Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-04 09:01:59 (1698176): vboxwrapper version 26210
2026-04-04 09:01:59 (1698176): BOINC client version: 7.14.2
2026-04-04 09:01:59 (1698176): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2026-04-04 09:02:00 (1698176): Successfully copied 'init_data.xml' to the shared directory.
2026-04-04 09:02:00 (1698176): Create VM. (boinc_c1ef4056ed467c72, slot#1)
2026-04-04 09:02:00 (1698176): Setting Memory Size for VM. (4200MB)
2026-04-04 09:02:01 (1698176): Setting CPU Count for VM. (2)
2026-04-04 09:02:01 (1698176): Setting Chipset Options for VM.
2026-04-04 09:02:01 (1698176): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-04 09:02:01 (1698176): Setting Boot Options for VM.
2026-04-04 09:02:02 (1698176): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-04 09:02:02 (1698176): Enabling VM Network Access.
2026-04-04 09:02:02 (1698176): Disabling USB Support for VM.
2026-04-04 09:02:03 (1698176): Disabling COM Port Support for VM.
2026-04-04 09:02:03 (1698176): Disabling LPT Port Support for VM.
2026-04-04 09:02:03 (1698176): Disabling Audio Support for VM.
2026-04-04 09:02:03 (1698176): Disabling Clipboard Support for VM.
2026-04-04 09:02:04 (1698176): Disabling Drag and Drop Support for VM.
2026-04-04 09:02:04 (1698176): Adding storage controller(s) to VM.
2026-04-04 09:02:04 (1698176): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-04 09:02:05 (1698176): Adding VirtualBox Guest Additions to VM.
2026-04-04 09:02:05 (1698176): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-04 09:02:05 (1698176): forwarding host port 64686 to guest port 80
2026-04-04 09:02:05 (1698176): Enabling remote desktop for VM.
2026-04-04 09:02:06 (1698176): Enabling shared directory for VM.
2026-04-04 09:02:07 (1698176): Starting VM using VBoxManage interface. (boinc_c1ef4056ed467c72, slot#1)
2026-04-04 09:02:13 (1698176): Successfully started VM. (PID = '1706816')
2026-04-04 09:02:13 (1698176): Reporting VM Process ID to BOINC.
2026-04-04 09:02:13 (1698176): Guest Log: BIOS: VirtualBox 6.1.40
2026-04-04 09:02:13 (1698176): Guest Log: CPUID EDX: 0x178bfbff
2026-04-04 09:02:13 (1698176): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-04 09:02:13 (1698176): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-04 09:02:13 (1698176): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-04 09:02:13 (1698176): Detected: Web Application Enabled (http://localhost:64686)
2026-04-04 09:02:13 (1698176): Detected: Remote Desktop Enabled (localhost:64687)
2026-04-04 09:02:13 (1698176): Preference change detected
2026-04-04 09:02:13 (1698176): Setting CPU throttle for VM. (100%)
2026-04-04 09:02:14 (1698176): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-04 09:02:15 (1698176): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-04 09:02:15 (1698176): Guest Log: BIOS: Booting from Hard Disk...
2026-04-04 09:02:18 (1698176): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-04 09:02:18 (1698176): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-04 09:02:18 (1698176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-04 09:02:24 (1698176): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-04 09:02:24 (1698176): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-04-04 09:02:31 (1698176): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-04 09:02:31 (1698176): Guest Log: 00:00:00.000191 main     Log opened 2026-04-04T09:02:29.450420000Z
2026-04-04 09:02:31 (1698176): Guest Log: 00:00:00.000306 main     OS Product: Linux
2026-04-04 09:02:31 (1698176): Guest Log: 00:00:00.000340 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-04 09:02:31 (1698176): Guest Log: 00:00:00.000371 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-04 09:02:31 (1698176): Guest Log: 00:00:00.000401 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-04 09:02:31 (1698176): Guest Log: 00:00:00.000402 main     Process ID: 1265
2026-04-04 09:02:31 (1698176): Guest Log: 00:00:00.000403 main     Package type: LINUX_64BITS_GENERIC
2026-04-04 09:02:31 (1698176): Guest Log: 00:00:00.002901 main     5.2.32 r132073 started. Verbose level = 0
2026-04-04 09:02:31 (1698176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-04 09:02:31 (1698176): Guest Log: [INFO] Mounting shared directory
2026-04-04 09:02:31 (1698176): Guest Log: [INFO] Checking for init_data.xml
2026-04-04 09:02:35 (1698176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-04 09:02:35 (1698176): Guest Log: [INFO] Detected branch: prod
2026-04-04 09:02:35 (1698176): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-04 09:02:35 (1698176): Guest Log: Copying input files
2026-04-04 09:02:37 (1698176): Guest Log: Copied input files into RunAtlas.
2026-04-04 09:02:37 (1698176): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-04 09:02:37 (1698176): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-04 09:02:37 (1698176): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-04 09:02:37 (1698176): Guest Log: Further information can be found at the LHC@home message board.
2026-04-04 09:02:41 (1698176): Guest Log: 00:00:10.063256 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 950 666 000ns (GuestNow=1 775 307 761 411 052 000 ns GuestLast=1 775 293 349 460 386 000 ns fSetTimeLastLoop=true )
2026-04-04 09:02:49 (1698176): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-04 09:02:49 (1698176): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-04 09:02:49 (1698176): Guest Log: 2.6.3.0 1543 0 32100 158077 3 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-04 09:02:50 (1698176): Guest Log: copied the webapp to /var/www
2026-04-04 09:02:50 (1698176): Guest Log: ATHENA_PROC_NUMBER=2
2026-04-04 09:02:50 (1698176): Guest Log: ATHENA_CORE_NUMBER=2
2026-04-04 09:02:50 (1698176): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-04 09:02:50 (1698176): Guest Log:  *** Starting ATLAS job. (PandaID=7072071382 taskID=48967085) ***
2026-04-04 10:42:46 (1698176): Status Report: Elapsed Time: '6000.177031'
2026-04-04 10:42:46 (1698176): Status Report: CPU Time: '11345.250000'
2026-04-04 12:23:26 (1698176): Status Report: Elapsed Time: '12000.177031'
2026-04-04 12:23:26 (1698176): Status Report: CPU Time: '23331.843750'
2026-04-04 14:03:53 (1698176): Status Report: Elapsed Time: '18000.308203'
2026-04-04 14:03:53 (1698176): Status Report: CPU Time: '35297.046875'
2026-04-04 15:49:57 (1698176): Status Report: Elapsed Time: '24000.778175'
2026-04-04 15:49:57 (1698176): Status Report: CPU Time: '47824.515625'
2026-04-04 17:30:46 (1698176): Status Report: Elapsed Time: '30001.051844'
2026-04-04 17:30:46 (1698176): Status Report: CPU Time: '59826.921875'
2026-04-04 17:53:05 (1698176): Guest Log:  *** Job finished ***
2026-04-04 17:53:05 (1698176): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:52:58,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:52:58,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:52:58,578 | INFO     | [monitor] cgroup control has ended
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:52:59,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655329265472)>', '<ExcThread(monitor, started 139654200284928)>']
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:00,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:00,036 | INFO     | [monitor] control thread has ended
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,387 | INFO     | all workflow threads have been joined
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,387 | INFO     | end of generic workflow (traces error code: 0)
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,387 | INFO     | traces error code: 0
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,486 [wrapper] ==== pilot stdout END ====
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,491 [wrapper] ==== wrapper stdout RESUME ====
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,495 [wrapper] pilotpid: 5925
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,499 [wrapper] Pilot exit status: 0
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,545 [wrapper] pandaids: 7072071382
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,574 [wrapper] cleanup supervisor_pilot  1110 5926
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,583 [wrapper] Test setup, not cleaning
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,589 [wrapper] apfmon messages muted
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,593 [wrapper] ==== wrapper stdout END ====
2026-04-04 17:53:05 (1698176): Guest Log: 2026-04-04 21:53:04,598 [wrapper] ==== wrapper stderr END ====
2026-04-04 17:53:05 (1698176): Guest Log:  *** Error codes and diagnostics ***
2026-04-04 17:53:05 (1698176): Guest Log:     "exeErrorCode": 0,
2026-04-04 17:53:05 (1698176): Guest Log:     "exeErrorDiag": "",
2026-04-04 17:53:05 (1698176): Guest Log:     "pilotErrorCode": 0,
2026-04-04 17:53:05 (1698176): Guest Log:     "pilotErrorDiag": "",
2026-04-04 17:53:05 (1698176): Guest Log:  *** Listing of results directory ***
2026-04-04 17:53:05 (1698176): Guest Log: total 206404
2026-04-04 17:53:05 (1698176): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 29 04:04 pilot3.tar.gz
2026-04-04 17:53:05 (1698176): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 29 04:08 runpilot2-wrapper.sh
2026-04-04 17:53:05 (1698176): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Mar 29 04:11 queuedata.json
2026-04-04 17:53:05 (1698176): Guest Log: -rwxr-xr-x. 1 atlas atlas      9015 Apr  4 13:02 init_data.xml
2026-04-04 17:53:05 (1698176): Guest Log: -rwxr-xr-x. 1 atlas atlas    597531 Apr  4 13:02 input.tar.gz
2026-04-04 17:53:05 (1698176): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Apr  4 13:02 start_atlas.sh
2026-04-04 17:53:05 (1698176): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  4 13:02 EVNT.48967083._001049.pool.root.1 -> /data/./ATLAS.root_0
2026-04-04 17:53:05 (1698176): Guest Log: -rw-r--r--. 1 atlas atlas      2566 Apr  4 13:02 pandaJob.out
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas   1005123 Apr  4 13:03 agis_schedconf.cvmfs.json
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas       428 Apr  4 13:03 workernode_map.json
2026-04-04 17:53:05 (1698176): Guest Log: drwx------. 5 atlas atlas      4096 Apr  4 13:03 pilot3
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas 197400517 Apr  4 21:51 HITS.48967085._030283.pool.root.1
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas        95 Apr  4 21:52 pilot_heartbeat.json
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas      1024 Apr  4 21:52 memory_monitor_summary.json
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr  4 21:52 agis_ddmendpoints.agis.ALL.json
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas    622992 Apr  4 21:52 log.48967085._030283.job.log.tgz.1
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas      6369 Apr  4 21:52 heartbeat.json
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas      4801 Apr  4 21:53 pilotlog.txt
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas   4423048 Apr  4 21:53 log.48967085._030283.job.log.1
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas       357 Apr  4 21:53 output.list
2026-04-04 17:53:05 (1698176): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  4 21:53 runtime_log
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas   5058560 Apr  4 21:53 result.tar.gz
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas       651 Apr  4 21:53 UWILDmKdwQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmCZJKDmmVZoon.diag
2026-04-04 17:53:05 (1698176): Guest Log: -rw-r--r--. 1 atlas atlas      8731 Apr  4 21:53 runtime_log.err
2026-04-04 17:53:05 (1698176): Guest Log: Looking for outputfile HITS.48967085._030283.pool.root.1
2026-04-04 17:53:05 (1698176): Guest Log: HITS file was successfully produced
2026-04-04 17:53:05 (1698176): Guest Log: -rw-------. 1 atlas atlas 197400517 Apr  4 21:51 /home/atlas/RunAtlas/HITS.48967085._030283.pool.root.1
2026-04-04 17:53:05 (1698176): Guest Log: Successfully finished the ATLAS job!
2026-04-04 17:53:05 (1698176): Guest Log: Copying the results back to the shared directory!
2026-04-04 17:53:06 (1698176): Guest Log:  *** Contents of shared directory: ***
2026-04-04 17:53:06 (1698176): Guest Log: total 404016
2026-04-04 17:53:06 (1698176): Guest Log: -rwxrwxrwx. 1 root root 210622009 Apr  4 13:01 ATLAS.root_0
2026-04-04 17:53:06 (1698176): Guest Log: -rwxrwxrwx. 1 root root 197400517 Apr  4 21:53 HITS.pool.root.1
2026-04-04 17:53:06 (1698176): Guest Log: -rwxrwxrwx. 1 root root      9015 Apr  4 13:01 init_data.xml
2026-04-04 17:53:06 (1698176): Guest Log: -rwxrwxrwx. 1 root root    597531 Mar 29 07:29 input.tar.gz
2026-04-04 17:53:06 (1698176): Guest Log: -rwxrwxrwx. 1 root root   5058560 Apr  4 21:53 result.tar.gz
2026-04-04 17:53:06 (1698176): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 29 07:29 start_atlas.sh
2026-04-04 17:53:06 (1698176): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-04 17:53:06 (1698176): VM Completion File Detected.
2026-04-04 17:53:06 (1698176): Powering off VM.
2026-04-04 17:53:07 (1698176): Successfully stopped VM.
2026-04-04 17:53:07 (1698176): Deregistering VM. (boinc_c1ef4056ed467c72, slot#1)
2026-04-04 17:53:07 (1698176): Removing network bandwidth throttle group from VM.
2026-04-04 17:53:08 (1698176): Removing VM from VirtualBox.
2026-04-04 17:53:13 (1698176): called boinc_finish(0)

</stderr_txt>
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