Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:16:57 (31457): wrapper (7.7.26015): starting
22:16:57 (31457): wrapper: running run_atlas (--nthreads 8)
[2026-03-28 22:16:57] Arguments: --nthreads 8
[2026-03-28 22:16:57] Threads: 8
[2026-03-28 22:16:57] Checking for CVMFS
[2026-03-28 22:16:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-28 22:16:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-28 22:16:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-28 22:16:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-28 22:16:58] 2.11.0.0 5287 242004 107256 157818 3 13 4001370 4096001 3668 130560 3 22804725 99.704 13481613 373 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-28 22:16:58] CVMFS is ok
[2026-03-28 22:16:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-28 22:16:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-28 22:16:58] Further information can be found at the LHC@home message board.
[2026-03-28 22:16:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-28 22:16:58] Checking for apptainer binary...
[2026-03-28 22:16:58] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-28 22:16:58] apptainer is not installed, using version from CVMFS
[2026-03-28 22:16:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-28 22:16:58] WARNING: Environment variable TMPDIR already has value [/tmp/job_11422719/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node133
[2026-03-28 22:16:58] apptainer works
[2026-03-28 22:16:58] Set ATHENA_PROC_NUMBER=8
[2026-03-28 22:16:58] Set ATHENA_CORE_NUMBER=8
[2026-03-28 22:16:58] Starting ATLAS job with PandaID=7071982829
[2026-03-28 22:16:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11422719/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 00:20:24]  *** The last 200 lines of the pilot log: ***
[2026-03-29 00:20:24] 2026-03-28 23:19:29,815 | INFO     | maximum number of monitored processes: 6
[2026-03-29 00:20:24] 2026-03-28 23:19:30,123 | INFO     | time since job start (7344s) is within the limit (345600.0s)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,301 | INFO     | job 7071982829 has state=finished
[2026-03-29 00:20:24] 2026-03-28 23:19:31,301 | INFO     | preparing for final server update for job 7071982829 in state='finished'
[2026-03-29 00:20:24] 2026-03-28 23:19:31,301 | INFO     | reading metadata from: /tmp/job_11422719/atlas/pilot/slots/0/PanDA_Pilot-7071982829/jobReport.json
[2026-03-29 00:20:24] 2026-03-28 23:19:31,303 | INFO     | added worker_node to metadata from /tmp/job_11422719/atlas/pilot/slots/0/workernode_map.json
[2026-03-29 00:20:24] 2026-03-28 23:19:31,303 | INFO     | this job has now completed (state=finished)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,303 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,303 | INFO     | log transfer has been attempted: DONE
[2026-03-29 00:20:24] 2026-03-28 23:19:31,303 | INFO     | job 7071982829 has finished - writing final server update
[2026-03-29 00:20:24] 2026-03-28 23:19:31,303 | INFO     | total number of processed events: 400 (read)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,325 | INFO     | using path: /tmp/job_11422719/atlas/pilot/slots/0/PanDA_Pilot-7071982829/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,325 | INFO     | extracted standard info from prmon json
[2026-03-29 00:20:24] 2026-03-28 23:19:31,325 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 00:20:24] 2026-03-28 23:19:31,325 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 00:20:24] 2026-03-28 23:19:31,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 00:20:24] 2026-03-28 23:19:31,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 00:20:24] 2026-03-28 23:19:31,327 | INFO     | fitting pss+swap vs Time
[2026-03-29 00:20:24] 2026-03-28 23:19:31,327 | INFO     | sum of square deviations: 535786790.0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,327 | INFO     | sum of deviations: -17839313665.0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,327 | INFO     | mean x: 1774736273.5
[2026-03-29 00:20:24] 2026-03-28 23:19:31,327 | INFO     | mean y: 2655413.5
[2026-03-29 00:20:24] 2026-03-28 23:19:31,327 | INFO     | intersect: 59093468487.89426
[2026-03-29 00:20:24] 2026-03-28 23:19:31,327 | INFO     | chi2: 1.292946160254333
[2026-03-29 00:20:24] 2026-03-28 23:19:31,327 | INFO     | sum of square deviations: 471562330.0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | sum of deviations: -16607491620.999996
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | mean x: 1774736121.0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | mean y: 2658341.052173913
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | intersect: 62505350740.15356
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | chi2: 1.2868047082491594
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | current chi2=1.2868047082491594 (change=0.47499673180247604 %)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | right removable region: 114
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | sum of square deviations: 471562330.0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | sum of deviations: -31344719277.000015
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | mean x: 1774736426.0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,328 | INFO     | mean y: 2686704.0782608697
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | intersect: 117969308557.94073
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | chi2: 0.12260172077610287
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | current chi2=0.12260172077610287 (change=90.51764686381172 %)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | sum of square deviations: 412686807.5
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | sum of deviations: -28756558085.0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | mean x: 1774736578.5
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | mean y: 2679960.8545454545
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | intersect: 123668652746.30495
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | chi2: 0.11835991206135779
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | current chi2=0.11835991206135779 (change=3.459828041477116 %)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,329 | INFO     | left removable region: 20
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | sum of square deviations: 257521107.5
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | sum of deviations: -20230384985.5
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | mean x: 1774736700.5
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | mean y: 2662864.712765957
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | intersect: 139422716807.3241
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | chi2: 0.09990671003203075
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | current memory leak: -78.56 B/s (using 94 data points, chi2=0.10)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | could have reported an average CPU frequency of 2544 MHz (8 samples)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | ..............................
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | . Timing measurements:
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | . get job = 0 s
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | . initial setup = 3 s
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | . payload setup = 3 s
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | . stage-in = 0 s
[2026-03-29 00:20:24] 2026-03-28 23:19:31,330 | INFO     | . payload execution = 7320 s
[2026-03-29 00:20:24] 2026-03-28 23:19:31,331 | INFO     | . stage-out = 0 s
[2026-03-29 00:20:24] 2026-03-28 23:19:31,331 | INFO     | . log creation = 0 s
[2026-03-29 00:20:24] 2026-03-28 23:19:31,331 | INFO     | ..............................
[2026-03-29 00:20:24] 2026-03-28 23:19:31,379 | INFO     | 
[2026-03-29 00:20:24] 2026-03-28 23:19:31,379 | INFO     | job summary report
[2026-03-29 00:20:24] 2026-03-28 23:19:31,379 | INFO     | --------------------------------------------------
[2026-03-29 00:20:24] 2026-03-28 23:19:31,379 | INFO     | PanDA job id: 7071982829
[2026-03-29 00:20:24] 2026-03-28 23:19:31,379 | INFO     | task id: 49182451
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | errors: (none)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | pilot state: finished 
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | transexitcode: 0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | exeerrorcode: 0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | exeerrordiag: 
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | exitcode: 0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | exitmsg: OK
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | cpuconsumptiontime: 54939 s
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | nevents: 400
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | neventsw: 0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | pid: 8265
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | pgrp: 8265
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | corecount: 8
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | event service: False
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | sizes: {0: 2280394, 11: 2280394, 7327: 2307908, 7328: 2316936, 7331: 2316992, 7334: 2317186}
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | --------------------------------------------------
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | 
[2026-03-29 00:20:24] 2026-03-28 23:19:31,380 | INFO     | executing command: ls -lF /tmp/job_11422719/atlas/pilot/slots/0
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,390 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,391 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 00:20:24] 2026-03-28 23:19:31,391 | INFO     | job 7071982829 has completed (purged errors)
[2026-03-29 00:20:24] 2026-03-28 23:19:31,391 | INFO     | overall cleanup function is called
[2026-03-29 00:20:24] 2026-03-28 23:19:32,397 | INFO     | --- collectZombieJob: --- 10, [8265]
[2026-03-29 00:20:24] 2026-03-28 23:19:32,397 | INFO     | zombie collector waiting for pid 8265
[2026-03-29 00:20:24] 2026-03-28 23:19:32,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 00:20:24] 2026-03-28 23:19:32,397 | INFO     | collected zombie processes
[2026-03-29 00:20:24] 2026-03-28 23:19:32,397 | INFO     | will attempt to kill all subprocesses of pid=8265
[2026-03-29 00:20:24] 2026-03-28 23:19:32,551 | INFO     | process IDs to be killed: [8265] (in reverse order)
[2026-03-29 00:20:24] 2026-03-28 23:19:32,595 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 00:20:24] 2026-03-28 23:19:32,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 00:20:24] 2026-03-28 23:19:32,601 | INFO     | did not find any defunct processes belonging to 8265
[2026-03-29 00:20:24] 2026-03-28 23:19:32,606 | INFO     | did not find any defunct processes belonging to 8265
[2026-03-29 00:20:24] 2026-03-28 23:19:32,606 | INFO     | ready for new job
[2026-03-29 00:20:24] 2026-03-28 23:19:32,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 00:20:24] 2026-03-28 23:19:32,607 | INFO     | **************************************
[2026-03-29 00:20:24] 2026-03-28 23:19:32,607 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 00:20:24] 2026-03-28 23:19:32,607 | INFO     | **************************************
[2026-03-29 00:20:24] 2026-03-28 23:19:32,607 | INFO     | 
[2026-03-29 00:20:24] 2026-03-28 23:19:32,622 | INFO     | architecture information:
[2026-03-29 00:20:24] 2026-03-28 23:19:32,622 | INFO     | executing command: cat /etc/os-release
[2026-03-29 00:20:24] 2026-03-28 23:19:32,628 | INFO     | cat /etc/os-release:
[2026-03-29 00:20:24] NAME="CentOS Linux"
[2026-03-29 00:20:24] VERSION="7 (Core)"
[2026-03-29 00:20:24] ID="centos"
[2026-03-29 00:20:24] ID_LIKE="rhel fedora"
[2026-03-29 00:20:24] VERSION_ID="7"
[2026-03-29 00:20:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 00:20:24] ANSI_COLOR="0;31"
[2026-03-29 00:20:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 00:20:24] HOME_URL="https://www.centos.org/"
[2026-03-29 00:20:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 00:20:24] 
[2026-03-29 00:20:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 00:20:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 00:20:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 00:20:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 00:20:24] 
[2026-03-29 00:20:24] 2026-03-28 23:19:32,629 | INFO     | **************************************
[2026-03-29 00:20:24] 2026-03-28 23:19:33,131 | INFO     | executing command: df -mP /tmp/job_11422719/atlas/pilot/slots/0
[2026-03-29 00:20:24] 2026-03-28 23:19:33,138 | INFO     | sufficient remaining disk space (224965689344 B)
[2026-03-29 00:20:24] 2026-03-28 23:19:33,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 00:20:24] 2026-03-28 23:19:33,138 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 00:20:24] 2026-03-28 23:19:33,138 | INFO     | update_server=False
[2026-03-29 00:20:24] 2026-03-28 23:19:33,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 00:20:24] 2026-03-28 23:19:33,138 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 00:20:24] 2026-03-28 23:19:33,223 | INFO     | all data control threads have been joined
[2026-03-29 00:20:24] 2026-03-28 23:19:33,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 00:20:24] 2026-03-28 23:19:33,323 | INFO     | aborting loop
[2026-03-29 00:20:24] 2026-03-28 23:19:33,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 00:20:24] 2026-03-28 23:19:34,143 | INFO     | [job] retrieve thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:34,143 | INFO     | [job] queue monitor thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:34,228 | INFO     | [data] control thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:34,315 | INFO     | all job control threads have been joined
[2026-03-29 00:20:24] 2026-03-28 23:19:34,328 | INFO     | [job] job monitor thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:34,570 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:34,578 | INFO     | all payload control threads have been joined
[2026-03-29 00:20:24] 2026-03-28 23:19:34,666 | INFO     | [payload] failed_post thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:34,774 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:34,812 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 00:20:24] 2026-03-28 23:19:34,812 | INFO     | [job] validate thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:35,084 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:35,177 | INFO     | [data] copytool_in thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:35,320 | INFO     | [job] control thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:35,414 | INFO     | [payload] validate_post thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:35,566 | INFO     | [data] copytool_out thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:35,583 | INFO     | [payload] control thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:38,817 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:19:43,483 | INFO     | job.realtimelogging is not enabled
[2026-03-29 00:20:24] 2026-03-28 23:19:44,488 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 00:20:24] 2026-03-28 23:20:03,393 | INFO     | PID=3439 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-29 00:20:24] 2026-03-28 23:20:03,393 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 00:20:24] 2026-03-28 23:20:03,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 00:20:24] 2026-03-28 23:20:03,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 00:20:24] 2026-03-28 23:20:18,208 | INFO     | [monitor] cgroup control has ended
[2026-03-29 00:20:24] 2026-03-28 23:20:19,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-29 00:20:24] 2026-03-28 23:20:19,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 00:20:24] 2026-03-28 23:20:19,474 | INFO     | [monitor] control thread has ended
[2026-03-29 00:20:24] 2026-03-28 23:20:24,238 | INFO     | all workflow threads have been joined
[2026-03-29 00:20:24] 2026-03-28 23:20:24,239 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 00:20:24] 2026-03-28 23:20:24,239 | INFO     | traces error code: 0
[2026-03-29 00:20:24] 2026-03-28 23:20:24,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 00:20:24] 2026-03-28 23:20:24,299 [wrapper] ==== pilot stdout END ====
[2026-03-29 00:20:24] 2026-03-28 23:20:24,300 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 00:20:24] 2026-03-28 23:20:24,301 [wrapper] pilotpid: 3439
[2026-03-29 00:20:24] 2026-03-28 23:20:24,303 [wrapper] Pilot exit status: 0
[2026-03-29 00:20:24] 2026-03-28 23:20:24,308 [wrapper] pandaids: 7071982829
[2026-03-29 00:20:24] 2026-03-28 23:20:24,342 [wrapper] cleanup supervisor_pilot 20225 3440
[2026-03-29 00:20:24] 2026-03-28 23:20:24,343 [wrapper] Test setup, not cleaning
[2026-03-29 00:20:24] 2026-03-28 23:20:24,344 [wrapper] apfmon messages muted
[2026-03-29 00:20:24] 2026-03-28 23:20:24,345 [wrapper] ==== wrapper stdout END ====
[2026-03-29 00:20:24] 2026-03-28 23:20:24,346 [wrapper] ==== wrapper stderr END ====
[2026-03-29 00:20:24]  *** Error codes and diagnostics ***
[2026-03-29 00:20:24]     "exeErrorCode": 0,
[2026-03-29 00:20:24]     "exeErrorDiag": "",
[2026-03-29 00:20:24]     "pilotErrorCode": 0,
[2026-03-29 00:20:24]     "pilotErrorDiag": "",
[2026-03-29 00:20:24]  *** Listing of results directory ***
[2026-03-29 00:20:24] total 460160
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user    585013 Mar 28 11:35 pilot3.tar.gz
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user      5118 Mar 28 11:36 queuedata.json
[2026-03-29 00:20:24] -rwx------ 1 mf493845 unix-user     36322 Mar 28 11:36 runpilot2-wrapper.sh
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user       100 Mar 28 21:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 00:20:24] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 28 21:16 run_atlas
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user       105 Mar 28 21:16 job.xml
[2026-03-29 00:20:24] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 28 22:16 start_atlas.sh
[2026-03-29 00:20:24] drwxrwx--x 2 mf493845 unix-user       100 Mar 28 22:16 shared
[2026-03-29 00:20:24] -rw-r--r-- 2 mf493845 unix-user    597557 Mar 28 22:16 input.tar.gz
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user      6390 Mar 28 22:16 init_data.xml
[2026-03-29 00:20:24] -rw-r--r-- 2 mf493845 unix-user 235852391 Mar 28 22:16 EVNT.49137078._000002.pool.root.1
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user         0 Mar 28 22:16 boinc_setup_complete
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user      8192 Mar 28 22:16 boinc_mmap_file
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user         0 Mar 28 22:16 boinc_lockfile
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user      2629 Mar 28 22:16 pandaJob.out
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user   1003389 Mar 28 22:17 agis_schedconf.cvmfs.json
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user   1511579 Mar 28 22:17 agis_ddmendpoints.agis.ALL.json
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user       418 Mar 28 22:17 workernode_map.json
[2026-03-29 00:20:24] drwx------ 5 mf493845 unix-user       440 Mar 28 22:17 pilot3
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user 228574192 Mar 29 00:18 HITS.49182451._000867.pool.root.1
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user      1024 Mar 29 00:19 memory_monitor_summary.json
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user    372391 Mar 29 00:19 log.49182451._000867.job.log.tgz.1
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user      6320 Mar 29 00:19 heartbeat.json
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user        95 Mar 29 00:20 pilot_heartbeat.json
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user      4827 Mar 29 00:20 pilotlog.txt
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user   1062261 Mar 29 00:20 log.49182451._000867.job.log.1
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user       357 Mar 29 00:20 output.list
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user       620 Mar 29 00:20 runtime_log
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user   1454080 Mar 29 00:20 result.tar.gz
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user      9219 Mar 29 00:20 runtime_log.err
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user       647 Mar 29 00:20 jUiMDmNDgQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmvrHKDmyFC9Qo.diag
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user     21694 Mar 29 00:20 stderr.txt
[2026-03-29 00:20:24] HITS file was successfully produced:
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user 228574192 Mar 29 00:18 shared/HITS.pool.root.1
[2026-03-29 00:20:24]  *** Contents of shared directory: ***
[2026-03-29 00:20:24] total 455568
[2026-03-29 00:20:24] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 28 22:16 start_atlas.sh
[2026-03-29 00:20:24] -rw-r--r-- 2 mf493845 unix-user    597557 Mar 28 22:16 input.tar.gz
[2026-03-29 00:20:24] -rw-r--r-- 2 mf493845 unix-user 235852391 Mar 28 22:16 ATLAS.root_0
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user 228574192 Mar 29 00:18 HITS.pool.root.1
[2026-03-29 00:20:24] -rw------- 1 mf493845 unix-user   1454080 Mar 29 00:20 result.tar.gz
00:20:26 (31457): run_atlas exited; CPU time 55124.507065
00:20:26 (31457): called boinc_finish(0)

</stderr_txt>
]]>

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