Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:26:01 (2571810): wrapper (7.7.26015): starting
22:26:01 (2571810): wrapper: running run_atlas (--nthreads 4)
[2026-03-30 22:26:01] Arguments: --nthreads 4
[2026-03-30 22:26:01] Threads: 4
[2026-03-30 22:26:01] Checking for CVMFS
[2026-03-30 22:26:01] No cvmfs_config command found, will try listing directly
[2026-03-30 22:26:01] CVMFS is ok
[2026-03-30 22:26:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-30 22:26:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-30 22:26:01] Further information can be found at the LHC@home message board.
[2026-03-30 22:26:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 22:26:01] Checking for apptainer binary...
[2026-03-30 22:26:01] which: no apptainer in ((null))
[2026-03-30 22:26:01] apptainer is not installed, using version from CVMFS
[2026-03-30 22:26:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 22:26:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-03-30 22:26:01] apptainer works
[2026-03-30 22:26:01] Set ATHENA_PROC_NUMBER=4
[2026-03-30 22:26:01] Set ATHENA_CORE_NUMBER=4
[2026-03-30 22:26:01] Starting ATLAS job with PandaID=7071890073
[2026-03-30 22:26:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-31 01:55:46]  *** The last 200 lines of the pilot log: ***
[2026-03-31 01:55:46] 2026-03-30 23:54:41,164 | INFO     | extracted standard info from prmon json
[2026-03-31 01:55:46] 2026-03-30 23:54:41,164 | INFO     | extracted standard memory fields from prmon json
[2026-03-31 01:55:46] 2026-03-30 23:54:41,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-31 01:55:46] 2026-03-30 23:54:41,165 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-31 01:55:46] 2026-03-30 23:54:41,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-31 01:55:46] 2026-03-30 23:54:41,169 | INFO     | fitting pss+swap vs Time
[2026-03-31 01:55:46] 2026-03-30 23:54:41,169 | INFO     | sum of square deviations: 2671343110.0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,170 | INFO     | sum of deviations: -48013353882.0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,171 | INFO     | mean x: 1774908628.0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,171 | INFO     | mean y: 2372877.6
[2026-03-31 01:55:46] 2026-03-30 23:54:41,171 | INFO     | intersect: 31903672169.842205
[2026-03-31 01:55:46] 2026-03-30 23:54:41,171 | INFO     | chi2: 2.302997549884315
[2026-03-31 01:55:46] 2026-03-30 23:54:41,171 | INFO     | sum of square deviations: 2480604650.0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,173 | INFO     | sum of deviations: -33859630479.5
[2026-03-31 01:55:46] 2026-03-30 23:54:41,173 | INFO     | mean x: 1774908475.5
[2026-03-31 01:55:46] 2026-03-30 23:54:41,173 | INFO     | mean y: 2383991.995
[2026-03-31 01:55:46] 2026-03-30 23:54:41,173 | INFO     | intersect: 24229438922.075325
[2026-03-31 01:55:46] 2026-03-30 23:54:41,173 | INFO     | chi2: 1.5182627339599881
[2026-03-31 01:55:46] 2026-03-30 23:54:41,173 | INFO     | current chi2=1.5182627339599881 (change=34.07449634341756 %)
[2026-03-31 01:55:46] 2026-03-30 23:54:41,174 | INFO     | sum of square deviations: 2299168690.0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,175 | INFO     | sum of deviations: -32737656838.99999
[2026-03-31 01:55:46] 2026-03-30 23:54:41,175 | INFO     | mean x: 1774908323.0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,175 | INFO     | mean y: 2384935.0512820515
[2026-03-31 01:55:46] 2026-03-30 23:54:41,175 | INFO     | intersect: 25275145412.256176
[2026-03-31 01:55:46] 2026-03-30 23:54:41,176 | INFO     | chi2: 1.5136531235227737
[2026-03-31 01:55:46] 2026-03-30 23:54:41,176 | INFO     | current chi2=1.5136531235227737 (change=0.3036108529906062 %)
[2026-03-31 01:55:46] 2026-03-30 23:54:41,176 | INFO     | right removable region: 194
[2026-03-31 01:55:46] 2026-03-30 23:54:41,176 | INFO     | sum of square deviations: 2480604650.0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,177 | INFO     | sum of deviations: -69336061567.00002
[2026-03-31 01:55:46] 2026-03-30 23:54:41,177 | INFO     | mean x: 1774908780.5
[2026-03-31 01:55:46] 2026-03-30 23:54:41,177 | INFO     | mean y: 2389620.81
[2026-03-31 01:55:46] 2026-03-30 23:54:41,177 | INFO     | intersect: 49613352206.30581
[2026-03-31 01:55:46] 2026-03-30 23:54:41,178 | INFO     | chi2: 1.0433355613226647
[2026-03-31 01:55:46] 2026-03-30 23:54:41,178 | INFO     | current chi2=1.0433355613226647 (change=54.69662738568376 %)
[2026-03-31 01:55:46] 2026-03-30 23:54:41,178 | INFO     | sum of square deviations: 2299168690.0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,179 | INFO     | sum of deviations: -59440893191.99999
[2026-03-31 01:55:46] 2026-03-30 23:54:41,179 | INFO     | mean x: 1774908933.0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,180 | INFO     | mean y: 2381299.117948718
[2026-03-31 01:55:46] 2026-03-30 23:54:41,180 | INFO     | intersect: 45889476391.72713
[2026-03-31 01:55:46] 2026-03-30 23:54:41,180 | INFO     | chi2: 1.0159933162027708
[2026-03-31 01:55:46] 2026-03-30 23:54:41,180 | INFO     | current chi2=1.0159933162027708 (change=2.620656875265654 %)
[2026-03-31 01:55:46] 2026-03-30 23:54:41,180 | INFO     | left removable region: 20
[2026-03-31 01:55:46] 2026-03-30 23:54:41,181 | INFO     | sum of square deviations: 1633472487.5
[2026-03-31 01:55:46] 2026-03-30 23:54:41,181 | INFO     | sum of deviations: -25363365863.0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,182 | INFO     | mean x: 1774908902.5
[2026-03-31 01:55:46] 2026-03-30 23:54:41,182 | INFO     | mean y: 2375509.9310344825
[2026-03-31 01:55:46] 2026-03-30 23:54:41,182 | INFO     | intersect: 27561862561.04263
[2026-03-31 01:55:46] 2026-03-30 23:54:41,182 | INFO     | chi2: 0.1108117378032416
[2026-03-31 01:55:46] 2026-03-30 23:54:41,182 | INFO     | current memory leak: -15.53 B/s (using 174 data points, chi2=0.11)
[2026-03-31 01:55:46] 2026-03-30 23:54:41,183 | INFO     | could have reported an average CPU frequency of 2674 MHz (10 samples)
[2026-03-31 01:55:46] 2026-03-30 23:54:41,183 | INFO     | ..............................
[2026-03-31 01:55:46] 2026-03-30 23:54:41,183 | INFO     | . Timing measurements:
[2026-03-31 01:55:46] 2026-03-30 23:54:41,183 | INFO     | . get job = 0 s
[2026-03-31 01:55:46] 2026-03-30 23:54:41,183 | INFO     | . initial setup = 6 s
[2026-03-31 01:55:46] 2026-03-30 23:54:41,183 | INFO     | . payload setup = 10 s
[2026-03-31 01:55:46] 2026-03-30 23:54:41,183 | INFO     | . stage-in = 0 s
[2026-03-31 01:55:46] 2026-03-30 23:54:41,183 | INFO     | . payload execution = 12474 s
[2026-03-31 01:55:46] 2026-03-30 23:54:41,183 | INFO     | . stage-out = 1 s
[2026-03-31 01:55:46] 2026-03-30 23:54:41,184 | INFO     | . log creation = 0 s
[2026-03-31 01:55:46] 2026-03-30 23:54:41,184 | INFO     | ..............................
[2026-03-31 01:55:46] 2026-03-30 23:54:41,530 | INFO     | 
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | job summary report
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | --------------------------------------------------
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | PanDA job id: 7071890073
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | task id: 48967011
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | errors: (none)
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | pilot state: finished 
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | transexitcode: 0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | exeerrorcode: 0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | exeerrordiag: 
[2026-03-31 01:55:46] 2026-03-30 23:54:41,531 | INFO     | exitcode: 0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | exitmsg: OK
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | cpuconsumptiontime: 48546 s
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | nevents: 400
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | neventsw: 0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | pid: 2581105
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | pgrp: 2581105
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | corecount: 4
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | event service: False
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | sizes: {0: 2279822, 1: 2280283, 11: 2280283, 12489: 2310063, 12490: 2310062, 12491: 2319460}
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | --------------------------------------------------
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | 
[2026-03-31 01:55:46] 2026-03-30 23:54:41,532 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-03-31 01:55:46] 2026-03-30 23:54:41,555 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,557 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-31 01:55:46] 2026-03-30 23:54:41,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,557 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-31 01:55:46] 2026-03-30 23:54:41,557 | INFO     | job 7071890073 has completed (purged errors)
[2026-03-31 01:55:46] 2026-03-30 23:54:41,557 | INFO     | overall cleanup function is called
[2026-03-31 01:55:46] 2026-03-30 23:54:42,565 | INFO     | --- collectZombieJob: --- 10, [2581105]
[2026-03-31 01:55:46] 2026-03-30 23:54:42,566 | INFO     | zombie collector waiting for pid 2581105
[2026-03-31 01:55:46] 2026-03-30 23:54:42,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-31 01:55:46] 2026-03-30 23:54:42,566 | INFO     | collected zombie processes
[2026-03-31 01:55:46] 2026-03-30 23:54:42,566 | INFO     | will attempt to kill all subprocesses of pid=2581105
[2026-03-31 01:55:46] 2026-03-30 23:54:42,937 | INFO     | process IDs to be killed: [2581105] (in reverse order)
[2026-03-31 01:55:46] 2026-03-30 23:54:43,066 | WARNING  | found no corresponding commands to process id(s)
[2026-03-31 01:55:46] 2026-03-30 23:54:43,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-31 01:55:46] 2026-03-30 23:54:43,079 | INFO     | did not find any defunct processes belonging to 2581105
[2026-03-31 01:55:46] 2026-03-30 23:54:43,091 | INFO     | did not find any defunct processes belonging to 2581105
[2026-03-31 01:55:46] 2026-03-30 23:54:43,091 | INFO     | ready for new job
[2026-03-31 01:55:46] 2026-03-30 23:54:43,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-31 01:55:46] 2026-03-30 23:54:43,094 | INFO     | **************************************
[2026-03-31 01:55:46] 2026-03-30 23:54:43,094 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-31 01:55:46] 2026-03-30 23:54:43,094 | INFO     | **************************************
[2026-03-31 01:55:46] 2026-03-30 23:54:43,094 | INFO     | 
[2026-03-31 01:55:46] 2026-03-30 23:54:43,098 | INFO     | architecture information:
[2026-03-31 01:55:46] 2026-03-30 23:54:43,098 | INFO     | executing command: cat /etc/os-release
[2026-03-31 01:55:46] 2026-03-30 23:54:43,116 | INFO     | cat /etc/os-release:
[2026-03-31 01:55:46] NAME="CentOS Linux"
[2026-03-31 01:55:46] VERSION="7 (Core)"
[2026-03-31 01:55:46] ID="centos"
[2026-03-31 01:55:46] ID_LIKE="rhel fedora"
[2026-03-31 01:55:46] VERSION_ID="7"
[2026-03-31 01:55:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-31 01:55:46] ANSI_COLOR="0;31"
[2026-03-31 01:55:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-31 01:55:46] HOME_URL="https://www.centos.org/"
[2026-03-31 01:55:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-31 01:55:46] 
[2026-03-31 01:55:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-31 01:55:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-31 01:55:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-31 01:55:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-31 01:55:46] 
[2026-03-31 01:55:46] 2026-03-30 23:54:43,116 | INFO     | **************************************
[2026-03-31 01:55:46] 2026-03-30 23:54:43,619 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-03-31 01:55:46] 2026-03-30 23:54:43,637 | INFO     | sufficient remaining disk space (31329353728 B)
[2026-03-31 01:55:46] 2026-03-30 23:54:43,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-31 01:55:46] 2026-03-30 23:54:43,638 | INFO     | current server update state: UPDATING_FINAL
[2026-03-31 01:55:46] 2026-03-30 23:54:43,638 | INFO     | update_server=False
[2026-03-31 01:55:46] 2026-03-30 23:54:43,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-31 01:55:46] 2026-03-30 23:54:43,724 | INFO     | all data control threads have been joined
[2026-03-31 01:55:46] 2026-03-30 23:54:44,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-31 01:55:46] 2026-03-30 23:54:44,293 | INFO     | all job control threads have been joined
[2026-03-31 01:55:46] 2026-03-30 23:54:44,640 | INFO     | [job] retrieve thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:44,710 | INFO     | all payload control threads have been joined
[2026-03-31 01:55:46] 2026-03-30 23:54:44,730 | INFO     | [data] control thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:44,779 | INFO     | [payload] validate_pre thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:44,916 | INFO     | [payload] execute_payloads thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:44,966 | INFO     | [payload] failed_post thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:45,131 | INFO     | [data] copytool_in thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:45,295 | INFO     | [job] control thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:45,424 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:45,651 | INFO     | [job] validate thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:45,663 | INFO     | [payload] validate_post thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:45,715 | INFO     | [payload] control thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:45,783 | WARNING  | process 2581105 can no longer be monitored (due to stat problems) - aborting
[2026-03-31 01:55:46] 2026-03-30 23:54:45,931 | INFO     | [job] create_data_payload thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:46,023 | INFO     | [data] copytool_out thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:46,106 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-31 01:55:46] 2026-03-30 23:54:46,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-31 01:55:46] 2026-03-30 23:54:46,478 | INFO     | number of running child processes to parent process 2581105: 1
[2026-03-31 01:55:46] 2026-03-30 23:54:46,478 | INFO     | maximum number of monitored processes: 6
[2026-03-31 01:55:46] 2026-03-30 23:54:46,478 | INFO     | aborting job monitoring since job object (job id=7071890073) has expired
[2026-03-31 01:55:46] 2026-03-30 23:54:46,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-31 01:55:46] 2026-03-30 23:54:46,479 | INFO     | will abort loop
[2026-03-31 01:55:46] 2026-03-30 23:54:47,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-31 01:55:46] 2026-03-30 23:54:47,292 | INFO     | [job] queue monitor thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:47,483 | INFO     | [job] job monitor thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:54:51,119 | INFO     | [data] queue_monitor thread has finished
[2026-03-31 01:55:46] 2026-03-30 23:55:14,516 | INFO     | PID=2576057 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-31 01:55:46] 2026-03-30 23:55:14,517 | INFO     | .. there are 11 such processes running
[2026-03-31 01:55:46] 2026-03-30 23:55:14,517 | INFO     | found 0 job(s) in 20 queues
[2026-03-31 01:55:46] 2026-03-30 23:55:14,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-31 01:55:46] 2026-03-30 23:55:14,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-31 01:55:46] 2026-03-30 23:55:38,811 | INFO     | [monitor] cgroup control has ended
[2026-03-31 01:55:46] 2026-03-30 23:55:40,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23109547784000)>', '<ExcThread(monitor, started 23109305636608)>']
[2026-03-31 01:55:46] 2026-03-30 23:55:41,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-31 01:55:46] 2026-03-30 23:55:41,633 | INFO     | [monitor] control thread has ended
[2026-03-31 01:55:46] 2026-03-30 23:55:45,750 | INFO     | all workflow threads have been joined
[2026-03-31 01:55:46] 2026-03-30 23:55:45,752 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-31 01:55:46] 2026-03-30 23:55:45,752 | INFO     | traces error code: 0
[2026-03-31 01:55:46] 2026-03-30 23:55:45,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-31 01:55:46] 2026-03-30 23:55:45,892 [wrapper] ==== pilot stdout END ====
[2026-03-31 01:55:46] 2026-03-30 23:55:45,894 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-31 01:55:46] 2026-03-30 23:55:45,897 [wrapper] pilotpid: 2576057
[2026-03-31 01:55:46] 2026-03-30 23:55:45,900 [wrapper] Pilot exit status: 0
[2026-03-31 01:55:46] 2026-03-30 23:55:45,911 [wrapper] pandaids: 7071890073
[2026-03-31 01:55:46] 2026-03-30 23:55:45,990 [wrapper] cleanup supervisor_pilot 2760716 2576058
[2026-03-31 01:55:46] 2026-03-30 23:55:45,993 [wrapper] Test setup, not cleaning
[2026-03-31 01:55:46] 2026-03-30 23:55:45,996 [wrapper] apfmon messages muted
[2026-03-31 01:55:46] 2026-03-30 23:55:45,999 [wrapper] ==== wrapper stdout END ====
[2026-03-31 01:55:46] 2026-03-30 23:55:46,001 [wrapper] ==== wrapper stderr END ====
[2026-03-31 01:55:46]  *** Error codes and diagnostics ***
[2026-03-31 01:55:46]     "exeErrorCode": 0,
[2026-03-31 01:55:46]     "exeErrorDiag": "",
[2026-03-31 01:55:46]     "pilotErrorCode": 0,
[2026-03-31 01:55:46]     "pilotErrorDiag": "",
[2026-03-31 01:55:46]  *** Listing of results directory ***
[2026-03-31 01:55:46] total 419560
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc    585013 Mar 29 00:22 pilot3.tar.gz
[2026-03-31 01:55:46] -rwx------. 1 boinc boinc     36322 Mar 29 00:24 runpilot2-wrapper.sh
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc      5118 Mar 29 00:26 queuedata.json
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc       100 Mar 30 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-31 01:55:46] -rwxr-xr-x. 1 boinc boinc      7986 Mar 30 22:25 run_atlas
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc       105 Mar 30 22:25 job.xml
[2026-03-31 01:55:46] -rw-r--r--. 2 boinc boinc 219494316 Mar 30 22:26 EVNT.48967008._000408.pool.root.1
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc      6562 Mar 30 22:26 init_data.xml
[2026-03-31 01:55:46] -rw-r--r--. 2 boinc boinc     15845 Mar 30 22:26 start_atlas.sh
[2026-03-31 01:55:46] drwxrwx--x. 2 boinc boinc      4096 Mar 30 22:26 shared
[2026-03-31 01:55:46] -rw-r--r--. 2 boinc boinc    597539 Mar 30 22:26 input.tar.gz
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc         0 Mar 30 22:26 boinc_lockfile
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc      2565 Mar 30 22:26 pandaJob.out
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc   1004000 Mar 30 22:26 agis_schedconf.cvmfs.json
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc       452 Mar 30 22:26 workernode_map.json
[2026-03-31 01:55:46] drwx------. 5 boinc boinc      4096 Mar 30 22:26 pilot3
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc 201910720 Mar 31 01:54 HITS.48967011._015842.pool.root.1
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc       530 Mar 31 01:54 boinc_task_state.xml
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc      1034 Mar 31 01:54 memory_monitor_summary.json
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc   1511579 Mar 31 01:54 agis_ddmendpoints.agis.ALL.json
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc    372270 Mar 31 01:54 log.48967011._015842.job.log.tgz.1
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc      6406 Mar 31 01:54 heartbeat.json
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc        95 Mar 31 01:55 pilot_heartbeat.json
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc      8192 Mar 31 01:55 boinc_mmap_file
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc        28 Mar 31 01:55 wrapper_checkpoint.txt
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc      5361 Mar 31 01:55 pilotlog.txt
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc   1769756 Mar 31 01:55 log.48967011._015842.job.log.1
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc       357 Mar 31 01:55 output.list
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc       620 Mar 31 01:55 runtime_log
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc   2160640 Mar 31 01:55 result.tar.gz
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc      9205 Mar 31 01:55 runtime_log.err
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc       664 Mar 31 01:55 D21LDmkBsQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmGYLKDmgQ21qm.diag
[2026-03-31 01:55:46] -rw-r--r--. 1 boinc boinc     20827 Mar 31 01:55 stderr.txt
[2026-03-31 01:55:46] HITS file was successfully produced:
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc 201910720 Mar 31 01:54 shared/HITS.pool.root.1
[2026-03-31 01:55:46]  *** Contents of shared directory: ***
[2026-03-31 01:55:46] total 414252
[2026-03-31 01:55:46] -rw-r--r--. 2 boinc boinc 219494316 Mar 30 22:26 ATLAS.root_0
[2026-03-31 01:55:46] -rw-r--r--. 2 boinc boinc     15845 Mar 30 22:26 start_atlas.sh
[2026-03-31 01:55:46] -rw-r--r--. 2 boinc boinc    597539 Mar 30 22:26 input.tar.gz
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc 201910720 Mar 31 01:54 HITS.pool.root.1
[2026-03-31 01:55:46] -rw-------. 1 boinc boinc   2160640 Mar 31 01:55 result.tar.gz
01:55:47 (2571810): run_atlas exited; CPU time 49078.467361
01:55:47 (2571810): called boinc_finish(0)

</stderr_txt>
]]>

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