Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:46 (2617842): wrapper (7.7.26015): starting
18:33:46 (2617842): wrapper: running run_atlas (--nthreads 12)
[2026-03-30 18:33:46] Arguments: --nthreads 12
[2026-03-30 18:33:46] Threads: 12
[2026-03-30 18:33:46] Checking for CVMFS
[2026-03-30 18:33:46] No cvmfs_config command found, will try listing directly
[2026-03-30 18:33:46] CVMFS is ok
[2026-03-30 18:33:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 18:33:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 18:33:46] Further information can be found at the LHC@home message board.
[2026-03-30 18:33:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 18:33:46] Checking for apptainer binary...
[2026-03-30 18:33:46] which: no apptainer in ((null))
[2026-03-30 18:33:46] apptainer is not installed, using version from CVMFS
[2026-03-30 18:33:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 18:33:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-30 18:33:46] apptainer works
[2026-03-30 18:33:46] Set ATHENA_PROC_NUMBER=12
[2026-03-30 18:33:46] Set ATHENA_CORE_NUMBER=12
[2026-03-30 18:33:46] Starting ATLAS job with PandaID=7071936317
[2026-03-30 18:33:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 19:48:31]  *** The last 200 lines of the pilot log: ***
[2026-03-30 19:48:31]  surl=/var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7071936317/log.49181484._000582.job.log.tgz.1
[2026-03-30 19:48:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/64/log.49181484._000582.job.log.tgz.1
[2026-03-30 19:48:31]  workdir=None
[2026-03-30 19:48:31] ]
[2026-03-30 19:48:31] 2026-03-30 17:47:51,371 | INFO     | transferring file log.49181484._000582.job.log.tgz.1 from /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7071936317/log.49181484._000582.job.log.tgz.1 to /var/lib/
[2026-03-30 19:48:31] 2026-03-30 17:47:51,371 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7071936317/log.49181484._000582.job.log.tgz.1 /var/lib/boinc/var/slot144/slots/1/
[2026-03-30 19:48:31] 2026-03-30 17:47:51,387 | INFO     | adding to output.list: log.49181484._000582.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/64/log.49181484._000582.job.log.tg
[2026-03-30 19:48:31] 2026-03-30 17:47:51,388 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-30 19:48:31] 2026-03-30 17:47:51,388 | INFO     | summary of transferred files:
[2026-03-30 19:48:31] 2026-03-30 17:47:51,388 | INFO     |  -- lfn=log.49181484._000582.job.log.tgz.1, status_code=0, status=transferred
[2026-03-30 19:48:31] 2026-03-30 17:47:51,388 | INFO     | stage-out finished correctly
[2026-03-30 19:48:31] 2026-03-30 17:47:52,797 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-30 19:48:31] 2026-03-30 17:47:53,103 | INFO     | time since job start (4436s) is within the limit (345600.0s)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,109 | INFO     | time since job start (4438s) is within the limit (345600.0s)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,747 | INFO     | job 7071936317 has state=finished
[2026-03-30 19:48:31] 2026-03-30 17:47:55,747 | INFO     | preparing for final server update for job 7071936317 in state='finished'
[2026-03-30 19:48:31] 2026-03-30 17:47:55,747 | INFO     | reading metadata from: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7071936317/jobReport.json
[2026-03-30 19:48:31] 2026-03-30 17:47:55,749 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot144/slots/1/workernode_map.json
[2026-03-30 19:48:31] 2026-03-30 17:47:55,750 | INFO     | this job has now completed (state=finished)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,750 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,750 | INFO     | log transfer has been attempted: DONE
[2026-03-30 19:48:31] 2026-03-30 17:47:55,750 | INFO     | job 7071936317 has finished - writing final server update
[2026-03-30 19:48:31] 2026-03-30 17:47:55,750 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1116938/.job.ad'
[2026-03-30 19:48:31] 2026-03-30 17:47:55,750 | INFO     | total number of processed events: 400 (read)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,772 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7071936317/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,773 | INFO     | extracted standard info from prmon json
[2026-03-30 19:48:31] 2026-03-30 17:47:55,773 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 19:48:31] 2026-03-30 17:47:55,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-30 19:48:31] 2026-03-30 17:47:55,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 19:48:31] 2026-03-30 17:47:55,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 19:48:31] 2026-03-30 17:47:55,774 | INFO     | fitting pss+swap vs Time
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | sum of square deviations: 89127252.5
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | sum of deviations: 491220129.00000006
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | mean x: 1774890745.5
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | mean y: 2710326.121212121
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | intersect: -9779505960.254454
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | chi2: 0.001275413165598168
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | current memory leak: 5.51 B/s (using 66 data points, chi2=0.00)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | could have reported an average CPU frequency of 3621 MHz (6 samples)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | ..............................
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | . Timing measurements:
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | . get job = 0 s
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | . initial setup = 4 s
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | . payload setup = 6 s
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | . stage-in = 0 s
[2026-03-30 19:48:31] 2026-03-30 17:47:55,775 | INFO     | . payload execution = 4412 s
[2026-03-30 19:48:31] 2026-03-30 17:47:55,776 | INFO     | . stage-out = 0 s
[2026-03-30 19:48:31] 2026-03-30 17:47:55,776 | INFO     | . log creation = 0 s
[2026-03-30 19:48:31] 2026-03-30 17:47:55,776 | INFO     | ..............................
[2026-03-30 19:48:31] 2026-03-30 17:47:55,824 | INFO     | 
[2026-03-30 19:48:31] 2026-03-30 17:47:55,824 | INFO     | job summary report
[2026-03-30 19:48:31] 2026-03-30 17:47:55,824 | INFO     | --------------------------------------------------
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | PanDA job id: 7071936317
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | task id: 49181484
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | errors: (none)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | pilot state: finished 
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | transexitcode: 0
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | exeerrorcode: 0
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | exeerrordiag: 
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | exitcode: 0
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | exitmsg: OK
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | cpuconsumptiontime: 48520 s
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | nevents: 400
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | neventsw: 0
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | pid: 2628614
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | pgrp: 2628614
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | corecount: 12
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | event service: False
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | sizes: {0: 2280009, 1: 2280271, 11: 2280299, 4422: 2306471, 4423: 2315493, 4425: 2315549, 4428: 2315871}
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | --------------------------------------------------
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | 
[2026-03-30 19:48:31] 2026-03-30 17:47:55,825 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/1
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,846 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,846 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 19:48:31] 2026-03-30 17:47:55,846 | INFO     | job 7071936317 has completed (purged errors)
[2026-03-30 19:48:31] 2026-03-30 17:47:55,846 | INFO     | overall cleanup function is called
[2026-03-30 19:48:31] 2026-03-30 17:47:56,452 | WARNING  | process 2628614 can no longer be monitored (due to stat problems) - aborting
[2026-03-30 19:48:31] 2026-03-30 17:47:56,854 | INFO     | --- collectZombieJob: --- 10, [2628614]
[2026-03-30 19:48:31] 2026-03-30 17:47:56,855 | INFO     | zombie collector waiting for pid 2628614
[2026-03-30 19:48:31] 2026-03-30 17:47:56,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 19:48:31] 2026-03-30 17:47:56,855 | INFO     | collected zombie processes
[2026-03-30 19:48:31] 2026-03-30 17:47:56,855 | INFO     | will attempt to kill all subprocesses of pid=2628614
[2026-03-30 19:48:31] 2026-03-30 17:47:58,931 | INFO     | PID=2622397 has CPU usage=19.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-30 19:48:31] 2026-03-30 17:47:58,932 | INFO     | .. there are 15 such processes running
[2026-03-30 19:48:31] 2026-03-30 17:47:58,933 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 19:48:31] 2026-03-30 17:47:58,934 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 19:48:31] 2026-03-30 17:47:58,934 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-30 19:48:31] 2026-03-30 17:47:58,934 | WARNING  | maxPSS not found in memory monitor output
[2026-03-30 19:48:31] 2026-03-30 17:47:58,935 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7071936317/payload.stdout) since it has not been created yet
[2026-03-30 19:48:31] 2026-03-30 17:47:58,935 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/1
[2026-03-30 19:48:31] 2026-03-30 17:47:58,949 | INFO     | sufficient remaining disk space (172744507392 B)
[2026-03-30 19:48:31] 2026-03-30 17:47:58,950 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-30 19:48:31] 2026-03-30 17:47:58,950 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7071936317/HITS.49181484._000582.pool.root.1 since it does not exist
[2026-03-30 19:48:31] 2026-03-30 17:47:59,213 | INFO     | process IDs to be killed: [2628614] (in reverse order)
[2026-03-30 19:48:31] 2026-03-30 17:47:59,365 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 19:48:31] 2026-03-30 17:47:59,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 19:48:31] 2026-03-30 17:47:59,431 | INFO     | did not find any defunct processes belonging to 2628614
[2026-03-30 19:48:31] 2026-03-30 17:47:59,498 | INFO     | did not find any defunct processes belonging to 2628614
[2026-03-30 19:48:31] 2026-03-30 17:47:59,498 | INFO     | ready for new job
[2026-03-30 19:48:31] 2026-03-30 17:47:59,498 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-30 19:48:31] 2026-03-30 17:47:59,499 | INFO     | **************************************
[2026-03-30 19:48:31] 2026-03-30 17:47:59,503 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-30 19:48:31] 2026-03-30 17:47:59,503 | INFO     | **************************************
[2026-03-30 19:48:31] 2026-03-30 17:47:59,503 | INFO     | 
[2026-03-30 19:48:31] 2026-03-30 17:47:59,512 | INFO     | architecture information:
[2026-03-30 19:48:31] 2026-03-30 17:47:59,512 | INFO     | executing command: cat /etc/os-release
[2026-03-30 19:48:31] 2026-03-30 17:47:59,529 | INFO     | cat /etc/os-release:
[2026-03-30 19:48:31] NAME="CentOS Linux"
[2026-03-30 19:48:31] VERSION="7 (Core)"
[2026-03-30 19:48:31] ID="centos"
[2026-03-30 19:48:31] ID_LIKE="rhel fedora"
[2026-03-30 19:48:31] VERSION_ID="7"
[2026-03-30 19:48:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 19:48:31] ANSI_COLOR="0;31"
[2026-03-30 19:48:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 19:48:31] HOME_URL="https://www.centos.org/"
[2026-03-30 19:48:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 19:48:31] 
[2026-03-30 19:48:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 19:48:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 19:48:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 19:48:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 19:48:31] 
[2026-03-30 19:48:31] 2026-03-30 17:47:59,530 | INFO     | **************************************
[2026-03-30 19:48:31] 2026-03-30 17:47:59,592 | INFO     | number of running child processes to parent process 2628614: 1
[2026-03-30 19:48:31] 2026-03-30 17:47:59,592 | INFO     | maximum number of monitored processes: 6
[2026-03-30 19:48:31] 2026-03-30 17:47:59,592 | INFO     | aborting job monitoring since job object (job id=7071936317) has expired
[2026-03-30 19:48:31] 2026-03-30 17:48:00,033 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/1
[2026-03-30 19:48:31] 2026-03-30 17:48:00,047 | INFO     | sufficient remaining disk space (172745555968 B)
[2026-03-30 19:48:31] 2026-03-30 17:48:00,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 19:48:31] 2026-03-30 17:48:00,048 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 19:48:31] 2026-03-30 17:48:00,048 | INFO     | update_server=False
[2026-03-30 19:48:31] 2026-03-30 17:48:00,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-30 19:48:31] 2026-03-30 17:48:00,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 19:48:31] 2026-03-30 17:48:00,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 19:48:31] 2026-03-30 17:48:00,049 | INFO     | will abort loop
[2026-03-30 19:48:31] 2026-03-30 17:48:00,197 | INFO     | all data control threads have been joined
[2026-03-30 19:48:31] 2026-03-30 17:48:00,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 19:48:31] 2026-03-30 17:48:01,001 | INFO     | all job control threads have been joined
[2026-03-30 19:48:31] 2026-03-30 17:48:01,032 | INFO     | all payload control threads have been joined
[2026-03-30 19:48:31] 2026-03-30 17:48:01,049 | INFO     | [job] job monitor thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:01,053 | INFO     | [job] retrieve thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:01,203 | INFO     | [data] control thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:01,434 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:01,449 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:01,611 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:01,681 | INFO     | [data] copytool_in thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:01,840 | INFO     | [job] queue monitor thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:01,869 | INFO     | [payload] failed_post thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:02,007 | INFO     | [job] control thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:02,037 | INFO     | [payload] control thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:02,054 | INFO     | [data] copytool_out thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:02,362 | INFO     | [payload] validate_post thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:02,498 | INFO     | [job] validate thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:03,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 19:48:31] 2026-03-30 17:48:03,834 | INFO     | [monitor] cgroup control has ended
[2026-03-30 19:48:31] 2026-03-30 17:48:07,361 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:10,592 | INFO     | job.realtimelogging is not enabled
[2026-03-30 19:48:31] 2026-03-30 17:48:11,596 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 19:48:31] 2026-03-30 17:48:12,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22438475122496)>', '<ExcThread(monitor, started 22438221166336)>']
[2026-03-30 19:48:31] 2026-03-30 17:48:17,856 | INFO     | all workflow threads have been joined
[2026-03-30 19:48:31] 2026-03-30 17:48:17,857 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 19:48:31] 2026-03-30 17:48:17,857 | INFO     | traces error code: 0
[2026-03-30 19:48:31] 2026-03-30 17:48:17,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 19:48:31] 2026-03-30 17:48:31,482 | INFO     | PID=2622397 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-30 19:48:31] 2026-03-30 17:48:31,482 | INFO     | .. there are 15 such processes running
[2026-03-30 19:48:31] 2026-03-30 17:48:31,483 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 19:48:31] 2026-03-30 17:48:31,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 19:48:31] 2026-03-30 17:48:31,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 19:48:31] 2026-03-30 17:48:31,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 19:48:31] 2026-03-30 17:48:31,483 | INFO     | [monitor] control thread has ended
[2026-03-30 19:48:31] 2026-03-30 17:48:31,609 [wrapper] ==== pilot stdout END ====
[2026-03-30 19:48:31] 2026-03-30 17:48:31,612 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 19:48:31] 2026-03-30 17:48:31,614 [wrapper] pilotpid: 2622397
[2026-03-30 19:48:31] 2026-03-30 17:48:31,616 [wrapper] Pilot exit status: 0
[2026-03-30 19:48:31] 2026-03-30 17:48:31,622 [wrapper] pandaids: 7071936317
[2026-03-30 19:48:31] 2026-03-30 17:48:31,728 [wrapper] cleanup supervisor_pilot 3024729 2622398
[2026-03-30 19:48:31] 2026-03-30 17:48:31,730 [wrapper] Test setup, not cleaning
[2026-03-30 19:48:31] 2026-03-30 17:48:31,732 [wrapper] apfmon messages muted
[2026-03-30 19:48:31] 2026-03-30 17:48:31,733 [wrapper] ==== wrapper stdout END ====
[2026-03-30 19:48:31] 2026-03-30 17:48:31,734 [wrapper] ==== wrapper stderr END ====
[2026-03-30 19:48:31]  *** Error codes and diagnostics ***
[2026-03-30 19:48:31]     "exeErrorCode": 0,
[2026-03-30 19:48:31]     "exeErrorDiag": "",
[2026-03-30 19:48:31]     "pilotErrorCode": 0,
[2026-03-30 19:48:31]     "pilotErrorDiag": "",
[2026-03-30 19:48:31]  *** Listing of results directory ***
[2026-03-30 19:48:31] total 474908
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc    585013 Mar 28 10:12 pilot3.tar.gz
[2026-03-30 19:48:31] -rwx------. 1 boinc boinc     36322 Mar 28 10:15 runpilot2-wrapper.sh
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc      5118 Mar 28 10:17 queuedata.json
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc       100 Mar 30 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 19:48:31] -rwxr-xr-x. 1 boinc boinc      7986 Mar 30 18:33 run_atlas
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc       105 Mar 30 18:33 job.xml
[2026-03-30 19:48:31] -rw-r--r--. 2 boinc boinc     15845 Mar 30 18:33 start_atlas.sh
[2026-03-30 19:48:31] drwxrwx--x. 2 boinc boinc      4096 Mar 30 18:33 shared
[2026-03-30 19:48:31] -rw-r--r--. 2 boinc boinc    597552 Mar 30 18:33 input.tar.gz
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc      6713 Mar 30 18:33 init_data.xml
[2026-03-30 19:48:31] -rw-r--r--. 2 boinc boinc 242622111 Mar 30 18:33 EVNT.49135163._000009.pool.root.1
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc         0 Mar 30 18:33 boinc_lockfile
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc      2618 Mar 30 18:33 pandaJob.out
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc   1004316 Mar 30 18:33 agis_schedconf.cvmfs.json
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc   1511579 Mar 30 18:33 agis_ddmendpoints.agis.ALL.json
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc       444 Mar 30 18:33 workernode_map.json
[2026-03-30 19:48:31] drwx------. 5 boinc boinc      4096 Mar 30 18:33 pilot3
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc 237676609 Mar 30 19:47 HITS.49181484._000582.pool.root.1
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc       529 Mar 30 19:47 boinc_task_state.xml
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc      1032 Mar 30 19:47 memory_monitor_summary.json
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc    376553 Mar 30 19:47 log.49181484._000582.job.log.tgz.1
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc      6352 Mar 30 19:47 heartbeat.json
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc      8192 Mar 30 19:48 boinc_mmap_file
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc        27 Mar 30 19:48 wrapper_checkpoint.txt
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc       823 Mar 30 19:48 pilotlog.txt
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc        95 Mar 30 19:48 pilot_heartbeat.json
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc    659855 Mar 30 19:48 log.49181484._000582.job.log.1
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc       357 Mar 30 19:48 output.list
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc       620 Mar 30 19:48 runtime_log
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc   1054720 Mar 30 19:48 result.tar.gz
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc       663 Mar 30 19:48 yfiNDmQweQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmlnHKDmYQWqJm.diag
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc      9223 Mar 30 19:48 runtime_log.err
[2026-03-30 19:48:31] -rw-r--r--. 1 boinc boinc     22461 Mar 30 19:48 stderr.txt
[2026-03-30 19:48:31] HITS file was successfully produced:
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc 237676609 Mar 30 19:47 shared/HITS.pool.root.1
[2026-03-30 19:48:31]  *** Contents of shared directory: ***
[2026-03-30 19:48:31] total 470684
[2026-03-30 19:48:31] -rw-r--r--. 2 boinc boinc     15845 Mar 30 18:33 start_atlas.sh
[2026-03-30 19:48:31] -rw-r--r--. 2 boinc boinc    597552 Mar 30 18:33 input.tar.gz
[2026-03-30 19:48:31] -rw-r--r--. 2 boinc boinc 242622111 Mar 30 18:33 ATLAS.root_0
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc 237676609 Mar 30 19:47 HITS.pool.root.1
[2026-03-30 19:48:31] -rw-------. 1 boinc boinc   1054720 Mar 30 19:48 result.tar.gz
19:48:33 (2617842): run_atlas exited; CPU time 48688.654764
19:48:33 (2617842): called boinc_finish(0)

</stderr_txt>
]]>

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