Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:06:24 (1926938): wrapper (7.7.26015): starting
06:06:24 (1926938): wrapper: running run_atlas (--nthreads 4)
[2026-03-30 06:06:24] Arguments: --nthreads 4
[2026-03-30 06:06:24] Threads: 4
[2026-03-30 06:06:24] Checking for CVMFS
[2026-03-30 06:06:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 06:06:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 06:06:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 06:06:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 06:06:25] 2.9.2.0 1501249 3079 87952 157866 3 50 32196174 36864000 0 130560 0 1442987 99.985 112023 20416 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-30 06:06:25] CVMFS is ok
[2026-03-30 06:06:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 06:06:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 06:06:25] Further information can be found at the LHC@home message board.
[2026-03-30 06:06:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 06:06:25] Checking for apptainer binary...
[2026-03-30 06:06:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 06:06:25] Running /usr/bin/apptainer --version
[2026-03-30 06:06:25] apptainer version 1.4.1-1.1
[2026-03-30 06:06:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 06:06:25] thA314
[2026-03-30 06:06:25] apptainer works
[2026-03-30 06:06:25] Set ATHENA_PROC_NUMBER=4
[2026-03-30 06:06:25] Set ATHENA_CORE_NUMBER=4
[2026-03-30 06:06:25] Starting ATLAS job with PandaID=7069700107
[2026-03-30 06:06:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 07:20:02]  *** The last 200 lines of the pilot log: ***
[2026-03-30 07:20:02] 2026-03-30 05:19:30,971 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 07:20:02] 2026-03-30 05:19:30,971 | INFO     | job 7069700107 has completed (purged errors)
[2026-03-30 07:20:02] 2026-03-30 05:19:30,971 | INFO     | overall cleanup function is called
[2026-03-30 07:20:02] 2026-03-30 05:19:31,976 | INFO     | --- collectZombieJob: --- 10, [1935571]
[2026-03-30 07:20:02] 2026-03-30 05:19:31,976 | INFO     | zombie collector waiting for pid 1935571
[2026-03-30 07:20:02] 2026-03-30 05:19:31,976 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 07:20:02] 2026-03-30 05:19:31,976 | INFO     | collected zombie processes
[2026-03-30 07:20:02] 2026-03-30 05:19:31,976 | INFO     | will attempt to kill all subprocesses of pid=1935571
[2026-03-30 07:20:02] 2026-03-30 05:19:32,024 | INFO     | process IDs to be killed: [1935571] (in reverse order)
[2026-03-30 07:20:02] 2026-03-30 05:19:32,059 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 07:20:02] 2026-03-30 05:19:32,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 07:20:02] 2026-03-30 05:19:32,062 | INFO     | did not find any defunct processes belonging to 1935571
[2026-03-30 07:20:02] 2026-03-30 05:19:32,063 | INFO     | did not find any defunct processes belonging to 1935571
[2026-03-30 07:20:02] 2026-03-30 05:19:32,063 | INFO     | ready for new job
[2026-03-30 07:20:02] 2026-03-30 05:19:32,063 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-30 07:20:02] 2026-03-30 05:19:32,064 | INFO     | **************************************
[2026-03-30 07:20:02] 2026-03-30 05:19:32,064 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-30 07:20:02] 2026-03-30 05:19:32,064 | INFO     | **************************************
[2026-03-30 07:20:02] 2026-03-30 05:19:32,064 | INFO     | 
[2026-03-30 07:20:02] 2026-03-30 05:19:32,064 | INFO     | architecture information:
[2026-03-30 07:20:02] 2026-03-30 05:19:32,065 | INFO     | executing command: cat /etc/os-release
[2026-03-30 07:20:02] 2026-03-30 05:19:32,080 | INFO     | cat /etc/os-release:
[2026-03-30 07:20:02] NAME="CentOS Linux"
[2026-03-30 07:20:02] VERSION="7 (Core)"
[2026-03-30 07:20:02] ID="centos"
[2026-03-30 07:20:02] ID_LIKE="rhel fedora"
[2026-03-30 07:20:02] VERSION_ID="7"
[2026-03-30 07:20:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 07:20:02] ANSI_COLOR="0;31"
[2026-03-30 07:20:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 07:20:02] HOME_URL="https://www.centos.org/"
[2026-03-30 07:20:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 07:20:02] 
[2026-03-30 07:20:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 07:20:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 07:20:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 07:20:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 07:20:02] 
[2026-03-30 07:20:02] 2026-03-30 05:19:32,080 | INFO     | **************************************
[2026-03-30 07:20:02] 2026-03-30 05:19:32,583 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-30 07:20:02] 2026-03-30 05:19:32,601 | INFO     | sufficient remaining disk space (226154774528 B)
[2026-03-30 07:20:02] 2026-03-30 05:19:32,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 07:20:02] 2026-03-30 05:19:32,602 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 07:20:02] 2026-03-30 05:19:32,602 | INFO     | update_server=False
[2026-03-30 07:20:02] 2026-03-30 05:19:32,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-30 07:20:02] 2026-03-30 05:19:32,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 07:20:02] 2026-03-30 05:19:32,602 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 07:20:02] 2026-03-30 05:19:32,602 | INFO     | aborting loop
[2026-03-30 07:20:02] 2026-03-30 05:19:32,608 | INFO     | all job control threads have been joined
[2026-03-30 07:20:02] 2026-03-30 05:19:32,908 | INFO     | all data control threads have been joined
[2026-03-30 07:20:02] 2026-03-30 05:19:33,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 07:20:02] 2026-03-30 05:19:33,607 | INFO     | [job] retrieve thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:33,608 | INFO     | [job] queue monitor thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:33,608 | INFO     | [job] job monitor thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:33,614 | INFO     | [job] control thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:33,759 | INFO     | all payload control threads have been joined
[2026-03-30 07:20:02] 2026-03-30 05:19:33,759 | INFO     | job.realtimelogging is not enabled
[2026-03-30 07:20:02] 2026-03-30 05:19:33,913 | INFO     | [data] control thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:34,125 | INFO     | [job] validate thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:34,222 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:34,322 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:34,412 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:34,533 | INFO     | [payload] failed_post thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:34,560 | INFO     | [data] copytool_in thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:34,765 | INFO     | [payload] control thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:34,765 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:34,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 07:20:02] 2026-03-30 05:19:35,035 | INFO     | [payload] validate_post thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:35,527 | INFO     | [data] copytool_out thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:38,843 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 07:20:02] 2026-03-30 05:19:42,829 | INFO     | [monitor] cgroup control has ended
[2026-03-30 07:20:02] 2026-03-30 05:19:44,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680585144128)>', '<ExcThread(monitor, started 140679497901824)>']
[2026-03-30 07:20:02] 2026-03-30 05:19:49,526 | INFO     | all workflow threads have been joined
[2026-03-30 07:20:02] 2026-03-30 05:19:49,526 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 07:20:02] 2026-03-30 05:19:49,527 | INFO     | traces error code: 0
[2026-03-30 07:20:02] 2026-03-30 05:19:49,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 07:20:02] 2026-03-30 05:20:02,631 | INFO     | PID=1931046 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-30 07:20:02] 2026-03-30 05:20:02,631 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 07:20:02] 2026-03-30 05:20:02,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 07:20:02] 2026-03-30 05:20:02,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 07:20:02] 2026-03-30 05:20:02,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 07:20:02] 2026-03-30 05:20:02,632 | INFO     | [monitor] control thread has ended
[2026-03-30 07:20:02] 2026-03-30 05:20:02,709 [wrapper] ==== pilot stdout END ====
[2026-03-30 07:20:02] 2026-03-30 05:20:02,713 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 07:20:02] 2026-03-30 05:20:02,718 [wrapper] pilotpid: 1931046
[2026-03-30 07:20:02] 2026-03-30 05:20:02,722 [wrapper] Pilot exit status: 0
[2026-03-30 07:20:02] 2026-03-30 05:20:02,734 [wrapper] pandaids: 7069700107
[2026-03-30 07:20:02] 2026-03-30 05:20:02,758 [wrapper] cleanup supervisor_pilot 1941478 1931047
[2026-03-30 07:20:02] 2026-03-30 05:20:02,762 [wrapper] Test setup, not cleaning
[2026-03-30 07:20:02] 2026-03-30 05:20:02,767 [wrapper] apfmon messages muted
[2026-03-30 07:20:02] 2026-03-30 05:20:02,770 [wrapper] ==== wrapper stdout END ====
[2026-03-30 07:20:02] 2026-03-30 05:20:02,774 [wrapper] ==== wrapper stderr END ====
[2026-03-30 07:20:02]  *** Error codes and diagnostics ***
[2026-03-30 07:20:02]     "exeErrorCode": 0,
[2026-03-30 07:20:02]     "exeErrorDiag": "",
[2026-03-30 07:20:02]     "pilotErrorCode": 0,
[2026-03-30 07:20:02]     "pilotErrorDiag": "",
[2026-03-30 07:20:02]  *** Listing of results directory ***
[2026-03-30 07:20:02] total 408056
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc    585013 Mar 29 14:32 pilot3.tar.gz
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc      5118 Mar 29 14:32 queuedata.json
[2026-03-30 07:20:02] -rwx------ 1 boinc boinc     36322 Mar 29 14:33 runpilot2-wrapper.sh
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc       100 Mar 30 06:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 07:20:02] -rwxr-xr-x 1 boinc boinc      7986 Mar 30 06:06 run_atlas
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc       105 Mar 30 06:06 job.xml
[2026-03-30 07:20:02] -rw-r--r-- 2 boinc boinc 222432366 Mar 30 06:06 EVNT.49263189._000074.pool.root.1
[2026-03-30 07:20:02] -rw-r--r-- 2 boinc boinc    597535 Mar 30 06:06 input.tar.gz
[2026-03-30 07:20:02] -rw-r--r-- 2 boinc boinc     15845 Mar 30 06:06 start_atlas.sh
[2026-03-30 07:20:02] drwxrwx--x 2 boinc boinc      4096 Mar 30 06:06 shared
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc         0 Mar 30 06:06 boinc_setup_complete
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc      6376 Mar 30 06:06 init_data.xml
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc         0 Mar 30 06:06 boinc_lockfile
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc      2570 Mar 30 06:06 pandaJob.out
[2026-03-30 07:20:02] -rw------- 1 boinc boinc   1004055 Mar 30 06:06 agis_schedconf.cvmfs.json
[2026-03-30 07:20:02] -rw------- 1 boinc boinc   1511579 Mar 30 06:06 agis_ddmendpoints.agis.ALL.json
[2026-03-30 07:20:02] -rw------- 1 boinc boinc       426 Mar 30 06:06 workernode_map.json
[2026-03-30 07:20:02] drwx------ 5 boinc boinc      4096 Mar 30 06:06 pilot3
[2026-03-30 07:20:02] -rw------- 1 boinc boinc 189713404 Mar 30 07:19 HITS.49263191._001826.pool.root.1
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc       529 Mar 30 07:19 boinc_task_state.xml
[2026-03-30 07:20:02] -rw------- 1 boinc boinc      1021 Mar 30 07:19 memory_monitor_summary.json
[2026-03-30 07:20:02] -rw------- 1 boinc boinc    245086 Mar 30 07:19 log.49263191._001826.job.log.tgz.1
[2026-03-30 07:20:02] -rw------- 1 boinc boinc      6302 Mar 30 07:19 heartbeat.json
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc      8192 Mar 30 07:19 boinc_mmap_file
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc        27 Mar 30 07:19 wrapper_checkpoint.txt
[2026-03-30 07:20:02] -rw------- 1 boinc boinc       747 Mar 30 07:20 pilotlog.txt
[2026-03-30 07:20:02] -rw------- 1 boinc boinc        95 Mar 30 07:20 pilot_heartbeat.json
[2026-03-30 07:20:02] -rw------- 1 boinc boinc    646928 Mar 30 07:20 log.49263191._001826.job.log.1
[2026-03-30 07:20:02] -rw------- 1 boinc boinc       357 Mar 30 07:20 output.list
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc       620 Mar 30 07:20 runtime_log
[2026-03-30 07:20:02] -rw------- 1 boinc boinc    911360 Mar 30 07:20 result.tar.gz
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc      8896 Mar 30 07:20 runtime_log.err
[2026-03-30 07:20:02] -rw------- 1 boinc boinc       657 Mar 30 07:20 oIdMDmaV4Q9n9Rq4apOajLDm4fhM0noT9bVoINGKDmlmMKDm7Znn0m.diag
[2026-03-30 07:20:02] -rw-r--r-- 1 boinc boinc     10999 Mar 30 07:20 stderr.txt
[2026-03-30 07:20:02] HITS file was successfully produced:
[2026-03-30 07:20:02] -rw------- 1 boinc boinc 189713404 Mar 30 07:19 shared/HITS.pool.root.1
[2026-03-30 07:20:02]  *** Contents of shared directory: ***
[2026-03-30 07:20:02] total 403988
[2026-03-30 07:20:02] -rw-r--r-- 2 boinc boinc 222432366 Mar 30 06:06 ATLAS.root_0
[2026-03-30 07:20:02] -rw-r--r-- 2 boinc boinc    597535 Mar 30 06:06 input.tar.gz
[2026-03-30 07:20:02] -rw-r--r-- 2 boinc boinc     15845 Mar 30 06:06 start_atlas.sh
[2026-03-30 07:20:02] -rw------- 1 boinc boinc 189713404 Mar 30 07:19 HITS.pool.root.1
[2026-03-30 07:20:02] -rw------- 1 boinc boinc    911360 Mar 30 07:20 result.tar.gz
07:20:04 (1926938): run_atlas exited; CPU time 15983.595632
07:20:04 (1926938): called boinc_finish(0)

</stderr_txt>
]]>

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