Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:59:17 (22526): wrapper (7.7.26015): starting
01:59:17 (22526): wrapper: running run_atlas (--nthreads 8)
[2026-03-30 01:59:17] Arguments: --nthreads 8
[2026-03-30 01:59:17] Threads: 8
[2026-03-30 01:59:17] Checking for CVMFS
[2026-03-30 01:59:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-30 01:59:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-30 01:59:23] Running cvmfs_config stat atlas.cern.ch
[2026-03-30 01:59:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-30 01:59:24] 2.11.2.0 21086 149864 137312 157860 1 53 24077139 25165825 4838 130560 159 44643435 99.849 28927056 962 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-30 01:59:24] CVMFS is ok
[2026-03-30 01:59:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-30 01:59:24] Checking for apptainer binary...
[2026-03-30 01:59:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-30 01:59:24] Running /usr/bin/apptainer --version
[2026-03-30 01:59:24] apptainer version 1.3.2-1.el7
[2026-03-30 01:59:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-30 01:59:47] cg-vwn408.simple-grid.lan
[2026-03-30 01:59:47] apptainer works
[2026-03-30 01:59:47] Set ATHENA_PROC_NUMBER=8
[2026-03-30 01:59:47] Set ATHENA_CORE_NUMBER=8
[2026-03-30 01:59:47] Starting ATLAS job with PandaID=7069719784
[2026-03-30 01:59:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-30 07:09:43]  *** The last 200 lines of the pilot log: ***
[2026-03-30 07:09:43] 2026-03-30 05:08:32,962 | INFO     | log transfer has been attempted: DONE
[2026-03-30 07:09:43] 2026-03-30 05:08:32,962 | INFO     | job 7069719784 has finished - writing final server update
[2026-03-30 07:09:43] 2026-03-30 05:08:32,963 | INFO     | total number of processed events: 400 (read)
[2026-03-30 07:09:43] 2026-03-30 05:08:32,965 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7069719784/memory_monitor_summary.json (trf name=prmon)
[2026-03-30 07:09:43] 2026-03-30 05:08:32,965 | INFO     | extracted standard info from prmon json
[2026-03-30 07:09:43] 2026-03-30 05:08:32,965 | INFO     | extracted standard memory fields from prmon json
[2026-03-30 07:09:43] 2026-03-30 05:08:32,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-30 07:09:43] 2026-03-30 05:08:32,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-30 07:09:43] 2026-03-30 05:08:32,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-30 07:09:43] 2026-03-30 05:08:32,972 | INFO     | fitting pss+swap vs Time
[2026-03-30 07:09:43] 2026-03-30 05:08:32,973 | INFO     | sum of square deviations: 7879803557.5
[2026-03-30 07:09:43] 2026-03-30 05:08:32,976 | INFO     | sum of deviations: 108534021066.99998
[2026-03-30 07:09:43] 2026-03-30 05:08:32,976 | INFO     | mean x: 1774838338.5
[2026-03-30 07:09:43] 2026-03-30 05:08:32,976 | INFO     | mean y: 2454500.4013605444
[2026-03-30 07:09:43] 2026-03-30 05:08:32,976 | INFO     | intersect: -24443629747.210705
[2026-03-30 07:09:43] 2026-03-30 05:08:32,977 | INFO     | chi2: 5.544038840714825
[2026-03-30 07:09:43] 2026-03-30 05:08:32,977 | INFO     | sum of square deviations: 7484568240.0
[2026-03-30 07:09:43] 2026-03-30 05:08:32,983 | INFO     | sum of deviations: 125941039017.0
[2026-03-30 07:09:43] 2026-03-30 05:08:32,983 | INFO     | mean x: 1774838186.0
[2026-03-30 07:09:43] 2026-03-30 05:08:32,984 | INFO     | mean y: 2461113.2560553635
[2026-03-30 07:09:43] 2026-03-30 05:08:32,984 | INFO     | intersect: -29862316394.85676
[2026-03-30 07:09:43] 2026-03-30 05:08:32,984 | INFO     | chi2: 4.80253519676101
[2026-03-30 07:09:43] 2026-03-30 05:08:32,984 | INFO     | current chi2=4.80253519676101 (change=13.374791650236869 %)
[2026-03-30 07:09:43] 2026-03-30 05:08:32,984 | INFO     | right removable region: 288
[2026-03-30 07:09:43] 2026-03-30 05:08:32,985 | INFO     | sum of square deviations: 7484568240.0
[2026-03-30 07:09:43] 2026-03-30 05:08:32,988 | INFO     | sum of deviations: 11874258047.999996
[2026-03-30 07:09:43] 2026-03-30 05:08:32,988 | INFO     | mean x: 1774838491.0
[2026-03-30 07:09:43] 2026-03-30 05:08:32,988 | INFO     | mean y: 2491756.9688581317
[2026-03-30 07:09:43] 2026-03-30 05:08:32,988 | INFO     | intersect: -2813287264.595239
[2026-03-30 07:09:43] 2026-03-30 05:08:32,989 | INFO     | chi2: 1.4098836425452066
[2026-03-30 07:09:43] 2026-03-30 05:08:32,989 | INFO     | current chi2=1.4098836425452066 (change=74.56937653121814 %)
[2026-03-30 07:09:43] 2026-03-30 05:08:32,990 | INFO     | sum of square deviations: 7102775035.0
[2026-03-30 07:09:43] 2026-03-30 05:08:32,992 | INFO     | sum of deviations: -20335320174.5
[2026-03-30 07:09:43] 2026-03-30 05:08:32,993 | INFO     | mean x: 1774838643.5
[2026-03-30 07:09:43] 2026-03-30 05:08:32,993 | INFO     | mean y: 2504564.51056338
[2026-03-30 07:09:43] 2026-03-30 05:08:32,993 | INFO     | intersect: 5083886404.115422
[2026-03-30 07:09:43] 2026-03-30 05:08:32,993 | INFO     | chi2: 0.8338612966041461
[2026-03-30 07:09:43] 2026-03-30 05:08:32,993 | INFO     | current chi2=0.8338612966041461 (change=40.85602021037639 %)
[2026-03-30 07:09:43] 2026-03-30 05:08:32,994 | INFO     | sum of square deviations: 6734191380.0
[2026-03-30 07:09:43] 2026-03-30 05:08:32,997 | INFO     | sum of deviations: -26443711365.0
[2026-03-30 07:09:43] 2026-03-30 05:08:32,997 | INFO     | mean x: 1774838796.0
[2026-03-30 07:09:43] 2026-03-30 05:08:32,997 | INFO     | mean y: 2507069.383512545
[2026-03-30 07:09:43] 2026-03-30 05:08:32,997 | INFO     | intersect: 6971914707.576907
[2026-03-30 07:09:43] 2026-03-30 05:08:32,998 | INFO     | chi2: 0.7988180256150375
[2026-03-30 07:09:43] 2026-03-30 05:08:32,998 | INFO     | current chi2=0.7988180256150375 (change=4.202529980923737 %)
[2026-03-30 07:09:43] 2026-03-30 05:08:32,998 | INFO     | left removable region: 30
[2026-03-30 07:09:43] 2026-03-30 05:08:32,998 | INFO     | sum of square deviations: 5325139844.5
[2026-03-30 07:09:43] 2026-03-30 05:08:33,001 | INFO     | sum of deviations: -6319814201.500001
[2026-03-30 07:09:43] 2026-03-30 05:08:33,001 | INFO     | mean x: 1774839070.5
[2026-03-30 07:09:43] 2026-03-30 05:08:33,001 | INFO     | mean y: 2514358.7093023257
[2026-03-30 07:09:43] 2026-03-30 05:08:33,001 | INFO     | intersect: 2108872781.3351295
[2026-03-30 07:09:43] 2026-03-30 05:08:33,002 | INFO     | chi2: 0.011797373752307837
[2026-03-30 07:09:43] 2026-03-30 05:08:33,002 | INFO     | current memory leak: -1.19 B/s (using 258 data points, chi2=0.01)
[2026-03-30 07:09:43] 2026-03-30 05:08:33,003 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-30 07:09:43] 2026-03-30 05:08:33,003 | INFO     | ..............................
[2026-03-30 07:09:43] 2026-03-30 05:08:33,003 | INFO     | . Timing measurements:
[2026-03-30 07:09:43] 2026-03-30 05:08:33,003 | INFO     | . get job = 0 s
[2026-03-30 07:09:43] 2026-03-30 05:08:33,003 | INFO     | . initial setup = 103 s
[2026-03-30 07:09:43] 2026-03-30 05:08:33,003 | INFO     | . payload setup = 177 s
[2026-03-30 07:09:43] 2026-03-30 05:08:33,003 | INFO     | . stage-in = 0 s
[2026-03-30 07:09:43] 2026-03-30 05:08:33,003 | INFO     | . payload execution = 18007 s
[2026-03-30 07:09:43] 2026-03-30 05:08:33,003 | INFO     | . stage-out = 4 s
[2026-03-30 07:09:43] 2026-03-30 05:08:33,003 | INFO     | . log creation = 0 s
[2026-03-30 07:09:43] 2026-03-30 05:08:33,004 | INFO     | ..............................
[2026-03-30 07:09:43] 2026-03-30 05:08:33,523 | INFO     | 
[2026-03-30 07:09:43] 2026-03-30 05:08:33,523 | INFO     | job summary report
[2026-03-30 07:09:43] 2026-03-30 05:08:33,524 | INFO     | --------------------------------------------------
[2026-03-30 07:09:43] 2026-03-30 05:08:33,524 | INFO     | PanDA job id: 7069719784
[2026-03-30 07:09:43] 2026-03-30 05:08:33,524 | INFO     | task id: 48967102
[2026-03-30 07:09:43] 2026-03-30 05:08:33,524 | INFO     | errors: (none)
[2026-03-30 07:09:43] 2026-03-30 05:08:33,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-30 07:09:43] 2026-03-30 05:08:33,524 | INFO     | pilot state: finished 
[2026-03-30 07:09:43] 2026-03-30 05:08:33,524 | INFO     | transexitcode: 0
[2026-03-30 07:09:43] 2026-03-30 05:08:33,524 | INFO     | exeerrorcode: 0
[2026-03-30 07:09:43] 2026-03-30 05:08:33,524 | INFO     | exeerrordiag: 
[2026-03-30 07:09:43] 2026-03-30 05:08:33,525 | INFO     | exitcode: 0
[2026-03-30 07:09:43] 2026-03-30 05:08:33,525 | INFO     | exitmsg: OK
[2026-03-30 07:09:43] 2026-03-30 05:08:33,525 | INFO     | cpuconsumptiontime: 70154 s
[2026-03-30 07:09:43] 2026-03-30 05:08:33,525 | INFO     | nevents: 400
[2026-03-30 07:09:43] 2026-03-30 05:08:33,525 | INFO     | neventsw: 0
[2026-03-30 07:09:43] 2026-03-30 05:08:33,525 | INFO     | pid: 31187
[2026-03-30 07:09:43] 2026-03-30 05:08:33,525 | INFO     | pgrp: 31187
[2026-03-30 07:09:43] 2026-03-30 05:08:33,525 | INFO     | corecount: 8
[2026-03-30 07:09:43] 2026-03-30 05:08:33,525 | INFO     | event service: False
[2026-03-30 07:09:43] 2026-03-30 05:08:33,525 | INFO     | sizes: {0: 2279114, 1: 2279799, 2: 2280260, 12: 2280260, 18189: 2312491, 18190: 2312490, 18196: 2321672, 18198: 2321728, 18199: 2321922}
[2026-03-30 07:09:43] 2026-03-30 05:08:33,526 | INFO     | --------------------------------------------------
[2026-03-30 07:09:43] 2026-03-30 05:08:33,526 | INFO     | 
[2026-03-30 07:09:43] 2026-03-30 05:08:33,526 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-30 07:09:43] 2026-03-30 05:08:34,077 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,077 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,077 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,077 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,079 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-30 07:09:43] 2026-03-30 05:08:34,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,079 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-30 07:09:43] 2026-03-30 05:08:34,079 | INFO     | job 7069719784 has completed (purged errors)
[2026-03-30 07:09:43] 2026-03-30 05:08:34,079 | INFO     | overall cleanup function is called
[2026-03-30 07:09:43] 2026-03-30 05:08:35,088 | INFO     | --- collectZombieJob: --- 10, [31187]
[2026-03-30 07:09:43] 2026-03-30 05:08:35,088 | INFO     | zombie collector waiting for pid 31187
[2026-03-30 07:09:43] 2026-03-30 05:08:35,089 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-30 07:09:43] 2026-03-30 05:08:35,089 | INFO     | collected zombie processes
[2026-03-30 07:09:43] 2026-03-30 05:08:35,089 | INFO     | will attempt to kill all subprocesses of pid=31187
[2026-03-30 07:09:43] 2026-03-30 05:08:35,243 | INFO     | process IDs to be killed: [31187] (in reverse order)
[2026-03-30 07:09:43] 2026-03-30 05:08:35,946 | WARNING  | found no corresponding commands to process id(s)
[2026-03-30 07:09:43] 2026-03-30 05:08:35,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-30 07:09:43] 2026-03-30 05:08:35,950 | INFO     | did not find any defunct processes belonging to 31187
[2026-03-30 07:09:43] 2026-03-30 05:08:35,953 | INFO     | did not find any defunct processes belonging to 31187
[2026-03-30 07:09:43] 2026-03-30 05:08:35,953 | INFO     | ready for new job
[2026-03-30 07:09:43] 2026-03-30 05:08:35,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-30 07:09:43] 2026-03-30 05:08:35,961 | INFO     | **************************************
[2026-03-30 07:09:43] 2026-03-30 05:08:35,962 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-30 07:09:43] 2026-03-30 05:08:35,962 | INFO     | **************************************
[2026-03-30 07:09:43] 2026-03-30 05:08:35,962 | INFO     | 
[2026-03-30 07:09:43] 2026-03-30 05:08:35,962 | INFO     | pilot is running in a VM
[2026-03-30 07:09:43] 2026-03-30 05:08:35,963 | INFO     | architecture information:
[2026-03-30 07:09:43] 2026-03-30 05:08:35,969 | INFO     | executing command: cat /etc/os-release
[2026-03-30 07:09:43] 2026-03-30 05:08:36,246 | INFO     | cat /etc/os-release:
[2026-03-30 07:09:43] NAME="CentOS Linux"
[2026-03-30 07:09:43] VERSION="7 (Core)"
[2026-03-30 07:09:43] ID="centos"
[2026-03-30 07:09:43] ID_LIKE="rhel fedora"
[2026-03-30 07:09:43] VERSION_ID="7"
[2026-03-30 07:09:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-30 07:09:43] ANSI_COLOR="0;31"
[2026-03-30 07:09:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-30 07:09:43] HOME_URL="https://www.centos.org/"
[2026-03-30 07:09:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-30 07:09:43] 
[2026-03-30 07:09:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-30 07:09:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-30 07:09:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-30 07:09:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-30 07:09:43] 
[2026-03-30 07:09:43] 2026-03-30 05:08:36,246 | INFO     | **************************************
[2026-03-30 07:09:43] 2026-03-30 05:08:36,749 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-30 07:09:43] 2026-03-30 05:08:37,018 | INFO     | sufficient remaining disk space (496909680640 B)
[2026-03-30 07:09:43] 2026-03-30 05:08:37,018 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-30 07:09:43] 2026-03-30 05:08:37,019 | INFO     | current server update state: UPDATING_FINAL
[2026-03-30 07:09:43] 2026-03-30 05:08:37,019 | INFO     | update_server=False
[2026-03-30 07:09:43] 2026-03-30 05:08:37,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-30 07:09:43] 2026-03-30 05:08:37,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-30 07:09:43] 2026-03-30 05:08:37,020 | INFO     | aborting loop
[2026-03-30 07:09:43] 2026-03-30 05:08:37,100 | INFO     | all payload control threads have been joined
[2026-03-30 07:09:43] 2026-03-30 05:08:37,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-30 07:09:43] 2026-03-30 05:08:37,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-30 07:09:43] 2026-03-30 05:08:38,025 | INFO     | [job] retrieve thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:38,026 | INFO     | [job] job monitor thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:38,106 | INFO     | [payload] control thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:38,116 | INFO     | all data control threads have been joined
[2026-03-30 07:09:43] 2026-03-30 05:08:38,132 | INFO     | [payload] failed_post thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:38,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-30 07:09:43] 2026-03-30 05:08:38,256 | INFO     | [data] copytool_in thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:38,393 | INFO     | all job control threads have been joined
[2026-03-30 07:09:43] 2026-03-30 05:08:38,544 | INFO     | [payload] validate_pre thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:38,651 | INFO     | [job] validate thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:38,990 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:39,122 | INFO     | [data] control thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:39,163 | INFO     | [payload] validate_post thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:39,168 | INFO     | [job] queue monitor thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:39,212 | INFO     | [payload] execute_payloads thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:39,355 | INFO     | [job] create_data_payload thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:39,399 | INFO     | [job] control thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:39,493 | INFO     | [data] copytool_out thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:08:41,736 | INFO     | [data] queue_monitor thread has finished
[2026-03-30 07:09:43] 2026-03-30 05:09:05,735 | INFO     | PID=26666 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-30 07:09:43] 2026-03-30 05:09:05,735 | INFO     | .. there are 9 such processes running
[2026-03-30 07:09:43] 2026-03-30 05:09:05,735 | INFO     | found 0 job(s) in 20 queues
[2026-03-30 07:09:43] 2026-03-30 05:09:05,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-30 07:09:43] 2026-03-30 05:09:05,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-30 07:09:43] 2026-03-30 05:09:32,521 | INFO     | [monitor] cgroup control has ended
[2026-03-30 07:09:43] 2026-03-30 05:09:34,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139681361020736)>', '<ExcThread(monitor, started 139680783787776)>']
[2026-03-30 07:09:43] 2026-03-30 05:09:34,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-30 07:09:43] 2026-03-30 05:09:34,907 | INFO     | [monitor] control thread has ended
[2026-03-30 07:09:43] 2026-03-30 05:09:39,103 | INFO     | all workflow threads have been joined
[2026-03-30 07:09:43] 2026-03-30 05:09:39,103 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-30 07:09:43] 2026-03-30 05:09:39,104 | INFO     | traces error code: 0
[2026-03-30 07:09:43] 2026-03-30 05:09:39,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-30 07:09:43] 2026-03-30 05:09:39,584 [wrapper] ==== pilot stdout END ====
[2026-03-30 07:09:43] 2026-03-30 05:09:39,622 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-30 07:09:43] 2026-03-30 05:09:39,679 [wrapper] pilotpid: 26666
[2026-03-30 07:09:43] 2026-03-30 05:09:39,751 [wrapper] Pilot exit status: 0
[2026-03-30 07:09:43] 2026-03-30 05:09:40,205 [wrapper] pandaids: 7069719784
[2026-03-30 07:09:43] 2026-03-30 05:09:40,780 [wrapper] cleanup supervisor_pilot  7779 26667
[2026-03-30 07:09:43] 2026-03-30 05:09:40,822 [wrapper] Test setup, not cleaning
[2026-03-30 07:09:43] 2026-03-30 05:09:40,913 [wrapper] apfmon messages muted
[2026-03-30 07:09:43] 2026-03-30 05:09:41,020 [wrapper] ==== wrapper stdout END ====
[2026-03-30 07:09:43] 2026-03-30 05:09:41,112 [wrapper] ==== wrapper stderr END ====
[2026-03-30 07:09:43]  *** Error codes and diagnostics ***
[2026-03-30 07:09:43]     "exeErrorCode": 0,
[2026-03-30 07:09:43]     "exeErrorDiag": "",
[2026-03-30 07:09:43]     "pilotErrorCode": 0,
[2026-03-30 07:09:43]     "pilotErrorDiag": "",
[2026-03-30 07:09:43]  *** Listing of results directory ***
[2026-03-30 07:09:43] total 420692
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc    585013 Mar 28 21:17 pilot3.tar.gz
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc      5118 Mar 28 21:18 queuedata.json
[2026-03-30 07:09:43] -rwx------. 1 boinc boinc     36322 Mar 28 21:18 runpilot2-wrapper.sh
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc       100 Mar 30 01:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-30 07:09:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 30 01:59 run_atlas
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc       105 Mar 30 01:59 job.xml
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc      6391 Mar 30 01:59 init_data.xml
[2026-03-30 07:09:43] -rw-r--r--. 2 boinc boinc 217515767 Mar 30 01:59 EVNT.48967100._000101.pool.root.1
[2026-03-30 07:09:43] -rw-r--r--. 2 boinc boinc     15845 Mar 30 01:59 start_atlas.sh
[2026-03-30 07:09:43] drwxrwx--x. 2 boinc boinc        68 Mar 30 01:59 shared
[2026-03-30 07:09:43] -rw-r--r--. 2 boinc boinc    597539 Mar 30 01:59 input.tar.gz
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc         0 Mar 30 01:59 boinc_lockfile
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc      2578 Mar 30 01:59 pandaJob.out
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc       415 Mar 30 02:04 workernode_map.json
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc   1004063 Mar 30 02:05 agis_schedconf.cvmfs.json
[2026-03-30 07:09:43] drwx------. 5 boinc boinc      4096 Mar 30 02:05 pilot3
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc 203261634 Mar 30 07:06 HITS.48967102._005686.pool.root.1
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc       531 Mar 30 07:07 boinc_task_state.xml
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc        95 Mar 30 07:08 pilot_heartbeat.json
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc      1012 Mar 30 07:08 memory_monitor_summary.json
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc   1511579 Mar 30 07:08 agis_ddmendpoints.agis.ALL.json
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc    517297 Mar 30 07:08 log.48967102._005686.job.log.tgz.1
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc      6313 Mar 30 07:08 heartbeat.json
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc      8192 Mar 30 07:09 boinc_mmap_file
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc        28 Mar 30 07:09 wrapper_checkpoint.txt
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc      4880 Mar 30 07:09 pilotlog.txt
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc   2525170 Mar 30 07:09 log.48967102._005686.job.log.1
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc       357 Mar 30 07:09 output.list
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc       620 Mar 30 07:09 runtime_log
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc   3061760 Mar 30 07:09 result.tar.gz
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc      8816 Mar 30 07:09 runtime_log.err
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc       656 Mar 30 07:09 bBcMDmXIpQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmcCLKDmD80sym.diag
[2026-03-30 07:09:43] -rw-r--r--. 1 boinc boinc     20722 Mar 30 07:09 stderr.txt
[2026-03-30 07:09:43] HITS file was successfully produced:
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc 203261634 Mar 30 07:06 shared/HITS.pool.root.1
[2026-03-30 07:09:43]  *** Contents of shared directory: ***
[2026-03-30 07:09:43] total 414512
[2026-03-30 07:09:43] -rw-r--r--. 2 boinc boinc 217515767 Mar 30 01:59 ATLAS.root_0
[2026-03-30 07:09:43] -rw-r--r--. 2 boinc boinc     15845 Mar 30 01:59 start_atlas.sh
[2026-03-30 07:09:43] -rw-r--r--. 2 boinc boinc    597539 Mar 30 01:59 input.tar.gz
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc 203261634 Mar 30 07:06 HITS.pool.root.1
[2026-03-30 07:09:43] -rw-------. 1 boinc boinc   3061760 Mar 30 07:09 result.tar.gz
07:09:45 (22526): run_atlas exited; CPU time 70449.943381
07:09:45 (22526): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN