Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:02:33 (940824): wrapper (7.7.26015): starting
18:02:33 (940824): wrapper: running run_atlas (--nthreads 12)
[2026-04-04 18:02:33] Arguments: --nthreads 12
[2026-04-04 18:02:33] Threads: 12
[2026-04-04 18:02:33] Checking for CVMFS
[2026-04-04 18:02:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-04 18:02:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-04 18:02:34] Running cvmfs_config stat atlas.cern.ch
[2026-04-04 18:02:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-04 18:02:35] 2.13.3.0 3021178 15089 69312 158084 0 190 3885048 4096000 24062 130560 0 69453521 99.985 939485 2239 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-04-04 18:02:35] CVMFS is ok
[2026-04-04 18:02:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 18:02:35] Checking for apptainer binary...
[2026-04-04 18:02:35] apptainer is not installed, using version from CVMFS
[2026-04-04 18:02:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 18:02:37] epyc7v12
[2026-04-04 18:02:37] apptainer works
[2026-04-04 18:02:37] Set ATHENA_PROC_NUMBER=12
[2026-04-04 18:02:37] Set ATHENA_CORE_NUMBER=12
[2026-04-04 18:02:37] Starting ATLAS job with PandaID=7069740447
[2026-04-04 18:02:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 21:46:01]  *** The last 200 lines of the pilot log: ***
[2026-04-04 21:46:01] 2026-04-04 21:45:15,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,501 | INFO     | job 7069740447 has state=finished
[2026-04-04 21:46:01] 2026-04-04 21:45:16,502 | INFO     | preparing for final server update for job 7069740447 in state='finished'
[2026-04-04 21:46:01] 2026-04-04 21:45:16,502 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31427/slots/2/PanDA_Pilot-7069740447/jobReport.json
[2026-04-04 21:46:01] 2026-04-04 21:45:16,505 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31427/slots/2/workernode_map.json
[2026-04-04 21:46:01] 2026-04-04 21:45:16,506 | INFO     | this job has now completed (state=finished)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,506 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,509 | INFO     | log transfer has been attempted: DONE
[2026-04-04 21:46:01] 2026-04-04 21:45:16,509 | INFO     | job 7069740447 has finished - writing final server update
[2026-04-04 21:46:01] 2026-04-04 21:45:16,509 | INFO     | total number of processed events: 400 (read)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,556 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/2/PanDA_Pilot-7069740447/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,557 | INFO     | extracted standard info from prmon json
[2026-04-04 21:46:01] 2026-04-04 21:45:16,557 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 21:46:01] 2026-04-04 21:45:16,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-04 21:46:01] 2026-04-04 21:45:16,558 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 21:46:01] 2026-04-04 21:45:16,558 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 21:46:01] 2026-04-04 21:45:16,562 | INFO     | fitting pss+swap vs Time
[2026-04-04 21:46:01] 2026-04-04 21:45:16,563 | INFO     | sum of square deviations: 3212467674.5
[2026-04-04 21:46:01] 2026-04-04 21:45:16,565 | INFO     | sum of deviations: 77194091937.00005
[2026-04-04 21:46:01] 2026-04-04 21:45:16,565 | INFO     | mean x: 1775332479.5
[2026-04-04 21:46:01] 2026-04-04 21:45:16,565 | INFO     | mean y: 2590335.3211009176
[2026-04-04 21:46:01] 2026-04-04 21:45:16,565 | INFO     | intersect: -42657816718.4543
[2026-04-04 21:46:01] 2026-04-04 21:45:16,566 | INFO     | chi2: 3.4516487364503083
[2026-04-04 21:46:01] 2026-04-04 21:45:16,577 | INFO     | sum of square deviations: 2996454322.0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,579 | INFO     | sum of deviations: 90863517215.99998
[2026-04-04 21:46:01] 2026-04-04 21:45:16,579 | INFO     | mean x: 1775332327.0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,579 | INFO     | mean y: 2599776.20657277
[2026-04-04 21:46:01] 2026-04-04 21:45:16,579 | INFO     | intersect: -53832006769.97852
[2026-04-04 21:46:01] 2026-04-04 21:45:16,580 | INFO     | chi2: 2.6269335874819086
[2026-04-04 21:46:01] 2026-04-04 21:45:16,580 | INFO     | current chi2=2.6269335874819086 (change=23.89336841432308 %)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,584 | INFO     | right removable region: 212
[2026-04-04 21:46:01] 2026-04-04 21:45:16,584 | INFO     | sum of square deviations: 2996454322.0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,588 | INFO     | sum of deviations: 23080326244.0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,588 | INFO     | mean x: 1775332632.0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,588 | INFO     | mean y: 2628352.9483568077
[2026-04-04 21:46:01] 2026-04-04 21:45:16,588 | INFO     | intersect: -13671952313.053598
[2026-04-04 21:46:01] 2026-04-04 21:45:16,589 | INFO     | chi2: 1.1485346070385773
[2026-04-04 21:46:01] 2026-04-04 21:45:16,589 | INFO     | current chi2=1.1485346070385773 (change=66.72504374765157 %)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,589 | INFO     | sum of square deviations: 2790348132.0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,596 | INFO     | sum of deviations: 3104198835.5
[2026-04-04 21:46:01] 2026-04-04 21:45:16,596 | INFO     | mean x: 1775332784.5
[2026-04-04 21:46:01] 2026-04-04 21:45:16,596 | INFO     | mean y: 2643102.1201923075
[2026-04-04 21:46:01] 2026-04-04 21:45:16,596 | INFO     | intersect: -1972374243.9483206
[2026-04-04 21:46:01] 2026-04-04 21:45:16,597 | INFO     | chi2: 0.8929139248488666
[2026-04-04 21:46:01] 2026-04-04 21:45:16,597 | INFO     | current chi2=0.8929139248488666 (change=22.256245534369427 %)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,597 | INFO     | left removable region: 20
[2026-04-04 21:46:01] 2026-04-04 21:45:16,597 | INFO     | sum of square deviations: 2194675568.0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,604 | INFO     | sum of deviations: 9747416035.499998
[2026-04-04 21:46:01] 2026-04-04 21:45:16,605 | INFO     | mean x: 1775332906.5
[2026-04-04 21:46:01] 2026-04-04 21:45:16,605 | INFO     | mean y: 2660752.7760416665
[2026-04-04 21:46:01] 2026-04-04 21:45:16,610 | INFO     | intersect: -7882289849.2570505
[2026-04-04 21:46:01] 2026-04-04 21:45:16,611 | INFO     | chi2: 0.0006923125890891305
[2026-04-04 21:46:01] 2026-04-04 21:45:16,611 | INFO     | current memory leak: 4.44 B/s (using 192 data points, chi2=0.00)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,611 | INFO     | could have reported an average CPU frequency of 2385 MHz (11 samples)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,612 | INFO     | ..............................
[2026-04-04 21:46:01] 2026-04-04 21:45:16,612 | INFO     | . Timing measurements:
[2026-04-04 21:46:01] 2026-04-04 21:45:16,612 | INFO     | . get job = 0 s
[2026-04-04 21:46:01] 2026-04-04 21:45:16,612 | INFO     | . initial setup = 19 s
[2026-04-04 21:46:01] 2026-04-04 21:45:16,612 | INFO     | . payload setup = 31 s
[2026-04-04 21:46:01] 2026-04-04 21:45:16,612 | INFO     | . stage-in = 0 s
[2026-04-04 21:46:01] 2026-04-04 21:45:16,612 | INFO     | . payload execution = 13260 s
[2026-04-04 21:46:01] 2026-04-04 21:45:16,612 | INFO     | . stage-out = 2 s
[2026-04-04 21:46:01] 2026-04-04 21:45:16,612 | INFO     | . log creation = 0 s
[2026-04-04 21:46:01] 2026-04-04 21:45:16,612 | INFO     | ..............................
[2026-04-04 21:46:01] 2026-04-04 21:45:16,954 | INFO     | 
[2026-04-04 21:46:01] 2026-04-04 21:45:16,954 | INFO     | job summary report
[2026-04-04 21:46:01] 2026-04-04 21:45:16,954 | INFO     | --------------------------------------------------
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | PanDA job id: 7069740447
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | task id: 48967094
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | errors: (none)
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | pilot state: finished 
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | transexitcode: 0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | exeerrorcode: 0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | exeerrordiag: 
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | exitcode: 0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | exitmsg: OK
[2026-04-04 21:46:01] 2026-04-04 21:45:16,955 | INFO     | cpuconsumptiontime: 58608 s
[2026-04-04 21:46:01] 2026-04-04 21:45:16,956 | INFO     | nevents: 400
[2026-04-04 21:46:01] 2026-04-04 21:45:16,956 | INFO     | neventsw: 0
[2026-04-04 21:46:01] 2026-04-04 21:45:16,956 | INFO     | pid: 950820
[2026-04-04 21:46:01] 2026-04-04 21:45:16,956 | INFO     | pgrp: 950820
[2026-04-04 21:46:01] 2026-04-04 21:45:16,956 | INFO     | corecount: 12
[2026-04-04 21:46:01] 2026-04-04 21:45:16,956 | INFO     | event service: False
[2026-04-04 21:46:01] 2026-04-04 21:45:16,956 | INFO     | sizes: {0: 2279140, 1: 2279848, 2: 2280309, 13296: 2310579, 13299: 2319623, 13301: 2319679, 13303: 2320001}
[2026-04-04 21:46:01] 2026-04-04 21:45:16,956 | INFO     | --------------------------------------------------
[2026-04-04 21:46:01] 2026-04-04 21:45:16,956 | INFO     | 
[2026-04-04 21:46:01] 2026-04-04 21:45:16,956 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/2
[2026-04-04 21:46:01] 2026-04-04 21:45:17,035 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,036 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,036 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,037 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,040 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 21:46:01] 2026-04-04 21:45:17,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,041 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 21:46:01] 2026-04-04 21:45:17,041 | INFO     | job 7069740447 has completed (purged errors)
[2026-04-04 21:46:01] 2026-04-04 21:45:17,041 | INFO     | overall cleanup function is called
[2026-04-04 21:46:01] 2026-04-04 21:45:18,057 | INFO     | --- collectZombieJob: --- 10, [950820]
[2026-04-04 21:46:01] 2026-04-04 21:45:18,057 | INFO     | zombie collector waiting for pid 950820
[2026-04-04 21:46:01] 2026-04-04 21:45:18,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 21:46:01] 2026-04-04 21:45:18,058 | INFO     | collected zombie processes
[2026-04-04 21:46:01] 2026-04-04 21:45:18,058 | INFO     | will attempt to kill all subprocesses of pid=950820
[2026-04-04 21:46:01] 2026-04-04 21:45:19,796 | INFO     | process IDs to be killed: [950820] (in reverse order)
[2026-04-04 21:46:01] 2026-04-04 21:45:20,465 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 21:46:01] 2026-04-04 21:45:20,466 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 21:46:01] 2026-04-04 21:45:20,504 | INFO     | did not find any defunct processes belonging to 950820
[2026-04-04 21:46:01] 2026-04-04 21:45:20,542 | INFO     | did not find any defunct processes belonging to 950820
[2026-04-04 21:46:01] 2026-04-04 21:45:20,542 | INFO     | ready for new job
[2026-04-04 21:46:01] 2026-04-04 21:45:20,543 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 21:46:01] 2026-04-04 21:45:20,549 | INFO     | **************************************
[2026-04-04 21:46:01] 2026-04-04 21:45:20,549 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 21:46:01] 2026-04-04 21:45:20,549 | INFO     | **************************************
[2026-04-04 21:46:01] 2026-04-04 21:45:20,549 | INFO     | 
[2026-04-04 21:46:01] 2026-04-04 21:45:20,568 | INFO     | architecture information:
[2026-04-04 21:46:01] 2026-04-04 21:45:20,571 | INFO     | executing command: cat /etc/os-release
[2026-04-04 21:46:01] 2026-04-04 21:45:20,626 | INFO     | cat /etc/os-release:
[2026-04-04 21:46:01] NAME="CentOS Linux"
[2026-04-04 21:46:01] VERSION="7 (Core)"
[2026-04-04 21:46:01] ID="centos"
[2026-04-04 21:46:01] ID_LIKE="rhel fedora"
[2026-04-04 21:46:01] VERSION_ID="7"
[2026-04-04 21:46:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 21:46:01] ANSI_COLOR="0;31"
[2026-04-04 21:46:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 21:46:01] HOME_URL="https://www.centos.org/"
[2026-04-04 21:46:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 21:46:01] 
[2026-04-04 21:46:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 21:46:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 21:46:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 21:46:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 21:46:01] 
[2026-04-04 21:46:01] 2026-04-04 21:45:20,627 | INFO     | **************************************
[2026-04-04 21:46:01] 2026-04-04 21:45:21,132 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/2
[2026-04-04 21:46:01] 2026-04-04 21:45:21,206 | INFO     | sufficient remaining disk space (360144961536 B)
[2026-04-04 21:46:01] 2026-04-04 21:45:21,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 21:46:01] 2026-04-04 21:45:21,206 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 21:46:01] 2026-04-04 21:45:21,206 | INFO     | update_server=False
[2026-04-04 21:46:01] 2026-04-04 21:45:21,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 21:46:01] 2026-04-04 21:45:21,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 21:46:01] 2026-04-04 21:45:21,208 | INFO     | aborting loop
[2026-04-04 21:46:01] 2026-04-04 21:45:21,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 21:46:01] 2026-04-04 21:45:21,221 | INFO     | all payload control threads have been joined
[2026-04-04 21:46:01] 2026-04-04 21:45:21,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 21:46:01] 2026-04-04 21:45:21,718 | INFO     | all job control threads have been joined
[2026-04-04 21:46:01] 2026-04-04 21:45:21,861 | INFO     | all data control threads have been joined
[2026-04-04 21:46:01] 2026-04-04 21:45:21,931 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 21:46:01] 2026-04-04 21:45:22,213 | INFO     | [job] job monitor thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:22,214 | INFO     | [job] retrieve thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:22,226 | INFO     | [payload] control thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:22,513 | INFO     | [job] validate thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:22,685 | INFO     | [data] copytool_in thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:22,726 | INFO     | [job] control thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:22,866 | INFO     | [data] control thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:22,936 | INFO     | [job] queue monitor thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:22,948 | INFO     | [payload] validate_post thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:22,987 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:23,348 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:23,434 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:23,534 | INFO     | [data] copytool_out thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:23,782 | INFO     | [payload] failed_post thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:25,214 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:31,807 | INFO     | job.realtimelogging is not enabled
[2026-04-04 21:46:01] 2026-04-04 21:45:32,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 21:46:01] 2026-04-04 21:45:49,554 | INFO     | PID=945081 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-04 21:46:01] 2026-04-04 21:45:49,554 | INFO     | .. there are 27 such processes running
[2026-04-04 21:46:01] 2026-04-04 21:45:49,555 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 21:46:01] 2026-04-04 21:45:49,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 21:46:01] 2026-04-04 21:45:49,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 21:46:01] 2026-04-04 21:45:53,742 | INFO     | [monitor] cgroup control has ended
[2026-04-04 21:46:01] 2026-04-04 21:45:55,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123145612113728)>', '<ExcThread(monitor, started 123144698328832)>']
[2026-04-04 21:46:01] 2026-04-04 21:45:56,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 21:46:01] 2026-04-04 21:45:56,595 | INFO     | [monitor] control thread has ended
[2026-04-04 21:46:01] 2026-04-04 21:46:00,804 | INFO     | all workflow threads have been joined
[2026-04-04 21:46:01] 2026-04-04 21:46:00,804 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 21:46:01] 2026-04-04 21:46:00,805 | INFO     | traces error code: 0
[2026-04-04 21:46:01] 2026-04-04 21:46:00,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 21:46:01] 2026-04-04 21:46:01,177 [wrapper] ==== pilot stdout END ====
[2026-04-04 21:46:01] 2026-04-04 21:46:01,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 21:46:01] 2026-04-04 21:46:01,201 [wrapper] pilotpid: 945081
[2026-04-04 21:46:01] 2026-04-04 21:46:01,210 [wrapper] Pilot exit status: 0
[2026-04-04 21:46:01] 2026-04-04 21:46:01,253 [wrapper] pandaids: 7069740447
[2026-04-04 21:46:01] 2026-04-04 21:46:01,432 [wrapper] cleanup supervisor_pilot 1364216 945082
[2026-04-04 21:46:01] 2026-04-04 21:46:01,441 [wrapper] Test setup, not cleaning
[2026-04-04 21:46:01] 2026-04-04 21:46:01,451 [wrapper] apfmon messages muted
[2026-04-04 21:46:01] 2026-04-04 21:46:01,463 [wrapper] ==== wrapper stdout END ====
[2026-04-04 21:46:01] 2026-04-04 21:46:01,475 [wrapper] ==== wrapper stderr END ====
[2026-04-04 21:46:01]  *** Error codes and diagnostics ***
[2026-04-04 21:46:01]     "exeErrorCode": 0,
[2026-04-04 21:46:01]     "exeErrorDiag": "",
[2026-04-04 21:46:01]     "pilotErrorCode": 0,
[2026-04-04 21:46:01]     "pilotErrorDiag": "",
[2026-04-04 21:46:01]  *** Listing of results directory ***
[2026-04-04 21:46:01] total 422960
[2026-04-04 21:46:01] -rw-r--r-- 1 boinc boinc      5118 Mar 28 20:17 queuedata.json
[2026-04-04 21:46:01] -rw-r--r-- 1 boinc boinc    585013 Mar 28 20:17 pilot3.tar.gz
[2026-04-04 21:46:01] -rwx------ 1 boinc boinc     36322 Mar 28 20:17 runpilot2-wrapper.sh
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc       100 Apr  4 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 21:46:01] -rwxr-xr-x 1 boinc boinc      7986 Apr  4 18:02 run_atlas
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc       105 Apr  4 18:02 job.xml
[2026-04-04 21:46:01] -rw-r--r-- 2 boinc boinc 216042138 Apr  4 18:02 EVNT.48967092._000451.pool.root.1
[2026-04-04 21:46:01] -rw-r--r-- 2 boinc boinc    597549 Apr  4 18:02 input.tar.gz
[2026-04-04 21:46:01] -rw-r--r-- 2 boinc boinc     15845 Apr  4 18:02 start_atlas.sh
[2026-04-04 21:46:01] drwxrwx--x 2 boinc boinc      4096 Apr  4 18:02 shared
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc      6557 Apr  4 18:02 init_data.xml
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc         0 Apr  4 18:02 boinc_setup_complete
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc         0 Apr  4 18:02 boinc_lockfile
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc      2601 Apr  4 18:02 pandaJob.out
[2026-04-04 21:46:01] -rw------- 1 boinc boinc   1005096 Apr  4 18:03 agis_schedconf.cvmfs.json
[2026-04-04 21:46:01] -rw------- 1 boinc boinc       419 Apr  4 18:03 workernode_map.json
[2026-04-04 21:46:01] drwx------ 5 boinc boinc      4096 Apr  4 18:03 pilot3
[2026-04-04 21:46:01] -rw------- 1 boinc boinc 208643670 Apr  4 21:44 HITS.48967094._017902.pool.root.1
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc       530 Apr  4 21:44 boinc_task_state.xml
[2026-04-04 21:46:01] -rw------- 1 boinc boinc      1023 Apr  4 21:45 memory_monitor_summary.json
[2026-04-04 21:46:01] -rw------- 1 boinc boinc   1511579 Apr  4 21:45 agis_ddmendpoints.agis.ALL.json
[2026-04-04 21:46:01] -rw------- 1 boinc boinc    494616 Apr  4 21:45 log.48967094._017902.job.log.tgz.1
[2026-04-04 21:46:01] -rw------- 1 boinc boinc      6276 Apr  4 21:45 heartbeat.json
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc      8192 Apr  4 21:45 boinc_mmap_file
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc        28 Apr  4 21:45 wrapper_checkpoint.txt
[2026-04-04 21:46:01] -rw------- 1 boinc boinc        95 Apr  4 21:45 pilot_heartbeat.json
[2026-04-04 21:46:01] -rw------- 1 boinc boinc      4915 Apr  4 21:46 pilotlog.txt
[2026-04-04 21:46:01] -rw------- 1 boinc boinc   1746891 Apr  4 21:46 log.48967094._017902.job.log.1
[2026-04-04 21:46:01] -rw------- 1 boinc boinc       357 Apr  4 21:46 output.list
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc       620 Apr  4 21:46 runtime_log
[2026-04-04 21:46:01] -rw------- 1 boinc boinc   2263040 Apr  4 21:46 result.tar.gz
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc      9167 Apr  4 21:46 runtime_log.err
[2026-04-04 21:46:01] -rw------- 1 boinc boinc       655 Apr  4 21:46 QxgMDmvGpQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmR8KKDmEY9jQn.diag
[2026-04-04 21:46:01] -rw-rw-r-- 1 boinc boinc     21093 Apr  4 21:46 stderr.txt
[2026-04-04 21:46:01] HITS file was successfully produced:
[2026-04-04 21:46:01] -rw------- 1 boinc boinc 208643670 Apr  4 21:44 shared/HITS.pool.root.1
[2026-04-04 21:46:01]  *** Contents of shared directory: ***
[2026-04-04 21:46:01] total 417556
[2026-04-04 21:46:01] -rw-r--r-- 2 boinc boinc 216042138 Apr  4 18:02 ATLAS.root_0
[2026-04-04 21:46:01] -rw-r--r-- 2 boinc boinc    597549 Apr  4 18:02 input.tar.gz
[2026-04-04 21:46:01] -rw-r--r-- 2 boinc boinc     15845 Apr  4 18:02 start_atlas.sh
[2026-04-04 21:46:01] -rw------- 1 boinc boinc 208643670 Apr  4 21:44 HITS.pool.root.1
[2026-04-04 21:46:01] -rw------- 1 boinc boinc   2263040 Apr  4 21:46 result.tar.gz
21:46:03 (940824): run_atlas exited; CPU time 59476.956491
21:46:03 (940824): called boinc_finish(0)

</stderr_txt>
]]>

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