Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:06:08 (1987774): wrapper (7.7.26015): starting
01:06:08 (1987774): wrapper: running run_atlas (--nthreads 12)
[2026-04-05 01:06:08] Arguments: --nthreads 12
[2026-04-05 01:06:08] Threads: 12
[2026-04-05 01:06:08] Checking for CVMFS
[2026-04-05 01:06:08] No cvmfs_config command found, will try listing directly
[2026-04-05 01:06:08] CVMFS is ok
[2026-04-05 01:06:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 01:06:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 01:06:08] Further information can be found at the LHC@home message board.
[2026-04-05 01:06:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 01:06:08] Checking for apptainer binary...
[2026-04-05 01:06:08] which: no apptainer in ((null))
[2026-04-05 01:06:08] apptainer is not installed, using version from CVMFS
[2026-04-05 01:06:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 01:06:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-04-05 01:06:08] apptainer works
[2026-04-05 01:06:08] Set ATHENA_PROC_NUMBER=12
[2026-04-05 01:06:08] Set ATHENA_CORE_NUMBER=12
[2026-04-05 01:06:08] Starting ATLAS job with PandaID=7072015801
[2026-04-05 01:06:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 01:31:23]  *** The last 200 lines of the pilot log: ***
[2026-04-05 01:31:23]  direct_access_lan=False
[2026-04-05 01:31:23]  direct_access_wan=False
[2026-04-05 01:31:23]  domain=
[2026-04-05 01:31:23]  filesize=338224
[2026-04-05 01:31:23]  filetype=log
[2026-04-05 01:31:23]  guid=89dc998d-f375-4834-b581-0ee6906c0e85
[2026-04-05 01:31:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-05 01:31:23]  is_altstaged=None
[2026-04-05 01:31:23]  is_tar=False
[2026-04-05 01:31:23]  lfn=log.48967094._018830.job.log.tgz.1
[2026-04-05 01:31:23]  mtime=0
[2026-04-05 01:31:23]  protocol_id=None
[2026-04-05 01:31:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-05 01:31:23]  replicas=None
[2026-04-05 01:31:23]  scope=mc23_13p6TeV
[2026-04-05 01:31:23]  status=None
[2026-04-05 01:31:23]  status_code=0
[2026-04-05 01:31:23]  storage_token=
[2026-04-05 01:31:23]  surl=/var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015801/log.48967094._018830.job.log.tgz.1
[2026-04-05 01:31:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/68/log.48967094._018830.job.log.tgz.1
[2026-04-05 01:31:23]  workdir=None
[2026-04-05 01:31:23] ]
[2026-04-05 01:31:23] 2026-04-04 23:30:36,548 | INFO     | transferring file log.48967094._018830.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015801/log.48967094._018830.job.log.tgz.1 to /var/lib/b
[2026-04-05 01:31:23] 2026-04-04 23:30:36,548 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015801/log.48967094._018830.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/6/lo
[2026-04-05 01:31:23] 2026-04-04 23:30:36,557 | INFO     | adding to output.list: log.48967094._018830.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/68/log.48967094._018830.job.log.tg
[2026-04-05 01:31:23] 2026-04-04 23:30:36,557 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-05 01:31:23] 2026-04-04 23:30:36,557 | INFO     | summary of transferred files:
[2026-04-05 01:31:23] 2026-04-04 23:30:36,557 | INFO     |  -- lfn=log.48967094._018830.job.log.tgz.1, status_code=0, status=transferred
[2026-04-05 01:31:23] 2026-04-04 23:30:36,557 | INFO     | stage-out finished correctly
[2026-04-05 01:31:23] 2026-04-04 23:30:37,110 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-05 01:31:23] 2026-04-04 23:30:37,134 | INFO     | job 7072015801 has state=finished
[2026-04-05 01:31:23] 2026-04-04 23:30:37,134 | INFO     | preparing for final server update for job 7072015801 in state='finished'
[2026-04-05 01:31:23] 2026-04-04 23:30:37,135 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015801/jobReport.json
[2026-04-05 01:31:23] 2026-04-04 23:30:37,136 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/6/workernode_map.json
[2026-04-05 01:31:23] 2026-04-04 23:30:37,136 | INFO     | this job has now completed (state=finished)
[2026-04-05 01:31:23] 2026-04-04 23:30:37,136 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 01:31:23] 2026-04-04 23:30:37,136 | INFO     | log transfer has been attempted: DONE
[2026-04-05 01:31:23] 2026-04-04 23:30:37,136 | INFO     | job 7072015801 has finished - writing final server update
[2026-04-05 01:31:23] 2026-04-04 23:30:37,136 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1743328/.job.ad'
[2026-04-05 01:31:23] 2026-04-04 23:30:37,137 | INFO     | total number of processed events: 400 (read)
[2026-04-05 01:31:23] 2026-04-04 23:30:37,145 | INFO     | using path: /var/lib/boinc/var/slot48/slots/6/PanDA_Pilot-7072015801/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 01:31:23] 2026-04-04 23:30:37,145 | INFO     | extracted standard info from prmon json
[2026-04-05 01:31:23] 2026-04-04 23:30:37,145 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 01:31:23] 2026-04-04 23:30:37,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | INFO     | fitting pss+swap vs Time
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | INFO     | sum of square deviations: 1518168.0
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | INFO     | sum of deviations: -704605509.9999999
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | INFO     | mean x: 1775344786.0
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | INFO     | mean y: 2862054.0588235296
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | INFO     | intersect: 823968140182.2834
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | INFO     | chi2: 0.02732248030065103
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | INFO     | current memory leak: -464.12 B/s (using 17 data points, chi2=0.03)
[2026-04-05 01:31:23] 2026-04-04 23:30:37,146 | INFO     | could have reported an average CPU frequency of 3551 MHz (4 samples)
[2026-04-05 01:31:23] 2026-04-04 23:30:37,147 | INFO     | ..............................
[2026-04-05 01:31:23] 2026-04-04 23:30:37,147 | INFO     | . Timing measurements:
[2026-04-05 01:31:23] 2026-04-04 23:30:37,147 | INFO     | . get job = 0 s
[2026-04-05 01:31:23] 2026-04-04 23:30:37,147 | INFO     | . initial setup = 2 s
[2026-04-05 01:31:23] 2026-04-04 23:30:37,147 | INFO     | . payload setup = 3 s
[2026-04-05 01:31:23] 2026-04-04 23:30:37,147 | INFO     | . stage-in = 0 s
[2026-04-05 01:31:23] 2026-04-04 23:30:37,147 | INFO     | . payload execution = 1441 s
[2026-04-05 01:31:23] 2026-04-04 23:30:37,147 | INFO     | . stage-out = 0 s
[2026-04-05 01:31:23] 2026-04-04 23:30:37,147 | INFO     | . log creation = 0 s
[2026-04-05 01:31:23] 2026-04-04 23:30:37,147 | INFO     | ..............................
[2026-04-05 01:31:23] 2026-04-04 23:30:37,168 | INFO     | 
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | job summary report
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | --------------------------------------------------
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | PanDA job id: 7072015801
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | task id: 48967094
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | errors: (none)
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | pilot state: finished 
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | transexitcode: 0
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | exeerrorcode: 0
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | exeerrordiag: 
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | exitcode: 0
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | exitmsg: OK
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | cpuconsumptiontime: 15038 s
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | nevents: 400
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | neventsw: 0
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | pid: 1998341
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | pgrp: 1998341
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | corecount: 12
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | event service: False
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | sizes: {0: 2280241, 11: 2280241, 1448: 2305021, 1449: 2314041, 1450: 2314291}
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | --------------------------------------------------
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | 
[2026-04-05 01:31:23] 2026-04-04 23:30:37,169 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/6
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,184 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,184 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 01:31:23] 2026-04-04 23:30:37,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,184 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 01:31:23] 2026-04-04 23:30:37,184 | INFO     | job 7072015801 has completed (purged errors)
[2026-04-05 01:31:23] 2026-04-04 23:30:37,184 | INFO     | overall cleanup function is called
[2026-04-05 01:31:23] 2026-04-04 23:30:38,190 | INFO     | --- collectZombieJob: --- 10, [1998341]
[2026-04-05 01:31:23] 2026-04-04 23:30:38,191 | INFO     | zombie collector waiting for pid 1998341
[2026-04-05 01:31:23] 2026-04-04 23:30:38,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 01:31:23] 2026-04-04 23:30:38,191 | INFO     | collected zombie processes
[2026-04-05 01:31:23] 2026-04-04 23:30:38,191 | INFO     | will attempt to kill all subprocesses of pid=1998341
[2026-04-05 01:31:23] 2026-04-04 23:30:38,358 | INFO     | process IDs to be killed: [1998341] (in reverse order)
[2026-04-05 01:31:23] 2026-04-04 23:30:38,436 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 01:31:23] 2026-04-04 23:30:38,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 01:31:23] 2026-04-04 23:30:38,451 | INFO     | did not find any defunct processes belonging to 1998341
[2026-04-05 01:31:23] 2026-04-04 23:30:38,458 | INFO     | did not find any defunct processes belonging to 1998341
[2026-04-05 01:31:23] 2026-04-04 23:30:38,458 | INFO     | ready for new job
[2026-04-05 01:31:23] 2026-04-04 23:30:38,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-05 01:31:23] 2026-04-04 23:30:38,459 | INFO     | **************************************
[2026-04-05 01:31:23] 2026-04-04 23:30:38,459 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-05 01:31:23] 2026-04-04 23:30:38,459 | INFO     | **************************************
[2026-04-05 01:31:23] 2026-04-04 23:30:38,459 | INFO     | 
[2026-04-05 01:31:23] 2026-04-04 23:30:38,462 | INFO     | architecture information:
[2026-04-05 01:31:23] 2026-04-04 23:30:38,462 | INFO     | executing command: cat /etc/os-release
[2026-04-05 01:31:23] 2026-04-04 23:30:38,474 | INFO     | cat /etc/os-release:
[2026-04-05 01:31:23] NAME="CentOS Linux"
[2026-04-05 01:31:23] VERSION="7 (Core)"
[2026-04-05 01:31:23] ID="centos"
[2026-04-05 01:31:23] ID_LIKE="rhel fedora"
[2026-04-05 01:31:23] VERSION_ID="7"
[2026-04-05 01:31:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 01:31:23] ANSI_COLOR="0;31"
[2026-04-05 01:31:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 01:31:23] HOME_URL="https://www.centos.org/"
[2026-04-05 01:31:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 01:31:23] 
[2026-04-05 01:31:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 01:31:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 01:31:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 01:31:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 01:31:23] 
[2026-04-05 01:31:23] 2026-04-04 23:30:38,474 | INFO     | **************************************
[2026-04-05 01:31:23] 2026-04-04 23:30:38,977 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/6
[2026-04-05 01:31:23] 2026-04-04 23:30:38,988 | INFO     | sufficient remaining disk space (326127058944 B)
[2026-04-05 01:31:23] 2026-04-04 23:30:38,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 01:31:23] 2026-04-04 23:30:38,988 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 01:31:23] 2026-04-04 23:30:38,988 | INFO     | update_server=False
[2026-04-05 01:31:23] 2026-04-04 23:30:38,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-05 01:31:23] 2026-04-04 23:30:38,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 01:31:23] 2026-04-04 23:30:38,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 01:31:23] 2026-04-04 23:30:39,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 01:31:23] 2026-04-04 23:30:39,039 | INFO     | aborting loop
[2026-04-05 01:31:23] 2026-04-04 23:30:39,084 | INFO     | all data control threads have been joined
[2026-04-05 01:31:23] 2026-04-04 23:30:39,386 | INFO     | all payload control threads have been joined
[2026-04-05 01:31:23] 2026-04-04 23:30:39,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 01:31:23] 2026-04-04 23:30:39,994 | INFO     | [job] retrieve thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:39,995 | INFO     | [job] queue monitor thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:40,044 | INFO     | [job] job monitor thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:40,090 | INFO     | [data] control thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:40,193 | INFO     | all job control threads have been joined
[2026-04-05 01:31:23] 2026-04-04 23:30:40,305 | INFO     | [payload] failed_post thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:40,392 | INFO     | [payload] control thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:40,797 | INFO     | [job] validate thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:40,797 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:40,855 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:41,003 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:41,029 | INFO     | [data] copytool_in thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:41,198 | INFO     | [job] control thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:41,333 | INFO     | [payload] validate_post thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:41,589 | INFO     | [data] copytool_out thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:42,995 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:30:49,875 | INFO     | job.realtimelogging is not enabled
[2026-04-05 01:31:23] 2026-04-04 23:30:50,881 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 01:31:23] 2026-04-04 23:31:08,937 | INFO     | PID=1992630 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 01:31:23] 2026-04-04 23:31:08,937 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 01:31:23] 2026-04-04 23:31:08,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 01:31:23] 2026-04-04 23:31:08,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 01:31:23] 2026-04-04 23:31:17,582 | INFO     | [monitor] cgroup control has ended
[2026-04-05 01:31:23] 2026-04-04 23:31:18,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22542094649152)>', '<ExcThread(monitor, started 22541839349504)>']
[2026-04-05 01:31:23] 2026-04-04 23:31:18,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 01:31:23] 2026-04-04 23:31:18,988 | INFO     | [monitor] control thread has ended
[2026-04-05 01:31:23] 2026-04-04 23:31:23,384 | INFO     | all workflow threads have been joined
[2026-04-05 01:31:23] 2026-04-04 23:31:23,385 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 01:31:23] 2026-04-04 23:31:23,385 | INFO     | traces error code: 0
[2026-04-05 01:31:23] 2026-04-04 23:31:23,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 01:31:23] 2026-04-04 23:31:23,456 [wrapper] ==== pilot stdout END ====
[2026-04-05 01:31:23] 2026-04-04 23:31:23,457 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 01:31:23] 2026-04-04 23:31:23,460 [wrapper] pilotpid: 1992630
[2026-04-05 01:31:23] 2026-04-04 23:31:23,461 [wrapper] Pilot exit status: 0
[2026-04-05 01:31:23] 2026-04-04 23:31:23,468 [wrapper] pandaids: 7072015801
[2026-04-05 01:31:23] 2026-04-04 23:31:23,529 [wrapper] cleanup supervisor_pilot 2016358 1992631
[2026-04-05 01:31:23] 2026-04-04 23:31:23,530 [wrapper] Test setup, not cleaning
[2026-04-05 01:31:23] 2026-04-04 23:31:23,532 [wrapper] apfmon messages muted
[2026-04-05 01:31:23] 2026-04-04 23:31:23,534 [wrapper] ==== wrapper stdout END ====
[2026-04-05 01:31:23] 2026-04-04 23:31:23,535 [wrapper] ==== wrapper stderr END ====
[2026-04-05 01:31:23]  *** Error codes and diagnostics ***
[2026-04-05 01:31:23]     "exeErrorCode": 0,
[2026-04-05 01:31:23]     "exeErrorDiag": "",
[2026-04-05 01:31:23]     "pilotErrorCode": 0,
[2026-04-05 01:31:23]     "pilotErrorDiag": "",
[2026-04-05 01:31:23]  *** Listing of results directory ***
[2026-04-05 01:31:23] total 422804
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc    585013 Mar 29 03:13 pilot3.tar.gz
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc      5118 Mar 29 03:13 queuedata.json
[2026-04-05 01:31:23] -rwx------. 1 boinc boinc     36322 Mar 29 03:13 runpilot2-wrapper.sh
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc       100 Apr  5 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 01:31:23] -rwxr-xr-x. 1 boinc boinc      7986 Apr  5 01:06 run_atlas
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc       105 Apr  5 01:06 job.xml
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc      6708 Apr  5 01:06 init_data.xml
[2026-04-05 01:31:23] -rw-r--r--. 2 boinc boinc 216488790 Apr  5 01:06 EVNT.48967092._000467.pool.root.1
[2026-04-05 01:31:23] -rw-r--r--. 2 boinc boinc     15845 Apr  5 01:06 start_atlas.sh
[2026-04-05 01:31:23] drwxrwx--x. 2 boinc boinc      4096 Apr  5 01:06 shared
[2026-04-05 01:31:23] -rw-r--r--. 2 boinc boinc    597548 Apr  5 01:06 input.tar.gz
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc         0 Apr  5 01:06 boinc_lockfile
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc      2601 Apr  5 01:06 pandaJob.out
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc   1005080 Apr  5 01:06 agis_schedconf.cvmfs.json
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc   1511579 Apr  5 01:06 agis_ddmendpoints.agis.ALL.json
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc       444 Apr  5 01:06 workernode_map.json
[2026-04-05 01:31:23] drwx------. 5 boinc boinc      4096 Apr  5 01:06 pilot3
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc 211347041 Apr  5 01:30 HITS.48967094._018830.pool.root.1
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc       529 Apr  5 01:30 boinc_task_state.xml
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc      1023 Apr  5 01:30 memory_monitor_summary.json
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc        95 Apr  5 01:30 pilot_heartbeat.json
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc    338224 Apr  5 01:30 log.48967094._018830.job.log.tgz.1
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc      6359 Apr  5 01:30 heartbeat.json
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc      8192 Apr  5 01:30 boinc_mmap_file
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc        27 Apr  5 01:30 wrapper_checkpoint.txt
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc      4826 Apr  5 01:31 pilotlog.txt
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc    252190 Apr  5 01:31 log.48967094._018830.job.log.1
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc       357 Apr  5 01:31 output.list
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc       620 Apr  5 01:31 runtime_log
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc    604160 Apr  5 01:31 result.tar.gz
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc      9206 Apr  5 01:31 runtime_log.err
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc       658 Apr  5 01:31 jCeNDm2ttQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm2AJKDmExGBGo.diag
[2026-04-05 01:31:23] -rw-r--r--. 1 boinc boinc     20827 Apr  5 01:31 stderr.txt
[2026-04-05 01:31:23] HITS file was successfully produced:
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc 211347041 Apr  5 01:30 shared/HITS.pool.root.1
[2026-04-05 01:31:23]  *** Contents of shared directory: ***
[2026-04-05 01:31:23] total 419012
[2026-04-05 01:31:23] -rw-r--r--. 2 boinc boinc 216488790 Apr  5 01:06 ATLAS.root_0
[2026-04-05 01:31:23] -rw-r--r--. 2 boinc boinc     15845 Apr  5 01:06 start_atlas.sh
[2026-04-05 01:31:23] -rw-r--r--. 2 boinc boinc    597548 Apr  5 01:06 input.tar.gz
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc 211347041 Apr  5 01:30 HITS.pool.root.1
[2026-04-05 01:31:23] -rw-------. 1 boinc boinc    604160 Apr  5 01:31 result.tar.gz
01:31:25 (1987774): run_atlas exited; CPU time 15053.303975
01:31:25 (1987774): called boinc_finish(0)

</stderr_txt>
]]>

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