Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:00:59 (3594319): wrapper (7.7.26015): starting
09:00:59 (3594319): wrapper: running run_atlas (--nthreads 12)
[2026-04-01 09:00:59] Arguments: --nthreads 12
[2026-04-01 09:00:59] Threads: 12
[2026-04-01 09:00:59] Checking for CVMFS
[2026-04-01 09:00:59] No cvmfs_config command found, will try listing directly
[2026-04-01 09:00:59] CVMFS is ok
[2026-04-01 09:00:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 09:00:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-01 09:00:59] Further information can be found at the LHC@home message board.
[2026-04-01 09:00:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 09:00:59] Checking for apptainer binary...
[2026-04-01 09:00:59] which: no apptainer in ((null))
[2026-04-01 09:00:59] apptainer is not installed, using version from CVMFS
[2026-04-01 09:00:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 09:00:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot84/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-04-01 09:00:59] apptainer works
[2026-04-01 09:00:59] Set ATHENA_PROC_NUMBER=12
[2026-04-01 09:00:59] Set ATHENA_CORE_NUMBER=12
[2026-04-01 09:00:59] Starting ATLAS job with PandaID=7065656966
[2026-04-01 09:00:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot84/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 09:30:19]  *** The last 200 lines of the pilot log: ***
[2026-04-01 09:30:19]  filetype=log
[2026-04-01 09:30:19]  guid=93e1b611-1395-4c49-9ea9-00ea1fc3e0e7
[2026-04-01 09:30:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-01 09:30:19]  is_altstaged=None
[2026-04-01 09:30:19]  is_tar=False
[2026-04-01 09:30:19]  lfn=log.48955010._054059.job.log.tgz.1
[2026-04-01 09:30:19]  mtime=0
[2026-04-01 09:30:19]  protocol_id=None
[2026-04-01 09:30:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-01 09:30:19]  replicas=None
[2026-04-01 09:30:19]  scope=mc23_13p6TeV
[2026-04-01 09:30:19]  status=None
[2026-04-01 09:30:19]  status_code=0
[2026-04-01 09:30:19]  storage_token=
[2026-04-01 09:30:19]  surl=/var/lib/boinc/var/slot84/slots/6/PanDA_Pilot-7065656966/log.48955010._054059.job.log.tgz.1
[2026-04-01 09:30:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/86/log.48955010._054059.job.log.tgz.1
[2026-04-01 09:30:19]  workdir=None
[2026-04-01 09:30:19] ]
[2026-04-01 09:30:19] 2026-04-01 07:29:24,942 | INFO     | transferring file log.48955010._054059.job.log.tgz.1 from /var/lib/boinc/var/slot84/slots/6/PanDA_Pilot-7065656966/log.48955010._054059.job.log.tgz.1 to /var/lib/b
[2026-04-01 09:30:19] 2026-04-01 07:29:24,943 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot84/slots/6/PanDA_Pilot-7065656966/log.48955010._054059.job.log.tgz.1 /var/lib/boinc/var/slot84/slots/6/lo
[2026-04-01 09:30:19] 2026-04-01 07:29:24,958 | INFO     | adding to output.list: log.48955010._054059.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/86/log.48955010._054059.job.log.tg
[2026-04-01 09:30:19] 2026-04-01 07:29:24,958 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-01 09:30:19] 2026-04-01 07:29:24,958 | INFO     | summary of transferred files:
[2026-04-01 09:30:19] 2026-04-01 07:29:24,958 | INFO     |  -- lfn=log.48955010._054059.job.log.tgz.1, status_code=0, status=transferred
[2026-04-01 09:30:19] 2026-04-01 07:29:24,959 | INFO     | stage-out finished correctly
[2026-04-01 09:30:19] 2026-04-01 07:29:26,538 | INFO     | time since job start (1695s) is within the limit (345600.0s)
[2026-04-01 09:30:19] 2026-04-01 07:29:26,549 | INFO     | monitor loop #130: job 0:7065656966 is in state 'finished'
[2026-04-01 09:30:19] 2026-04-01 07:29:26,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-01 09:30:19] 2026-04-01 07:29:26,763 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-01 09:30:19] 2026-04-01 07:29:28,145 | INFO     | job 7065656966 has state=finished
[2026-04-01 09:30:19] 2026-04-01 07:29:28,146 | INFO     | preparing for final server update for job 7065656966 in state='finished'
[2026-04-01 09:30:19] 2026-04-01 07:29:28,146 | INFO     | reading metadata from: /var/lib/boinc/var/slot84/slots/6/PanDA_Pilot-7065656966/jobReport.json
[2026-04-01 09:30:19] 2026-04-01 07:29:28,148 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot84/slots/6/workernode_map.json
[2026-04-01 09:30:19] 2026-04-01 07:29:28,148 | INFO     | this job has now completed (state=finished)
[2026-04-01 09:30:19] 2026-04-01 07:29:28,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-01 09:30:19] 2026-04-01 07:29:28,148 | INFO     | log transfer has been attempted: DONE
[2026-04-01 09:30:19] 2026-04-01 07:29:28,148 | INFO     | job 7065656966 has finished - writing final server update
[2026-04-01 09:30:19] 2026-04-01 07:29:28,149 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2652604/.job.ad'
[2026-04-01 09:30:19] 2026-04-01 07:29:28,149 | INFO     | total number of processed events: 400 (read)
[2026-04-01 09:30:19] 2026-04-01 07:29:28,165 | INFO     | using path: /var/lib/boinc/var/slot84/slots/6/PanDA_Pilot-7065656966/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 09:30:19] 2026-04-01 07:29:28,166 | INFO     | extracted standard info from prmon json
[2026-04-01 09:30:19] 2026-04-01 07:29:28,166 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 09:30:19] 2026-04-01 07:29:28,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-01 09:30:19] 2026-04-01 07:29:28,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 09:30:19] 2026-04-01 07:29:28,166 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 09:30:19] 2026-04-01 07:29:28,167 | INFO     | fitting pss+swap vs Time
[2026-04-01 09:30:19] 2026-04-01 07:29:28,167 | INFO     | sum of square deviations: 2865170.0
[2026-04-01 09:30:19] 2026-04-01 07:29:28,167 | INFO     | sum of deviations: 13253470.0
[2026-04-01 09:30:19] 2026-04-01 07:29:28,167 | INFO     | mean x: 1775027809.0
[2026-04-01 09:30:19] 2026-04-01 07:29:28,167 | INFO     | mean y: 2680598.0
[2026-04-01 09:30:19] 2026-04-01 07:29:28,167 | INFO     | intersect: -8208098453.765595
[2026-04-01 09:30:19] 2026-04-01 07:29:28,167 | INFO     | chi2: 0.00014937678496599992
[2026-04-01 09:30:19] 2026-04-01 07:29:28,167 | INFO     | current memory leak: 4.63 B/s (using 21 data points, chi2=0.00)
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | could have reported an average CPU frequency of 3622 MHz (4 samples)
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | ..............................
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | . Timing measurements:
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | . get job = 0 s
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | . initial setup = 4 s
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | . payload setup = 7 s
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | . stage-in = 0 s
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | . payload execution = 1670 s
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | . stage-out = 0 s
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | . log creation = 0 s
[2026-04-01 09:30:19] 2026-04-01 07:29:28,168 | INFO     | ..............................
[2026-04-01 09:30:19] 2026-04-01 07:29:28,213 | INFO     | 
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | job summary report
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | --------------------------------------------------
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | PanDA job id: 7065656966
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | task id: 48955010
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | errors: (none)
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | pilot state: finished 
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | transexitcode: 0
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | exeerrorcode: 0
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | exeerrordiag: 
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | exitcode: 0
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | exitmsg: OK
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | cpuconsumptiontime: 17244 s
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | nevents: 400
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | neventsw: 0
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | pid: 3614643
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | pgrp: 3614643
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | corecount: 12
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | event service: False
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | sizes: {0: 2279878, 1: 2280140, 11: 2280168, 1681: 2305020, 1683: 2314040, 1685: 2314096, 1686: 2314418}
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | --------------------------------------------------
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | 
[2026-04-01 09:30:19] 2026-04-01 07:29:28,214 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot84/slots/6
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,230 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 09:30:19] 2026-04-01 07:29:28,231 | INFO     | job 7065656966 has completed (purged errors)
[2026-04-01 09:30:19] 2026-04-01 07:29:28,231 | INFO     | overall cleanup function is called
[2026-04-01 09:30:19] 2026-04-01 07:29:29,237 | INFO     | --- collectZombieJob: --- 10, [3614643]
[2026-04-01 09:30:19] 2026-04-01 07:29:29,237 | INFO     | zombie collector waiting for pid 3614643
[2026-04-01 09:30:19] 2026-04-01 07:29:29,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 09:30:19] 2026-04-01 07:29:29,237 | INFO     | collected zombie processes
[2026-04-01 09:30:19] 2026-04-01 07:29:29,237 | INFO     | will attempt to kill all subprocesses of pid=3614643
[2026-04-01 09:30:19] 2026-04-01 07:29:29,582 | INFO     | process IDs to be killed: [3614643] (in reverse order)
[2026-04-01 09:30:19] 2026-04-01 07:29:29,737 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 09:30:19] 2026-04-01 07:29:29,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 09:30:19] 2026-04-01 07:29:29,761 | INFO     | did not find any defunct processes belonging to 3614643
[2026-04-01 09:30:19] 2026-04-01 07:29:29,782 | INFO     | did not find any defunct processes belonging to 3614643
[2026-04-01 09:30:19] 2026-04-01 07:29:29,782 | INFO     | ready for new job
[2026-04-01 09:30:19] 2026-04-01 07:29:29,783 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-01 09:30:19] 2026-04-01 07:29:29,783 | INFO     | **************************************
[2026-04-01 09:30:19] 2026-04-01 07:29:29,784 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-01 09:30:19] 2026-04-01 07:29:29,784 | INFO     | **************************************
[2026-04-01 09:30:19] 2026-04-01 07:29:29,784 | INFO     | 
[2026-04-01 09:30:19] 2026-04-01 07:29:29,789 | INFO     | architecture information:
[2026-04-01 09:30:19] 2026-04-01 07:29:29,789 | INFO     | executing command: cat /etc/os-release
[2026-04-01 09:30:19] 2026-04-01 07:29:29,801 | INFO     | cat /etc/os-release:
[2026-04-01 09:30:19] NAME="CentOS Linux"
[2026-04-01 09:30:19] VERSION="7 (Core)"
[2026-04-01 09:30:19] ID="centos"
[2026-04-01 09:30:19] ID_LIKE="rhel fedora"
[2026-04-01 09:30:19] VERSION_ID="7"
[2026-04-01 09:30:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 09:30:19] ANSI_COLOR="0;31"
[2026-04-01 09:30:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 09:30:19] HOME_URL="https://www.centos.org/"
[2026-04-01 09:30:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 09:30:19] 
[2026-04-01 09:30:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 09:30:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 09:30:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 09:30:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 09:30:19] 
[2026-04-01 09:30:19] 2026-04-01 07:29:29,801 | INFO     | **************************************
[2026-04-01 09:30:19] 2026-04-01 07:29:30,304 | INFO     | executing command: df -mP /var/lib/boinc/var/slot84/slots/6
[2026-04-01 09:30:19] 2026-04-01 07:29:30,317 | INFO     | sufficient remaining disk space (274618908672 B)
[2026-04-01 09:30:19] 2026-04-01 07:29:30,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 09:30:19] 2026-04-01 07:29:30,317 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 09:30:19] 2026-04-01 07:29:30,317 | INFO     | update_server=False
[2026-04-01 09:30:19] 2026-04-01 07:29:30,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-01 09:30:19] 2026-04-01 07:29:30,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 09:30:19] 2026-04-01 07:29:30,318 | INFO     | aborting loop
[2026-04-01 09:30:19] 2026-04-01 07:29:30,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 09:30:19] 2026-04-01 07:29:30,525 | INFO     | all data control threads have been joined
[2026-04-01 09:30:19] 2026-04-01 07:29:30,661 | INFO     | all payload control threads have been joined
[2026-04-01 09:30:19] 2026-04-01 07:29:30,665 | INFO     | all job control threads have been joined
[2026-04-01 09:30:19] 2026-04-01 07:29:31,322 | INFO     | [job] retrieve thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:31,323 | INFO     | [job] job monitor thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:31,530 | INFO     | [payload] failed_post thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:31,530 | INFO     | [data] control thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:31,663 | INFO     | [payload] control thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:31,670 | INFO     | [job] control thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:32,015 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:32,123 | INFO     | [job] validate thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:32,335 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:32,385 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:32,519 | INFO     | [data] copytool_out thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:32,538 | INFO     | [data] copytool_in thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:32,564 | INFO     | [payload] validate_post thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:32,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 09:30:19] 2026-04-01 07:29:33,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 09:30:19] 2026-04-01 07:29:34,231 | INFO     | [job] queue monitor thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:36,820 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:29:41,286 | INFO     | job.realtimelogging is not enabled
[2026-04-01 09:30:19] 2026-04-01 07:29:42,292 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 09:30:19] 2026-04-01 07:30:00,069 | INFO     | PID=3602690 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-01 09:30:19] 2026-04-01 07:30:00,069 | INFO     | .. there are 16 such processes running
[2026-04-01 09:30:19] 2026-04-01 07:30:00,070 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 09:30:19] 2026-04-01 07:30:00,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 09:30:19] 2026-04-01 07:30:00,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 09:30:19] 2026-04-01 07:30:13,560 | INFO     | [monitor] cgroup control has ended
[2026-04-01 09:30:19] 2026-04-01 07:30:14,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22915377522496)>', '<ExcThread(monitor, started 22915059808000)>']
[2026-04-01 09:30:19] 2026-04-01 07:30:15,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 09:30:19] 2026-04-01 07:30:15,133 | INFO     | [monitor] control thread has ended
[2026-04-01 09:30:19] 2026-04-01 07:30:19,443 | INFO     | all workflow threads have been joined
[2026-04-01 09:30:19] 2026-04-01 07:30:19,443 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 09:30:19] 2026-04-01 07:30:19,444 | INFO     | traces error code: 0
[2026-04-01 09:30:19] 2026-04-01 07:30:19,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 09:30:19] 2026-04-01 07:30:19,551 [wrapper] ==== pilot stdout END ====
[2026-04-01 09:30:19] 2026-04-01 07:30:19,553 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 09:30:19] 2026-04-01 07:30:19,554 [wrapper] pilotpid: 3602690
[2026-04-01 09:30:19] 2026-04-01 07:30:19,556 [wrapper] Pilot exit status: 0
[2026-04-01 09:30:19] 2026-04-01 07:30:19,563 [wrapper] pandaids: 7065656966
[2026-04-01 09:30:19] 2026-04-01 07:30:19,661 [wrapper] cleanup supervisor_pilot 3672207 3602691
[2026-04-01 09:30:19] 2026-04-01 07:30:19,662 [wrapper] Test setup, not cleaning
[2026-04-01 09:30:19] 2026-04-01 07:30:19,664 [wrapper] apfmon messages muted
[2026-04-01 09:30:19] 2026-04-01 07:30:19,665 [wrapper] ==== wrapper stdout END ====
[2026-04-01 09:30:19] 2026-04-01 07:30:19,666 [wrapper] ==== wrapper stderr END ====
[2026-04-01 09:30:19]  *** Error codes and diagnostics ***
[2026-04-01 09:30:19]     "exeErrorCode": 0,
[2026-04-01 09:30:19]     "exeErrorDiag": "",
[2026-04-01 09:30:19]     "pilotErrorCode": 0,
[2026-04-01 09:30:19]     "pilotErrorDiag": "",
[2026-04-01 09:30:19]  *** Listing of results directory ***
[2026-04-01 09:30:19] total 622692
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc    585013 Mar 28 18:13 pilot3.tar.gz
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc      5118 Mar 28 18:14 queuedata.json
[2026-04-01 09:30:19] -rwx------. 1 boinc boinc     36322 Mar 28 18:14 runpilot2-wrapper.sh
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc       100 Apr  1 09:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 09:30:19] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 09:00 run_atlas
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc       105 Apr  1 09:00 job.xml
[2026-04-01 09:30:19] -rw-r--r--. 2 boinc boinc     15845 Apr  1 09:00 start_atlas.sh
[2026-04-01 09:30:19] drwxrwx--x. 2 boinc boinc      4096 Apr  1 09:00 shared
[2026-04-01 09:30:19] -rw-r--r--. 2 boinc boinc    597540 Apr  1 09:00 input.tar.gz
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc      6710 Apr  1 09:00 init_data.xml
[2026-04-01 09:30:19] -rw-r--r--. 2 boinc boinc 443325464 Apr  1 09:00 EVNT.46701403._001729.pool.root.1
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc         0 Apr  1 09:00 boinc_lockfile
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc      2563 Apr  1 09:00 pandaJob.out
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc   1004639 Apr  1 09:01 agis_schedconf.cvmfs.json
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc   1511579 Apr  1 09:01 agis_ddmendpoints.agis.ALL.json
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc       443 Apr  1 09:01 workernode_map.json
[2026-04-01 09:30:19] drwx------. 5 boinc boinc      4096 Apr  1 09:01 pilot3
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc 189118332 Apr  1 09:28 HITS.48955010._054059.pool.root.1
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc      1031 Apr  1 09:29 memory_monitor_summary.json
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc       530 Apr  1 09:29 boinc_task_state.xml
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc    343390 Apr  1 09:29 log.48955010._054059.job.log.tgz.1
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc      6363 Apr  1 09:29 heartbeat.json
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc      8192 Apr  1 09:29 boinc_mmap_file
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc        27 Apr  1 09:29 wrapper_checkpoint.txt
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc        95 Apr  1 09:30 pilot_heartbeat.json
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc      4902 Apr  1 09:30 pilotlog.txt
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc    286066 Apr  1 09:30 log.48955010._054059.job.log.1
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc       357 Apr  1 09:30 output.list
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc       620 Apr  1 09:30 runtime_log
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc    645120 Apr  1 09:30 result.tar.gz
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc      9206 Apr  1 09:30 runtime_log.err
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc       660 Apr  1 09:30 1vKODmbQmQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmhsKKDmgMUBam.diag
[2026-04-01 09:30:19] -rw-r--r--. 1 boinc boinc     21149 Apr  1 09:30 stderr.txt
[2026-04-01 09:30:19] HITS file was successfully produced:
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc 189118332 Apr  1 09:28 shared/HITS.pool.root.1
[2026-04-01 09:30:19]  *** Contents of shared directory: ***
[2026-04-01 09:30:19] total 618864
[2026-04-01 09:30:19] -rw-r--r--. 2 boinc boinc     15845 Apr  1 09:00 start_atlas.sh
[2026-04-01 09:30:19] -rw-r--r--. 2 boinc boinc    597540 Apr  1 09:00 input.tar.gz
[2026-04-01 09:30:19] -rw-r--r--. 2 boinc boinc 443325464 Apr  1 09:00 ATLAS.root_0
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc 189118332 Apr  1 09:28 HITS.pool.root.1
[2026-04-01 09:30:19] -rw-------. 1 boinc boinc    645120 Apr  1 09:30 result.tar.gz
09:30:21 (3594319): run_atlas exited; CPU time 17283.144994
09:30:21 (3594319): called boinc_finish(0)

</stderr_txt>
]]>

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