Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:56:23 (370712): wrapper (7.7.26015): starting
08:56:23 (370712): wrapper: running run_atlas (--nthreads 8)
[2026-03-29 08:56:23] Arguments: --nthreads 8
[2026-03-29 08:56:23] Threads: 8
[2026-03-29 08:56:23] Checking for CVMFS
[2026-03-29 08:56:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 08:56:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 08:56:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 08:56:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 08:56:25] 2.13.3.0 10276 135171 300676 157842 1 280 39924378 40960001 20529 16776704 0 1019565319 99.734 731893056 44148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-29 08:56:25] CVMFS is ok
[2026-03-29 08:56:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 08:56:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-29 08:56:25] Further information can be found at the LHC@home message board.
[2026-03-29 08:56:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 08:56:25] Checking for apptainer binary...
[2026-03-29 08:56:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-29 08:56:25] Running /usr/bin/apptainer --version
[2026-03-29 08:56:25] apptainer version 1.4.5-2.el9
[2026-03-29 08:56:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 08:56:25] c-208-36.aglt2.org
[2026-03-29 08:56:25] apptainer works
[2026-03-29 08:56:25] Set ATHENA_PROC_NUMBER=8
[2026-03-29 08:56:25] Set ATHENA_CORE_NUMBER=8
[2026-03-29 08:56:25] Starting ATLAS job with PandaID=7066428595
[2026-03-29 08:56:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:00:11 (370712): BOINC client no longer exists - exiting
10:00:11 (370712): timer handler: client dead, exiting
10:10:36 (1206491): wrapper (7.7.26015): starting
10:10:36 (1206491): wrapper: running run_atlas (--nthreads 11)
[2026-03-29 10:10:36] Arguments: --nthreads 11
[2026-03-29 10:10:36] Threads: 11
[2026-03-29 10:10:36] This job has been restarted, cleaning up previous attempt
[2026-03-29 10:10:36] Checking for CVMFS
[2026-03-29 10:10:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 10:10:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 10:10:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 10:10:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 10:10:37] 2.13.3.0 10276 135246 311792 157844 3 132 40517932 40960000 16453 16776704 0 1019924213 99.734 731895745 44148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-29 10:10:37] CVMFS is ok
[2026-03-29 10:10:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 10:10:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-29 10:10:37] Further information can be found at the LHC@home message board.
[2026-03-29 10:10:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 10:10:37] Checking for apptainer binary...
[2026-03-29 10:10:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-29 10:10:37] Running /usr/bin/apptainer --version
[2026-03-29 10:10:37] apptainer version 1.4.5-2.el9
[2026-03-29 10:10:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 10:10:37] c-208-36.aglt2.org
[2026-03-29 10:10:37] apptainer works
[2026-03-29 10:10:37] Set ATHENA_PROC_NUMBER=11
[2026-03-29 10:10:37] Set ATHENA_CORE_NUMBER=11
[2026-03-29 10:10:37] Starting ATLAS job with PandaID=7066428595
[2026-03-29 10:10:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 11:33:25]  *** The last 200 lines of the pilot log: ***
[2026-03-29 11:33:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-29 11:33:25]  is_altstaged=None
[2026-03-29 11:33:25]  is_tar=False
[2026-03-29 11:33:25]  lfn=log.49263208._000676.job.log.tgz.1
[2026-03-29 11:33:25]  mtime=0
[2026-03-29 11:33:25]  protocol_id=None
[2026-03-29 11:33:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-29 11:33:25]  replicas=None
[2026-03-29 11:33:25]  scope=mc23_13p6TeV
[2026-03-29 11:33:25]  status=None
[2026-03-29 11:33:25]  status_code=0
[2026-03-29 11:33:25]  storage_token=
[2026-03-29 11:33:25]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-7066428595/log.49263208._000676.job.log.tgz.1
[2026-03-29 11:33:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/8e/log.49263208._000676.job.log.tgz.1
[2026-03-29 11:33:25]  workdir=None
[2026-03-29 11:33:25] ]
[2026-03-29 11:33:25] 2026-03-29 15:32:06,871 | INFO     | transferring file log.49263208._000676.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-7066428595/log.49263208._000676.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-29 11:33:25] 2026-03-29 15:32:06,871 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-7066428595/log.49263208._000676.job.log.tgz.1 /tmp/boinchome/slots/4/log.49263208._000676.job
[2026-03-29 11:33:25] 2026-03-29 15:32:07,070 | INFO     | adding to output.list: log.49263208._000676.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/8e/log.49263208._000676.job.log.tg
[2026-03-29 11:33:25] 2026-03-29 15:32:07,070 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-29 11:33:25] 2026-03-29 15:32:07,070 | INFO     | summary of transferred files:
[2026-03-29 11:33:25] 2026-03-29 15:32:07,070 | INFO     |  -- lfn=log.49263208._000676.job.log.tgz.1, status_code=0, status=transferred
[2026-03-29 11:33:25] 2026-03-29 15:32:07,071 | INFO     | stage-out finished correctly
[2026-03-29 11:33:25] 2026-03-29 15:32:07,669 | INFO     | monitor loop #309: job 0:7066428595 is in state 'finished'
[2026-03-29 11:33:25] 2026-03-29 15:32:07,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-29 11:33:25] 2026-03-29 15:32:07,805 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-29 11:33:25] 2026-03-29 15:32:08,552 | INFO     | time since job start (4880s) is within the limit (345600.0s)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,185 | INFO     | monitor loop #310: job 0:7066428595 is in state 'finished'
[2026-03-29 11:33:25] 2026-03-29 15:32:10,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,558 | INFO     | time since job start (4882s) is within the limit (345600.0s)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,649 | INFO     | job 7066428595 has state=finished
[2026-03-29 11:33:25] 2026-03-29 15:32:10,650 | INFO     | preparing for final server update for job 7066428595 in state='finished'
[2026-03-29 11:33:25] 2026-03-29 15:32:10,650 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7066428595/jobReport.json
[2026-03-29 11:33:25] 2026-03-29 15:32:10,651 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-03-29 11:33:25] 2026-03-29 15:32:10,651 | INFO     | this job has now completed (state=finished)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,652 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,652 | INFO     | log transfer has been attempted: DONE
[2026-03-29 11:33:25] 2026-03-29 15:32:10,652 | INFO     | job 7066428595 has finished - writing final server update
[2026-03-29 11:33:25] 2026-03-29 15:32:10,652 | INFO     | total number of processed events: 400 (read)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,664 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7066428595/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,664 | INFO     | extracted standard info from prmon json
[2026-03-29 11:33:25] 2026-03-29 15:32:10,664 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 11:33:25] 2026-03-29 15:32:10,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 11:33:25] 2026-03-29 15:32:10,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 11:33:25] 2026-03-29 15:32:10,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 11:33:25] 2026-03-29 15:32:10,665 | INFO     | fitting pss+swap vs Time
[2026-03-29 11:33:25] 2026-03-29 15:32:10,666 | INFO     | sum of square deviations: 120597371.50684932
[2026-03-29 11:33:25] 2026-03-29 15:32:10,666 | INFO     | sum of deviations: 554701536.6164384
[2026-03-29 11:33:25] 2026-03-29 15:32:10,666 | INFO     | mean x: 1774795976.0821917
[2026-03-29 11:33:25] 2026-03-29 15:32:10,666 | INFO     | mean y: 2639676.397260274
[2026-03-29 11:33:25] 2026-03-29 15:32:10,666 | INFO     | intersect: -8160739365.886009
[2026-03-29 11:33:25] 2026-03-29 15:32:10,666 | INFO     | chi2: 0.0009370698663655766
[2026-03-29 11:33:25] 2026-03-29 15:32:10,666 | INFO     | current memory leak: 4.60 B/s (using 73 data points, chi2=0.00)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,666 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,666 | INFO     | ..............................
[2026-03-29 11:33:25] 2026-03-29 15:32:10,667 | INFO     | . Timing measurements:
[2026-03-29 11:33:25] 2026-03-29 15:32:10,667 | INFO     | . get job = 0 s
[2026-03-29 11:33:25] 2026-03-29 15:32:10,667 | INFO     | . initial setup = 0 s
[2026-03-29 11:33:25] 2026-03-29 15:32:10,667 | INFO     | . payload setup = 10 s
[2026-03-29 11:33:25] 2026-03-29 15:32:10,667 | INFO     | . stage-in = 0 s
[2026-03-29 11:33:25] 2026-03-29 15:32:10,667 | INFO     | . payload execution = 4848 s
[2026-03-29 11:33:25] 2026-03-29 15:32:10,667 | INFO     | . stage-out = 2 s
[2026-03-29 11:33:25] 2026-03-29 15:32:10,667 | INFO     | . log creation = 0 s
[2026-03-29 11:33:25] 2026-03-29 15:32:10,667 | INFO     | ..............................
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | 
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | job summary report
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | --------------------------------------------------
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | PanDA job id: 7066428595
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | task id: 49263208
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | errors: (none)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | pilot state: finished 
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | transexitcode: 0
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | exeerrorcode: 0
[2026-03-29 11:33:25] 2026-03-29 15:32:10,718 | INFO     | exeerrordiag: 
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | exitcode: 0
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | exitmsg: OK
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | cpuconsumptiontime: 22411 s
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | nevents: 400
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | neventsw: 0
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | pid: 1248319
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | pgrp: 1248319
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | corecount: 11
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | event service: False
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | sizes: {0: 2280236, 11: 2280236, 4863: 2306481, 4868: 2315535, 4871: 2315673}
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | --------------------------------------------------
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | 
[2026-03-29 11:33:25] 2026-03-29 15:32:10,719 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-29 11:33:25] 2026-03-29 15:32:10,795 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | job 7066428595 has completed (purged errors)
[2026-03-29 11:33:25] 2026-03-29 15:32:10,796 | INFO     | overall cleanup function is called
[2026-03-29 11:33:25] 2026-03-29 15:32:11,812 | INFO     | --- collectZombieJob: --- 10, [1248319]
[2026-03-29 11:33:25] 2026-03-29 15:32:11,814 | INFO     | zombie collector waiting for pid 1248319
[2026-03-29 11:33:25] 2026-03-29 15:32:11,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 11:33:25] 2026-03-29 15:32:11,814 | INFO     | collected zombie processes
[2026-03-29 11:33:25] 2026-03-29 15:32:11,815 | INFO     | will attempt to kill all subprocesses of pid=1248319
[2026-03-29 11:33:25] 2026-03-29 15:32:13,202 | INFO     | process IDs to be killed: [1248319] (in reverse order)
[2026-03-29 11:33:25] 2026-03-29 15:32:13,685 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 11:33:25] 2026-03-29 15:32:13,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 11:33:25] 2026-03-29 15:32:13,727 | INFO     | did not find any defunct processes belonging to 1248319
[2026-03-29 11:33:25] 2026-03-29 15:32:13,748 | INFO     | did not find any defunct processes belonging to 1248319
[2026-03-29 11:33:25] 2026-03-29 15:32:13,748 | INFO     | ready for new job
[2026-03-29 11:33:25] 2026-03-29 15:32:13,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 11:33:25] 2026-03-29 15:32:13,750 | INFO     | **************************************
[2026-03-29 11:33:25] 2026-03-29 15:32:13,750 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 11:33:25] 2026-03-29 15:32:13,750 | INFO     | **************************************
[2026-03-29 11:33:25] 2026-03-29 15:32:13,750 | INFO     | 
[2026-03-29 11:33:25] 2026-03-29 15:32:13,754 | INFO     | architecture information:
[2026-03-29 11:33:25] 2026-03-29 15:32:13,754 | INFO     | executing command: cat /etc/os-release
[2026-03-29 11:33:25] 2026-03-29 15:32:13,775 | INFO     | cat /etc/os-release:
[2026-03-29 11:33:25] NAME="CentOS Linux"
[2026-03-29 11:33:25] VERSION="7 (Core)"
[2026-03-29 11:33:25] ID="centos"
[2026-03-29 11:33:25] ID_LIKE="rhel fedora"
[2026-03-29 11:33:25] VERSION_ID="7"
[2026-03-29 11:33:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 11:33:25] ANSI_COLOR="0;31"
[2026-03-29 11:33:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 11:33:25] HOME_URL="https://www.centos.org/"
[2026-03-29 11:33:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 11:33:25] 
[2026-03-29 11:33:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 11:33:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 11:33:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 11:33:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 11:33:25] 
[2026-03-29 11:33:25] 2026-03-29 15:32:13,775 | INFO     | **************************************
[2026-03-29 11:33:25] 2026-03-29 15:32:14,292 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-29 11:33:25] 2026-03-29 15:32:14,388 | INFO     | sufficient remaining disk space (169269526528 B)
[2026-03-29 11:33:25] 2026-03-29 15:32:14,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 11:33:25] 2026-03-29 15:32:14,389 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 11:33:25] 2026-03-29 15:32:14,389 | INFO     | update_server=False
[2026-03-29 11:33:25] 2026-03-29 15:32:14,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 11:33:25] 2026-03-29 15:32:14,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 11:33:25] 2026-03-29 15:32:14,389 | INFO     | aborting loop
[2026-03-29 11:33:25] 2026-03-29 15:32:14,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 11:33:25] 2026-03-29 15:32:15,096 | INFO     | all job control threads have been joined
[2026-03-29 11:33:25] 2026-03-29 15:32:15,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 11:33:25] 2026-03-29 15:32:15,332 | INFO     | all data control threads have been joined
[2026-03-29 11:33:25] 2026-03-29 15:32:15,351 | INFO     | all payload control threads have been joined
[2026-03-29 11:33:25] 2026-03-29 15:32:15,395 | INFO     | [job] retrieve thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:15,398 | INFO     | [job] job monitor thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:15,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 11:33:25] 2026-03-29 15:32:15,739 | INFO     | [payload] validate_post thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:15,861 | INFO     | [payload] failed_post thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:16,057 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:16,102 | INFO     | [job] control thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:16,321 | INFO     | [job] validate thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:16,338 | INFO     | [data] control thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:16,357 | INFO     | [payload] control thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:16,533 | INFO     | [data] copytool_in thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:16,636 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:16,741 | INFO     | [job] queue monitor thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:16,859 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:17,197 | INFO     | [data] copytool_out thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:18,407 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:25,276 | INFO     | job.realtimelogging is not enabled
[2026-03-29 11:33:25] 2026-03-29 15:32:26,282 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 11:33:25] 2026-03-29 15:32:45,499 | INFO     | PID=1233318 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-29 11:33:25] 2026-03-29 15:32:45,500 | INFO     | .. there are 22 such processes running
[2026-03-29 11:33:25] 2026-03-29 15:32:45,504 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 11:33:25] 2026-03-29 15:32:45,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 11:33:25] 2026-03-29 15:32:45,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 11:33:25] 2026-03-29 15:32:56,560 | INFO     | [monitor] cgroup control has ended
[2026-03-29 11:33:25] 2026-03-29 15:32:57,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755678545728)>', '<ExcThread(monitor, started 139755148801792)>']
[2026-03-29 11:33:25] 2026-03-29 15:32:58,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 11:33:25] 2026-03-29 15:32:58,583 | INFO     | [monitor] control thread has ended
[2026-03-29 11:33:25] 2026-03-29 15:33:02,678 | INFO     | all workflow threads have been joined
[2026-03-29 11:33:25] 2026-03-29 15:33:02,679 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 11:33:25] 2026-03-29 15:33:02,679 | INFO     | traces error code: 0
[2026-03-29 11:33:25] 2026-03-29 15:33:02,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 11:33:25] 2026-03-29 15:33:03,681 [wrapper] ==== pilot stdout END ====
[2026-03-29 11:33:25] 2026-03-29 15:33:03,716 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 11:33:25] 2026-03-29 15:33:03,752 [wrapper] pilotpid: 1233318
[2026-03-29 11:33:25] 2026-03-29 15:33:03,790 [wrapper] Pilot exit status: 0
[2026-03-29 11:33:25] 2026-03-29 15:33:03,925 [wrapper] pandaids: 7066428595 7066428595
[2026-03-29 11:33:25] 2026-03-29 15:33:06,107 [wrapper] cleanup supervisor_pilot 2156834 1233320
[2026-03-29 11:33:25] 2026-03-29 15:33:06,127 [wrapper] Test setup, not cleaning
[2026-03-29 11:33:25] 2026-03-29 15:33:06,150 [wrapper] apfmon messages muted
[2026-03-29 11:33:25] 2026-03-29 15:33:06,176 [wrapper] ==== wrapper stdout END ====
[2026-03-29 11:33:25] 2026-03-29 15:33:06,187 [wrapper] ==== wrapper stderr END ====
[2026-03-29 11:33:25]  *** Error codes and diagnostics ***
[2026-03-29 11:33:25]     "exeErrorCode": 0,
[2026-03-29 11:33:25]     "exeErrorDiag": "",
[2026-03-29 11:33:25]     "pilotErrorCode": 0,
[2026-03-29 11:33:25]     "pilotErrorDiag": "",
[2026-03-29 11:33:25]  *** Listing of results directory ***
[2026-03-29 11:33:25] total 630552
[2026-03-29 11:33:25] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas    585013 Mar 29 02:35 pilot3.tar.gz
[2026-03-29 11:33:25] -rwx------. 1 boincer umatlas     36322 Mar 29 02:36 runpilot2-wrapper.sh
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas      5118 Mar 29 02:36 queuedata.json
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas       100 Mar 29 08:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 11:33:25] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 29 08:56 run_atlas
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas       105 Mar 29 08:56 job.xml
[2026-03-29 11:33:25] -rw-r--r--. 3 boincer umatlas 221885082 Mar 29 08:56 EVNT.49263206._000110.pool.root.1
[2026-03-29 11:33:25] -rw-r--r--. 3 boincer umatlas 221885082 Mar 29 08:56 ATLAS.root_0
[2026-03-29 11:33:25] -rw-r--r--. 2 boincer umatlas     15845 Mar 29 08:56 start_atlas.sh
[2026-03-29 11:33:25] drwxrwx--x. 2 boincer umatlas      4096 Mar 29 08:56 shared
[2026-03-29 11:33:25] -rw-r--r--. 2 boincer umatlas    597523 Mar 29 08:56 input.tar.gz
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas         0 Mar 29 08:56 boinc_lockfile
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas   1511579 Mar 29 08:57 agis_ddmendpoints.agis.ALL.json
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas      2567 Mar 29 10:10 pandaJob.out
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas        57 Mar 29 10:10 setup.sh.local
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas   1003389 Mar 29 10:10 agis_schedconf.cvmfs.json
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas       432 Mar 29 10:10 workernode_map.json
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas 195947711 Mar 29 11:30 HITS.49263208._000676.pool.root.1
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas       530 Mar 29 11:30 boinc_task_state.xml
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas      7185 Mar 29 11:31 init_data.xml
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas      1047 Mar 29 11:31 memory_monitor_summary.json
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas    355633 Mar 29 11:32 log.49263208._000676.job.log.tgz.1
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas      6359 Mar 29 11:32 heartbeat.json
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas        96 Mar 29 11:32 pilot_heartbeat.json
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas      4893 Mar 29 11:33 pilotlog.txt
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas    657783 Mar 29 11:33 log.49263208._000676.job.log.1
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas       357 Mar 29 11:33 output.list
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas       620 Mar 29 11:33 runtime_log
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas   1034240 Mar 29 11:33 result.tar.gz
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas      9428 Mar 29 11:33 runtime_log.err
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas       783 Mar 29 11:33 7RCODm6vyQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmrsJKDmvtsy4m.diag
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas        27 Mar 29 11:33 wrapper_checkpoint.txt
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas      8192 Mar 29 11:33 boinc_mmap_file
[2026-03-29 11:33:25] -rw-r--r--. 1 boincer umatlas     23719 Mar 29 11:33 stderr.txt
[2026-03-29 11:33:25] HITS file was successfully produced:
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas 195947711 Mar 29 11:30 shared/HITS.pool.root.1
[2026-03-29 11:33:25]  *** Contents of shared directory: ***
[2026-03-29 11:33:25] total 409660
[2026-03-29 11:33:25] -rw-r--r--. 3 boincer umatlas 221885082 Mar 29 08:56 ATLAS.root_0
[2026-03-29 11:33:25] -rw-r--r--. 2 boincer umatlas     15845 Mar 29 08:56 start_atlas.sh
[2026-03-29 11:33:25] -rw-r--r--. 2 boincer umatlas    597523 Mar 29 08:56 input.tar.gz
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas 195947711 Mar 29 11:30 HITS.pool.root.1
[2026-03-29 11:33:25] -rw-------. 1 boincer umatlas   1034240 Mar 29 11:33 result.tar.gz
11:33:26 (1206491): run_atlas exited; CPU time 22571.344120
11:33:26 (1206491): called boinc_finish(0)

</stderr_txt>
]]>

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