Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:18:41 (3268920): wrapper (7.7.26015): starting
11:18:41 (3268920): wrapper: running run_atlas (--nthreads 8)
[2026-03-29 11:18:41] Arguments: --nthreads 8
[2026-03-29 11:18:41] Threads: 8
[2026-03-29 11:18:41] Checking for CVMFS
[2026-03-29 11:18:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 11:18:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 11:18:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 11:18:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 11:18:41] 2.13.3.0 779065 130858 121092 157847 3 181 37533005 39288833 3014 16776704 0 147581838 99.987 5492410 22380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-29 11:18:41] CVMFS is ok
[2026-03-29 11:18:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 11:18:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-29 11:18:41] Further information can be found at the LHC@home message board.
[2026-03-29 11:18:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 11:18:41] Checking for apptainer binary...
[2026-03-29 11:18:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-29 11:18:41] Running /usr/bin/apptainer --version
[2026-03-29 11:18:41] apptainer version 1.4.5-2.el9
[2026-03-29 11:18:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 11:18:41] c-210-16.aglt2.org
[2026-03-29 11:18:41] apptainer works
[2026-03-29 11:18:41] Set ATHENA_PROC_NUMBER=8
[2026-03-29 11:18:41] Set ATHENA_CORE_NUMBER=8
[2026-03-29 11:18:41] Starting ATLAS job with PandaID=7066693230
[2026-03-29 11:18:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 12:58:18]  *** The last 200 lines of the pilot log: ***
[2026-03-29 12:58:18]  is_altstaged=None
[2026-03-29 12:58:18]  is_tar=False
[2026-03-29 12:58:18]  lfn=log.49263191._000535.job.log.tgz.1
[2026-03-29 12:58:18]  mtime=0
[2026-03-29 12:58:18]  protocol_id=None
[2026-03-29 12:58:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-29 12:58:18]  replicas=None
[2026-03-29 12:58:18]  scope=mc23_13p6TeV
[2026-03-29 12:58:18]  status=None
[2026-03-29 12:58:18]  status_code=0
[2026-03-29 12:58:18]  storage_token=
[2026-03-29 12:58:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7066693230/log.49263191._000535.job.log.tgz.1
[2026-03-29 12:58:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/1c/log.49263191._000535.job.log.tgz.1
[2026-03-29 12:58:18]  workdir=None
[2026-03-29 12:58:18] ]
[2026-03-29 12:58:18] 2026-03-29 16:57:39,411 | INFO     | transferring file log.49263191._000535.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7066693230/log.49263191._000535.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-29 12:58:18] 2026-03-29 16:57:39,411 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7066693230/log.49263191._000535.job.log.tgz.1 /tmp/boinchome/slots/0/log.49263191._000535.job
[2026-03-29 12:58:18] 2026-03-29 16:57:39,428 | INFO     | adding to output.list: log.49263191._000535.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/1c/log.49263191._000535.job.log.tg
[2026-03-29 12:58:18] 2026-03-29 16:57:39,428 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-29 12:58:18] 2026-03-29 16:57:39,429 | INFO     | summary of transferred files:
[2026-03-29 12:58:18] 2026-03-29 16:57:39,429 | INFO     |  -- lfn=log.49263191._000535.job.log.tgz.1, status_code=0, status=transferred
[2026-03-29 12:58:18] 2026-03-29 16:57:39,429 | INFO     | stage-out finished correctly
[2026-03-29 12:58:18] 2026-03-29 16:57:40,779 | INFO     | time since job start (5928s) is within the limit (345600.0s)
[2026-03-29 12:58:18] 2026-03-29 16:57:40,949 | INFO     | monitor loop #440: job 0:7066693230 is in state 'finished'
[2026-03-29 12:58:18] 2026-03-29 16:57:40,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-29 12:58:18] 2026-03-29 16:57:42,382 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-29 12:58:18] 2026-03-29 16:57:42,786 | INFO     | time since job start (5930s) is within the limit (345600.0s)
[2026-03-29 12:58:18] 2026-03-29 16:57:43,453 | INFO     | monitor loop #441: job 0:7066693230 is in state 'finished'
[2026-03-29 12:58:18] 2026-03-29 16:57:43,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-29 12:58:18] 2026-03-29 16:57:44,791 | INFO     | time since job start (5932s) is within the limit (345600.0s)
[2026-03-29 12:58:18] 2026-03-29 16:57:44,809 | INFO     | job 7066693230 has state=finished
[2026-03-29 12:58:18] 2026-03-29 16:57:44,809 | INFO     | preparing for final server update for job 7066693230 in state='finished'
[2026-03-29 12:58:18] 2026-03-29 16:57:44,809 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7066693230/jobReport.json
[2026-03-29 12:58:18] 2026-03-29 16:57:44,812 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-29 12:58:18] 2026-03-29 16:57:44,812 | INFO     | this job has now completed (state=finished)
[2026-03-29 12:58:18] 2026-03-29 16:57:44,812 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 12:58:18] 2026-03-29 16:57:44,812 | INFO     | log transfer has been attempted: DONE
[2026-03-29 12:58:18] 2026-03-29 16:57:44,812 | INFO     | job 7066693230 has finished - writing final server update
[2026-03-29 12:58:18] 2026-03-29 16:57:44,813 | INFO     | total number of processed events: 400 (read)
[2026-03-29 12:58:18] 2026-03-29 16:57:44,819 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7066693230/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 12:58:18] 2026-03-29 16:57:44,820 | INFO     | extracted standard info from prmon json
[2026-03-29 12:58:18] 2026-03-29 16:57:44,820 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 12:58:18] 2026-03-29 16:57:44,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 12:58:18] 2026-03-29 16:57:44,821 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 12:58:18] 2026-03-29 16:57:44,821 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 12:58:18] 2026-03-29 16:57:44,823 | INFO     | fitting pss+swap vs Time
[2026-03-29 12:58:18] 2026-03-29 16:57:44,823 | INFO     | sum of square deviations: 226022842.5
[2026-03-29 12:58:18] 2026-03-29 16:57:44,824 | INFO     | sum of deviations: -6693473331.0
[2026-03-29 12:58:18] 2026-03-29 16:57:44,824 | INFO     | mean x: 1774800573.5
[2026-03-29 12:58:18] 2026-03-29 16:57:44,824 | INFO     | mean y: 2576734.644444444
[2026-03-29 12:58:18] 2026-03-29 16:57:44,824 | INFO     | intersect: 52561779048.74575
[2026-03-29 12:58:18] 2026-03-29 16:57:44,825 | INFO     | chi2: 0.012411705305997008
[2026-03-29 12:58:18] 2026-03-29 16:57:44,825 | INFO     | current memory leak: -29.61 B/s (using 90 data points, chi2=0.01)
[2026-03-29 12:58:18] 2026-03-29 16:57:44,825 | INFO     | could have reported an average CPU frequency of 2780 MHz (7 samples)
[2026-03-29 12:58:18] 2026-03-29 16:57:44,825 | INFO     | ..............................
[2026-03-29 12:58:18] 2026-03-29 16:57:44,825 | INFO     | . Timing measurements:
[2026-03-29 12:58:18] 2026-03-29 16:57:44,825 | INFO     | . get job = 0 s
[2026-03-29 12:58:18] 2026-03-29 16:57:44,826 | INFO     | . initial setup = 5 s
[2026-03-29 12:58:18] 2026-03-29 16:57:44,826 | INFO     | . payload setup = 6 s
[2026-03-29 12:58:18] 2026-03-29 16:57:44,826 | INFO     | . stage-in = 0 s
[2026-03-29 12:58:18] 2026-03-29 16:57:44,826 | INFO     | . payload execution = 5906 s
[2026-03-29 12:58:18] 2026-03-29 16:57:44,826 | INFO     | . stage-out = 0 s
[2026-03-29 12:58:18] 2026-03-29 16:57:44,826 | INFO     | . log creation = 0 s
[2026-03-29 12:58:18] 2026-03-29 16:57:44,826 | INFO     | ..............................
[2026-03-29 12:58:18] 2026-03-29 16:57:45,406 | INFO     | 
[2026-03-29 12:58:18] 2026-03-29 16:57:45,406 | INFO     | job summary report
[2026-03-29 12:58:18] 2026-03-29 16:57:45,406 | INFO     | --------------------------------------------------
[2026-03-29 12:58:18] 2026-03-29 16:57:45,406 | INFO     | PanDA job id: 7066693230
[2026-03-29 12:58:18] 2026-03-29 16:57:45,406 | INFO     | task id: 49263191
[2026-03-29 12:58:18] 2026-03-29 16:57:45,406 | INFO     | errors: (none)
[2026-03-29 12:58:18] 2026-03-29 16:57:45,406 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 12:58:18] 2026-03-29 16:57:45,407 | INFO     | pilot state: finished 
[2026-03-29 12:58:18] 2026-03-29 16:57:45,407 | INFO     | transexitcode: 0
[2026-03-29 12:58:18] 2026-03-29 16:57:45,407 | INFO     | exeerrorcode: 0
[2026-03-29 12:58:18] 2026-03-29 16:57:45,407 | INFO     | exeerrordiag: 
[2026-03-29 12:58:18] 2026-03-29 16:57:45,407 | INFO     | exitcode: 0
[2026-03-29 12:58:18] 2026-03-29 16:57:45,407 | INFO     | exitmsg: OK
[2026-03-29 12:58:18] 2026-03-29 16:57:45,407 | INFO     | cpuconsumptiontime: 44255 s
[2026-03-29 12:58:18] 2026-03-29 16:57:45,407 | INFO     | nevents: 400
[2026-03-29 12:58:18] 2026-03-29 16:57:45,407 | INFO     | neventsw: 0
[2026-03-29 12:58:18] 2026-03-29 16:57:45,408 | INFO     | pid: 3277503
[2026-03-29 12:58:18] 2026-03-29 16:57:45,408 | INFO     | pgrp: 3277503
[2026-03-29 12:58:18] 2026-03-29 16:57:45,408 | INFO     | corecount: 8
[2026-03-29 12:58:18] 2026-03-29 16:57:45,408 | INFO     | event service: False
[2026-03-29 12:58:18] 2026-03-29 16:57:45,408 | INFO     | sizes: {0: 2279760, 1: 2280221, 11: 2280221, 5914: 2307009, 5915: 2307008, 5916: 2316062, 5919: 2316246, 5921: 2316440}
[2026-03-29 12:58:18] 2026-03-29 16:57:45,408 | INFO     | --------------------------------------------------
[2026-03-29 12:58:18] 2026-03-29 16:57:45,408 | INFO     | 
[2026-03-29 12:58:18] 2026-03-29 16:57:45,408 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-29 12:58:18] 2026-03-29 16:57:45,429 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,429 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,429 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,429 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,431 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 12:58:18] 2026-03-29 16:57:45,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,431 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 12:58:18] 2026-03-29 16:57:45,431 | INFO     | job 7066693230 has completed (purged errors)
[2026-03-29 12:58:18] 2026-03-29 16:57:45,432 | INFO     | overall cleanup function is called
[2026-03-29 12:58:18] 2026-03-29 16:57:46,439 | INFO     | --- collectZombieJob: --- 10, [3277503]
[2026-03-29 12:58:18] 2026-03-29 16:57:46,440 | INFO     | zombie collector waiting for pid 3277503
[2026-03-29 12:58:18] 2026-03-29 16:57:46,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 12:58:18] 2026-03-29 16:57:46,440 | INFO     | collected zombie processes
[2026-03-29 12:58:18] 2026-03-29 16:57:46,440 | INFO     | will attempt to kill all subprocesses of pid=3277503
[2026-03-29 12:58:18] 2026-03-29 16:57:46,665 | INFO     | process IDs to be killed: [3277503] (in reverse order)
[2026-03-29 12:58:18] 2026-03-29 16:57:46,730 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 12:58:18] 2026-03-29 16:57:46,731 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 12:58:18] 2026-03-29 16:57:46,737 | INFO     | did not find any defunct processes belonging to 3277503
[2026-03-29 12:58:18] 2026-03-29 16:57:46,743 | INFO     | did not find any defunct processes belonging to 3277503
[2026-03-29 12:58:18] 2026-03-29 16:57:46,743 | INFO     | ready for new job
[2026-03-29 12:58:18] 2026-03-29 16:57:46,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 12:58:18] 2026-03-29 16:57:46,745 | INFO     | **************************************
[2026-03-29 12:58:18] 2026-03-29 16:57:46,745 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 12:58:18] 2026-03-29 16:57:46,745 | INFO     | **************************************
[2026-03-29 12:58:18] 2026-03-29 16:57:46,745 | INFO     | 
[2026-03-29 12:58:18] 2026-03-29 16:57:46,747 | INFO     | architecture information:
[2026-03-29 12:58:18] 2026-03-29 16:57:46,748 | INFO     | executing command: cat /etc/os-release
[2026-03-29 12:58:18] 2026-03-29 16:57:46,761 | INFO     | cat /etc/os-release:
[2026-03-29 12:58:18] NAME="CentOS Linux"
[2026-03-29 12:58:18] VERSION="7 (Core)"
[2026-03-29 12:58:18] ID="centos"
[2026-03-29 12:58:18] ID_LIKE="rhel fedora"
[2026-03-29 12:58:18] VERSION_ID="7"
[2026-03-29 12:58:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 12:58:18] ANSI_COLOR="0;31"
[2026-03-29 12:58:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 12:58:18] HOME_URL="https://www.centos.org/"
[2026-03-29 12:58:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 12:58:18] 
[2026-03-29 12:58:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 12:58:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 12:58:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 12:58:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 12:58:18] 
[2026-03-29 12:58:18] 2026-03-29 16:57:46,761 | INFO     | **************************************
[2026-03-29 12:58:18] 2026-03-29 16:57:47,264 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-29 12:58:18] 2026-03-29 16:57:47,278 | INFO     | sufficient remaining disk space (51432652800 B)
[2026-03-29 12:58:18] 2026-03-29 16:57:47,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 12:58:18] 2026-03-29 16:57:47,279 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 12:58:18] 2026-03-29 16:57:47,279 | INFO     | update_server=False
[2026-03-29 12:58:18] 2026-03-29 16:57:47,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 12:58:18] 2026-03-29 16:57:47,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 12:58:18] 2026-03-29 16:57:47,280 | INFO     | aborting loop
[2026-03-29 12:58:18] 2026-03-29 16:57:47,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 12:58:18] 2026-03-29 16:57:48,139 | INFO     | all job control threads have been joined
[2026-03-29 12:58:18] 2026-03-29 16:57:48,284 | INFO     | [job] retrieve thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:48,285 | INFO     | [job] job monitor thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:48,288 | INFO     | all data control threads have been joined
[2026-03-29 12:58:18] 2026-03-29 16:57:48,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 12:58:18] 2026-03-29 16:57:48,570 | INFO     | all payload control threads have been joined
[2026-03-29 12:58:18] 2026-03-29 16:57:48,697 | INFO     | [data] copytool_in thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:48,887 | INFO     | [payload] validate_post thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:49,145 | INFO     | [job] control thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:49,291 | INFO     | [data] control thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:49,298 | INFO     | [job] validate thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:49,349 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:49,485 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:49,555 | INFO     | [data] copytool_out thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:49,575 | INFO     | [payload] control thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:49,741 | INFO     | [payload] failed_post thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:49,767 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:49,931 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 12:58:18] 2026-03-29 16:57:50,936 | INFO     | [job] queue monitor thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:52,491 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:57:58,045 | INFO     | job.realtimelogging is not enabled
[2026-03-29 12:58:18] 2026-03-29 16:57:59,051 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 12:58:18] 2026-03-29 16:58:02,343 | INFO     | [monitor] cgroup control has ended
[2026-03-29 12:58:18] 2026-03-29 16:58:03,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860028692288)>', '<ExcThread(monitor, started 139859662448384)>']
[2026-03-29 12:58:18] 2026-03-29 16:58:08,738 | INFO     | all workflow threads have been joined
[2026-03-29 12:58:18] 2026-03-29 16:58:08,738 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 12:58:18] 2026-03-29 16:58:08,739 | INFO     | traces error code: 0
[2026-03-29 12:58:18] 2026-03-29 16:58:08,739 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 12:58:18] 2026-03-29 16:58:18,137 | INFO     | PID=3272672 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-29 12:58:18] 2026-03-29 16:58:18,138 | INFO     | .. there are 5 such processes running
[2026-03-29 12:58:18] 2026-03-29 16:58:18,138 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 12:58:18] 2026-03-29 16:58:18,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 12:58:18] 2026-03-29 16:58:18,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 12:58:18] 2026-03-29 16:58:18,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 12:58:18] 2026-03-29 16:58:18,138 | INFO     | [monitor] control thread has ended
[2026-03-29 12:58:18] 2026-03-29 16:58:18,242 [wrapper] ==== pilot stdout END ====
[2026-03-29 12:58:18] 2026-03-29 16:58:18,245 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 12:58:18] 2026-03-29 16:58:18,247 [wrapper] pilotpid: 3272672
[2026-03-29 12:58:18] 2026-03-29 16:58:18,250 [wrapper] Pilot exit status: 0
[2026-03-29 12:58:18] 2026-03-29 16:58:18,259 [wrapper] pandaids: 7066693230
[2026-03-29 12:58:18] 2026-03-29 16:58:18,303 [wrapper] cleanup supervisor_pilot 3417580 3272673
[2026-03-29 12:58:18] 2026-03-29 16:58:18,306 [wrapper] Test setup, not cleaning
[2026-03-29 12:58:18] 2026-03-29 16:58:18,308 [wrapper] apfmon messages muted
[2026-03-29 12:58:18] 2026-03-29 16:58:18,311 [wrapper] ==== wrapper stdout END ====
[2026-03-29 12:58:18] 2026-03-29 16:58:18,313 [wrapper] ==== wrapper stderr END ====
[2026-03-29 12:58:18]  *** Error codes and diagnostics ***
[2026-03-29 12:58:18]     "exeErrorCode": 0,
[2026-03-29 12:58:18]     "exeErrorDiag": "",
[2026-03-29 12:58:18]     "pilotErrorCode": 0,
[2026-03-29 12:58:18]     "pilotErrorDiag": "",
[2026-03-29 12:58:18]  *** Listing of results directory ***
[2026-03-29 12:58:18] total 419488
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas    585013 Mar 29 04:23 pilot3.tar.gz
[2026-03-29 12:58:18] -rwx------. 1 boincer umatlas     36322 Mar 29 04:26 runpilot2-wrapper.sh
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas      5118 Mar 29 04:27 queuedata.json
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas       100 Mar 29 11:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 12:58:18] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 29 11:18 run_atlas
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas       105 Mar 29 11:18 job.xml
[2026-03-29 12:58:18] -rw-r--r--. 2 boincer umatlas 226161012 Mar 29 11:18 EVNT.49263189._000022.pool.root.1
[2026-03-29 12:58:18] -rw-r--r--. 2 boincer umatlas     15845 Mar 29 11:18 start_atlas.sh
[2026-03-29 12:58:18] drwxrwx--x. 2 boincer umatlas      4096 Mar 29 11:18 shared
[2026-03-29 12:58:18] -rw-r--r--. 2 boincer umatlas    597534 Mar 29 11:18 input.tar.gz
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas         0 Mar 29 11:18 boinc_lockfile
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas      2571 Mar 29 11:18 pandaJob.out
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas        57 Mar 29 11:18 setup.sh.local
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas   1003389 Mar 29 11:18 agis_schedconf.cvmfs.json
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas   1511579 Mar 29 11:18 agis_ddmendpoints.agis.ALL.json
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas       442 Mar 29 11:18 workernode_map.json
[2026-03-29 12:58:18] drwx------. 5 boincer umatlas      4096 Mar 29 11:18 pilot3
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas      6663 Mar 29 12:55 init_data.xml
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas 197053212 Mar 29 12:57 HITS.49263191._000535.pool.root.1
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas       529 Mar 29 12:57 boinc_task_state.xml
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas      1032 Mar 29 12:57 memory_monitor_summary.json
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas    341060 Mar 29 12:57 log.49263191._000535.job.log.tgz.1
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas        95 Mar 29 12:57 pilot_heartbeat.json
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas      6377 Mar 29 12:57 heartbeat.json
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas      8192 Mar 29 12:58 boinc_mmap_file
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas        27 Mar 29 12:58 wrapper_checkpoint.txt
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas       822 Mar 29 12:58 pilotlog.txt
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas    860960 Mar 29 12:58 log.49263191._000535.job.log.1
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas       357 Mar 29 12:58 output.list
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas       620 Mar 29 12:58 runtime_log
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas   1218560 Mar 29 12:58 result.tar.gz
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas       652 Mar 29 12:58 zrvKDmne0Q9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmz4JKDmJDQfkn.diag
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas      9341 Mar 29 12:58 runtime_log.err
[2026-03-29 12:58:18] -rw-r--r--. 1 boincer umatlas     21495 Mar 29 12:58 stderr.txt
[2026-03-29 12:58:18] HITS file was successfully produced:
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas 197053212 Mar 29 12:57 shared/HITS.pool.root.1
[2026-03-29 12:58:18]  *** Contents of shared directory: ***
[2026-03-29 12:58:18] total 415100
[2026-03-29 12:58:18] -rw-r--r--. 2 boincer umatlas 226161012 Mar 29 11:18 ATLAS.root_0
[2026-03-29 12:58:18] -rw-r--r--. 2 boincer umatlas     15845 Mar 29 11:18 start_atlas.sh
[2026-03-29 12:58:18] -rw-r--r--. 2 boincer umatlas    597534 Mar 29 11:18 input.tar.gz
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas 197053212 Mar 29 12:57 HITS.pool.root.1
[2026-03-29 12:58:18] -rw-------. 1 boincer umatlas   1218560 Mar 29 12:58 result.tar.gz
12:58:19 (3268920): run_atlas exited; CPU time 44390.646670
12:58:19 (3268920): called boinc_finish(0)

</stderr_txt>
]]>

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