Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:24:31 (1178989): wrapper (7.7.26015): starting
23:24:31 (1178989): wrapper: running run_atlas (--nthreads 12)
[2026-04-04 23:24:31] Arguments: --nthreads 12
[2026-04-04 23:24:31] Threads: 12
[2026-04-04 23:24:31] Checking for CVMFS
[2026-04-04 23:24:31] No cvmfs_config command found, will try listing directly
[2026-04-04 23:24:31] CVMFS is ok
[2026-04-04 23:24:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-04 23:24:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-04 23:24:31] Further information can be found at the LHC@home message board.
[2026-04-04 23:24:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 23:24:31] Checking for apptainer binary...
[2026-04-04 23:24:31] which: no apptainer in ((null))
[2026-04-04 23:24:31] apptainer is not installed, using version from CVMFS
[2026-04-04 23:24:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 23:24:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-04-04 23:24:31] apptainer works
[2026-04-04 23:24:31] Set ATHENA_PROC_NUMBER=12
[2026-04-04 23:24:31] Set ATHENA_CORE_NUMBER=12
[2026-04-04 23:24:31] Starting ATLAS job with PandaID=7072071357
[2026-04-04 23:24:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 23:48:46]  *** The last 200 lines of the pilot log: ***
[2026-04-04 23:48:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-04 23:48:46]  is_altstaged=None
[2026-04-04 23:48:46]  is_tar=False
[2026-04-04 23:48:46]  lfn=log.48967085._030258.job.log.tgz.1
[2026-04-04 23:48:46]  mtime=0
[2026-04-04 23:48:46]  protocol_id=None
[2026-04-04 23:48:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-04 23:48:46]  replicas=None
[2026-04-04 23:48:46]  scope=mc23_13p6TeV
[2026-04-04 23:48:46]  status=None
[2026-04-04 23:48:46]  status_code=0
[2026-04-04 23:48:46]  storage_token=
[2026-04-04 23:48:46]  surl=/var/lib/boinc/var/slot48/slots/9/PanDA_Pilot-7072071357/log.48967085._030258.job.log.tgz.1
[2026-04-04 23:48:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/23/log.48967085._030258.job.log.tgz.1
[2026-04-04 23:48:46]  workdir=None
[2026-04-04 23:48:46] ]
[2026-04-04 23:48:46] 2026-04-04 21:47:39,728 | INFO     | transferring file log.48967085._030258.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/9/PanDA_Pilot-7072071357/log.48967085._030258.job.log.tgz.1 to /var/lib/b
[2026-04-04 23:48:46] 2026-04-04 21:47:39,728 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/9/PanDA_Pilot-7072071357/log.48967085._030258.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/9/lo
[2026-04-04 23:48:46] 2026-04-04 21:47:39,740 | INFO     | adding to output.list: log.48967085._030258.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/23/log.48967085._030258.job.log.tg
[2026-04-04 23:48:46] 2026-04-04 21:47:39,740 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-04 23:48:46] 2026-04-04 21:47:39,740 | INFO     | summary of transferred files:
[2026-04-04 23:48:46] 2026-04-04 21:47:39,740 | INFO     |  -- lfn=log.48967085._030258.job.log.tgz.1, status_code=0, status=transferred
[2026-04-04 23:48:46] 2026-04-04 21:47:39,740 | INFO     | stage-out finished correctly
[2026-04-04 23:48:46] 2026-04-04 21:47:40,271 | INFO     | time since job start (1382s) is within the limit (345600.0s)
[2026-04-04 23:48:46] 2026-04-04 21:47:42,277 | INFO     | time since job start (1384s) is within the limit (345600.0s)
[2026-04-04 23:48:46] 2026-04-04 21:47:43,026 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-04 23:48:46] 2026-04-04 21:47:43,051 | INFO     | job 7072071357 has state=finished
[2026-04-04 23:48:46] 2026-04-04 21:47:43,052 | INFO     | preparing for final server update for job 7072071357 in state='finished'
[2026-04-04 23:48:46] 2026-04-04 21:47:43,052 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/9/PanDA_Pilot-7072071357/jobReport.json
[2026-04-04 23:48:46] 2026-04-04 21:47:43,053 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/9/workernode_map.json
[2026-04-04 23:48:46] 2026-04-04 21:47:43,053 | INFO     | this job has now completed (state=finished)
[2026-04-04 23:48:46] 2026-04-04 21:47:43,053 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-04 23:48:46] 2026-04-04 21:47:43,053 | INFO     | log transfer has been attempted: DONE
[2026-04-04 23:48:46] 2026-04-04 21:47:43,054 | INFO     | job 7072071357 has finished - writing final server update
[2026-04-04 23:48:46] 2026-04-04 21:47:43,054 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1110131/.job.ad'
[2026-04-04 23:48:46] 2026-04-04 21:47:43,054 | INFO     | total number of processed events: 400 (read)
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | using path: /var/lib/boinc/var/slot48/slots/9/PanDA_Pilot-7072071357/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | extracted standard info from prmon json
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | fitting pss+swap vs Time
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | sum of square deviations: 1265140.0
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | sum of deviations: 40102742.0
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | mean x: 1775338658.5
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | mean y: 3149362.125
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | intersect: -56272004521.59665
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | chi2: 4.415790690710651e-05
[2026-04-04 23:48:46] 2026-04-04 21:47:43,063 | INFO     | current memory leak: 31.70 B/s (using 16 data points, chi2=0.00)
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | could have reported an average CPU frequency of 3761 MHz (4 samples)
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | ..............................
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | . Timing measurements:
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | . get job = 0 s
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | . initial setup = 3 s
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | . payload setup = 3 s
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | . stage-in = 0 s
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | . payload execution = 1362 s
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | . stage-out = 0 s
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | . log creation = 0 s
[2026-04-04 23:48:46] 2026-04-04 21:47:43,064 | INFO     | ..............................
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | 
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | job summary report
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | --------------------------------------------------
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | PanDA job id: 7072071357
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | task id: 48967085
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | errors: (none)
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | pilot state: finished 
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | transexitcode: 0
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | exeerrorcode: 0
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | exeerrordiag: 
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | exitcode: 0
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | exitmsg: OK
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | cpuconsumptiontime: 14910 s
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | nevents: 400
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | neventsw: 0
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | pid: 1190239
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | pgrp: 1190239
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | corecount: 12
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | event service: False
[2026-04-04 23:48:46] 2026-04-04 21:47:43,085 | INFO     | sizes: {0: 2279945, 1: 2280207, 11: 2280235, 1370: 2314008, 1374: 2314202}
[2026-04-04 23:48:46] 2026-04-04 21:47:43,086 | INFO     | --------------------------------------------------
[2026-04-04 23:48:46] 2026-04-04 21:47:43,086 | INFO     | 
[2026-04-04 23:48:46] 2026-04-04 21:47:43,086 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/9
[2026-04-04 23:48:46] 2026-04-04 21:47:43,098 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,098 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,098 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,098 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | job 7072071357 has completed (purged errors)
[2026-04-04 23:48:46] 2026-04-04 21:47:43,099 | INFO     | overall cleanup function is called
[2026-04-04 23:48:46] 2026-04-04 21:47:44,106 | INFO     | --- collectZombieJob: --- 10, [1190239]
[2026-04-04 23:48:46] 2026-04-04 21:47:44,106 | INFO     | zombie collector waiting for pid 1190239
[2026-04-04 23:48:46] 2026-04-04 21:47:44,106 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 23:48:46] 2026-04-04 21:47:44,106 | INFO     | collected zombie processes
[2026-04-04 23:48:46] 2026-04-04 21:47:44,106 | INFO     | will attempt to kill all subprocesses of pid=1190239
[2026-04-04 23:48:46] 2026-04-04 21:47:44,263 | INFO     | process IDs to be killed: [1190239] (in reverse order)
[2026-04-04 23:48:46] 2026-04-04 21:47:44,338 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 23:48:46] 2026-04-04 21:47:44,338 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 23:48:46] 2026-04-04 21:47:44,352 | INFO     | did not find any defunct processes belonging to 1190239
[2026-04-04 23:48:46] 2026-04-04 21:47:44,358 | INFO     | did not find any defunct processes belonging to 1190239
[2026-04-04 23:48:46] 2026-04-04 21:47:44,358 | INFO     | ready for new job
[2026-04-04 23:48:46] 2026-04-04 21:47:44,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 23:48:46] 2026-04-04 21:47:44,359 | INFO     | **************************************
[2026-04-04 23:48:46] 2026-04-04 21:47:44,359 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 23:48:46] 2026-04-04 21:47:44,359 | INFO     | **************************************
[2026-04-04 23:48:46] 2026-04-04 21:47:44,359 | INFO     | 
[2026-04-04 23:48:46] 2026-04-04 21:47:44,362 | INFO     | architecture information:
[2026-04-04 23:48:46] 2026-04-04 21:47:44,362 | INFO     | executing command: cat /etc/os-release
[2026-04-04 23:48:46] 2026-04-04 21:47:44,373 | INFO     | cat /etc/os-release:
[2026-04-04 23:48:46] NAME="CentOS Linux"
[2026-04-04 23:48:46] VERSION="7 (Core)"
[2026-04-04 23:48:46] ID="centos"
[2026-04-04 23:48:46] ID_LIKE="rhel fedora"
[2026-04-04 23:48:46] VERSION_ID="7"
[2026-04-04 23:48:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 23:48:46] ANSI_COLOR="0;31"
[2026-04-04 23:48:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 23:48:46] HOME_URL="https://www.centos.org/"
[2026-04-04 23:48:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 23:48:46] 
[2026-04-04 23:48:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 23:48:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 23:48:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 23:48:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 23:48:46] 
[2026-04-04 23:48:46] 2026-04-04 21:47:44,373 | INFO     | **************************************
[2026-04-04 23:48:46] 2026-04-04 21:47:44,876 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/9
[2026-04-04 23:48:46] 2026-04-04 21:47:44,887 | INFO     | sufficient remaining disk space (326464700416 B)
[2026-04-04 23:48:46] 2026-04-04 21:47:44,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 23:48:46] 2026-04-04 21:47:44,887 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 23:48:46] 2026-04-04 21:47:44,888 | INFO     | update_server=False
[2026-04-04 23:48:46] 2026-04-04 21:47:44,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 23:48:46] 2026-04-04 21:47:44,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 23:48:46] 2026-04-04 21:47:44,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 23:48:46] 2026-04-04 21:47:44,972 | INFO     | all payload control threads have been joined
[2026-04-04 23:48:46] 2026-04-04 21:47:45,270 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 23:48:46] 2026-04-04 21:47:45,320 | INFO     | all data control threads have been joined
[2026-04-04 23:48:46] 2026-04-04 21:47:45,552 | WARNING  | process 1190239 can no longer be monitored (due to stat problems) - aborting
[2026-04-04 23:48:46] 2026-04-04 21:47:45,681 | INFO     | using path: /var/lib/boinc/var/slot48/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 23:48:46] 2026-04-04 21:47:45,836 | INFO     | number of running child processes to parent process 1190239: 1
[2026-04-04 23:48:46] 2026-04-04 21:47:45,837 | INFO     | maximum number of monitored processes: 6
[2026-04-04 23:48:46] 2026-04-04 21:47:45,837 | INFO     | aborting job monitoring since job object (job id=7072071357) has expired
[2026-04-04 23:48:46] 2026-04-04 21:47:45,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 23:48:46] 2026-04-04 21:47:45,837 | INFO     | will abort loop
[2026-04-04 23:48:46] 2026-04-04 21:47:45,859 | INFO     | all job control threads have been joined
[2026-04-04 23:48:46] 2026-04-04 21:47:45,893 | INFO     | [job] retrieve thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:45,894 | INFO     | [job] queue monitor thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:45,978 | INFO     | [payload] control thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:46,325 | INFO     | [data] control thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:46,434 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:46,593 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:46,593 | INFO     | [job] validate thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:46,706 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:46,706 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:46,814 | INFO     | [data] copytool_in thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:46,842 | INFO     | [job] job monitor thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:46,856 | INFO     | [payload] validate_post thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:46,864 | INFO     | [job] control thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:47,275 | INFO     | [data] copytool_out thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:47,412 | INFO     | [payload] failed_post thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:47:48,895 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 23:48:46] 2026-04-04 21:48:15,563 | INFO     | PID=1183935 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-04 23:48:46] 2026-04-04 21:48:15,564 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 23:48:46] 2026-04-04 21:48:15,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 23:48:46] 2026-04-04 21:48:15,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 23:48:46] 2026-04-04 21:48:39,893 | INFO     | [monitor] cgroup control has ended
[2026-04-04 23:48:46] 2026-04-04 21:48:40,899 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22843485767488)>', '<ExcThread(monitor, started 22843179910912)>']
[2026-04-04 23:48:46] 2026-04-04 21:48:41,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 23:48:46] 2026-04-04 21:48:41,687 | INFO     | [monitor] control thread has ended
[2026-04-04 23:48:46] 2026-04-04 21:48:45,922 | INFO     | all workflow threads have been joined
[2026-04-04 23:48:46] 2026-04-04 21:48:45,922 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 23:48:46] 2026-04-04 21:48:45,922 | INFO     | traces error code: 0
[2026-04-04 23:48:46] 2026-04-04 21:48:45,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 23:48:46] 2026-04-04 21:48:46,000 [wrapper] ==== pilot stdout END ====
[2026-04-04 23:48:46] 2026-04-04 21:48:46,001 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 23:48:46] 2026-04-04 21:48:46,003 [wrapper] pilotpid: 1183935
[2026-04-04 23:48:46] 2026-04-04 21:48:46,004 [wrapper] Pilot exit status: 0
[2026-04-04 23:48:46] 2026-04-04 21:48:46,010 [wrapper] pandaids: 7072071357
[2026-04-04 23:48:46] 2026-04-04 21:48:46,067 [wrapper] cleanup supervisor_pilot 1210368 1183936
[2026-04-04 23:48:46] 2026-04-04 21:48:46,069 [wrapper] Test setup, not cleaning
[2026-04-04 23:48:46] 2026-04-04 21:48:46,071 [wrapper] apfmon messages muted
[2026-04-04 23:48:46] 2026-04-04 21:48:46,073 [wrapper] ==== wrapper stdout END ====
[2026-04-04 23:48:46] 2026-04-04 21:48:46,074 [wrapper] ==== wrapper stderr END ====
[2026-04-04 23:48:46]  *** Error codes and diagnostics ***
[2026-04-04 23:48:46]     "exeErrorCode": 0,
[2026-04-04 23:48:46]     "exeErrorDiag": "",
[2026-04-04 23:48:46]     "pilotErrorCode": 0,
[2026-04-04 23:48:46]     "pilotErrorDiag": "",
[2026-04-04 23:48:46]  *** Listing of results directory ***
[2026-04-04 23:48:46] total 407708
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc    585013 Mar 29 06:04 pilot3.tar.gz
[2026-04-04 23:48:46] -rwx------. 1 boinc boinc     36322 Mar 29 06:05 runpilot2-wrapper.sh
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc      5118 Mar 29 06:06 queuedata.json
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc       100 Apr  4 23:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 23:48:46] -rwxr-xr-x. 1 boinc boinc      7986 Apr  4 23:24 run_atlas
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc       105 Apr  4 23:24 job.xml
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc      6708 Apr  4 23:24 init_data.xml
[2026-04-04 23:48:46] -rw-r--r--. 2 boinc boinc 211044769 Apr  4 23:24 EVNT.48967083._001048.pool.root.1
[2026-04-04 23:48:46] -rw-r--r--. 2 boinc boinc     15845 Apr  4 23:24 start_atlas.sh
[2026-04-04 23:48:46] drwxrwx--x. 2 boinc boinc      4096 Apr  4 23:24 shared
[2026-04-04 23:48:46] -rw-r--r--. 2 boinc boinc    597536 Apr  4 23:24 input.tar.gz
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc         0 Apr  4 23:24 boinc_lockfile
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc      2566 Apr  4 23:24 pandaJob.out
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc   1005096 Apr  4 23:24 agis_schedconf.cvmfs.json
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc   1511579 Apr  4 23:24 agis_ddmendpoints.agis.ALL.json
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc       442 Apr  4 23:24 workernode_map.json
[2026-04-04 23:48:46] drwx------. 5 boinc boinc      4096 Apr  4 23:24 pilot3
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc 201333482 Apr  4 23:47 HITS.48967085._030258.pool.root.1
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc       529 Apr  4 23:47 boinc_task_state.xml
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc      1024 Apr  4 23:47 memory_monitor_summary.json
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc    347523 Apr  4 23:47 log.48967085._030258.job.log.tgz.1
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc      6351 Apr  4 23:47 heartbeat.json
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc        95 Apr  4 23:48 pilot_heartbeat.json
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc      8192 Apr  4 23:48 boinc_mmap_file
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc        27 Apr  4 23:48 wrapper_checkpoint.txt
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc      5286 Apr  4 23:48 pilotlog.txt
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc    242176 Apr  4 23:48 log.48967085._030258.job.log.1
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc       357 Apr  4 23:48 output.list
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc       620 Apr  4 23:48 runtime_log
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc    604160 Apr  4 23:48 result.tar.gz
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc      9206 Apr  4 23:48 runtime_log.err
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc       659 Apr  4 23:48 ioeLDmRawQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm7QJKDmmEHtjm.diag
[2026-04-04 23:48:46] -rw-r--r--. 1 boinc boinc     21333 Apr  4 23:48 stderr.txt
[2026-04-04 23:48:46] HITS file was successfully produced:
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc 201333482 Apr  4 23:47 shared/HITS.pool.root.1
[2026-04-04 23:48:46]  *** Contents of shared directory: ***
[2026-04-04 23:48:46] total 403916
[2026-04-04 23:48:46] -rw-r--r--. 2 boinc boinc 211044769 Apr  4 23:24 ATLAS.root_0
[2026-04-04 23:48:46] -rw-r--r--. 2 boinc boinc     15845 Apr  4 23:24 start_atlas.sh
[2026-04-04 23:48:46] -rw-r--r--. 2 boinc boinc    597536 Apr  4 23:24 input.tar.gz
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc 201333482 Apr  4 23:47 HITS.pool.root.1
[2026-04-04 23:48:46] -rw-------. 1 boinc boinc    604160 Apr  4 23:48 result.tar.gz
23:48:47 (1178989): run_atlas exited; CPU time 14921.686344
23:48:47 (1178989): called boinc_finish(0)

</stderr_txt>
]]>

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