Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:00:26 (3631674): wrapper (7.7.26015): starting
15:00:26 (3631674): wrapper: running run_atlas (--nthreads 8)
[2026-03-29 15:00:26] Arguments: --nthreads 8
[2026-03-29 15:00:26] Threads: 8
[2026-03-29 15:00:26] Checking for CVMFS
[2026-03-29 15:00:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 15:00:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 15:00:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 15:00:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 15:00:26] 2.13.3.0 779065 131080 119448 157852 2 50 37590237 39288832 1832 16776704 0 148031940 99.987 5499139 22391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-29 15:00:26] CVMFS is ok
[2026-03-29 15:00:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 15:00:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-29 15:00:26] Further information can be found at the LHC@home message board.
[2026-03-29 15:00:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 15:00:26] Checking for apptainer binary...
[2026-03-29 15:00:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-29 15:00:26] Running /usr/bin/apptainer --version
[2026-03-29 15:00:26] apptainer version 1.4.5-2.el9
[2026-03-29 15:00:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 15:00:26] c-210-16.aglt2.org
[2026-03-29 15:00:26] apptainer works
[2026-03-29 15:00:26] Set ATHENA_PROC_NUMBER=8
[2026-03-29 15:00:26] Set ATHENA_CORE_NUMBER=8
[2026-03-29 15:00:26] Starting ATLAS job with PandaID=7069725558
[2026-03-29 15:00:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 16:41:53]  *** The last 200 lines of the pilot log: ***
[2026-03-29 16:41:53]  filesize=357308
[2026-03-29 16:41:53]  filetype=log
[2026-03-29 16:41:53]  guid=8c00e441-1ba6-444f-86b3-b1b0a96e3823
[2026-03-29 16:41:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-29 16:41:53]  is_altstaged=None
[2026-03-29 16:41:53]  is_tar=False
[2026-03-29 16:41:53]  lfn=log.49263208._003146.job.log.tgz.1
[2026-03-29 16:41:53]  mtime=0
[2026-03-29 16:41:53]  protocol_id=None
[2026-03-29 16:41:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-29 16:41:53]  replicas=None
[2026-03-29 16:41:53]  scope=mc23_13p6TeV
[2026-03-29 16:41:53]  status=None
[2026-03-29 16:41:53]  status_code=0
[2026-03-29 16:41:53]  storage_token=
[2026-03-29 16:41:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7069725558/log.49263208._003146.job.log.tgz.1
[2026-03-29 16:41:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/60/log.49263208._003146.job.log.tgz.1
[2026-03-29 16:41:53]  workdir=None
[2026-03-29 16:41:53] ]
[2026-03-29 16:41:53] 2026-03-29 20:41:01,920 | INFO     | transferring file log.49263208._003146.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7069725558/log.49263208._003146.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-29 16:41:53] 2026-03-29 20:41:01,920 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7069725558/log.49263208._003146.job.log.tgz.1 /tmp/boinchome/slots/0/log.49263208._003146.job
[2026-03-29 16:41:53] 2026-03-29 20:41:01,935 | INFO     | adding to output.list: log.49263208._003146.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/60/log.49263208._003146.job.log.tg
[2026-03-29 16:41:53] 2026-03-29 20:41:01,936 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-29 16:41:53] 2026-03-29 20:41:01,936 | INFO     | summary of transferred files:
[2026-03-29 16:41:53] 2026-03-29 20:41:01,936 | INFO     |  -- lfn=log.49263208._003146.job.log.tgz.1, status_code=0, status=transferred
[2026-03-29 16:41:53] 2026-03-29 20:41:01,937 | INFO     | stage-out finished correctly
[2026-03-29 16:41:53] 2026-03-29 20:41:02,038 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-29 16:41:53] 2026-03-29 20:41:02,135 | INFO     | job 7069725558 has state=finished
[2026-03-29 16:41:53] 2026-03-29 20:41:02,135 | INFO     | preparing for final server update for job 7069725558 in state='finished'
[2026-03-29 16:41:53] 2026-03-29 20:41:02,208 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,208 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7069725558/jobReport.json
[2026-03-29 16:41:53] 2026-03-29 20:41:02,211 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-29 16:41:53] 2026-03-29 20:41:02,211 | INFO     | this job has now completed (state=finished)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,211 | INFO     | log transfer has been attempted: DONE
[2026-03-29 16:41:53] 2026-03-29 20:41:02,211 | INFO     | job 7069725558 has finished - writing final server update
[2026-03-29 16:41:53] 2026-03-29 20:41:02,212 | INFO     | total number of processed events: 400 (read)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,218 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7069725558/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,219 | INFO     | extracted standard info from prmon json
[2026-03-29 16:41:53] 2026-03-29 20:41:02,219 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 16:41:53] 2026-03-29 20:41:02,219 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 16:41:53] 2026-03-29 20:41:02,219 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 16:41:53] 2026-03-29 20:41:02,220 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 16:41:53] 2026-03-29 20:41:02,222 | INFO     | fitting pss+swap vs Time
[2026-03-29 16:41:53] 2026-03-29 20:41:02,222 | INFO     | sum of square deviations: 241429643.0
[2026-03-29 16:41:53] 2026-03-29 20:41:02,223 | INFO     | sum of deviations: -1142292588.0
[2026-03-29 16:41:53] 2026-03-29 20:41:02,223 | INFO     | mean x: 1774813938.5
[2026-03-29 16:41:53] 2026-03-29 20:41:02,223 | INFO     | mean y: 2527667.0217391304
[2026-03-29 16:41:53] 2026-03-29 20:41:02,223 | INFO     | intersect: 8399826283.031529
[2026-03-29 16:41:53] 2026-03-29 20:41:02,223 | INFO     | chi2: 0.012435403746145011
[2026-03-29 16:41:53] 2026-03-29 20:41:02,224 | INFO     | current memory leak: -4.73 B/s (using 92 data points, chi2=0.01)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,224 | INFO     | could have reported an average CPU frequency of 2739 MHz (7 samples)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,224 | INFO     | ..............................
[2026-03-29 16:41:53] 2026-03-29 20:41:02,224 | INFO     | . Timing measurements:
[2026-03-29 16:41:53] 2026-03-29 20:41:02,224 | INFO     | . get job = 0 s
[2026-03-29 16:41:53] 2026-03-29 20:41:02,224 | INFO     | . initial setup = 4 s
[2026-03-29 16:41:53] 2026-03-29 20:41:02,225 | INFO     | . payload setup = 6 s
[2026-03-29 16:41:53] 2026-03-29 20:41:02,225 | INFO     | . stage-in = 0 s
[2026-03-29 16:41:53] 2026-03-29 20:41:02,225 | INFO     | . payload execution = 6001 s
[2026-03-29 16:41:53] 2026-03-29 20:41:02,225 | INFO     | . stage-out = 0 s
[2026-03-29 16:41:53] 2026-03-29 20:41:02,225 | INFO     | . log creation = 0 s
[2026-03-29 16:41:53] 2026-03-29 20:41:02,225 | INFO     | ..............................
[2026-03-29 16:41:53] 2026-03-29 20:41:02,250 | INFO     | time since job start (6025s) is within the limit (345600.0s)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,323 | INFO     | 
[2026-03-29 16:41:53] 2026-03-29 20:41:02,323 | INFO     | job summary report
[2026-03-29 16:41:53] 2026-03-29 20:41:02,323 | INFO     | --------------------------------------------------
[2026-03-29 16:41:53] 2026-03-29 20:41:02,323 | INFO     | PanDA job id: 7069725558
[2026-03-29 16:41:53] 2026-03-29 20:41:02,324 | INFO     | task id: 49263208
[2026-03-29 16:41:53] 2026-03-29 20:41:02,324 | INFO     | errors: (none)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,324 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 16:41:53] 2026-03-29 20:41:02,324 | INFO     | pilot state: finished 
[2026-03-29 16:41:53] 2026-03-29 20:41:02,324 | INFO     | transexitcode: 0
[2026-03-29 16:41:53] 2026-03-29 20:41:02,324 | INFO     | exeerrorcode: 0
[2026-03-29 16:41:53] 2026-03-29 20:41:02,324 | INFO     | exeerrordiag: 
[2026-03-29 16:41:53] 2026-03-29 20:41:02,324 | INFO     | exitcode: 0
[2026-03-29 16:41:53] 2026-03-29 20:41:02,324 | INFO     | exitmsg: OK
[2026-03-29 16:41:53] 2026-03-29 20:41:02,325 | INFO     | cpuconsumptiontime: 44034 s
[2026-03-29 16:41:53] 2026-03-29 20:41:02,325 | INFO     | nevents: 400
[2026-03-29 16:41:53] 2026-03-29 20:41:02,325 | INFO     | neventsw: 0
[2026-03-29 16:41:53] 2026-03-29 20:41:02,325 | INFO     | pid: 3647097
[2026-03-29 16:41:53] 2026-03-29 20:41:02,325 | INFO     | pgrp: 3647097
[2026-03-29 16:41:53] 2026-03-29 20:41:02,325 | INFO     | corecount: 8
[2026-03-29 16:41:53] 2026-03-29 20:41:02,325 | INFO     | event service: False
[2026-03-29 16:41:53] 2026-03-29 20:41:02,325 | INFO     | sizes: {0: 2279872, 1: 2280276, 11: 2280276, 6011: 2307094, 6013: 2316148, 6014: 2316286}
[2026-03-29 16:41:53] 2026-03-29 20:41:02,325 | INFO     | --------------------------------------------------
[2026-03-29 16:41:53] 2026-03-29 20:41:02,325 | INFO     | 
[2026-03-29 16:41:53] 2026-03-29 20:41:02,326 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-29 16:41:53] 2026-03-29 20:41:02,341 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,342 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,342 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,342 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,344 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,344 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 16:41:53] 2026-03-29 20:41:02,344 | INFO     | job 7069725558 has completed (purged errors)
[2026-03-29 16:41:53] 2026-03-29 20:41:02,344 | INFO     | overall cleanup function is called
[2026-03-29 16:41:53] 2026-03-29 20:41:03,353 | INFO     | --- collectZombieJob: --- 10, [3647097]
[2026-03-29 16:41:53] 2026-03-29 20:41:03,353 | INFO     | zombie collector waiting for pid 3647097
[2026-03-29 16:41:53] 2026-03-29 20:41:03,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 16:41:53] 2026-03-29 20:41:03,353 | INFO     | collected zombie processes
[2026-03-29 16:41:53] 2026-03-29 20:41:03,354 | INFO     | will attempt to kill all subprocesses of pid=3647097
[2026-03-29 16:41:53] 2026-03-29 20:41:03,696 | INFO     | PID=3635386 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-29 16:41:53] 2026-03-29 20:41:03,697 | INFO     | .. there are 4 such processes running
[2026-03-29 16:41:53] 2026-03-29 20:41:03,743 | INFO     | process IDs to be killed: [3647097] (in reverse order)
[2026-03-29 16:41:53] 2026-03-29 20:41:03,801 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 16:41:53] 2026-03-29 20:41:03,802 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 16:41:53] 2026-03-29 20:41:03,808 | INFO     | did not find any defunct processes belonging to 3647097
[2026-03-29 16:41:53] 2026-03-29 20:41:03,813 | INFO     | did not find any defunct processes belonging to 3647097
[2026-03-29 16:41:53] 2026-03-29 20:41:03,813 | INFO     | ready for new job
[2026-03-29 16:41:53] 2026-03-29 20:41:03,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 16:41:53] 2026-03-29 20:41:03,815 | INFO     | **************************************
[2026-03-29 16:41:53] 2026-03-29 20:41:03,815 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 16:41:53] 2026-03-29 20:41:03,815 | INFO     | **************************************
[2026-03-29 16:41:53] 2026-03-29 20:41:03,815 | INFO     | 
[2026-03-29 16:41:53] 2026-03-29 20:41:03,817 | INFO     | architecture information:
[2026-03-29 16:41:53] 2026-03-29 20:41:03,818 | INFO     | executing command: cat /etc/os-release
[2026-03-29 16:41:53] 2026-03-29 20:41:03,829 | INFO     | cat /etc/os-release:
[2026-03-29 16:41:53] NAME="CentOS Linux"
[2026-03-29 16:41:53] VERSION="7 (Core)"
[2026-03-29 16:41:53] ID="centos"
[2026-03-29 16:41:53] ID_LIKE="rhel fedora"
[2026-03-29 16:41:53] VERSION_ID="7"
[2026-03-29 16:41:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 16:41:53] ANSI_COLOR="0;31"
[2026-03-29 16:41:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 16:41:53] HOME_URL="https://www.centos.org/"
[2026-03-29 16:41:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 16:41:53] 
[2026-03-29 16:41:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 16:41:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 16:41:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 16:41:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 16:41:53] 
[2026-03-29 16:41:53] 2026-03-29 20:41:03,829 | INFO     | **************************************
[2026-03-29 16:41:53] 2026-03-29 20:41:04,332 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-29 16:41:53] 2026-03-29 20:41:04,344 | INFO     | sufficient remaining disk space (52064944128 B)
[2026-03-29 16:41:53] 2026-03-29 20:41:04,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 16:41:53] 2026-03-29 20:41:04,345 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 16:41:53] 2026-03-29 20:41:04,345 | INFO     | update_server=False
[2026-03-29 16:41:53] 2026-03-29 20:41:04,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 16:41:53] 2026-03-29 20:41:04,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 16:41:53] 2026-03-29 20:41:04,345 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-29 16:41:53] 2026-03-29 20:41:04,346 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 16:41:53] 2026-03-29 20:41:04,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 16:41:53] 2026-03-29 20:41:04,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 16:41:53] 2026-03-29 20:41:04,554 | INFO     | all job control threads have been joined
[2026-03-29 16:41:53] 2026-03-29 20:41:04,711 | INFO     | all data control threads have been joined
[2026-03-29 16:41:53] 2026-03-29 20:41:04,815 | INFO     | all payload control threads have been joined
[2026-03-29 16:41:53] 2026-03-29 20:41:04,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 16:41:53] 2026-03-29 20:41:04,982 | INFO     | aborting loop
[2026-03-29 16:41:53] 2026-03-29 20:41:05,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 16:41:53] 2026-03-29 20:41:05,351 | INFO     | [job] retrieve thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:05,540 | INFO     | [payload] failed_post thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:05,547 | INFO     | [payload] validate_post thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:05,547 | INFO     | job.realtimelogging is not enabled
[2026-03-29 16:41:53] 2026-03-29 20:41:05,560 | INFO     | [job] control thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:05,613 | INFO     | [data] copytool_in thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:05,709 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:05,712 | INFO     | [data] control thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:05,792 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:05,821 | INFO     | [payload] control thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:05,987 | INFO     | [job] job monitor thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:06,553 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:06,662 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:06,784 | INFO     | [job] validate thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:07,049 | INFO     | [data] copytool_out thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:07,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 16:41:53] 2026-03-29 20:41:08,339 | INFO     | [job] queue monitor thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:08,351 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 16:41:53] 2026-03-29 20:41:46,978 | INFO     | [monitor] cgroup control has ended
[2026-03-29 16:41:53] 2026-03-29 20:41:47,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555680302912)>', '<ExcThread(monitor, started 140555312932608)>']
[2026-03-29 16:41:53] 2026-03-29 20:41:48,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 16:41:53] 2026-03-29 20:41:48,555 | INFO     | [monitor] control thread has ended
[2026-03-29 16:41:53] 2026-03-29 20:41:52,838 | INFO     | all workflow threads have been joined
[2026-03-29 16:41:53] 2026-03-29 20:41:52,838 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 16:41:53] 2026-03-29 20:41:52,838 | INFO     | traces error code: 0
[2026-03-29 16:41:53] 2026-03-29 20:41:52,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 16:41:53] 2026-03-29 20:41:52,941 [wrapper] ==== pilot stdout END ====
[2026-03-29 16:41:53] 2026-03-29 20:41:52,944 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 16:41:53] 2026-03-29 20:41:52,946 [wrapper] pilotpid: 3635386
[2026-03-29 16:41:53] 2026-03-29 20:41:52,949 [wrapper] Pilot exit status: 0
[2026-03-29 16:41:53] 2026-03-29 20:41:52,957 [wrapper] pandaids: 7069725558
[2026-03-29 16:41:53] 2026-03-29 20:41:53,000 [wrapper] cleanup supervisor_pilot 3810402 3635387
[2026-03-29 16:41:53] 2026-03-29 20:41:53,003 [wrapper] Test setup, not cleaning
[2026-03-29 16:41:53] 2026-03-29 20:41:53,005 [wrapper] apfmon messages muted
[2026-03-29 16:41:53] 2026-03-29 20:41:53,008 [wrapper] ==== wrapper stdout END ====
[2026-03-29 16:41:53] 2026-03-29 20:41:53,010 [wrapper] ==== wrapper stderr END ====
[2026-03-29 16:41:53]  *** Error codes and diagnostics ***
[2026-03-29 16:41:53]     "exeErrorCode": 0,
[2026-03-29 16:41:53]     "exeErrorDiag": "",
[2026-03-29 16:41:53]     "pilotErrorCode": 0,
[2026-03-29 16:41:53]     "pilotErrorDiag": "",
[2026-03-29 16:41:53]  *** Listing of results directory ***
[2026-03-29 16:41:53] total 414100
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas    585013 Mar 29 11:34 pilot3.tar.gz
[2026-03-29 16:41:53] -rwx------. 1 boincer umatlas     36322 Mar 29 11:37 runpilot2-wrapper.sh
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas      5118 Mar 29 11:40 queuedata.json
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas       100 Mar 29 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 16:41:53] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 29 15:00 run_atlas
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas       105 Mar 29 15:00 job.xml
[2026-03-29 16:41:53] -rw-r--r--. 2 boincer umatlas 222527684 Mar 29 15:00 EVNT.49263206._000175.pool.root.1
[2026-03-29 16:41:53] -rw-r--r--. 2 boincer umatlas     15845 Mar 29 15:00 start_atlas.sh
[2026-03-29 16:41:53] drwxrwx--x. 2 boincer umatlas      4096 Mar 29 15:00 shared
[2026-03-29 16:41:53] -rw-r--r--. 2 boincer umatlas    597539 Mar 29 15:00 input.tar.gz
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas         0 Mar 29 15:00 boinc_lockfile
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas      2573 Mar 29 15:00 pandaJob.out
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas        57 Mar 29 15:00 setup.sh.local
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas   1004063 Mar 29 15:00 agis_schedconf.cvmfs.json
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas   1511579 Mar 29 15:00 agis_ddmendpoints.agis.ALL.json
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas       442 Mar 29 15:00 workernode_map.json
[2026-03-29 16:41:53] drwx------. 5 boincer umatlas      4096 Mar 29 15:00 pilot3
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas        95 Mar 29 16:40 pilot_heartbeat.json
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas 195100743 Mar 29 16:40 HITS.49263208._003146.pool.root.1
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas       529 Mar 29 16:40 boinc_task_state.xml
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas      6663 Mar 29 16:40 init_data.xml
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas      1033 Mar 29 16:40 memory_monitor_summary.json
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas    357308 Mar 29 16:41 log.49263208._003146.job.log.tgz.1
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas      6377 Mar 29 16:41 heartbeat.json
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas      8192 Mar 29 16:41 boinc_mmap_file
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas        27 Mar 29 16:41 wrapper_checkpoint.txt
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas      4620 Mar 29 16:41 pilotlog.txt
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas    875413 Mar 29 16:41 log.49263208._003146.job.log.1
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas       357 Mar 29 16:41 output.list
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas       620 Mar 29 16:41 runtime_log
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas   1249280 Mar 29 16:41 result.tar.gz
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas      9341 Mar 29 16:41 runtime_log.err
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas       652 Mar 29 16:41 j56NDmDO7Q9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmexKKDmxowiem.diag
[2026-03-29 16:41:53] -rw-r--r--. 1 boincer umatlas     21192 Mar 29 16:41 stderr.txt
[2026-03-29 16:41:53] HITS file was successfully produced:
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas 195100743 Mar 29 16:40 shared/HITS.pool.root.1
[2026-03-29 16:41:53]  *** Contents of shared directory: ***
[2026-03-29 16:41:53] total 409676
[2026-03-29 16:41:53] -rw-r--r--. 2 boincer umatlas 222527684 Mar 29 15:00 ATLAS.root_0
[2026-03-29 16:41:53] -rw-r--r--. 2 boincer umatlas     15845 Mar 29 15:00 start_atlas.sh
[2026-03-29 16:41:53] -rw-r--r--. 2 boincer umatlas    597539 Mar 29 15:00 input.tar.gz
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas 195100743 Mar 29 16:40 HITS.pool.root.1
[2026-03-29 16:41:53] -rw-------. 1 boincer umatlas   1249280 Mar 29 16:41 result.tar.gz
16:41:54 (3631674): run_atlas exited; CPU time 44166.616762
16:41:54 (3631674): called boinc_finish(0)

</stderr_txt>
]]>

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