Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:09:54 (857): wrapper (7.7.26015): starting
03:09:54 (857): wrapper: running run_atlas (--nthreads 8)
[2026-03-29 03:09:54] Arguments: --nthreads 8
[2026-03-29 03:09:54] Threads: 8
[2026-03-29 03:09:54] Checking for CVMFS
[2026-03-29 03:09:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 03:09:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 03:09:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 03:09:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 03:09:54] 2.11.0.0 6095 165155 89536 157824 3 188 3864277 4096001 4585 130560 1 16655941 99.748 8973598 331 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-29 03:09:54] CVMFS is ok
[2026-03-29 03:09:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 03:09:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-29 03:09:54] Further information can be found at the LHC@home message board.
[2026-03-29 03:09:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 03:09:54] Checking for apptainer binary...
[2026-03-29 03:09:54] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-29 03:09:54] apptainer is not installed, using version from CVMFS
[2026-03-29 03:09:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 03:09:55] WARNING: Environment variable TMPDIR already has value [/tmp/job_11424306/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node177
[2026-03-29 03:09:55] apptainer works
[2026-03-29 03:09:55] Set ATHENA_PROC_NUMBER=8
[2026-03-29 03:09:55] Set ATHENA_CORE_NUMBER=8
[2026-03-29 03:09:55] Starting ATLAS job with PandaID=7069698492
[2026-03-29 03:09:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11424306/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 04:03:34]  *** The last 200 lines of the pilot log: ***
[2026-03-29 04:03:34]  guid=5cc90576-b10c-406b-9ca8-87cc95f0e702
[2026-03-29 04:03:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-29 04:03:34]  is_altstaged=None
[2026-03-29 04:03:34]  is_tar=False
[2026-03-29 04:03:34]  lfn=log.49411707._000040.job.log.tgz.1
[2026-03-29 04:03:34]  mtime=0
[2026-03-29 04:03:34]  protocol_id=None
[2026-03-29 04:03:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-29 04:03:34]  replicas=None
[2026-03-29 04:03:34]  scope=mc23_13p6TeV
[2026-03-29 04:03:34]  status=None
[2026-03-29 04:03:34]  status_code=0
[2026-03-29 04:03:34]  storage_token=
[2026-03-29 04:03:34]  surl=/tmp/job_11424306/atlas/pilot/slots/0/PanDA_Pilot-7069698492/log.49411707._000040.job.log.tgz.1
[2026-03-29 04:03:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/36/log.49411707._000040.job.log.tgz.1
[2026-03-29 04:03:34]  workdir=None
[2026-03-29 04:03:34] ]
[2026-03-29 04:03:34] 2026-03-29 02:02:59,700 | INFO     | transferring file log.49411707._000040.job.log.tgz.1 from /tmp/job_11424306/atlas/pilot/slots/0/PanDA_Pilot-7069698492/log.49411707._000040.job.log.tgz.1 to /tmp/j
[2026-03-29 04:03:34] 2026-03-29 02:02:59,700 | INFO     | executing command: /usr/bin/env mv /tmp/job_11424306/atlas/pilot/slots/0/PanDA_Pilot-7069698492/log.49411707._000040.job.log.tgz.1 /tmp/job_11424306/atlas/pilot/sl
[2026-03-29 04:03:34] 2026-03-29 02:02:59,709 | INFO     | adding to output.list: log.49411707._000040.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/36/log.49411707._000040.job.log.tg
[2026-03-29 04:03:34] 2026-03-29 02:02:59,709 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-29 04:03:34] 2026-03-29 02:02:59,709 | INFO     | summary of transferred files:
[2026-03-29 04:03:34] 2026-03-29 02:02:59,709 | INFO     |  -- lfn=log.49411707._000040.job.log.tgz.1, status_code=0, status=transferred
[2026-03-29 04:03:34] 2026-03-29 02:02:59,709 | INFO     | stage-out finished correctly
[2026-03-29 04:03:34] 2026-03-29 02:02:59,761 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-29 04:03:34] 2026-03-29 02:03:00,710 | WARNING  | process 10022 can no longer be monitored (due to stat problems) - aborting
[2026-03-29 04:03:34] 2026-03-29 02:03:00,711 | INFO     | using path: /tmp/job_11424306/atlas/pilot/slots/0/PanDA_Pilot-7069698492/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 04:03:34] 2026-03-29 02:03:00,862 | INFO     | number of running child processes to parent process 10022: 1
[2026-03-29 04:03:34] 2026-03-29 02:03:00,862 | INFO     | maximum number of monitored processes: 6
[2026-03-29 04:03:34] 2026-03-29 02:03:01,492 | INFO     | time since job start (3178s) is within the limit (345600.0s)
[2026-03-29 04:03:34] 2026-03-29 02:03:01,915 | INFO     | job 7069698492 has state=finished
[2026-03-29 04:03:34] 2026-03-29 02:03:01,915 | INFO     | preparing for final server update for job 7069698492 in state='finished'
[2026-03-29 04:03:34] 2026-03-29 02:03:01,915 | INFO     | reading metadata from: /tmp/job_11424306/atlas/pilot/slots/0/PanDA_Pilot-7069698492/jobReport.json
[2026-03-29 04:03:34] 2026-03-29 02:03:01,917 | INFO     | added worker_node to metadata from /tmp/job_11424306/atlas/pilot/slots/0/workernode_map.json
[2026-03-29 04:03:34] 2026-03-29 02:03:01,917 | INFO     | this job has now completed (state=finished)
[2026-03-29 04:03:34] 2026-03-29 02:03:01,917 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 04:03:34] 2026-03-29 02:03:01,917 | INFO     | log transfer has been attempted: DONE
[2026-03-29 04:03:34] 2026-03-29 02:03:01,917 | INFO     | job 7069698492 has finished - writing final server update
[2026-03-29 04:03:34] 2026-03-29 02:03:01,917 | INFO     | total number of processed events: 400 (read)
[2026-03-29 04:03:34] 2026-03-29 02:03:01,940 | INFO     | using path: /tmp/job_11424306/atlas/pilot/slots/0/PanDA_Pilot-7069698492/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 04:03:34] 2026-03-29 02:03:01,941 | INFO     | extracted standard info from prmon json
[2026-03-29 04:03:34] 2026-03-29 02:03:01,941 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 04:03:34] 2026-03-29 02:03:01,941 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 04:03:34] 2026-03-29 02:03:01,941 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 04:03:34] 2026-03-29 02:03:01,941 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | fitting pss+swap vs Time
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | sum of square deviations: 28242390.0
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | sum of deviations: 495695149.99999994
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | mean x: 1774748268.0
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | mean y: 2542586.933333333
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | intersect: -31146878864.95158
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | chi2: 0.000811281341639778
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | current memory leak: 17.55 B/s (using 45 data points, chi2=0.00)
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | could have reported an average CPU frequency of 2560 MHz (5 samples)
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | ..............................
[2026-03-29 04:03:34] 2026-03-29 02:03:01,942 | INFO     | . Timing measurements:
[2026-03-29 04:03:34] 2026-03-29 02:03:01,943 | INFO     | . get job = 0 s
[2026-03-29 04:03:34] 2026-03-29 02:03:01,943 | INFO     | . initial setup = 3 s
[2026-03-29 04:03:34] 2026-03-29 02:03:01,943 | INFO     | . payload setup = 4 s
[2026-03-29 04:03:34] 2026-03-29 02:03:01,943 | INFO     | . stage-in = 0 s
[2026-03-29 04:03:34] 2026-03-29 02:03:01,943 | INFO     | . payload execution = 3157 s
[2026-03-29 04:03:34] 2026-03-29 02:03:01,943 | INFO     | . stage-out = 0 s
[2026-03-29 04:03:34] 2026-03-29 02:03:01,943 | INFO     | . log creation = 0 s
[2026-03-29 04:03:34] 2026-03-29 02:03:01,943 | INFO     | ..............................
[2026-03-29 04:03:34] 2026-03-29 02:03:01,991 | INFO     | 
[2026-03-29 04:03:34] 2026-03-29 02:03:01,991 | INFO     | job summary report
[2026-03-29 04:03:34] 2026-03-29 02:03:01,991 | INFO     | --------------------------------------------------
[2026-03-29 04:03:34] 2026-03-29 02:03:01,991 | INFO     | PanDA job id: 7069698492
[2026-03-29 04:03:34] 2026-03-29 02:03:01,991 | INFO     | task id: 49411707
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | errors: (none)
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | pilot state: finished 
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | transexitcode: 0
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | exeerrorcode: 0
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | exeerrordiag: 
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | exitcode: 0
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | exitmsg: OK
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | cpuconsumptiontime: 23350 s
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | nevents: 400
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | neventsw: 0
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | pid: 10022
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | pgrp: 10022
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | corecount: 8
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | event service: False
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | sizes: {0: 2280135, 1: 2280397, 11: 2280425, 3165: 2315039, 3168: 2315209}
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | --------------------------------------------------
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | 
[2026-03-29 04:03:34] 2026-03-29 02:03:01,992 | INFO     | executing command: ls -lF /tmp/job_11424306/atlas/pilot/slots/0
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,003 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 04:03:34] 2026-03-29 02:03:02,004 | INFO     | job 7069698492 has completed (purged errors)
[2026-03-29 04:03:34] 2026-03-29 02:03:02,004 | INFO     | overall cleanup function is called
[2026-03-29 04:03:34] 2026-03-29 02:03:03,009 | INFO     | --- collectZombieJob: --- 10, [10022]
[2026-03-29 04:03:34] 2026-03-29 02:03:03,010 | INFO     | zombie collector waiting for pid 10022
[2026-03-29 04:03:34] 2026-03-29 02:03:03,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 04:03:34] 2026-03-29 02:03:03,010 | INFO     | collected zombie processes
[2026-03-29 04:03:34] 2026-03-29 02:03:03,010 | INFO     | will attempt to kill all subprocesses of pid=10022
[2026-03-29 04:03:34] 2026-03-29 02:03:03,169 | INFO     | process IDs to be killed: [10022] (in reverse order)
[2026-03-29 04:03:34] 2026-03-29 02:03:03,215 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 04:03:34] 2026-03-29 02:03:03,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 04:03:34] 2026-03-29 02:03:03,222 | INFO     | did not find any defunct processes belonging to 10022
[2026-03-29 04:03:34] 2026-03-29 02:03:03,227 | INFO     | did not find any defunct processes belonging to 10022
[2026-03-29 04:03:34] 2026-03-29 02:03:03,227 | INFO     | ready for new job
[2026-03-29 04:03:34] 2026-03-29 02:03:03,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 04:03:34] 2026-03-29 02:03:03,228 | INFO     | **************************************
[2026-03-29 04:03:34] 2026-03-29 02:03:03,228 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 04:03:34] 2026-03-29 02:03:03,228 | INFO     | **************************************
[2026-03-29 04:03:34] 2026-03-29 02:03:03,228 | INFO     | 
[2026-03-29 04:03:34] 2026-03-29 02:03:03,245 | INFO     | architecture information:
[2026-03-29 04:03:34] 2026-03-29 02:03:03,245 | INFO     | executing command: cat /etc/os-release
[2026-03-29 04:03:34] 2026-03-29 02:03:03,252 | INFO     | cat /etc/os-release:
[2026-03-29 04:03:34] NAME="CentOS Linux"
[2026-03-29 04:03:34] VERSION="7 (Core)"
[2026-03-29 04:03:34] ID="centos"
[2026-03-29 04:03:34] ID_LIKE="rhel fedora"
[2026-03-29 04:03:34] VERSION_ID="7"
[2026-03-29 04:03:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 04:03:34] ANSI_COLOR="0;31"
[2026-03-29 04:03:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 04:03:34] HOME_URL="https://www.centos.org/"
[2026-03-29 04:03:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 04:03:34] 
[2026-03-29 04:03:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 04:03:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 04:03:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 04:03:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 04:03:34] 
[2026-03-29 04:03:34] 2026-03-29 02:03:03,252 | INFO     | **************************************
[2026-03-29 04:03:34] 2026-03-29 02:03:03,754 | INFO     | executing command: df -mP /tmp/job_11424306/atlas/pilot/slots/0
[2026-03-29 04:03:34] 2026-03-29 02:03:03,761 | INFO     | sufficient remaining disk space (224616513536 B)
[2026-03-29 04:03:34] 2026-03-29 02:03:03,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 04:03:34] 2026-03-29 02:03:03,761 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 04:03:34] 2026-03-29 02:03:03,761 | INFO     | update_server=False
[2026-03-29 04:03:34] 2026-03-29 02:03:03,761 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 04:03:34] 2026-03-29 02:03:03,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 04:03:34] 2026-03-29 02:03:03,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 04:03:34] 2026-03-29 02:03:03,843 | INFO     | all payload control threads have been joined
[2026-03-29 04:03:34] 2026-03-29 02:03:04,005 | INFO     | all data control threads have been joined
[2026-03-29 04:03:34] 2026-03-29 02:03:04,365 | INFO     | all job control threads have been joined
[2026-03-29 04:03:34] 2026-03-29 02:03:04,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 04:03:34] 2026-03-29 02:03:04,369 | INFO     | aborting loop
[2026-03-29 04:03:34] 2026-03-29 02:03:04,766 | INFO     | [job] retrieve thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:04,767 | INFO     | [job] queue monitor thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:04,848 | INFO     | [payload] control thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:05,006 | INFO     | [payload] validate_post thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:05,010 | INFO     | [data] control thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:05,370 | INFO     | [payload] failed_post thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:05,370 | INFO     | [job] control thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:05,374 | INFO     | [job] job monitor thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:05,451 | INFO     | [job] validate thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:05,567 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:05,579 | INFO     | job.realtimelogging is not enabled
[2026-03-29 04:03:34] 2026-03-29 02:03:05,595 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:05,766 | INFO     | [data] copytool_out thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:05,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 04:03:34] 2026-03-29 02:03:05,967 | INFO     | [data] copytool_in thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:06,162 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:06,584 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:07,940 | INFO     | [monitor] cgroup control has ended
[2026-03-29 04:03:34] 2026-03-29 02:03:09,822 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 04:03:34] 2026-03-29 02:03:09,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-29 04:03:34] 2026-03-29 02:03:14,911 | INFO     | all workflow threads have been joined
[2026-03-29 04:03:34] 2026-03-29 02:03:14,911 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 04:03:34] 2026-03-29 02:03:14,911 | INFO     | traces error code: 0
[2026-03-29 04:03:34] 2026-03-29 02:03:14,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 04:03:34] 2026-03-29 02:03:34,764 | INFO     | PID=5133 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-29 04:03:34] 2026-03-29 02:03:34,764 | INFO     | .. there are 2 such processes running
[2026-03-29 04:03:34] 2026-03-29 02:03:34,764 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 04:03:34] 2026-03-29 02:03:34,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 04:03:34] 2026-03-29 02:03:34,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 04:03:34] 2026-03-29 02:03:34,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 04:03:34] 2026-03-29 02:03:34,765 | INFO     | [monitor] control thread has ended
[2026-03-29 04:03:34] 2026-03-29 02:03:34,823 [wrapper] ==== pilot stdout END ====
[2026-03-29 04:03:34] 2026-03-29 02:03:34,825 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 04:03:34] 2026-03-29 02:03:34,826 [wrapper] pilotpid: 5133
[2026-03-29 04:03:34] 2026-03-29 02:03:34,827 [wrapper] Pilot exit status: 0
[2026-03-29 04:03:34] 2026-03-29 02:03:34,832 [wrapper] pandaids: 7069698492
[2026-03-29 04:03:34] 2026-03-29 02:03:34,864 [wrapper] cleanup supervisor_pilot  8312 5134
[2026-03-29 04:03:34] 2026-03-29 02:03:34,865 [wrapper] Test setup, not cleaning
[2026-03-29 04:03:34] 2026-03-29 02:03:34,867 [wrapper] apfmon messages muted
[2026-03-29 04:03:34] 2026-03-29 02:03:34,868 [wrapper] ==== wrapper stdout END ====
[2026-03-29 04:03:34] 2026-03-29 02:03:34,869 [wrapper] ==== wrapper stderr END ====
[2026-03-29 04:03:34]  *** Error codes and diagnostics ***
[2026-03-29 04:03:34]     "exeErrorCode": 0,
[2026-03-29 04:03:34]     "exeErrorDiag": "",
[2026-03-29 04:03:34]     "pilotErrorCode": 0,
[2026-03-29 04:03:34]     "pilotErrorDiag": "",
[2026-03-29 04:03:34]  *** Listing of results directory ***
[2026-03-29 04:03:35] total 466056
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user    585013 Mar 28 20:12 pilot3.tar.gz
[2026-03-29 04:03:35] -rwx------ 1 mf493845 unix-user     36322 Mar 28 20:12 runpilot2-wrapper.sh
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user      5118 Mar 28 20:13 queuedata.json
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user       100 Mar 29 00:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 04:03:35] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 29 00:58 run_atlas
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user       105 Mar 29 00:58 job.xml
[2026-03-29 04:03:35] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 29 03:09 start_atlas.sh
[2026-03-29 04:03:35] drwxrwx--x 2 mf493845 unix-user       100 Mar 29 03:09 shared
[2026-03-29 04:03:35] -rw-r--r-- 2 mf493845 unix-user    597539 Mar 29 03:09 input.tar.gz
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user      6390 Mar 29 03:09 init_data.xml
[2026-03-29 04:03:35] -rw-r--r-- 2 mf493845 unix-user 278716660 Mar 29 03:09 EVNT.49411705._000002.pool.root.1
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user         0 Mar 29 03:09 boinc_setup_complete
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user      8192 Mar 29 03:09 boinc_mmap_file
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user         0 Mar 29 03:09 boinc_lockfile
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user      2592 Mar 29 03:09 pandaJob.out
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user   1003389 Mar 29 03:10 agis_schedconf.cvmfs.json
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user   1511579 Mar 29 03:10 agis_ddmendpoints.agis.ALL.json
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user       417 Mar 29 03:10 workernode_map.json
[2026-03-29 04:03:35] drwx------ 5 mf493845 unix-user       440 Mar 29 03:10 pilot3
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user 193023261 Mar 29 04:02 HITS.49411707._000040.pool.root.1
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user      1020 Mar 29 04:02 memory_monitor_summary.json
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user    306037 Mar 29 04:02 log.49411707._000040.job.log.tgz.1
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user      6302 Mar 29 04:03 heartbeat.json
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user       819 Mar 29 04:03 pilotlog.txt
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user        95 Mar 29 04:03 pilot_heartbeat.json
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user    491954 Mar 29 04:03 log.49411707._000040.job.log.1
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user       357 Mar 29 04:03 output.list
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user       620 Mar 29 04:03 runtime_log
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user    819200 Mar 29 04:03 result.tar.gz
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user      9219 Mar 29 04:03 runtime_log.err
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user       641 Mar 29 04:03 ajSMDmYGoQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmV1KKDmGisrHo.diag
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user     21870 Mar 29 04:03 stderr.txt
[2026-03-29 04:03:35] HITS file was successfully produced:
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user 193023261 Mar 29 04:02 shared/HITS.pool.root.1
[2026-03-29 04:03:35]  *** Contents of shared directory: ***
[2026-03-29 04:03:35] total 462088
[2026-03-29 04:03:35] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 29 03:09 start_atlas.sh
[2026-03-29 04:03:35] -rw-r--r-- 2 mf493845 unix-user    597539 Mar 29 03:09 input.tar.gz
[2026-03-29 04:03:35] -rw-r--r-- 2 mf493845 unix-user 278716660 Mar 29 03:09 ATLAS.root_0
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user 193023261 Mar 29 04:02 HITS.pool.root.1
[2026-03-29 04:03:35] -rw------- 1 mf493845 unix-user    819200 Mar 29 04:03 result.tar.gz
04:03:36 (857): run_atlas exited; CPU time 23428.396598
04:03:36 (857): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN