Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:51:46 (57796): wrapper (7.7.26015): starting
06:51:46 (57796): wrapper: running run_atlas (--nthreads 8)
[2026-03-29 06:51:46] Arguments: --nthreads 8
[2026-03-29 06:51:46] Threads: 8
[2026-03-29 06:51:46] Checking for CVMFS
[2026-03-29 06:51:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 06:51:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 06:51:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 06:51:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 06:51:47] 2.13.3.0 4068818 472 48772 157830 0 50 3695612 4096000 0 130560 0 497101 99.992 20399 884 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-29 06:51:47] CVMFS is ok
[2026-03-29 06:51:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 06:51:47] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-29 06:51:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-29 06:51:47] Further information can be found at the LHC@home message board.
[2026-03-29 06:51:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 06:51:47] Checking for apptainer binary...
[2026-03-29 06:51:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-29 06:51:47] Running /usr/bin/apptainer --version
[2026-03-29 06:51:47] apptainer version 1.4.5
[2026-03-29 06:51:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 06:51:47] Ryzen-9-7950X3D-Zen4-Ubu24
[2026-03-29 06:51:47] apptainer works
[2026-03-29 06:51:47] Set ATHENA_PROC_NUMBER=8
[2026-03-29 06:51:47] Set ATHENA_CORE_NUMBER=8
[2026-03-29 06:51:47] Starting ATLAS job with PandaID=7072015274
[2026-03-29 06:51:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 07:44:28]  *** The last 200 lines of the pilot log: ***
[2026-03-29 07:44:28]  guid=80eff26c-acf4-4313-b9ab-ebbff5cbda85
[2026-03-29 07:44:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-29 07:44:28]  is_altstaged=None
[2026-03-29 07:44:28]  is_tar=False
[2026-03-29 07:44:28]  lfn=log.48967094._018568.job.log.tgz.1
[2026-03-29 07:44:28]  mtime=0
[2026-03-29 07:44:28]  protocol_id=None
[2026-03-29 07:44:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-29 07:44:28]  replicas=None
[2026-03-29 07:44:28]  scope=mc23_13p6TeV
[2026-03-29 07:44:28]  status=None
[2026-03-29 07:44:28]  status_code=0
[2026-03-29 07:44:28]  storage_token=
[2026-03-29 07:44:28]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7072015274/log.48967094._018568.job.log.tgz.1
[2026-03-29 07:44:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/6b/log.48967094._018568.job.log.tgz.1
[2026-03-29 07:44:28]  workdir=None
[2026-03-29 07:44:28] ]
[2026-03-29 07:44:28] 2026-03-29 05:43:54,986 | INFO     | transferring file log.48967094._018568.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7072015274/log.48967094._018568.job.log.tgz.1 to /var/lib/boinc
[2026-03-29 07:44:28] 2026-03-29 05:43:54,986 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7072015274/log.48967094._018568.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.489670
[2026-03-29 07:44:28] 2026-03-29 05:43:55,005 | INFO     | adding to output.list: log.48967094._018568.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/6b/log.48967094._018568.job.log.tg
[2026-03-29 07:44:28] 2026-03-29 05:43:55,005 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-29 07:44:28] 2026-03-29 05:43:55,005 | INFO     | summary of transferred files:
[2026-03-29 07:44:28] 2026-03-29 05:43:55,005 | INFO     |  -- lfn=log.48967094._018568.job.log.tgz.1, status_code=0, status=transferred
[2026-03-29 07:44:28] 2026-03-29 05:43:55,005 | INFO     | stage-out finished correctly
[2026-03-29 07:44:28] 2026-03-29 05:43:55,041 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-29 07:44:28] 2026-03-29 05:43:55,656 | INFO     | time since job start (3110s) is within the limit (345600.0s)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,042 | INFO     | job 7072015274 has state=finished
[2026-03-29 07:44:28] 2026-03-29 05:43:56,042 | INFO     | preparing for final server update for job 7072015274 in state='finished'
[2026-03-29 07:44:28] 2026-03-29 05:43:56,042 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7072015274/jobReport.json
[2026-03-29 07:44:28] 2026-03-29 05:43:56,043 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-29 07:44:28] 2026-03-29 05:43:56,043 | INFO     | this job has now completed (state=finished)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,043 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,043 | INFO     | log transfer has been attempted: DONE
[2026-03-29 07:44:28] 2026-03-29 05:43:56,043 | INFO     | job 7072015274 has finished - writing final server update
[2026-03-29 07:44:28] 2026-03-29 05:43:56,043 | INFO     | total number of processed events: 400 (read)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,045 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7072015274/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,045 | INFO     | extracted standard info from prmon json
[2026-03-29 07:44:28] 2026-03-29 05:43:56,045 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 07:44:28] 2026-03-29 05:43:56,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 07:44:28] 2026-03-29 05:43:56,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 07:44:28] 2026-03-29 05:43:56,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 07:44:28] 2026-03-29 05:43:56,046 | INFO     | fitting pss+swap vs Time
[2026-03-29 07:44:28] 2026-03-29 05:43:56,046 | INFO     | sum of square deviations: 26400495.0
[2026-03-29 07:44:28] 2026-03-29 05:43:56,046 | INFO     | sum of deviations: -5916148500.999999
[2026-03-29 07:44:28] 2026-03-29 05:43:56,046 | INFO     | mean x: 1774761563.5
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | mean y: 2760996.909090909
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | intersect: 397713219211.15625
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | chi2: 0.06755495522486828
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | current memory leak: -224.09 B/s (using 44 data points, chi2=0.07)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | could have reported an average CPU frequency of 4422 MHz (5 samples)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | ..............................
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | . Timing measurements:
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | . get job = 0 s
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | . initial setup = 5 s
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | . payload setup = 7 s
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | . stage-in = 0 s
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | . payload execution = 3086 s
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | . stage-out = 0 s
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | . log creation = 0 s
[2026-03-29 07:44:28] 2026-03-29 05:43:56,047 | INFO     | ..............................
[2026-03-29 07:44:28] 2026-03-29 05:43:56,091 | INFO     | 
[2026-03-29 07:44:28] 2026-03-29 05:43:56,091 | INFO     | job summary report
[2026-03-29 07:44:28] 2026-03-29 05:43:56,091 | INFO     | --------------------------------------------------
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | PanDA job id: 7072015274
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | task id: 48967094
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | errors: (none)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | pilot state: finished 
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | transexitcode: 0
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | exeerrorcode: 0
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | exeerrordiag: 
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | exitcode: 0
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | exitmsg: OK
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | cpuconsumptiontime: 23359 s
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | nevents: 400
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | neventsw: 0
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | pid: 66625
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | pgrp: 66625
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | corecount: 8
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | event service: False
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | sizes: {0: 2280235, 10: 2280235, 3098: 2305772, 3099: 2314840, 3100: 2315010}
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | --------------------------------------------------
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | 
[2026-03-29 07:44:28] 2026-03-29 05:43:56,092 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | job 7072015274 has completed (purged errors)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,112 | INFO     | overall cleanup function is called
[2026-03-29 07:44:28] 2026-03-29 05:43:56,705 | WARNING  | process 66625 can no longer be monitored (due to stat problems) - aborting
[2026-03-29 07:44:28] 2026-03-29 05:43:56,740 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 07:44:28] 2026-03-29 05:43:56,785 | INFO     | number of running child processes to parent process 66625: 1
[2026-03-29 07:44:28] 2026-03-29 05:43:56,785 | INFO     | maximum number of monitored processes: 6
[2026-03-29 07:44:28] 2026-03-29 05:43:56,785 | INFO     | aborting job monitoring since job object (job id=7072015274) has expired
[2026-03-29 07:44:28] 2026-03-29 05:43:57,118 | INFO     | --- collectZombieJob: --- 10, [66625]
[2026-03-29 07:44:28] 2026-03-29 05:43:57,118 | INFO     | zombie collector waiting for pid 66625
[2026-03-29 07:44:28] 2026-03-29 05:43:57,118 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 07:44:28] 2026-03-29 05:43:57,118 | INFO     | collected zombie processes
[2026-03-29 07:44:28] 2026-03-29 05:43:57,119 | INFO     | will attempt to kill all subprocesses of pid=66625
[2026-03-29 07:44:28] 2026-03-29 05:43:57,163 | INFO     | process IDs to be killed: [66625] (in reverse order)
[2026-03-29 07:44:28] 2026-03-29 05:43:57,208 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 07:44:28] 2026-03-29 05:43:57,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 07:44:28] 2026-03-29 05:43:57,210 | INFO     | did not find any defunct processes belonging to 66625
[2026-03-29 07:44:28] 2026-03-29 05:43:57,212 | INFO     | did not find any defunct processes belonging to 66625
[2026-03-29 07:44:28] 2026-03-29 05:43:57,212 | INFO     | ready for new job
[2026-03-29 07:44:28] 2026-03-29 05:43:57,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 07:44:28] 2026-03-29 05:43:57,213 | INFO     | **************************************
[2026-03-29 07:44:28] 2026-03-29 05:43:57,213 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 07:44:28] 2026-03-29 05:43:57,213 | INFO     | **************************************
[2026-03-29 07:44:28] 2026-03-29 05:43:57,213 | INFO     | 
[2026-03-29 07:44:28] 2026-03-29 05:43:57,214 | INFO     | architecture information:
[2026-03-29 07:44:28] 2026-03-29 05:43:57,214 | INFO     | executing command: cat /etc/os-release
[2026-03-29 07:44:28] 2026-03-29 05:43:57,233 | INFO     | cat /etc/os-release:
[2026-03-29 07:44:28] NAME="CentOS Linux"
[2026-03-29 07:44:28] VERSION="7 (Core)"
[2026-03-29 07:44:28] ID="centos"
[2026-03-29 07:44:28] ID_LIKE="rhel fedora"
[2026-03-29 07:44:28] VERSION_ID="7"
[2026-03-29 07:44:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 07:44:28] ANSI_COLOR="0;31"
[2026-03-29 07:44:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 07:44:28] HOME_URL="https://www.centos.org/"
[2026-03-29 07:44:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 07:44:28] 
[2026-03-29 07:44:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 07:44:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 07:44:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 07:44:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 07:44:28] 
[2026-03-29 07:44:28] 2026-03-29 05:43:57,233 | INFO     | **************************************
[2026-03-29 07:44:28] 2026-03-29 05:43:57,736 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-29 07:44:28] 2026-03-29 05:43:57,757 | INFO     | sufficient remaining disk space (1766345146368 B)
[2026-03-29 07:44:28] 2026-03-29 05:43:57,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 07:44:28] 2026-03-29 05:43:57,757 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 07:44:28] 2026-03-29 05:43:57,757 | INFO     | update_server=False
[2026-03-29 07:44:28] 2026-03-29 05:43:57,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 07:44:28] 2026-03-29 05:43:57,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 07:44:28] 2026-03-29 05:43:57,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 07:44:28] 2026-03-29 05:43:57,758 | INFO     | will abort loop
[2026-03-29 07:44:28] 2026-03-29 05:43:57,902 | INFO     | all data control threads have been joined
[2026-03-29 07:44:28] 2026-03-29 05:43:58,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 07:44:28] 2026-03-29 05:43:58,114 | INFO     | all payload control threads have been joined
[2026-03-29 07:44:28] 2026-03-29 05:43:58,762 | INFO     | [job] queue monitor thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:43:58,763 | INFO     | [job] retrieve thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:43:58,763 | INFO     | [job] job monitor thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:43:58,908 | INFO     | [data] control thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:43:59,119 | INFO     | [payload] control thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:43:59,360 | INFO     | all job control threads have been joined
[2026-03-29 07:44:28] 2026-03-29 05:43:59,433 | INFO     | [payload] failed_post thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:43:59,500 | INFO     | [job] validate thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:43:59,586 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:43:59,662 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:43:59,798 | INFO     | [data] copytool_in thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:43:59,809 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:44:00,053 | INFO     | [data] copytool_out thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:44:00,145 | INFO     | [payload] validate_post thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:44:00,273 | INFO     | job.realtimelogging is not enabled
[2026-03-29 07:44:28] 2026-03-29 05:44:00,366 | INFO     | [job] control thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:44:01,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 07:44:28] 2026-03-29 05:44:01,278 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:44:05,100 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 07:44:28] 2026-03-29 05:44:10,395 | INFO     | [monitor] cgroup control has ended
[2026-03-29 07:44:28] 2026-03-29 05:44:10,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126748405983040)>', '<ExcThread(monitor, started 126748124788480)>']
[2026-03-29 07:44:28] 2026-03-29 05:44:15,615 | INFO     | all workflow threads have been joined
[2026-03-29 07:44:28] 2026-03-29 05:44:15,615 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 07:44:28] 2026-03-29 05:44:15,615 | INFO     | traces error code: 0
[2026-03-29 07:44:28] 2026-03-29 05:44:15,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 07:44:28] 2026-03-29 05:44:28,781 | INFO     | PID=62009 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-29 07:44:28] 2026-03-29 05:44:28,784 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 07:44:28] 2026-03-29 05:44:28,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 07:44:28] 2026-03-29 05:44:28,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 07:44:28] 2026-03-29 05:44:28,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 07:44:28] 2026-03-29 05:44:28,784 | INFO     | [monitor] control thread has ended
[2026-03-29 07:44:28] 2026-03-29 05:44:28,850 [wrapper] ==== pilot stdout END ====
[2026-03-29 07:44:28] 2026-03-29 05:44:28,854 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 07:44:28] 2026-03-29 05:44:28,856 [wrapper] pilotpid: 62009
[2026-03-29 07:44:28] 2026-03-29 05:44:28,858 [wrapper] Pilot exit status: 0
[2026-03-29 07:44:28] 2026-03-29 05:44:28,871 [wrapper] pandaids: 7072015274
[2026-03-29 07:44:28] 2026-03-29 05:44:28,894 [wrapper] cleanup supervisor_pilot   76976 62010
[2026-03-29 07:44:28] 2026-03-29 05:44:28,901 [wrapper] Test setup, not cleaning
[2026-03-29 07:44:28] 2026-03-29 05:44:28,904 [wrapper] apfmon messages muted
[2026-03-29 07:44:28] 2026-03-29 05:44:28,909 [wrapper] ==== wrapper stdout END ====
[2026-03-29 07:44:28] 2026-03-29 05:44:28,911 [wrapper] ==== wrapper stderr END ====
[2026-03-29 07:44:28]  *** Error codes and diagnostics ***
[2026-03-29 07:44:28]     "exeErrorCode": 0,
[2026-03-29 07:44:28]     "exeErrorDiag": "",
[2026-03-29 07:44:28]     "pilotErrorCode": 0,
[2026-03-29 07:44:28]     "pilotErrorDiag": "",
[2026-03-29 07:44:28]  *** Listing of results directory ***
[2026-03-29 07:44:28] total 423628
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc    585013 Mar 29 00:20 pilot3.tar.gz
[2026-03-29 07:44:28] -rwx------ 1 boinc boinc     36322 Mar 29 00:20 runpilot2-wrapper.sh
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc      5118 Mar 29 00:21 queuedata.json
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc       100 Mar 29 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 07:44:28] -rwxr-xr-x 1 boinc boinc      7986 Mar 29 06:51 run_atlas
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc       105 Mar 29 06:51 job.xml
[2026-03-29 07:44:28] -rw-r--r-- 2 boinc boinc 218764317 Mar 29 06:51 EVNT.48967092._000466.pool.root.1
[2026-03-29 07:44:28] -rw-r--r-- 2 boinc boinc     15845 Mar 29 06:51 start_atlas.sh
[2026-03-29 07:44:28] drwxrwx--x 2 boinc boinc      4096 Mar 29 06:51 shared
[2026-03-29 07:44:28] -rw-r--r-- 2 boinc boinc    597544 Mar 29 06:51 input.tar.gz
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc         0 Mar 29 06:51 boinc_lockfile
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc      2600 Mar 29 06:51 pandaJob.out
[2026-03-29 07:44:28] -rw------- 1 boinc boinc   1003381 Mar 29 06:52 agis_schedconf.cvmfs.json
[2026-03-29 07:44:28] -rw------- 1 boinc boinc   1511579 Mar 29 06:52 agis_ddmendpoints.agis.ALL.json
[2026-03-29 07:44:28] -rw------- 1 boinc boinc       440 Mar 29 06:52 workernode_map.json
[2026-03-29 07:44:28] drwx------ 5 boinc boinc      4096 Mar 29 06:52 pilot3
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc      9536 Mar 29 07:43 init_data.xml
[2026-03-29 07:44:28] -rw------- 1 boinc boinc 209570175 Mar 29 07:43 HITS.48967094._018568.pool.root.1
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc       529 Mar 29 07:43 boinc_task_state.xml
[2026-03-29 07:44:28] -rw------- 1 boinc boinc      1024 Mar 29 07:43 memory_monitor_summary.json
[2026-03-29 07:44:28] -rw------- 1 boinc boinc    288487 Mar 29 07:43 log.48967094._018568.job.log.tgz.1
[2026-03-29 07:44:28] -rw------- 1 boinc boinc      6349 Mar 29 07:43 heartbeat.json
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc      8192 Mar 29 07:44 boinc_mmap_file
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc        27 Mar 29 07:44 wrapper_checkpoint.txt
[2026-03-29 07:44:28] -rw------- 1 boinc boinc       745 Mar 29 07:44 pilotlog.txt
[2026-03-29 07:44:28] -rw------- 1 boinc boinc        95 Mar 29 07:44 pilot_heartbeat.json
[2026-03-29 07:44:28] -rw------- 1 boinc boinc    477101 Mar 29 07:44 log.48967094._018568.job.log.1
[2026-03-29 07:44:28] -rw------- 1 boinc boinc       357 Mar 29 07:44 output.list
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc       620 Mar 29 07:44 runtime_log
[2026-03-29 07:44:28] -rw------- 1 boinc boinc    778240 Mar 29 07:44 result.tar.gz
[2026-03-29 07:44:28] -rw------- 1 boinc boinc       656 Mar 29 07:44 Xa0KDmg8rQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmiULKDmLx8n7m.diag
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc      8968 Mar 29 07:44 runtime_log.err
[2026-03-29 07:44:28] -rw-r--r-- 1 boinc boinc     21461 Mar 29 07:44 stderr.txt
[2026-03-29 07:44:28] HITS file was successfully produced:
[2026-03-29 07:44:28] -rw------- 1 boinc boinc 209570175 Mar 29 07:43 shared/HITS.pool.root.1
[2026-03-29 07:44:28]  *** Contents of shared directory: ***
[2026-03-29 07:44:28] total 419668
[2026-03-29 07:44:28] -rw-r--r-- 2 boinc boinc 218764317 Mar 29 06:51 ATLAS.root_0
[2026-03-29 07:44:28] -rw-r--r-- 2 boinc boinc     15845 Mar 29 06:51 start_atlas.sh
[2026-03-29 07:44:28] -rw-r--r-- 2 boinc boinc    597544 Mar 29 06:51 input.tar.gz
[2026-03-29 07:44:28] -rw------- 1 boinc boinc 209570175 Mar 29 07:43 HITS.pool.root.1
[2026-03-29 07:44:28] -rw------- 1 boinc boinc    778240 Mar 29 07:44 result.tar.gz
07:44:30 (57796): run_atlas exited; CPU time 23360.534908
07:44:30 (57796): called boinc_finish(0)

</stderr_txt>
]]>

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