Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:01:11 (4069989): wrapper (7.7.26015): starting
01:01:11 (4069989): wrapper: running run_atlas (--nthreads 12)
[2026-04-05 01:01:11] Arguments: --nthreads 12
[2026-04-05 01:01:11] Threads: 12
[2026-04-05 01:01:11] Checking for CVMFS
[2026-04-05 01:01:11] No cvmfs_config command found, will try listing directly
[2026-04-05 01:01:11] CVMFS is ok
[2026-04-05 01:01:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 01:01:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 01:01:11] Further information can be found at the LHC@home message board.
[2026-04-05 01:01:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 01:01:11] Checking for apptainer binary...
[2026-04-05 01:01:11] which: no apptainer in ((null))
[2026-04-05 01:01:11] apptainer is not installed, using version from CVMFS
[2026-04-05 01:01:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 01:01:11] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/12/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-04-05 01:01:11] apptainer works
[2026-04-05 01:01:11] Set ATHENA_PROC_NUMBER=12
[2026-04-05 01:01:11] Set ATHENA_CORE_NUMBER=12
[2026-04-05 01:01:11] Starting ATLAS job with PandaID=7069719358
[2026-04-05 01:01:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 01:24:27]  *** The last 200 lines of the pilot log: ***
[2026-04-05 01:24:27]  filetype=log
[2026-04-05 01:24:27]  guid=495151c7-2822-45fe-bf5a-4ad115abc978
[2026-04-05 01:24:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-05 01:24:27]  is_altstaged=None
[2026-04-05 01:24:27]  is_tar=False
[2026-04-05 01:24:27]  lfn=log.48967102._005316.job.log.tgz.1
[2026-04-05 01:24:27]  mtime=0
[2026-04-05 01:24:27]  protocol_id=None
[2026-04-05 01:24:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-05 01:24:27]  replicas=None
[2026-04-05 01:24:27]  scope=mc23_13p6TeV
[2026-04-05 01:24:27]  status=None
[2026-04-05 01:24:27]  status_code=0
[2026-04-05 01:24:27]  storage_token=
[2026-04-05 01:24:27]  surl=/var/lib/boinc/var/slot60/slots/12/PanDA_Pilot-7069719358/log.48967102._005316.job.log.tgz.1
[2026-04-05 01:24:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/02/log.48967102._005316.job.log.tgz.1
[2026-04-05 01:24:27]  workdir=None
[2026-04-05 01:24:27] ]
[2026-04-05 01:24:27] 2026-04-04 23:23:49,698 | INFO     | transferring file log.48967102._005316.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/12/PanDA_Pilot-7069719358/log.48967102._005316.job.log.tgz.1 to /var/lib/
[2026-04-05 01:24:27] 2026-04-04 23:23:49,698 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/12/PanDA_Pilot-7069719358/log.48967102._005316.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/12/
[2026-04-05 01:24:27] 2026-04-04 23:23:49,708 | INFO     | adding to output.list: log.48967102._005316.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/02/log.48967102._005316.job.log.tg
[2026-04-05 01:24:27] 2026-04-04 23:23:49,708 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-05 01:24:27] 2026-04-04 23:23:49,708 | INFO     | summary of transferred files:
[2026-04-05 01:24:27] 2026-04-04 23:23:49,708 | INFO     |  -- lfn=log.48967102._005316.job.log.tgz.1, status_code=0, status=transferred
[2026-04-05 01:24:27] 2026-04-04 23:23:49,708 | INFO     | stage-out finished correctly
[2026-04-05 01:24:27] 2026-04-04 23:23:50,056 | INFO     | time since job start (1352s) is within the limit (345600.0s)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,400 | INFO     | monitor loop #107: job 0:7069719358 is in state 'finished'
[2026-04-05 01:24:27] 2026-04-04 23:23:51,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,643 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-05 01:24:27] 2026-04-04 23:23:51,666 | INFO     | job 7069719358 has state=finished
[2026-04-05 01:24:27] 2026-04-04 23:23:51,666 | INFO     | preparing for final server update for job 7069719358 in state='finished'
[2026-04-05 01:24:27] 2026-04-04 23:23:51,666 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/12/PanDA_Pilot-7069719358/jobReport.json
[2026-04-05 01:24:27] 2026-04-04 23:23:51,667 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/12/workernode_map.json
[2026-04-05 01:24:27] 2026-04-04 23:23:51,667 | INFO     | this job has now completed (state=finished)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,667 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,667 | INFO     | log transfer has been attempted: DONE
[2026-04-05 01:24:27] 2026-04-04 23:23:51,667 | INFO     | job 7069719358 has finished - writing final server update
[2026-04-05 01:24:27] 2026-04-04 23:23:51,667 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3967462/.job.ad'
[2026-04-05 01:24:27] 2026-04-04 23:23:51,667 | INFO     | total number of processed events: 400 (read)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,676 | INFO     | using path: /var/lib/boinc/var/slot60/slots/12/PanDA_Pilot-7069719358/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,676 | INFO     | extracted standard info from prmon json
[2026-04-05 01:24:27] 2026-04-04 23:23:51,676 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 01:24:27] 2026-04-04 23:23:51,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-05 01:24:27] 2026-04-04 23:23:51,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | fitting pss+swap vs Time
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | sum of square deviations: 1041880.0
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | sum of deviations: -697614910.0
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | mean x: 1775344428.0
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | mean y: 2954523.7333333334
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | intersect: 1188725977672.485
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | chi2: 0.020685944250080218
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | current memory leak: -669.57 B/s (using 15 data points, chi2=0.02)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | could have reported an average CPU frequency of 3532 MHz (4 samples)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | ..............................
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | . Timing measurements:
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | . get job = 0 s
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | . initial setup = 3 s
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | . payload setup = 3 s
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | . stage-in = 0 s
[2026-04-05 01:24:27] 2026-04-04 23:23:51,677 | INFO     | . payload execution = 1332 s
[2026-04-05 01:24:27] 2026-04-04 23:23:51,678 | INFO     | . stage-out = 0 s
[2026-04-05 01:24:27] 2026-04-04 23:23:51,678 | INFO     | . log creation = 0 s
[2026-04-05 01:24:27] 2026-04-04 23:23:51,678 | INFO     | ..............................
[2026-04-05 01:24:27] 2026-04-04 23:23:51,700 | INFO     | 
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | job summary report
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | --------------------------------------------------
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | PanDA job id: 7069719358
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | task id: 48967102
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | errors: (none)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | pilot state: finished 
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | transexitcode: 0
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | exeerrorcode: 0
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | exeerrordiag: 
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | exitcode: 0
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | exitmsg: OK
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | cpuconsumptiontime: 13934 s
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | nevents: 400
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | neventsw: 0
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | pid: 4080467
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | pgrp: 4080467
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | corecount: 12
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | event service: False
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | sizes: {0: 2280216, 10: 2280216, 1340: 2313896, 1342: 2314090}
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | --------------------------------------------------
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | 
[2026-04-05 01:24:27] 2026-04-04 23:23:51,701 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/12
[2026-04-05 01:24:27] 2026-04-04 23:23:51,713 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | job 7069719358 has completed (purged errors)
[2026-04-05 01:24:27] 2026-04-04 23:23:51,714 | INFO     | overall cleanup function is called
[2026-04-05 01:24:27] 2026-04-04 23:23:52,721 | INFO     | --- collectZombieJob: --- 10, [4080467]
[2026-04-05 01:24:27] 2026-04-04 23:23:52,721 | INFO     | zombie collector waiting for pid 4080467
[2026-04-05 01:24:27] 2026-04-04 23:23:52,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 01:24:27] 2026-04-04 23:23:52,721 | INFO     | collected zombie processes
[2026-04-05 01:24:27] 2026-04-04 23:23:52,721 | INFO     | will attempt to kill all subprocesses of pid=4080467
[2026-04-05 01:24:27] 2026-04-04 23:23:52,879 | INFO     | process IDs to be killed: [4080467] (in reverse order)
[2026-04-05 01:24:27] 2026-04-04 23:23:52,957 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 01:24:27] 2026-04-04 23:23:52,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 01:24:27] 2026-04-04 23:23:52,972 | INFO     | did not find any defunct processes belonging to 4080467
[2026-04-05 01:24:27] 2026-04-04 23:23:52,984 | INFO     | did not find any defunct processes belonging to 4080467
[2026-04-05 01:24:27] 2026-04-04 23:23:52,984 | INFO     | ready for new job
[2026-04-05 01:24:27] 2026-04-04 23:23:52,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-05 01:24:27] 2026-04-04 23:23:52,984 | INFO     | **************************************
[2026-04-05 01:24:27] 2026-04-04 23:23:52,984 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-05 01:24:27] 2026-04-04 23:23:52,984 | INFO     | **************************************
[2026-04-05 01:24:27] 2026-04-04 23:23:52,984 | INFO     | 
[2026-04-05 01:24:27] 2026-04-04 23:23:52,987 | INFO     | architecture information:
[2026-04-05 01:24:27] 2026-04-04 23:23:52,987 | INFO     | executing command: cat /etc/os-release
[2026-04-05 01:24:27] 2026-04-04 23:23:52,995 | INFO     | cat /etc/os-release:
[2026-04-05 01:24:27] NAME="CentOS Linux"
[2026-04-05 01:24:27] VERSION="7 (Core)"
[2026-04-05 01:24:27] ID="centos"
[2026-04-05 01:24:27] ID_LIKE="rhel fedora"
[2026-04-05 01:24:27] VERSION_ID="7"
[2026-04-05 01:24:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 01:24:27] ANSI_COLOR="0;31"
[2026-04-05 01:24:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 01:24:27] HOME_URL="https://www.centos.org/"
[2026-04-05 01:24:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 01:24:27] 
[2026-04-05 01:24:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 01:24:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 01:24:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 01:24:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 01:24:27] 
[2026-04-05 01:24:27] 2026-04-04 23:23:52,995 | INFO     | **************************************
[2026-04-05 01:24:27] 2026-04-04 23:23:53,498 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/12
[2026-04-05 01:24:27] 2026-04-04 23:23:53,509 | INFO     | sufficient remaining disk space (325075337216 B)
[2026-04-05 01:24:27] 2026-04-04 23:23:53,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 01:24:27] 2026-04-04 23:23:53,510 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 01:24:27] 2026-04-04 23:23:53,510 | INFO     | update_server=False
[2026-04-05 01:24:27] 2026-04-04 23:23:53,510 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-05 01:24:27] 2026-04-04 23:23:53,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 01:24:27] 2026-04-04 23:23:53,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 01:24:27] 2026-04-04 23:23:53,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 01:24:27] 2026-04-04 23:23:53,565 | INFO     | all job control threads have been joined
[2026-04-05 01:24:27] 2026-04-04 23:23:53,904 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-05 01:24:27] 2026-04-04 23:23:53,907 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-05 01:24:27] 2026-04-04 23:23:53,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 01:24:27] 2026-04-04 23:23:53,907 | INFO     | will abort loop
[2026-04-05 01:24:27] 2026-04-04 23:23:54,515 | INFO     | [job] retrieve thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:54,516 | INFO     | [job] queue monitor thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:54,571 | INFO     | [job] control thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:54,576 | INFO     | all data control threads have been joined
[2026-04-05 01:24:27] 2026-04-04 23:23:54,912 | INFO     | [job] job monitor thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:54,913 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:54,953 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:54,971 | INFO     | all payload control threads have been joined
[2026-04-05 01:24:27] 2026-04-04 23:23:55,238 | INFO     | [payload] validate_post thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:55,255 | INFO     | [job] validate thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:55,264 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:55,266 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:55,422 | INFO     | [data] copytool_in thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:55,501 | INFO     | [payload] failed_post thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:55,516 | INFO     | [data] copytool_out thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:55,581 | INFO     | [data] control thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:55,976 | INFO     | [payload] control thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:23:57,516 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 01:24:27] 2026-04-04 23:24:20,296 | INFO     | [monitor] cgroup control has ended
[2026-04-05 01:24:27] 2026-04-04 23:24:21,858 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22811266746176)>', '<ExcThread(monitor, started 22811027711744)>']
[2026-04-05 01:24:27] 2026-04-04 23:24:23,342 | INFO     | PID=4074770 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 01:24:27] 2026-04-04 23:24:23,343 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 01:24:27] 2026-04-04 23:24:23,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 01:24:27] 2026-04-04 23:24:23,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 01:24:27] 2026-04-04 23:24:23,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 01:24:27] 2026-04-04 23:24:23,343 | INFO     | [monitor] control thread has ended
[2026-04-05 01:24:27] 2026-04-04 23:24:26,884 | INFO     | all workflow threads have been joined
[2026-04-05 01:24:27] 2026-04-04 23:24:26,884 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 01:24:27] 2026-04-04 23:24:26,884 | INFO     | traces error code: 0
[2026-04-05 01:24:27] 2026-04-04 23:24:26,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 01:24:27] 2026-04-04 23:24:26,944 [wrapper] ==== pilot stdout END ====
[2026-04-05 01:24:27] 2026-04-04 23:24:26,946 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 01:24:27] 2026-04-04 23:24:26,948 [wrapper] pilotpid: 4074770
[2026-04-05 01:24:27] 2026-04-04 23:24:26,949 [wrapper] Pilot exit status: 0
[2026-04-05 01:24:27] 2026-04-04 23:24:26,957 [wrapper] pandaids: 7069719358
[2026-04-05 01:24:27] 2026-04-04 23:24:27,017 [wrapper] cleanup supervisor_pilot 4097629 4074771
[2026-04-05 01:24:27] 2026-04-04 23:24:27,018 [wrapper] Test setup, not cleaning
[2026-04-05 01:24:27] 2026-04-04 23:24:27,020 [wrapper] apfmon messages muted
[2026-04-05 01:24:27] 2026-04-04 23:24:27,021 [wrapper] ==== wrapper stdout END ====
[2026-04-05 01:24:27] 2026-04-04 23:24:27,023 [wrapper] ==== wrapper stderr END ====
[2026-04-05 01:24:27]  *** Error codes and diagnostics ***
[2026-04-05 01:24:27]     "exeErrorCode": 0,
[2026-04-05 01:24:27]     "exeErrorDiag": "",
[2026-04-05 01:24:27]     "pilotErrorCode": 0,
[2026-04-05 01:24:27]     "pilotErrorDiag": "",
[2026-04-05 01:24:27]  *** Listing of results directory ***
[2026-04-05 01:24:27] total 409560
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc    585013 Mar 28 21:17 pilot3.tar.gz
[2026-04-05 01:24:27] -rwx------. 1 boinc boinc     36322 Mar 28 21:20 runpilot2-wrapper.sh
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc      5118 Mar 28 21:21 queuedata.json
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc       100 Apr  5 01:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 01:24:27] -rwxr-xr-x. 1 boinc boinc      7986 Apr  5 01:01 run_atlas
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc       105 Apr  5 01:01 job.xml
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc      6710 Apr  5 01:01 init_data.xml
[2026-04-05 01:24:27] -rw-r--r--. 2 boinc boinc 212920825 Apr  5 01:01 EVNT.48967100._000079.pool.root.1
[2026-04-05 01:24:27] -rw-r--r--. 2 boinc boinc     15845 Apr  5 01:01 start_atlas.sh
[2026-04-05 01:24:27] drwxrwx--x. 2 boinc boinc      4096 Apr  5 01:01 shared
[2026-04-05 01:24:27] -rw-r--r--. 2 boinc boinc    597536 Apr  5 01:01 input.tar.gz
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc         0 Apr  5 01:01 boinc_lockfile
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc      2578 Apr  5 01:01 pandaJob.out
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc   1005080 Apr  5 01:01 agis_schedconf.cvmfs.json
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc   1511579 Apr  5 01:01 agis_ddmendpoints.agis.ALL.json
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc       441 Apr  5 01:01 workernode_map.json
[2026-04-05 01:24:27] drwx------. 5 boinc boinc      4096 Apr  5 01:01 pilot3
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc 201365736 Apr  5 01:23 HITS.48967102._005316.pool.root.1
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc       529 Apr  5 01:23 boinc_task_state.xml
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc        95 Apr  5 01:23 pilot_heartbeat.json
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc      1038 Apr  5 01:23 memory_monitor_summary.json
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc    346268 Apr  5 01:23 log.48967102._005316.job.log.tgz.1
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc      6349 Apr  5 01:23 heartbeat.json
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc      8192 Apr  5 01:24 boinc_mmap_file
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc        27 Apr  5 01:24 wrapper_checkpoint.txt
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc      4941 Apr  5 01:24 pilotlog.txt
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc    237370 Apr  5 01:24 log.48967102._005316.job.log.1
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc       357 Apr  5 01:24 output.list
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc       620 Apr  5 01:24 runtime_log
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc    604160 Apr  5 01:24 result.tar.gz
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc      9223 Apr  5 01:24 runtime_log.err
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc       659 Apr  5 01:24 lH0LDmQKpQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmuoIKDmZiFTIo.diag
[2026-04-05 01:24:27] -rw-r--r--. 1 boinc boinc     18368 Apr  5 01:24 stderr.txt
[2026-04-05 01:24:27] HITS file was successfully produced:
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc 201365736 Apr  5 01:23 shared/HITS.pool.root.1
[2026-04-05 01:24:27]  *** Contents of shared directory: ***
[2026-04-05 01:24:27] total 405780
[2026-04-05 01:24:27] -rw-r--r--. 2 boinc boinc 212920825 Apr  5 01:01 ATLAS.root_0
[2026-04-05 01:24:27] -rw-r--r--. 2 boinc boinc     15845 Apr  5 01:01 start_atlas.sh
[2026-04-05 01:24:27] -rw-r--r--. 2 boinc boinc    597536 Apr  5 01:01 input.tar.gz
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc 201365736 Apr  5 01:23 HITS.pool.root.1
[2026-04-05 01:24:27] -rw-------. 1 boinc boinc    604160 Apr  5 01:24 result.tar.gz
01:24:28 (4069989): run_atlas exited; CPU time 13944.621026
01:24:28 (4069989): called boinc_finish(0)

</stderr_txt>
]]>

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