Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:53:47 (3482656): wrapper (7.7.26015): starting
20:53:47 (3482656): wrapper: running run_atlas (--nthreads 2)
[2026-03-29 20:53:47] Arguments: --nthreads 2
[2026-03-29 20:53:47] Threads: 2
[2026-03-29 20:53:47] Checking for CVMFS
[2026-03-29 20:53:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 20:53:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 20:53:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 20:53:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 20:53:47] 2.9.2.0 3274070 2329 56416 157852 3 50 27582645 36864001 0 130560 0 519597 99.966 90204 17994 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-29 20:53:47] CVMFS is ok
[2026-03-29 20:53:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-29 20:53:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-29 20:53:47] Further information can be found at the LHC@home message board.
[2026-03-29 20:53:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 20:53:47] Checking for apptainer binary...
[2026-03-29 20:53:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-29 20:53:47] Running /usr/bin/apptainer --version
[2026-03-29 20:53:47] apptainer version 1.4.1-1.1
[2026-03-29 20:53:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 20:53:47] atlasA219
[2026-03-29 20:53:47] apptainer works
[2026-03-29 20:53:47] Set ATHENA_PROC_NUMBER=2
[2026-03-29 20:53:47] Set ATHENA_CORE_NUMBER=2
[2026-03-29 20:53:47] Starting ATLAS job with PandaID=7071845356
[2026-03-29 20:53:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 23:33:23]  *** The last 200 lines of the pilot log: ***
[2026-03-29 23:33:23] 2026-03-29 21:32:53,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 23:33:23] 2026-03-29 21:32:53,480 | INFO     | all job control threads have been joined
[2026-03-29 23:33:23] 2026-03-29 21:32:53,826 | INFO     | [job] retrieve thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:53,826 | INFO     | [job] queue monitor thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:53,838 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:53,882 | INFO     | [payload] control thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:53,922 | INFO     | [job] job monitor thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:53,989 | INFO     | [data] copytool_in thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:54,149 | INFO     | [data] control thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:54,438 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:54,485 | INFO     | [job] control thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:54,764 | INFO     | [payload] validate_post thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:54,805 | INFO     | job.realtimelogging is not enabled
[2026-03-29 23:33:23] 2026-03-29 21:32:55,151 | INFO     | [data] copytool_out thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:55,279 | INFO     | [payload] failed_post thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:55,308 | INFO     | [job] validate thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:55,311 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:55,809 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:32:56,826 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 23:33:23] 2026-03-29 21:33:11,291 | INFO     | [monitor] cgroup control has ended
[2026-03-29 23:33:23] 2026-03-29 21:33:13,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770351081280)>', '<ExcThread(monitor, started 139769635923712)>']
[2026-03-29 23:33:23] 2026-03-29 21:33:18,205 | INFO     | all workflow threads have been joined
[2026-03-29 23:33:23] 2026-03-29 21:33:18,205 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 23:33:23] 2026-03-29 21:33:18,205 | INFO     | traces error code: 0
[2026-03-29 23:33:23] 2026-03-29 21:33:18,205 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 23:33:23] 2026-03-29 21:33:23,049 | INFO     | PID=3486686 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-29 23:33:23] 2026-03-29 21:33:23,050 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 23:33:23] 2026-03-29 21:33:23,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 23:33:23] 2026-03-29 21:33:23,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 23:33:23] 2026-03-29 21:33:23,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 23:33:23] 2026-03-29 21:33:23,050 | INFO     | [monitor] control thread has ended
[2026-03-29 23:33:23] 2026-03-29 21:33:23,090 [wrapper] ==== pilot stdout END ====
[2026-03-29 23:33:23] 2026-03-29 21:33:23,093 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 23:33:23] 2026-03-29 21:33:23,096 [wrapper] pilotpid: 3486686
[2026-03-29 23:33:23] 2026-03-29 21:33:23,099 [wrapper] Pilot exit status: 0
[2026-03-29 23:33:23] 2026-03-29 21:33:23,106 [wrapper] pandaids: 7071845356
[2026-03-29 23:33:23] 2026-03-29 21:33:23,122 [wrapper] cleanup supervisor_pilot 3501621 3486687
[2026-03-29 23:33:23] 2026-03-29 21:33:23,124 [wrapper] Test setup, not cleaning
[2026-03-29 23:33:23] 2026-03-29 21:33:23,127 [wrapper] apfmon messages muted
[2026-03-29 23:33:23] 2026-03-29 21:33:23,130 [wrapper] ==== wrapper stdout END ====
[2026-03-29 23:33:23] 2026-03-29 21:33:23,132 [wrapper] ==== wrapper stderr END ====
[2026-03-29 23:33:23]  *** Error codes and diagnostics ***
[2026-03-29 23:33:23]     "exeErrorCode": 0,
[2026-03-29 23:33:23]     "exeErrorDiag": "",
[2026-03-29 23:33:23]     "pilotErrorCode": 0,
[2026-03-29 23:33:23]     "pilotErrorDiag": "",
[2026-03-29 23:33:23]  *** Listing of results directory ***
[2026-03-29 23:33:23] total 411228
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc      5118 Mar 28 23:06 queuedata.json
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc    585013 Mar 28 23:06 pilot3.tar.gz
[2026-03-29 23:33:23] -rwx------ 1 boinc boinc     36322 Mar 28 23:07 runpilot2-wrapper.sh
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc       100 Mar 29 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 23:33:23] -rwxr-xr-x 1 boinc boinc      7986 Mar 29 20:53 run_atlas
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc       105 Mar 29 20:53 job.xml
[2026-03-29 23:33:23] -rw-r--r-- 2 boinc boinc 213005683 Mar 29 20:53 EVNT.48967083._000209.pool.root.1
[2026-03-29 23:33:23] -rw-r--r-- 2 boinc boinc    597534 Mar 29 20:53 input.tar.gz
[2026-03-29 23:33:23] -rw-r--r-- 2 boinc boinc     15845 Mar 29 20:53 start_atlas.sh
[2026-03-29 23:33:23] drwxrwx--x 2 boinc boinc      4096 Mar 29 20:53 shared
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc         0 Mar 29 20:53 boinc_setup_complete
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc      6207 Mar 29 20:53 init_data.xml
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc         0 Mar 29 20:53 boinc_lockfile
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc      2563 Mar 29 20:53 pandaJob.out
[2026-03-29 23:33:23] -rw------- 1 boinc boinc   1004063 Mar 29 20:53 agis_schedconf.cvmfs.json
[2026-03-29 23:33:23] -rw------- 1 boinc boinc   1511579 Mar 29 20:53 agis_ddmendpoints.agis.ALL.json
[2026-03-29 23:33:23] -rw------- 1 boinc boinc       421 Mar 29 20:53 workernode_map.json
[2026-03-29 23:33:23] drwx------ 5 boinc boinc      4096 Mar 29 20:53 pilot3
[2026-03-29 23:33:23] -rw------- 1 boinc boinc 200860220 Mar 29 23:32 HITS.48967085._028872.pool.root.1
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc       529 Mar 29 23:32 boinc_task_state.xml
[2026-03-29 23:33:23] -rw------- 1 boinc boinc      1014 Mar 29 23:32 memory_monitor_summary.json
[2026-03-29 23:33:23] -rw------- 1 boinc boinc        95 Mar 29 23:32 pilot_heartbeat.json
[2026-03-29 23:33:23] -rw------- 1 boinc boinc    301964 Mar 29 23:32 log.48967085._028872.job.log.tgz.1
[2026-03-29 23:33:23] -rw------- 1 boinc boinc      6295 Mar 29 23:32 heartbeat.json
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc      8192 Mar 29 23:33 boinc_mmap_file
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc        27 Mar 29 23:33 wrapper_checkpoint.txt
[2026-03-29 23:33:23] -rw------- 1 boinc boinc       747 Mar 29 23:33 pilotlog.txt
[2026-03-29 23:33:23] -rw------- 1 boinc boinc   1355577 Mar 29 23:33 log.48967085._028872.job.log.1
[2026-03-29 23:33:23] -rw------- 1 boinc boinc       357 Mar 29 23:33 output.list
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc       620 Mar 29 23:33 runtime_log
[2026-03-29 23:33:23] -rw------- 1 boinc boinc   1679360 Mar 29 23:33 result.tar.gz
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc      8911 Mar 29 23:33 runtime_log.err
[2026-03-29 23:33:23] -rw------- 1 boinc boinc       662 Mar 29 23:33 OGkMDmDzqQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmsGLKDmHBWd3m.diag
[2026-03-29 23:33:23] -rw-r--r-- 1 boinc boinc      6624 Mar 29 23:33 stderr.txt
[2026-03-29 23:33:23] HITS file was successfully produced:
[2026-03-29 23:33:23] -rw------- 1 boinc boinc 200860220 Mar 29 23:32 shared/HITS.pool.root.1
[2026-03-29 23:33:23]  *** Contents of shared directory: ***
[2026-03-29 23:33:23] total 406416
[2026-03-29 23:33:23] -rw-r--r-- 2 boinc boinc 213005683 Mar 29 20:53 ATLAS.root_0
[2026-03-29 23:33:23] -rw-r--r-- 2 boinc boinc    597534 Mar 29 20:53 input.tar.gz
[2026-03-29 23:33:23] -rw-r--r-- 2 boinc boinc     15845 Mar 29 20:53 start_atlas.sh
[2026-03-29 23:33:23] -rw------- 1 boinc boinc 200860220 Mar 29 23:32 HITS.pool.root.1
[2026-03-29 23:33:23] -rw------- 1 boinc boinc   1679360 Mar 29 23:33 result.tar.gz
23:33:24 (3482656): run_atlas exited; CPU time 18491.355126
23:33:24 (3482656): called boinc_finish(0)

</stderr_txt>
]]>

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