2026-03-29 20:46:35] 2026-03-29 18:45:59,040 | INFO     | **************************************
[2026-03-29 20:46:35] 2026-03-29 18:45:59,543 | INFO     | executing command: df -mP /tmp/job_11428759/atlas/pilot/slots/0
[2026-03-29 20:46:35] 2026-03-29 18:45:59,551 | INFO     | sufficient remaining disk space (224151994368 B)
[2026-03-29 20:46:35] 2026-03-29 18:45:59,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 20:46:35] 2026-03-29 18:45:59,551 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 20:46:35] 2026-03-29 18:45:59,551 | INFO     | update_server=False
[2026-03-29 20:46:35] 2026-03-29 18:45:59,551 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 20:46:35] 2026-03-29 18:45:59,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 20:46:35] 2026-03-29 18:45:59,763 | INFO     | all payload control threads have been joined
[2026-03-29 20:46:35] 2026-03-29 18:45:59,812 | INFO     | all data control threads have been joined
[2026-03-29 20:46:35] 2026-03-29 18:45:59,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 20:46:35] 2026-03-29 18:45:59,853 | INFO     | aborting loop
[2026-03-29 20:46:35] 2026-03-29 18:46:00,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 20:46:35] 2026-03-29 18:46:00,556 | INFO     | [job] retrieve thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:00,556 | INFO     | [job] queue monitor thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:00,745 | INFO     | [payload] failed_post thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:00,768 | INFO     | [payload] control thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:00,815 | INFO     | [job] validate thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:00,817 | INFO     | [data] control thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:00,858 | INFO     | [job] job monitor thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:01,011 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:01,072 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:01,180 | INFO     | all job control threads have been joined
[2026-03-29 20:46:35] 2026-03-29 18:46:01,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 20:46:35] 2026-03-29 18:46:01,439 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:01,449 | INFO     | [data] copytool_in thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:01,892 | INFO     | [payload] validate_post thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:02,186 | INFO     | [job] control thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:02,443 | INFO     | [data] copytool_out thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:05,429 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:10,182 | INFO     | job.realtimelogging is not enabled
[2026-03-29 20:46:35] 2026-03-29 18:46:11,187 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 20:46:35] 2026-03-29 18:46:28,329 | INFO     | [monitor] cgroup control has ended
[2026-03-29 20:46:35] 2026-03-29 18:46:30,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-29 20:46:35] 2026-03-29 18:46:30,697 | INFO     | PID=30072 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-29 20:46:35] 2026-03-29 18:46:30,697 | INFO     | .. there are 3 such processes running
[2026-03-29 20:46:35] 2026-03-29 18:46:30,698 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 20:46:35] 2026-03-29 18:46:30,698 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 20:46:35] 2026-03-29 18:46:30,698 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 20:46:35] 2026-03-29 18:46:30,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 20:46:35] 2026-03-29 18:46:30,698 | INFO     | [monitor] control thread has ended
[2026-03-29 20:46:35] 2026-03-29 18:46:35,320 | INFO     | all workflow threads have been joined
[2026-03-29 20:46:35] 2026-03-29 18:46:35,320 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 20:46:35] 2026-03-29 18:46:35,320 | INFO     | traces error code: 0
[2026-03-29 20:46:35] 2026-03-29 18:46:35,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 20:46:35] 2026-03-29 18:46:35,379 [wrapper] ==== pilot stdout END ====
[2026-03-29 20:46:35] 2026-03-29 18:46:35,381 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 20:46:35] 2026-03-29 18:46:35,382 [wrapper] pilotpid: 30072
[2026-03-29 20:46:35] 2026-03-29 18:46:35,383 [wrapper] Pilot exit status: 0
[2026-03-29 20:46:35] 2026-03-29 18:46:35,389 [wrapper] pandaids: 7069700191
[2026-03-29 20:46:35] 2026-03-29 18:46:35,427 [wrapper] cleanup supervisor_pilot 23148 30073
[2026-03-29 20:46:35] 2026-03-29 18:46:35,428 [wrapper] Test setup, not cleaning
[2026-03-29 20:46:35] 2026-03-29 18:46:35,430 [wrapper] apfmon messages muted
[2026-03-29 20:46:35] 2026-03-29 18:46:35,431 [wrapper] ==== wrapper stdout END ====
[2026-03-29 20:46:35] 2026-03-29 18:46:35,432 [wrapper] ==== wrapper stderr END ====
[2026-03-29 20:46:35]  *** Error codes and diagnostics ***
[2026-03-29 20:46:35]     "exeErrorCode": 0,
[2026-03-29 20:46:35]     "exeErrorDiag": "",
[2026-03-29 20:46:35]     "pilotErrorCode": 0,
[2026-03-29 20:46:35]     "pilotErrorDiag": "",
[2026-03-29 20:46:35]  *** Listing of results directory ***
[2026-03-29 20:46:35] total 418696
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user    585013 Mar 29 14:32 pilot3.tar.gz
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user      5118 Mar 29 14:32 queuedata.json
[2026-03-29 20:46:35] -rwx------ 1 mf493845 unix-user     36322 Mar 29 14:33 runpilot2-wrapper.sh
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user       100 Mar 29 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 20:46:35] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 29 18:58 run_atlas
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user       105 Mar 29 18:58 job.xml
[2026-03-29 20:46:35] -rw-r--r-- 2 mf493845 unix-user 223223305 Mar 29 19:55 EVNT.49263189._000077.pool.root.1
[2026-03-29 20:46:35] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 29 19:55 start_atlas.sh
[2026-03-29 20:46:35] drwxrwx--x 2 mf493845 unix-user       100 Mar 29 19:55 shared
[2026-03-29 20:46:35] -rw-r--r-- 2 mf493845 unix-user    597532 Mar 29 19:55 input.tar.gz
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user      6389 Mar 29 19:55 init_data.xml
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user         0 Mar 29 19:55 boinc_setup_complete
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user      8192 Mar 29 19:55 boinc_mmap_file
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user         0 Mar 29 19:55 boinc_lockfile
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user      2573 Mar 29 19:55 pandaJob.out
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user   1003389 Mar 29 19:55 agis_schedconf.cvmfs.json
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user   1511579 Mar 29 19:55 agis_ddmendpoints.agis.ALL.json
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user       418 Mar 29 19:55 workernode_map.json
[2026-03-29 20:46:35] drwx------ 5 mf493845 unix-user       440 Mar 29 19:55 pilot3
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user 200075320 Mar 29 20:45 HITS.49263191._001910.pool.root.1
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user      1033 Mar 29 20:45 memory_monitor_summary.json
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user    296826 Mar 29 20:45 log.49263191._001910.job.log.tgz.1
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user      6320 Mar 29 20:45 heartbeat.json
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user        95 Mar 29 20:46 pilot_heartbeat.json
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user      4903 Mar 29 20:46 pilotlog.txt
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user    473854 Mar 29 20:46 log.49263191._001910.job.log.1
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user       357 Mar 29 20:46 output.list
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user       620 Mar 29 20:46 runtime_log
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user    788480 Mar 29 20:46 result.tar.gz
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user      9219 Mar 29 20:46 runtime_log.err
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user       643 Mar 29 20:46 ielKDmnV4Q9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmnWKKDmNjZ6Hm.diag
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user     21760 Mar 29 20:46 stderr.txt
[2026-03-29 20:46:35] HITS file was successfully produced:
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user 200075320 Mar 29 20:45 shared/HITS.pool.root.1
[2026-03-29 20:46:35]  *** Contents of shared directory: ***
[2026-03-29 20:46:35] total 414752
[2026-03-29 20:46:35] -rw-r--r-- 2 mf493845 unix-user 223223305 Mar 29 19:55 ATLAS.root_0
[2026-03-29 20:46:35] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 29 19:55 start_atlas.sh
[2026-03-29 20:46:35] -rw-r--r-- 2 mf493845 unix-user    597532 Mar 29 19:55 input.tar.gz
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user 200075320 Mar 29 20:45 HITS.pool.root.1
[2026-03-29 20:46:35] -rw------- 1 mf493845 unix-user    788480 Mar 29 20:46 result.tar.gz
20:46:36 (25130): run_atlas exited; CPU time 21484.528672
20:46:36 (25130): called boinc_finish(0)

</stderr_txt>
]]>

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