Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:08:52 (3250575): wrapper (7.7.26015): starting
07:08:52 (3250575): wrapper: running run_atlas (--nthreads 4)
[2026-04-03 07:08:52] Arguments: --nthreads 4
[2026-04-03 07:08:52] Threads: 4
[2026-04-03 07:08:52] Checking for CVMFS
[2026-04-03 07:08:52] No cvmfs_config command found, will try listing directly
[2026-04-03 07:08:52] CVMFS is ok
[2026-04-03 07:08:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 07:08:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 07:08:52] Further information can be found at the LHC@home message board.
[2026-04-03 07:08:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 07:08:52] Checking for apptainer binary...
[2026-04-03 07:08:52] which: no apptainer in ((null))
[2026-04-03 07:08:52] apptainer is not installed, using version from CVMFS
[2026-04-03 07:08:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 07:08:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-04-03 07:08:52] apptainer works
[2026-04-03 07:08:52] Set ATHENA_PROC_NUMBER=4
[2026-04-03 07:08:52] Set ATHENA_CORE_NUMBER=4
[2026-04-03 07:08:52] Starting ATLAS job with PandaID=7066429866
[2026-04-03 07:08:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 09:51:24]  *** The last 200 lines of the pilot log: ***
[2026-04-03 09:51:24] 2026-04-03 07:48:31,573 | INFO     | intersect: -3913046809.1615024
[2026-04-03 09:51:24] 2026-04-03 07:48:31,573 | INFO     | chi2: 0.002639285995019386
[2026-04-03 09:51:24] 2026-04-03 07:48:31,573 | INFO     | current chi2=0.002639285995019386 (change=99.80750896561523 %)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,573 | INFO     | sum of square deviations: 964976232.5
[2026-04-03 09:51:24] 2026-04-03 07:48:31,574 | INFO     | sum of deviations: 2592517080.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,574 | INFO     | mean x: 1775198023.5
[2026-04-03 09:51:24] 2026-04-03 07:48:31,574 | INFO     | mean y: 2323699.6438356163
[2026-04-03 09:51:24] 2026-04-03 07:48:31,574 | INFO     | intersect: -4766945263.989412
[2026-04-03 09:51:24] 2026-04-03 07:48:31,575 | INFO     | chi2: 0.000528124168068307
[2026-04-03 09:51:24] 2026-04-03 07:48:31,575 | INFO     | current chi2=0.000528124168068307 (change=79.98988479971729 %)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,575 | INFO     | sum of square deviations: 869188390.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,576 | INFO     | sum of deviations: 1974206867.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,576 | INFO     | mean x: 1775198176.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,576 | INFO     | mean y: 2324679.5531914895
[2026-04-03 09:51:24] 2026-04-03 07:48:31,576 | INFO     | intersect: -4029722307.803685
[2026-04-03 09:51:24] 2026-04-03 07:48:31,576 | INFO     | chi2: 0.0001990812784845937
[2026-04-03 09:51:24] 2026-04-03 07:48:31,576 | INFO     | current chi2=0.0001990812784845937 (change=62.30407723760054 %)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,577 | INFO     | sum of square deviations: 779958810.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,577 | INFO     | sum of deviations: 1585506509.9999998
[2026-04-03 09:51:24] 2026-04-03 07:48:31,577 | INFO     | mean x: 1775198328.5
[2026-04-03 09:51:24] 2026-04-03 07:48:31,578 | INFO     | mean y: 2325344.1911764704
[2026-04-03 09:51:24] 2026-04-03 07:48:31,578 | INFO     | intersect: -3606312022.6690917
[2026-04-03 09:51:24] 2026-04-03 07:48:31,578 | INFO     | chi2: 0.00011833188465008207
[2026-04-03 09:51:24] 2026-04-03 07:48:31,578 | INFO     | current chi2=0.00011833188465008207 (change=40.56101831833503 %)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,578 | INFO     | sum of square deviations: 697054930.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,579 | INFO     | sum of deviations: 1244275255.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,579 | INFO     | mean x: 1775198481.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,579 | INFO     | mean y: 2325970.6946564885
[2026-04-03 09:51:24] 2026-04-03 07:48:31,579 | INFO     | intersect: -3166485334.638035
[2026-04-03 09:51:24] 2026-04-03 07:48:31,580 | INFO     | chi2: 4.107144985414983e-05
[2026-04-03 09:51:24] 2026-04-03 07:48:31,580 | INFO     | current chi2=4.107144985414983e-05 (change=65.29130760014364 %)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,580 | INFO     | sum of square deviations: 620244187.5
[2026-04-03 09:51:24] 2026-04-03 07:48:31,581 | INFO     | sum of deviations: 1061082281.5
[2026-04-03 09:51:24] 2026-04-03 07:48:31,581 | INFO     | mean x: 1775198633.5
[2026-04-03 09:51:24] 2026-04-03 07:48:31,581 | INFO     | mean y: 2326332.912698413
[2026-04-03 09:51:24] 2026-04-03 07:48:31,581 | INFO     | intersect: -3034593406.298662
[2026-04-03 09:51:24] 2026-04-03 07:48:31,581 | INFO     | chi2: 3.05688637282433e-05
[2026-04-03 09:51:24] 2026-04-03 07:48:31,581 | INFO     | current chi2=3.05688637282433e-05 (change=25.571500794840706 %)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,582 | INFO     | sum of square deviations: 549294020.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,582 | INFO     | sum of deviations: 925519755.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,582 | INFO     | mean x: 1775198786.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,582 | INFO     | mean y: 2326624.479338843
[2026-04-03 09:51:24] 2026-04-03 07:48:31,582 | INFO     | intersect: -2988751897.5388284
[2026-04-03 09:51:24] 2026-04-03 07:48:31,583 | INFO     | chi2: 2.9922860991542662e-05
[2026-04-03 09:51:24] 2026-04-03 07:48:31,583 | INFO     | current chi2=2.9922860991542662e-05 (change=2.1132703604674155 %)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,583 | INFO     | left removable region: 70
[2026-04-03 09:51:24] 2026-04-03 07:48:31,583 | INFO     | sum of square deviations: 158737860.0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,583 | INFO     | sum of deviations: 307236351.5
[2026-04-03 09:51:24] 2026-04-03 07:48:31,583 | INFO     | mean x: 1775199670.5
[2026-04-03 09:51:24] 2026-04-03 07:48:31,583 | INFO     | mean y: 2327994.4375
[2026-04-03 09:51:24] 2026-04-03 07:48:31,584 | INFO     | intersect: -3433562283.7130446
[2026-04-03 09:51:24] 2026-04-03 07:48:31,584 | INFO     | chi2: 9.396820042537699e-06
[2026-04-03 09:51:24] 2026-04-03 07:48:31,584 | INFO     | current memory leak: 1.94 B/s (using 80 data points, chi2=0.00)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,584 | INFO     | could have reported an average CPU frequency of 2695 MHz (9 samples)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,584 | INFO     | ..............................
[2026-04-03 09:51:24] 2026-04-03 07:48:31,584 | INFO     | . Timing measurements:
[2026-04-03 09:51:24] 2026-04-03 07:48:31,584 | INFO     | . get job = 0 s
[2026-04-03 09:51:24] 2026-04-03 07:48:31,585 | INFO     | . initial setup = 8 s
[2026-04-03 09:51:24] 2026-04-03 07:48:31,585 | INFO     | . payload setup = 15 s
[2026-04-03 09:51:24] 2026-04-03 07:48:31,585 | INFO     | . stage-in = 0 s
[2026-04-03 09:51:24] 2026-04-03 07:48:31,585 | INFO     | . payload execution = 9519 s
[2026-04-03 09:51:24] 2026-04-03 07:48:31,585 | INFO     | . stage-out = 0 s
[2026-04-03 09:51:24] 2026-04-03 07:48:31,585 | INFO     | . log creation = 0 s
[2026-04-03 09:51:24] 2026-04-03 07:48:31,585 | INFO     | ..............................
[2026-04-03 09:51:24] 2026-04-03 07:48:31,672 | INFO     | 
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | job summary report
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | --------------------------------------------------
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | PanDA job id: 7066429866
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | task id: 49263208
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | errors: (none)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | pilot state: finished 
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | transexitcode: 0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | exeerrorcode: 0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | exeerrordiag: 
[2026-04-03 09:51:24] 2026-04-03 07:48:31,673 | INFO     | exitcode: 0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | exitmsg: OK
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | cpuconsumptiontime: 36490 s
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | nevents: 400
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | neventsw: 0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | pid: 3260813
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | pgrp: 3260813
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | corecount: 4
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | event service: False
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | sizes: {0: 2279825, 1: 2280286, 11: 2280286, 9538: 2309111, 9539: 2318133, 9541: 2318189, 9544: 2318575}
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | --------------------------------------------------
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | 
[2026-04-03 09:51:24] 2026-04-03 07:48:31,674 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/0
[2026-04-03 09:51:24] 2026-04-03 07:48:31,710 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,710 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,710 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,712 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,712 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,712 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 09:51:24] 2026-04-03 07:48:31,712 | INFO     | job 7066429866 has completed (purged errors)
[2026-04-03 09:51:24] 2026-04-03 07:48:31,712 | INFO     | overall cleanup function is called
[2026-04-03 09:51:24] 2026-04-03 07:48:32,722 | INFO     | --- collectZombieJob: --- 10, [3260813]
[2026-04-03 09:51:24] 2026-04-03 07:48:32,722 | INFO     | zombie collector waiting for pid 3260813
[2026-04-03 09:51:24] 2026-04-03 07:48:32,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 09:51:24] 2026-04-03 07:48:32,723 | INFO     | collected zombie processes
[2026-04-03 09:51:24] 2026-04-03 07:48:32,723 | INFO     | will attempt to kill all subprocesses of pid=3260813
[2026-04-03 09:51:24] 2026-04-03 07:48:33,541 | INFO     | process IDs to be killed: [3260813] (in reverse order)
[2026-04-03 09:51:24] 2026-04-03 07:48:33,861 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 09:51:24] 2026-04-03 07:48:33,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 09:51:24] 2026-04-03 07:48:33,894 | INFO     | did not find any defunct processes belonging to 3260813
[2026-04-03 09:51:24] 2026-04-03 07:48:33,922 | INFO     | did not find any defunct processes belonging to 3260813
[2026-04-03 09:51:24] 2026-04-03 07:48:33,922 | INFO     | ready for new job
[2026-04-03 09:51:24] 2026-04-03 07:48:33,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 09:51:24] 2026-04-03 07:48:33,925 | INFO     | **************************************
[2026-04-03 09:51:24] 2026-04-03 07:48:33,925 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 09:51:24] 2026-04-03 07:48:33,926 | INFO     | **************************************
[2026-04-03 09:51:24] 2026-04-03 07:48:33,926 | INFO     | 
[2026-04-03 09:51:24] 2026-04-03 07:48:33,934 | INFO     | architecture information:
[2026-04-03 09:51:24] 2026-04-03 07:48:33,935 | INFO     | executing command: cat /etc/os-release
[2026-04-03 09:51:24] 2026-04-03 07:48:33,961 | INFO     | cat /etc/os-release:
[2026-04-03 09:51:24] NAME="CentOS Linux"
[2026-04-03 09:51:24] VERSION="7 (Core)"
[2026-04-03 09:51:24] ID="centos"
[2026-04-03 09:51:24] ID_LIKE="rhel fedora"
[2026-04-03 09:51:24] VERSION_ID="7"
[2026-04-03 09:51:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 09:51:24] ANSI_COLOR="0;31"
[2026-04-03 09:51:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 09:51:24] HOME_URL="https://www.centos.org/"
[2026-04-03 09:51:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 09:51:24] 
[2026-04-03 09:51:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 09:51:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 09:51:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 09:51:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 09:51:24] 
[2026-04-03 09:51:24] 2026-04-03 07:48:33,962 | INFO     | **************************************
[2026-04-03 09:51:24] 2026-04-03 07:48:34,464 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/0
[2026-04-03 09:51:24] 2026-04-03 07:48:34,505 | INFO     | sufficient remaining disk space (288618446848 B)
[2026-04-03 09:51:24] 2026-04-03 07:48:34,506 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 09:51:24] 2026-04-03 07:48:34,506 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 09:51:24] 2026-04-03 07:48:34,506 | INFO     | update_server=False
[2026-04-03 09:51:24] 2026-04-03 07:48:34,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 09:51:24] 2026-04-03 07:48:34,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 09:51:24] 2026-04-03 07:48:34,507 | INFO     | aborting loop
[2026-04-03 09:51:24] 2026-04-03 07:48:34,514 | INFO     | all job control threads have been joined
[2026-04-03 09:51:24] 2026-04-03 07:48:35,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 09:51:24] 2026-04-03 07:48:35,091 | INFO     | all data control threads have been joined
[2026-04-03 09:51:24] 2026-04-03 07:48:35,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 09:51:24] 2026-04-03 07:48:35,512 | INFO     | [job] retrieve thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:35,512 | INFO     | [job] job monitor thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:35,520 | INFO     | [job] control thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:35,712 | INFO     | [job] validate thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:35,804 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:35,901 | INFO     | all payload control threads have been joined
[2026-04-03 09:51:24] 2026-04-03 07:48:36,096 | INFO     | [data] control thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:36,105 | INFO     | [payload] failed_post thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:36,162 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:36,178 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:36,558 | INFO     | [data] copytool_in thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:36,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 09:51:24] 2026-04-03 07:48:36,906 | INFO     | [payload] control thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:36,966 | INFO     | [payload] validate_post thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:37,471 | INFO     | [data] copytool_out thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:37,689 | INFO     | [job] queue monitor thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:39,007 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:48:45,459 | INFO     | job.realtimelogging is not enabled
[2026-04-03 09:51:24] 2026-04-03 07:48:46,464 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 09:51:24] 2026-04-03 07:49:04,857 | INFO     | PID=3254996 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-03 09:51:24] 2026-04-03 07:49:04,857 | INFO     | .. there are 18 such processes running
[2026-04-03 09:51:24] 2026-04-03 07:49:04,858 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 09:51:24] 2026-04-03 07:49:04,858 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 09:51:24] 2026-04-03 07:49:04,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 09:51:24] 2026-04-03 07:49:31,847 | INFO     | [monitor] cgroup control has ended
[2026-04-03 09:51:24] 2026-04-03 07:49:32,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22952791172928)>', '<ExcThread(monitor, started 22952554018560)>']
[2026-04-03 09:51:24] 2026-04-03 07:49:32,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 09:51:24] 2026-04-03 07:49:32,991 | INFO     | [monitor] control thread has ended
[2026-04-03 09:51:24] 2026-04-03 07:49:37,158 | INFO     | all workflow threads have been joined
[2026-04-03 09:51:24] 2026-04-03 07:49:37,158 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 09:51:24] 2026-04-03 07:49:37,158 | INFO     | traces error code: 0
[2026-04-03 09:51:24] 2026-04-03 07:49:37,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 09:51:24] 2026-04-03 07:49:37,306 [wrapper] ==== pilot stdout END ====
[2026-04-03 09:51:24] 2026-04-03 07:49:37,310 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 09:51:24] 2026-04-03 07:49:37,315 [wrapper] pilotpid: 3254996
[2026-04-03 09:51:24] 2026-04-03 07:49:37,318 [wrapper] Pilot exit status: 0
[2026-04-03 09:51:24] 2026-04-03 07:49:37,334 [wrapper] pandaids: 7066429866
[2026-04-03 09:51:24] 2026-04-03 07:49:37,551 [wrapper] cleanup supervisor_pilot 3538296 3254997
[2026-04-03 09:51:24] 2026-04-03 07:49:37,555 [wrapper] Test setup, not cleaning
[2026-04-03 09:51:24] 2026-04-03 07:49:37,559 [wrapper] apfmon messages muted
[2026-04-03 09:51:24] 2026-04-03 07:49:37,563 [wrapper] ==== wrapper stdout END ====
[2026-04-03 09:51:24] 2026-04-03 07:49:37,567 [wrapper] ==== wrapper stderr END ====
[2026-04-03 09:51:24]  *** Error codes and diagnostics ***
[2026-04-03 09:51:24]     "exeErrorCode": 0,
[2026-04-03 09:51:24]     "exeErrorDiag": "",
[2026-04-03 09:51:24]     "pilotErrorCode": 0,
[2026-04-03 09:51:24]     "pilotErrorDiag": "",
[2026-04-03 09:51:24]  *** Listing of results directory ***
[2026-04-03 09:51:24] total 413808
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc    585013 Mar 29 10:23 pilot3.tar.gz
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc      5118 Mar 29 10:23 queuedata.json
[2026-04-03 09:51:24] -rwx------. 1 boinc boinc     36322 Mar 29 10:24 runpilot2-wrapper.sh
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc       100 Apr  3 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 09:51:24] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 07:08 run_atlas
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc       105 Apr  3 07:08 job.xml
[2026-04-03 09:51:24] -rw-r--r--. 2 boinc boinc 221768825 Apr  3 07:08 EVNT.49263206._000029.pool.root.1
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc      6624 Apr  3 07:08 init_data.xml
[2026-04-03 09:51:24] -rw-r--r--. 2 boinc boinc     15845 Apr  3 07:08 start_atlas.sh
[2026-04-03 09:51:24] drwxrwx--x. 2 boinc boinc      4096 Apr  3 07:08 shared
[2026-04-03 09:51:24] -rw-r--r--. 2 boinc boinc    597519 Apr  3 07:08 input.tar.gz
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc         0 Apr  3 07:08 boinc_lockfile
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc      2572 Apr  3 07:08 pandaJob.out
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc   1005167 Apr  3 07:09 agis_schedconf.cvmfs.json
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc   1511579 Apr  3 07:09 agis_ddmendpoints.agis.ALL.json
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc       444 Apr  3 07:09 workernode_map.json
[2026-04-03 09:51:24] drwx------. 5 boinc boinc      4096 Apr  3 07:09 pilot3
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc 194668119 Apr  3 09:47 HITS.49263208._001161.pool.root.1
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc       530 Apr  3 09:47 boinc_task_state.xml
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc      1026 Apr  3 09:48 memory_monitor_summary.json
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc    337379 Apr  3 09:48 log.49263208._001161.job.log.tgz.1
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc      6347 Apr  3 09:48 heartbeat.json
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc        95 Apr  3 09:49 pilot_heartbeat.json
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc      4904 Apr  3 09:49 pilotlog.txt
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc   1347240 Apr  3 09:49 log.49263208._001161.job.log.1
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc       357 Apr  3 09:49 output.list
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc       620 Apr  3 09:49 runtime_log
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc   1699840 Apr  3 09:49 result.tar.gz
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc      9221 Apr  3 09:49 runtime_log.err
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc       662 Apr  3 09:49 QmiLDmJc0Q9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmG2JKDmwPyPFo.diag
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc        27 Apr  3 09:50 wrapper_checkpoint.txt
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc      8192 Apr  3 09:51 boinc_mmap_file
[2026-04-03 09:51:24] -rw-r--r--. 1 boinc boinc     20715 Apr  3 09:51 stderr.txt
[2026-04-03 09:51:24] HITS file was successfully produced:
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc 194668119 Apr  3 09:47 shared/HITS.pool.root.1
[2026-04-03 09:51:24]  *** Contents of shared directory: ***
[2026-04-03 09:51:24] total 408948
[2026-04-03 09:51:24] -rw-r--r--. 2 boinc boinc 221768825 Apr  3 07:08 ATLAS.root_0
[2026-04-03 09:51:24] -rw-r--r--. 2 boinc boinc     15845 Apr  3 07:08 start_atlas.sh
[2026-04-03 09:51:24] -rw-r--r--. 2 boinc boinc    597519 Apr  3 07:08 input.tar.gz
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc 194668119 Apr  3 09:47 HITS.pool.root.1
[2026-04-03 09:51:24] -rw-------. 1 boinc boinc   1699840 Apr  3 09:49 result.tar.gz
09:51:25 (3250575): run_atlas exited; CPU time 37114.206760
09:51:25 (3250575): called boinc_finish(0)

</stderr_txt>
]]>

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