Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-29 11:51:07 (1168): vboxwrapper version 26210
2026-03-29 11:51:07 (1168): BOINC client version: 7.16.11
2026-03-29 11:51:08 (1168): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-03-29 11:51:08 (1168): Successfully copied 'init_data.xml' to the shared directory.
2026-03-29 11:51:09 (1168): Create VM. (boinc_7168548530b93cfe, slot#1)
2026-03-29 11:51:09 (1168): Setting Memory Size for VM. (4300MB)
2026-03-29 11:51:09 (1168): Setting CPU Count for VM. (3)
2026-03-29 11:51:10 (1168): Setting Chipset Options for VM.
2026-03-29 11:51:10 (1168): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-29 11:51:10 (1168): Setting Boot Options for VM.
2026-03-29 11:51:11 (1168): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-29 11:51:11 (1168): Enabling VM Network Access.
2026-03-29 11:51:11 (1168): Disabling USB Support for VM.
2026-03-29 11:51:11 (1168): Disabling COM Port Support for VM.
2026-03-29 11:51:12 (1168): Disabling LPT Port Support for VM.
2026-03-29 11:51:12 (1168): Disabling Audio Support for VM.
2026-03-29 11:51:12 (1168): Disabling Clipboard Support for VM.
2026-03-29 11:51:13 (1168): Disabling Drag and Drop Support for VM.
2026-03-29 11:51:13 (1168): Adding storage controller(s) to VM.
2026-03-29 11:51:13 (1168): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-29 11:51:14 (1168): Adding VirtualBox Guest Additions to VM.
2026-03-29 11:51:14 (1168): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-29 11:51:15 (1168): forwarding host port 51937 to guest port 80
2026-03-29 11:51:15 (1168): Enabling remote desktop for VM.
2026-03-29 11:51:15 (1168): Required extension pack not installed, remote desktop not enabled.
2026-03-29 11:51:15 (1168): Enabling shared directory for VM.
2026-03-29 11:51:16 (1168): Starting VM using VBoxManage interface. (boinc_7168548530b93cfe, slot#1)
2026-03-29 11:51:19 (1168): Successfully started VM. (PID = '6272')
2026-03-29 11:51:19 (1168): Reporting VM Process ID to BOINC.
2026-03-29 11:51:19 (1168): Guest Log: BIOS: VirtualBox 6.1.12
2026-03-29 11:51:19 (1168): Guest Log: CPUID EDX: 0x178bfbff
2026-03-29 11:51:19 (1168): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-29 11:51:19 (1168): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-29 11:51:19 (1168): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-29 11:51:19 (1168): Detected: Web Application Enabled (http://localhost:51937)
2026-03-29 11:51:19 (1168): Preference change detected
2026-03-29 11:51:19 (1168): Setting CPU throttle for VM. (100%)
2026-03-29 11:51:19 (1168): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-29 11:51:21 (1168): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-29 11:51:21 (1168): Guest Log: BIOS: Booting from Hard Disk...
2026-03-29 11:51:24 (1168): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-29 11:51:24 (1168): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-29 11:51:24 (1168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-29 11:51:28 (1168): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-29 11:51:28 (1168): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-29 11:51:34 (1168): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-29 11:51:34 (1168): Guest Log: 00:00:00.000133 main     Log opened 2026-03-29T11:51:32.818184000Z
2026-03-29 11:51:34 (1168): Guest Log: 00:00:00.000220 main     OS Product: Linux
2026-03-29 11:51:34 (1168): Guest Log: 00:00:00.000241 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-29 11:51:34 (1168): Guest Log: 00:00:00.000258 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-29 11:51:34 (1168): Guest Log: 00:00:00.000275 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-29 11:51:34 (1168): Guest Log: 00:00:00.000275 main     Process ID: 1289
2026-03-29 11:51:34 (1168): Guest Log: 00:00:00.000276 main     Package type: LINUX_64BITS_GENERIC
2026-03-29 11:51:34 (1168): Guest Log: 00:00:00.000825 main     5.2.32 r132073 started. Verbose level = 0
2026-03-29 11:51:34 (1168): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-29 11:51:34 (1168): Guest Log: [INFO] Mounting shared directory
2026-03-29 11:51:34 (1168): Guest Log: [INFO] Checking for init_data.xml
2026-03-29 11:51:37 (1168): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-29 11:51:37 (1168): Guest Log: [INFO] Detected branch: prod
2026-03-29 11:51:37 (1168): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-29 11:51:37 (1168): Guest Log: Copying input files
2026-03-29 11:51:40 (1168): Guest Log: Copied input files into RunAtlas.
2026-03-29 11:51:40 (1168): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-29 11:51:40 (1168): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-29 11:51:40 (1168): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-29 11:51:40 (1168): Guest Log: Further information can be found at the LHC@home message board.
2026-03-29 11:51:44 (1168): Guest Log: 00:00:10.009692 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 590 357 000ns (GuestNow=1 774 777 904 230 165 000 ns GuestLast=1 774 785 092 820 522 000 ns fSetTimeLastLoop=true )
2026-03-29 11:52:46 (1168): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-29 11:52:46 (1168): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-29 11:52:46 (1168): Guest Log: 2.6.3.0 1565 1 32200 157837 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-29 11:52:48 (1168): Guest Log: copied the webapp to /var/www
2026-03-29 11:52:48 (1168): Guest Log: ATHENA_PROC_NUMBER=3
2026-03-29 11:52:48 (1168): Guest Log: ATHENA_CORE_NUMBER=3
2026-03-29 11:52:48 (1168): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-29 11:52:48 (1168): Guest Log:  *** Starting ATLAS job. (PandaID=7073144533 taskID=48967102) ***
2026-03-29 13:33:30 (1168): Status Report: Elapsed Time: '6000.222290'
2026-03-29 13:33:30 (1168): Status Report: CPU Time: '17181.750000'
2026-03-29 15:14:12 (1168): Status Report: Elapsed Time: '12000.222290'
2026-03-29 15:14:12 (1168): Status Report: CPU Time: '35283.593750'
2026-03-29 15:41:16 (1168): Guest Log:  *** Job finished ***
2026-03-29 15:41:16 (1168): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:02,416 | INFO     | all workflow threads have been joined
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:02,417 | INFO     | end of generic workflow (traces error code: 0)
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:02,417 | INFO     | traces error code: 0
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:02,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,593 | INFO     | PID=5969 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,594 | INFO     | found 0 job(s) in 20 queues
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,594 | INFO     | [monitor] control thread has ended
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,710 [wrapper] ==== pilot stdout END ====
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,715 [wrapper] ==== wrapper stdout RESUME ====
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,719 [wrapper] pilotpid: 5969
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,723 [wrapper] Pilot exit status: 0
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,815 [wrapper] pandaids: 7073144533
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,846 [wrapper] cleanup supervisor_pilot 27737 5970
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,850 [wrapper] Test setup, not cleaning
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,855 [wrapper] apfmon messages muted
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,860 [wrapper] ==== wrapper stdout END ====
2026-03-29 15:41:16 (1168): Guest Log: 2026-03-29 13:41:09,864 [wrapper] ==== wrapper stderr END ====
2026-03-29 15:41:16 (1168): Guest Log:  *** Error codes and diagnostics ***
2026-03-29 15:41:16 (1168): Guest Log:     "exeErrorCode": 0,
2026-03-29 15:41:16 (1168): Guest Log:     "exeErrorDiag": "",
2026-03-29 15:41:16 (1168): Guest Log:     "pilotErrorCode": 0,
2026-03-29 15:41:16 (1168): Guest Log:     "pilotErrorDiag": "",
2026-03-29 15:41:16 (1168): Guest Log:  *** Listing of results directory ***
2026-03-29 15:41:16 (1168): Guest Log: total 197592
2026-03-29 15:41:16 (1168): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 29 06:35 runpilot2-wrapper.sh
2026-03-29 15:41:16 (1168): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 29 06:35 pilot3.tar.gz
2026-03-29 15:41:16 (1168): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Mar 29 06:35 queuedata.json
2026-03-29 15:41:16 (1168): Guest Log: -rwxr-xr-x. 1 atlas atlas      8838 Mar 29 09:51 init_data.xml
2026-03-29 15:41:16 (1168): Guest Log: -rwxr-xr-x. 1 atlas atlas    597529 Mar 29 09:51 input.tar.gz
2026-03-29 15:41:16 (1168): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 29 09:51 start_atlas.sh
2026-03-29 15:41:16 (1168): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 29 09:51 EVNT.48967100._000182.pool.root.1 -> /data/./ATLAS.root_0
2026-03-29 15:41:16 (1168): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Mar 29 09:52 pandaJob.out
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas   1003389 Mar 29 09:53 agis_schedconf.cvmfs.json
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas       424 Mar 29 09:53 workernode_map.json
2026-03-29 15:41:16 (1168): Guest Log: drwx------. 5 atlas atlas      4096 Mar 29 09:53 pilot3
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas 193855586 Mar 29 13:40 HITS.48967102._007388.pool.root.1
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas      1028 Mar 29 13:40 memory_monitor_summary.json
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 29 13:40 agis_ddmendpoints.agis.ALL.json
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas    389747 Mar 29 13:40 log.48967102._007388.job.log.tgz.1
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas      6365 Mar 29 13:40 heartbeat.json
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas       744 Mar 29 13:41 pilotlog.txt
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas        95 Mar 29 13:41 pilot_heartbeat.json
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas   1918242 Mar 29 13:41 log.48967102._007388.job.log.1
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas       357 Mar 29 13:41 output.list
2026-03-29 15:41:16 (1168): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 29 13:41 runtime_log
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas   2324480 Mar 29 13:41 result.tar.gz
2026-03-29 15:41:16 (1168): Guest Log: -rw-r--r--. 1 atlas atlas      8746 Mar 29 13:41 runtime_log.err
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas       655 Mar 29 13:41 FjRLDmMvyQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmunJKDmM0mGLm.diag
2026-03-29 15:41:16 (1168): Guest Log: Looking for outputfile HITS.48967102._007388.pool.root.1
2026-03-29 15:41:16 (1168): Guest Log: HITS file was successfully produced
2026-03-29 15:41:16 (1168): Guest Log: -rw-------. 1 atlas atlas 193855586 Mar 29 13:40 /home/atlas/RunAtlas/HITS.48967102._007388.pool.root.1
2026-03-29 15:41:17 (1168): Guest Log: Successfully finished the ATLAS job!
2026-03-29 15:41:17 (1168): Guest Log: Copying the results back to the shared directory!
2026-03-29 15:41:17 (1168): Guest Log:  *** Contents of shared directory: ***
2026-03-29 15:41:17 (1168): Guest Log: total 401152
2026-03-29 15:41:17 (1168): Guest Log: -rwxrwxrwx. 1 root root 213965397 Mar 29 09:51 ATLAS.root_0
2026-03-29 15:41:17 (1168): Guest Log: -rwxrwxrwx. 1 root root 193855586 Mar 29  2026 HITS.pool.root.1
2026-03-29 15:41:17 (1168): Guest Log: -rwxrwxrwx. 1 root root      8838 Mar 29 09:51 init_data.xml
2026-03-29 15:41:17 (1168): Guest Log: -rwxrwxrwx. 1 root root    597529 Mar 29 09:45 input.tar.gz
2026-03-29 15:41:17 (1168): Guest Log: -rwxrwxrwx. 1 root root   2324480 Mar 29  2026 result.tar.gz
2026-03-29 15:41:17 (1168): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 29 09:45 start_atlas.sh
2026-03-29 15:41:17 (1168): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-29 15:41:17 (1168): VM Completion File Detected.
2026-03-29 15:41:17 (1168): Powering off VM.
2026-03-29 15:41:18 (1168): Successfully stopped VM.
2026-03-29 15:41:18 (1168): Deregistering VM. (boinc_7168548530b93cfe, slot#1)
2026-03-29 15:41:18 (1168): Removing network bandwidth throttle group from VM.
2026-03-29 15:41:19 (1168): Removing VM from VirtualBox.
2026-03-29 15:41:24 (1168): called boinc_finish(0)

</stderr_txt>
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