Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:28:31 (1827718): wrapper (7.7.26015): starting
23:28:31 (1827718): wrapper: running run_atlas (--nthreads 12)
[2026-04-04 23:28:31] Arguments: --nthreads 12
[2026-04-04 23:28:31] Threads: 12
[2026-04-04 23:28:31] Checking for CVMFS
[2026-04-04 23:28:31] No cvmfs_config command found, will try listing directly
[2026-04-04 23:28:31] CVMFS is ok
[2026-04-04 23:28:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-04 23:28:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-04 23:28:31] Further information can be found at the LHC@home message board.
[2026-04-04 23:28:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 23:28:31] Checking for apptainer binary...
[2026-04-04 23:28:31] which: no apptainer in ((null))
[2026-04-04 23:28:31] apptainer is not installed, using version from CVMFS
[2026-04-04 23:28:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 23:28:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-04-04 23:28:31] apptainer works
[2026-04-04 23:28:31] Set ATHENA_PROC_NUMBER=12
[2026-04-04 23:28:31] Set ATHENA_CORE_NUMBER=12
[2026-04-04 23:28:31] Starting ATLAS job with PandaID=7072015967
[2026-04-04 23:28:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 23:53:46]  *** The last 200 lines of the pilot log: ***
[2026-04-04 23:53:46]  replicas=None
[2026-04-04 23:53:46]  scope=mc23_13p6TeV
[2026-04-04 23:53:46]  status=None
[2026-04-04 23:53:46]  status_code=0
[2026-04-04 23:53:46]  storage_token=
[2026-04-04 23:53:46]  surl=/var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015967/log.48967094._018996.job.log.tgz.1
[2026-04-04 23:53:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/39/log.48967094._018996.job.log.tgz.1
[2026-04-04 23:53:46]  workdir=None
[2026-04-04 23:53:46] ]
[2026-04-04 23:53:46] 2026-04-04 21:52:41,831 | INFO     | transferring file log.48967094._018996.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015967/log.48967094._018996.job.log.tgz.1 to /var/lib/b
[2026-04-04 23:53:46] 2026-04-04 21:52:41,831 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015967/log.48967094._018996.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/6/lo
[2026-04-04 23:53:46] 2026-04-04 21:52:41,845 | INFO     | adding to output.list: log.48967094._018996.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/39/log.48967094._018996.job.log.tg
[2026-04-04 23:53:46] 2026-04-04 21:52:41,845 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-04 23:53:46] 2026-04-04 21:52:41,845 | INFO     | summary of transferred files:
[2026-04-04 23:53:46] 2026-04-04 21:52:41,845 | INFO     |  -- lfn=log.48967094._018996.job.log.tgz.1, status_code=0, status=transferred
[2026-04-04 23:53:46] 2026-04-04 21:52:41,846 | INFO     | stage-out finished correctly
[2026-04-04 23:53:46] 2026-04-04 21:52:41,867 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-04 23:53:46] 2026-04-04 21:52:42,798 | INFO     | job 7072015967 has state=finished
[2026-04-04 23:53:46] 2026-04-04 21:52:42,798 | INFO     | preparing for final server update for job 7072015967 in state='finished'
[2026-04-04 23:53:46] 2026-04-04 21:52:42,799 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015967/jobReport.json
[2026-04-04 23:53:46] 2026-04-04 21:52:42,800 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/6/workernode_map.json
[2026-04-04 23:53:46] 2026-04-04 21:52:42,800 | INFO     | this job has now completed (state=finished)
[2026-04-04 23:53:46] 2026-04-04 21:52:42,800 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-04 23:53:46] 2026-04-04 21:52:42,800 | INFO     | log transfer has been attempted: DONE
[2026-04-04 23:53:46] 2026-04-04 21:52:42,800 | INFO     | job 7072015967 has finished - writing final server update
[2026-04-04 23:53:46] 2026-04-04 21:52:42,800 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1743328/.job.ad'
[2026-04-04 23:53:46] 2026-04-04 21:52:42,800 | INFO     | total number of processed events: 400 (read)
[2026-04-04 23:53:46] 2026-04-04 21:52:42,809 | INFO     | using path: /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015967/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 23:53:46] 2026-04-04 21:52:42,809 | INFO     | extracted standard info from prmon json
[2026-04-04 23:53:46] 2026-04-04 21:52:42,809 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 23:53:46] 2026-04-04 21:52:42,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-04 23:53:46] 2026-04-04 21:52:42,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 23:53:46] 2026-04-04 21:52:42,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | fitting pss+swap vs Time
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | sum of square deviations: 1518168.0
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | sum of deviations: 70444630.0
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | mean x: 1775338929.0
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | mean y: 3152904.0
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | intersect: -82374485129.47276
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | chi2: 5.262133218279459e-05
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | current memory leak: 46.40 B/s (using 17 data points, chi2=0.00)
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | could have reported an average CPU frequency of 3597 MHz (4 samples)
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | ..............................
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | . Timing measurements:
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | . get job = 0 s
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | . initial setup = 3 s
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | . payload setup = 4 s
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | . stage-in = 0 s
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | . payload execution = 1424 s
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | . stage-out = 0 s
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | . log creation = 0 s
[2026-04-04 23:53:46] 2026-04-04 21:52:42,810 | INFO     | ..............................
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | 
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | job summary report
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | --------------------------------------------------
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | PanDA job id: 7072015967
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | task id: 48967094
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | errors: (none)
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | pilot state: finished 
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | transexitcode: 0
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | exeerrorcode: 0
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | exeerrordiag: 
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | exitcode: 0
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | exitmsg: OK
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | cpuconsumptiontime: 15214 s
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | nevents: 400
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | neventsw: 0
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | pid: 1838294
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | pgrp: 1838294
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | corecount: 12
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | event service: False
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | sizes: {0: 2279979, 1: 2280269, 11: 2280269, 1432: 2305021, 1433: 2314097, 1434: 2314235}
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | --------------------------------------------------
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | 
[2026-04-04 23:53:46] 2026-04-04 21:52:42,834 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/6
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 23:53:46] 2026-04-04 21:52:42,846 | INFO     | job 7072015967 has completed (purged errors)
[2026-04-04 23:53:46] 2026-04-04 21:52:42,847 | INFO     | overall cleanup function is called
[2026-04-04 23:53:46] 2026-04-04 21:52:43,853 | INFO     | --- collectZombieJob: --- 10, [1838294]
[2026-04-04 23:53:46] 2026-04-04 21:52:43,854 | INFO     | zombie collector waiting for pid 1838294
[2026-04-04 23:53:46] 2026-04-04 21:52:43,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 23:53:46] 2026-04-04 21:52:43,855 | INFO     | collected zombie processes
[2026-04-04 23:53:46] 2026-04-04 21:52:43,855 | INFO     | will attempt to kill all subprocesses of pid=1838294
[2026-04-04 23:53:46] 2026-04-04 21:52:44,231 | WARNING  | process 1838294 can no longer be monitored (due to stat problems) - aborting
[2026-04-04 23:53:46] 2026-04-04 21:52:44,495 | INFO     | process IDs to be killed: [1838294] (in reverse order)
[2026-04-04 23:53:46] 2026-04-04 21:52:44,542 | INFO     | using path: /var/lib/boinc/var/slot48/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 23:53:46] 2026-04-04 21:52:44,542 | INFO     | using path: /var/lib/boinc/var/slot48/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 23:53:46] 2026-04-04 21:52:44,542 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-04 23:53:46] 2026-04-04 21:52:44,542 | WARNING  | maxPSS not found in memory monitor output
[2026-04-04 23:53:46] 2026-04-04 21:52:44,542 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015967/payload.stdout) since it has not been created yet
[2026-04-04 23:53:46] 2026-04-04 21:52:44,542 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/6
[2026-04-04 23:53:46] 2026-04-04 21:52:44,552 | INFO     | sufficient remaining disk space (325264080896 B)
[2026-04-04 23:53:46] 2026-04-04 21:52:44,552 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-04 23:53:46] 2026-04-04 21:52:44,552 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015967/HITS.48967094._018996.pool.root.1 since it does not exist
[2026-04-04 23:53:46] 2026-04-04 21:52:44,576 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 23:53:46] 2026-04-04 21:52:44,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 23:53:46] 2026-04-04 21:52:44,619 | INFO     | did not find any defunct processes belonging to 1838294
[2026-04-04 23:53:46] 2026-04-04 21:52:44,660 | INFO     | did not find any defunct processes belonging to 1838294
[2026-04-04 23:53:46] 2026-04-04 21:52:44,660 | INFO     | ready for new job
[2026-04-04 23:53:46] 2026-04-04 21:52:44,660 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 23:53:46] 2026-04-04 21:52:44,661 | INFO     | **************************************
[2026-04-04 23:53:46] 2026-04-04 21:52:44,661 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 23:53:46] 2026-04-04 21:52:44,661 | INFO     | **************************************
[2026-04-04 23:53:46] 2026-04-04 21:52:44,661 | INFO     | 
[2026-04-04 23:53:46] 2026-04-04 21:52:44,666 | INFO     | architecture information:
[2026-04-04 23:53:46] 2026-04-04 21:52:44,666 | INFO     | executing command: cat /etc/os-release
[2026-04-04 23:53:46] 2026-04-04 21:52:44,674 | INFO     | cat /etc/os-release:
[2026-04-04 23:53:46] NAME="CentOS Linux"
[2026-04-04 23:53:46] VERSION="7 (Core)"
[2026-04-04 23:53:46] ID="centos"
[2026-04-04 23:53:46] ID_LIKE="rhel fedora"
[2026-04-04 23:53:46] VERSION_ID="7"
[2026-04-04 23:53:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 23:53:46] ANSI_COLOR="0;31"
[2026-04-04 23:53:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 23:53:46] HOME_URL="https://www.centos.org/"
[2026-04-04 23:53:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 23:53:46] 
[2026-04-04 23:53:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 23:53:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 23:53:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 23:53:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 23:53:46] 
[2026-04-04 23:53:46] 2026-04-04 21:52:44,674 | INFO     | **************************************
[2026-04-04 23:53:46] 2026-04-04 21:52:44,781 | INFO     | number of running child processes to parent process 1838294: 1
[2026-04-04 23:53:46] 2026-04-04 21:52:44,782 | INFO     | maximum number of monitored processes: 6
[2026-04-04 23:53:46] 2026-04-04 21:52:44,782 | INFO     | aborting job monitoring since job object (job id=7072015967) has expired
[2026-04-04 23:53:46] 2026-04-04 21:52:45,177 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/6
[2026-04-04 23:53:46] 2026-04-04 21:52:45,187 | INFO     | sufficient remaining disk space (325264080896 B)
[2026-04-04 23:53:46] 2026-04-04 21:52:45,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 23:53:46] 2026-04-04 21:52:45,188 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 23:53:46] 2026-04-04 21:52:45,188 | INFO     | update_server=False
[2026-04-04 23:53:46] 2026-04-04 21:52:45,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 23:53:46] 2026-04-04 21:52:45,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 23:53:46] 2026-04-04 21:52:45,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 23:53:46] 2026-04-04 21:52:45,189 | INFO     | will abort loop
[2026-04-04 23:53:46] 2026-04-04 21:52:45,723 | INFO     | all job control threads have been joined
[2026-04-04 23:53:46] 2026-04-04 21:52:46,193 | INFO     | [job] retrieve thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:46,194 | INFO     | [job] job monitor thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:46,222 | INFO     | all data control threads have been joined
[2026-04-04 23:53:46] 2026-04-04 21:52:46,661 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:46,671 | INFO     | all payload control threads have been joined
[2026-04-04 23:53:46] 2026-04-04 21:52:46,729 | INFO     | [job] control thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:46,797 | INFO     | [payload] failed_post thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:46,809 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:46,810 | INFO     | [job] validate thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:46,891 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:46,968 | INFO     | [data] copytool_in thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:47,194 | INFO     | [data] copytool_out thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:47,227 | INFO     | [data] control thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:47,359 | INFO     | [payload] validate_post thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:47,676 | INFO     | [payload] control thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:47,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 23:53:46] 2026-04-04 21:52:47,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 23:53:46] 2026-04-04 21:52:48,850 | INFO     | [job] queue monitor thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:51,920 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:52:55,543 | INFO     | job.realtimelogging is not enabled
[2026-04-04 23:53:46] 2026-04-04 21:52:56,548 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 23:53:46] 2026-04-04 21:53:14,444 | INFO     | PID=1832576 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-04 23:53:46] 2026-04-04 21:53:14,445 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 23:53:46] 2026-04-04 21:53:14,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 23:53:46] 2026-04-04 21:53:14,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 23:53:46] 2026-04-04 21:53:40,199 | INFO     | [monitor] cgroup control has ended
[2026-04-04 23:53:46] 2026-04-04 21:53:41,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23203413083968)>', '<ExcThread(monitor, started 23203174168320)>']
[2026-04-04 23:53:46] 2026-04-04 21:53:41,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 23:53:46] 2026-04-04 21:53:41,581 | INFO     | [monitor] control thread has ended
[2026-04-04 23:53:46] 2026-04-04 21:53:46,202 | INFO     | all workflow threads have been joined
[2026-04-04 23:53:46] 2026-04-04 21:53:46,202 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 23:53:46] 2026-04-04 21:53:46,202 | INFO     | traces error code: 0
[2026-04-04 23:53:46] 2026-04-04 21:53:46,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 23:53:46] 2026-04-04 21:53:46,264 [wrapper] ==== pilot stdout END ====
[2026-04-04 23:53:46] 2026-04-04 21:53:46,266 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 23:53:46] 2026-04-04 21:53:46,268 [wrapper] pilotpid: 1832576
[2026-04-04 23:53:46] 2026-04-04 21:53:46,270 [wrapper] Pilot exit status: 0
[2026-04-04 23:53:46] 2026-04-04 21:53:46,277 [wrapper] pandaids: 7072015967
[2026-04-04 23:53:46] 2026-04-04 21:53:46,338 [wrapper] cleanup supervisor_pilot 1858997 1832577
[2026-04-04 23:53:46] 2026-04-04 21:53:46,339 [wrapper] Test setup, not cleaning
[2026-04-04 23:53:46] 2026-04-04 21:53:46,341 [wrapper] apfmon messages muted
[2026-04-04 23:53:46] 2026-04-04 21:53:46,343 [wrapper] ==== wrapper stdout END ====
[2026-04-04 23:53:46] 2026-04-04 21:53:46,344 [wrapper] ==== wrapper stderr END ====
[2026-04-04 23:53:46]  *** Error codes and diagnostics ***
[2026-04-04 23:53:46]     "exeErrorCode": 0,
[2026-04-04 23:53:46]     "exeErrorDiag": "",
[2026-04-04 23:53:46]     "pilotErrorCode": 0,
[2026-04-04 23:53:46]     "pilotErrorDiag": "",
[2026-04-04 23:53:46]  *** Listing of results directory ***
[2026-04-04 23:53:46] total 425892
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc    585013 Mar 29 03:13 pilot3.tar.gz
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc      5118 Mar 29 03:13 queuedata.json
[2026-04-04 23:53:46] -rwx------. 1 boinc boinc     36322 Mar 29 03:13 runpilot2-wrapper.sh
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc       100 Apr  4 23:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 23:53:46] -rwxr-xr-x. 1 boinc boinc      7986 Apr  4 23:28 run_atlas
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc       105 Apr  4 23:28 job.xml
[2026-04-04 23:53:46] -rw-r--r--. 2 boinc boinc 218836600 Apr  4 23:28 EVNT.48967092._000478.pool.root.1
[2026-04-04 23:53:46] -rw-r--r--. 2 boinc boinc     15845 Apr  4 23:28 start_atlas.sh
[2026-04-04 23:53:46] drwxrwx--x. 2 boinc boinc      4096 Apr  4 23:28 shared
[2026-04-04 23:53:46] -rw-r--r--. 2 boinc boinc    597547 Apr  4 23:28 input.tar.gz
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc      6708 Apr  4 23:28 init_data.xml
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc         0 Apr  4 23:28 boinc_lockfile
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc      2601 Apr  4 23:28 pandaJob.out
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc   1005096 Apr  4 23:28 agis_schedconf.cvmfs.json
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc   1511579 Apr  4 23:28 agis_ddmendpoints.agis.ALL.json
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc       444 Apr  4 23:28 workernode_map.json
[2026-04-04 23:53:46] drwx------. 5 boinc boinc      4096 Apr  4 23:28 pilot3
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc 212150990 Apr  4 23:52 HITS.48967094._018996.pool.root.1
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc       529 Apr  4 23:52 boinc_task_state.xml
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc      1023 Apr  4 23:52 memory_monitor_summary.json
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc    348837 Apr  4 23:52 log.48967094._018996.job.log.tgz.1
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc      6352 Apr  4 23:52 heartbeat.json
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc        95 Apr  4 23:53 pilot_heartbeat.json
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc      8192 Apr  4 23:53 boinc_mmap_file
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc        27 Apr  4 23:53 wrapper_checkpoint.txt
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc      5116 Apr  4 23:53 pilotlog.txt
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc    249451 Apr  4 23:53 log.48967094._018996.job.log.1
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc       357 Apr  4 23:53 output.list
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc       620 Apr  4 23:53 runtime_log
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc    614400 Apr  4 23:53 result.tar.gz
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc      9206 Apr  4 23:53 runtime_log.err
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc       659 Apr  4 23:53 VPVLDm4ttQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmFBJKDmEo705n.diag
[2026-04-04 23:53:46] -rw-r--r--. 1 boinc boinc     21948 Apr  4 23:53 stderr.txt
[2026-04-04 23:53:46] HITS file was successfully produced:
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc 212150990 Apr  4 23:52 shared/HITS.pool.root.1
[2026-04-04 23:53:46]  *** Contents of shared directory: ***
[2026-04-04 23:53:46] total 422092
[2026-04-04 23:53:46] -rw-r--r--. 2 boinc boinc 218836600 Apr  4 23:28 ATLAS.root_0
[2026-04-04 23:53:46] -rw-r--r--. 2 boinc boinc     15845 Apr  4 23:28 start_atlas.sh
[2026-04-04 23:53:46] -rw-r--r--. 2 boinc boinc    597547 Apr  4 23:28 input.tar.gz
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc 212150990 Apr  4 23:52 HITS.pool.root.1
[2026-04-04 23:53:46] -rw-------. 1 boinc boinc    614400 Apr  4 23:53 result.tar.gz
23:53:48 (1827718): run_atlas exited; CPU time 15228.342835
23:53:48 (1827718): called boinc_finish(0)

</stderr_txt>
]]>

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