Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:17:31 (29915): wrapper (7.7.26015): starting
12:17:31 (29915): wrapper: running run_atlas (--nthreads 8)
[2026-03-29 12:17:31] Arguments: --nthreads 8
[2026-03-29 12:17:31] Threads: 8
[2026-03-29 12:17:31] Checking for CVMFS
[2026-03-29 12:17:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-29 12:17:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-29 12:17:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-29 12:17:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-29 12:17:32] 2.11.2.0 23466 149027 139304 157839 3 191 22229842 25165824 3516 130560 157 45402667 99.812 34591596 1032 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-29 12:17:32] CVMFS is ok
[2026-03-29 12:17:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-29 12:17:32] Checking for apptainer binary...
[2026-03-29 12:17:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-29 12:17:32] Running /usr/bin/apptainer --version
[2026-03-29 12:17:32] apptainer version 1.3.2-1.el7
[2026-03-29 12:17:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-29 12:17:33] cg-vwn389.simple-grid.lan
[2026-03-29 12:17:33] apptainer works
[2026-03-29 12:17:33] Set ATHENA_PROC_NUMBER=8
[2026-03-29 12:17:33] Set ATHENA_CORE_NUMBER=8
[2026-03-29 12:17:33] Starting ATLAS job with PandaID=7069364780
[2026-03-29 12:17:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-29 17:56:56]  *** The last 200 lines of the pilot log: ***
[2026-03-29 17:56:56] 2026-03-29 15:55:49,400 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-7069364780/memory_monitor_summary.json (trf name=prmon)
[2026-03-29 17:56:56] 2026-03-29 15:55:49,401 | INFO     | extracted standard info from prmon json
[2026-03-29 17:56:56] 2026-03-29 15:55:49,401 | INFO     | extracted standard memory fields from prmon json
[2026-03-29 17:56:56] 2026-03-29 15:55:49,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-29 17:56:56] 2026-03-29 15:55:49,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-29 17:56:56] 2026-03-29 15:55:49,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-29 17:56:56] 2026-03-29 15:55:49,409 | INFO     | fitting pss+swap vs Time
[2026-03-29 17:56:56] 2026-03-29 15:55:49,409 | INFO     | sum of square deviations: 11347200663.0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,413 | INFO     | sum of deviations: -48122734903.500015
[2026-03-29 17:56:56] 2026-03-29 15:55:49,414 | INFO     | mean x: 1774789624.5
[2026-03-29 17:56:56] 2026-03-29 15:55:49,414 | INFO     | mean y: 2507405.737951807
[2026-03-29 17:56:56] 2026-03-29 15:55:49,414 | INFO     | intersect: 7529273975.380649
[2026-03-29 17:56:56] 2026-03-29 15:55:49,414 | INFO     | chi2: 2.6136480582090362
[2026-03-29 17:56:56] 2026-03-29 15:55:49,415 | INFO     | sum of square deviations: 10842205148.0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,418 | INFO     | sum of deviations: -25241426984.999985
[2026-03-29 17:56:56] 2026-03-29 15:55:49,419 | INFO     | mean x: 1774789472.0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,419 | INFO     | mean y: 2514234.4770642202
[2026-03-29 17:56:56] 2026-03-29 15:55:49,419 | INFO     | intersect: 4134350725.276018
[2026-03-29 17:56:56] 2026-03-29 15:55:49,420 | INFO     | chi2: 1.8435337511493224
[2026-03-29 17:56:56] 2026-03-29 15:55:49,420 | INFO     | current chi2=1.8435337511493224 (change=29.465111212694158 %)
[2026-03-29 17:56:56] 2026-03-29 15:55:49,420 | INFO     | sum of square deviations: 10352419220.5
[2026-03-29 17:56:56] 2026-03-29 15:55:49,424 | INFO     | sum of deviations: -24698041455.5
[2026-03-29 17:56:56] 2026-03-29 15:55:49,424 | INFO     | mean x: 1774789319.5
[2026-03-29 17:56:56] 2026-03-29 15:55:49,424 | INFO     | mean y: 2514403.6801242237
[2026-03-29 17:56:56] 2026-03-29 15:55:49,425 | INFO     | intersect: 4236676414.912176
[2026-03-29 17:56:56] 2026-03-29 15:55:49,425 | INFO     | chi2: 1.8428924434303058
[2026-03-29 17:56:56] 2026-03-29 15:55:49,425 | INFO     | current chi2=1.8428924434303058 (change=0.03478687160551255 %)
[2026-03-29 17:56:56] 2026-03-29 15:55:49,425 | INFO     | right removable region: 321
[2026-03-29 17:56:56] 2026-03-29 15:55:49,426 | INFO     | sum of square deviations: 10842205148.0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,430 | INFO     | sum of deviations: -102206630574.0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,430 | INFO     | mean x: 1774789777.0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,430 | INFO     | mean y: 2523634.351681957
[2026-03-29 17:56:56] 2026-03-29 15:55:49,431 | INFO     | intersect: 16733002407.64918
[2026-03-29 17:56:56] 2026-03-29 15:55:49,431 | INFO     | chi2: 1.0537671311379078
[2026-03-29 17:56:56] 2026-03-29 15:55:49,431 | INFO     | current chi2=1.0537671311379078 (change=59.68213364350263 %)
[2026-03-29 17:56:56] 2026-03-29 15:55:49,432 | INFO     | sum of square deviations: 10352419220.5
[2026-03-29 17:56:56] 2026-03-29 15:55:49,435 | INFO     | sum of deviations: -99318503163.0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,435 | INFO     | mean x: 1774789929.5
[2026-03-29 17:56:56] 2026-03-29 15:55:49,436 | INFO     | mean y: 2522718.6708074533
[2026-03-29 17:56:56] 2026-03-29 15:55:49,436 | INFO     | intersect: 17029410393.16288
[2026-03-29 17:56:56] 2026-03-29 15:55:49,436 | INFO     | chi2: 1.0394018484164889
[2026-03-29 17:56:56] 2026-03-29 15:55:49,436 | INFO     | current chi2=1.0394018484164889 (change=1.3632312393257693 %)
[2026-03-29 17:56:56] 2026-03-29 15:55:49,436 | INFO     | left removable region: 20
[2026-03-29 17:56:56] 2026-03-29 15:55:49,437 | INFO     | sum of square deviations: 8456158550.0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,440 | INFO     | sum of deviations: -55173257064.0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,440 | INFO     | mean x: 1774789899.0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,440 | INFO     | mean y: 2523628.926910299
[2026-03-29 17:56:56] 2026-03-29 15:55:49,440 | INFO     | intersect: 11582360827.239328
[2026-03-29 17:56:56] 2026-03-29 15:55:49,441 | INFO     | chi2: 0.22147302744343814
[2026-03-29 17:56:56] 2026-03-29 15:55:49,441 | INFO     | current memory leak: -6.52 B/s (using 301 data points, chi2=0.22)
[2026-03-29 17:56:56] 2026-03-29 15:55:49,442 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-03-29 17:56:56] 2026-03-29 15:55:49,442 | INFO     | ..............................
[2026-03-29 17:56:56] 2026-03-29 15:55:49,442 | INFO     | . Timing measurements:
[2026-03-29 17:56:56] 2026-03-29 15:55:49,442 | INFO     | . get job = 0 s
[2026-03-29 17:56:56] 2026-03-29 15:55:49,442 | INFO     | . initial setup = 15 s
[2026-03-29 17:56:56] 2026-03-29 15:55:49,442 | INFO     | . payload setup = 25 s
[2026-03-29 17:56:56] 2026-03-29 15:55:49,442 | INFO     | . stage-in = 0 s
[2026-03-29 17:56:56] 2026-03-29 15:55:49,442 | INFO     | . payload execution = 20223 s
[2026-03-29 17:56:56] 2026-03-29 15:55:49,442 | INFO     | . stage-out = 3 s
[2026-03-29 17:56:56] 2026-03-29 15:55:49,443 | INFO     | . log creation = 1 s
[2026-03-29 17:56:56] 2026-03-29 15:55:49,443 | INFO     | ..............................
[2026-03-29 17:56:56] 2026-03-29 15:55:49,600 | INFO     | time since job start (20260s) is within the limit (345600.0s)
[2026-03-29 17:56:56] 2026-03-29 15:55:49,641 | INFO     | 
[2026-03-29 17:56:56] 2026-03-29 15:55:49,641 | INFO     | job summary report
[2026-03-29 17:56:56] 2026-03-29 15:55:49,641 | INFO     | --------------------------------------------------
[2026-03-29 17:56:56] 2026-03-29 15:55:49,641 | INFO     | PanDA job id: 7069364780
[2026-03-29 17:56:56] 2026-03-29 15:55:49,641 | INFO     | task id: 48967094
[2026-03-29 17:56:56] 2026-03-29 15:55:49,641 | INFO     | errors: (none)
[2026-03-29 17:56:56] 2026-03-29 15:55:49,641 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-29 17:56:56] 2026-03-29 15:55:49,641 | INFO     | pilot state: finished 
[2026-03-29 17:56:56] 2026-03-29 15:55:49,642 | INFO     | transexitcode: 0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,642 | INFO     | exeerrorcode: 0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,642 | INFO     | exeerrordiag: 
[2026-03-29 17:56:56] 2026-03-29 15:55:49,642 | INFO     | exitcode: 0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,642 | INFO     | exitmsg: OK
[2026-03-29 17:56:56] 2026-03-29 15:55:49,642 | INFO     | cpuconsumptiontime: 77470 s
[2026-03-29 17:56:56] 2026-03-29 15:55:49,642 | INFO     | nevents: 400
[2026-03-29 17:56:56] 2026-03-29 15:55:49,642 | INFO     | neventsw: 0
[2026-03-29 17:56:56] 2026-03-29 15:55:49,642 | INFO     | pid: 13120
[2026-03-29 17:56:56] 2026-03-29 15:55:49,642 | INFO     | pgrp: 13120
[2026-03-29 17:56:56] 2026-03-29 15:55:49,643 | INFO     | corecount: 8
[2026-03-29 17:56:56] 2026-03-29 15:55:49,643 | INFO     | event service: False
[2026-03-29 17:56:56] 2026-03-29 15:55:49,643 | INFO     | sizes: {0: 2279692, 1: 2280209, 2: 2280209, 20253: 2313547, 20256: 2322547, 20257: 2322603, 20258: 2322925}
[2026-03-29 17:56:56] 2026-03-29 15:55:49,643 | INFO     | --------------------------------------------------
[2026-03-29 17:56:56] 2026-03-29 15:55:49,643 | INFO     | 
[2026-03-29 17:56:56] 2026-03-29 15:55:49,643 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-03-29 17:56:56] 2026-03-29 15:55:50,157 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,158 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,158 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,158 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,159 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,159 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,160 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-29 17:56:56] 2026-03-29 15:55:50,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,160 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-29 17:56:56] 2026-03-29 15:55:50,160 | INFO     | job 7069364780 has completed (purged errors)
[2026-03-29 17:56:56] 2026-03-29 15:55:50,161 | INFO     | overall cleanup function is called
[2026-03-29 17:56:56] 2026-03-29 15:55:50,806 | INFO     | PID=2962 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-29 17:56:56] 2026-03-29 15:55:50,806 | INFO     | .. there are 9 such processes running
[2026-03-29 17:56:56] 2026-03-29 15:55:51,171 | INFO     | --- collectZombieJob: --- 10, [13120]
[2026-03-29 17:56:56] 2026-03-29 15:55:51,171 | INFO     | zombie collector waiting for pid 13120
[2026-03-29 17:56:56] 2026-03-29 15:55:51,171 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-29 17:56:56] 2026-03-29 15:55:51,171 | INFO     | collected zombie processes
[2026-03-29 17:56:56] 2026-03-29 15:55:51,172 | INFO     | will attempt to kill all subprocesses of pid=13120
[2026-03-29 17:56:56] 2026-03-29 15:55:51,300 | INFO     | process IDs to be killed: [13120] (in reverse order)
[2026-03-29 17:56:56] 2026-03-29 15:55:52,186 | WARNING  | found no corresponding commands to process id(s)
[2026-03-29 17:56:56] 2026-03-29 15:55:52,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-29 17:56:56] 2026-03-29 15:55:52,189 | INFO     | did not find any defunct processes belonging to 13120
[2026-03-29 17:56:56] 2026-03-29 15:55:52,192 | INFO     | did not find any defunct processes belonging to 13120
[2026-03-29 17:56:56] 2026-03-29 15:55:52,192 | INFO     | ready for new job
[2026-03-29 17:56:56] 2026-03-29 15:55:52,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-29 17:56:56] 2026-03-29 15:55:52,195 | INFO     | **************************************
[2026-03-29 17:56:56] 2026-03-29 15:55:52,195 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-29 17:56:56] 2026-03-29 15:55:52,195 | INFO     | **************************************
[2026-03-29 17:56:56] 2026-03-29 15:55:52,195 | INFO     | 
[2026-03-29 17:56:56] 2026-03-29 15:55:52,196 | INFO     | pilot is running in a VM
[2026-03-29 17:56:56] 2026-03-29 15:55:52,196 | INFO     | architecture information:
[2026-03-29 17:56:56] 2026-03-29 15:55:52,206 | INFO     | executing command: cat /etc/os-release
[2026-03-29 17:56:56] 2026-03-29 15:55:52,437 | INFO     | cat /etc/os-release:
[2026-03-29 17:56:56] NAME="CentOS Linux"
[2026-03-29 17:56:56] VERSION="7 (Core)"
[2026-03-29 17:56:56] ID="centos"
[2026-03-29 17:56:56] ID_LIKE="rhel fedora"
[2026-03-29 17:56:56] VERSION_ID="7"
[2026-03-29 17:56:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-29 17:56:56] ANSI_COLOR="0;31"
[2026-03-29 17:56:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-29 17:56:56] HOME_URL="https://www.centos.org/"
[2026-03-29 17:56:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-29 17:56:56] 
[2026-03-29 17:56:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-29 17:56:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-29 17:56:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-29 17:56:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-29 17:56:56] 
[2026-03-29 17:56:56] 2026-03-29 15:55:52,438 | INFO     | **************************************
[2026-03-29 17:56:56] 2026-03-29 15:55:52,941 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-03-29 17:56:56] 2026-03-29 15:55:53,219 | INFO     | sufficient remaining disk space (496509124608 B)
[2026-03-29 17:56:56] 2026-03-29 15:55:53,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-29 17:56:56] 2026-03-29 15:55:53,219 | INFO     | current server update state: UPDATING_FINAL
[2026-03-29 17:56:56] 2026-03-29 15:55:53,219 | INFO     | update_server=False
[2026-03-29 17:56:56] 2026-03-29 15:55:53,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-29 17:56:56] 2026-03-29 15:55:53,235 | INFO     | all job control threads have been joined
[2026-03-29 17:56:56] 2026-03-29 15:55:53,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-29 17:56:56] 2026-03-29 15:55:53,530 | INFO     | all data control threads have been joined
[2026-03-29 17:56:56] 2026-03-29 15:55:53,537 | INFO     | all payload control threads have been joined
[2026-03-29 17:56:56] 2026-03-29 15:55:53,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-29 17:56:56] 2026-03-29 15:55:53,975 | INFO     | aborting loop
[2026-03-29 17:56:56] 2026-03-29 15:55:54,225 | INFO     | [job] retrieve thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:54,241 | INFO     | [job] control thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:54,336 | INFO     | [payload] failed_post thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:54,341 | INFO     | [job] validate thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:54,536 | INFO     | [data] control thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:54,543 | INFO     | [payload] control thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:54,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-29 17:56:56] 2026-03-29 15:55:54,667 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:54,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-29 17:56:56] 2026-03-29 15:55:54,981 | INFO     | [job] job monitor thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:54,997 | INFO     | [payload] validate_post thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:55,187 | INFO     | [job] create_data_payload thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:55,289 | INFO     | [payload] validate_pre thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:55,406 | INFO     | [data] copytool_in thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:55,534 | INFO     | [data] copytool_out thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:55,662 | INFO     | [job] queue monitor thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:55,711 | INFO     | [payload] execute_payloads thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:55:58,694 | INFO     | [data] queue_monitor thread has finished
[2026-03-29 17:56:56] 2026-03-29 15:56:23,035 | INFO     | PID=2962 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-29 17:56:56] 2026-03-29 15:56:23,035 | INFO     | .. there are 9 such processes running
[2026-03-29 17:56:56] 2026-03-29 15:56:23,036 | INFO     | found 0 job(s) in 20 queues
[2026-03-29 17:56:56] 2026-03-29 15:56:23,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-29 17:56:56] 2026-03-29 15:56:23,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-29 17:56:56] 2026-03-29 15:56:44,483 | INFO     | [monitor] cgroup control has ended
[2026-03-29 17:56:56] 2026-03-29 15:56:46,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607531353920)>', '<ExcThread(monitor, started 140606953219840)>']
[2026-03-29 17:56:56] 2026-03-29 15:56:46,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-29 17:56:56] 2026-03-29 15:56:46,177 | INFO     | [monitor] control thread has ended
[2026-03-29 17:56:56] 2026-03-29 15:56:51,094 | INFO     | all workflow threads have been joined
[2026-03-29 17:56:56] 2026-03-29 15:56:51,094 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-29 17:56:56] 2026-03-29 15:56:51,095 | INFO     | traces error code: 0
[2026-03-29 17:56:56] 2026-03-29 15:56:51,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-29 17:56:56] 2026-03-29 15:56:51,595 [wrapper] ==== pilot stdout END ====
[2026-03-29 17:56:56] 2026-03-29 15:56:51,685 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-29 17:56:56] 2026-03-29 15:56:51,756 [wrapper] pilotpid: 2962
[2026-03-29 17:56:56] 2026-03-29 15:56:51,805 [wrapper] Pilot exit status: 0
[2026-03-29 17:56:56] 2026-03-29 15:56:52,267 [wrapper] pandaids: 7069364780
[2026-03-29 17:56:56] 2026-03-29 15:56:53,195 [wrapper] cleanup supervisor_pilot 18582 2963
[2026-03-29 17:56:56] 2026-03-29 15:56:53,294 [wrapper] Test setup, not cleaning
[2026-03-29 17:56:56] 2026-03-29 15:56:53,358 [wrapper] apfmon messages muted
[2026-03-29 17:56:56] 2026-03-29 15:56:53,420 [wrapper] ==== wrapper stdout END ====
[2026-03-29 17:56:56] 2026-03-29 15:56:53,470 [wrapper] ==== wrapper stderr END ====
[2026-03-29 17:56:56]  *** Error codes and diagnostics ***
[2026-03-29 17:56:56]     "exeErrorCode": 0,
[2026-03-29 17:56:56]     "exeErrorDiag": "",
[2026-03-29 17:56:56]     "pilotErrorCode": 0,
[2026-03-29 17:56:56]     "pilotErrorDiag": "",
[2026-03-29 17:56:56]  *** Listing of results directory ***
[2026-03-29 17:56:56] total 429808
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc    585013 Mar 28 18:13 pilot3.tar.gz
[2026-03-29 17:56:56] -rwx------. 1 boinc boinc     36322 Mar 28 18:16 runpilot2-wrapper.sh
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc      5118 Mar 28 18:18 queuedata.json
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc       100 Mar 29 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-29 17:56:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar 29 12:17 run_atlas
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc       105 Mar 29 12:17 job.xml
[2026-03-29 17:56:56] -rw-r--r--. 2 boinc boinc 221882086 Mar 29 12:17 EVNT.48967092._000528.pool.root.1
[2026-03-29 17:56:56] -rw-r--r--. 2 boinc boinc    597545 Mar 29 12:17 input.tar.gz
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc      6391 Mar 29 12:17 init_data.xml
[2026-03-29 17:56:56] -rw-r--r--. 2 boinc boinc     15845 Mar 29 12:17 start_atlas.sh
[2026-03-29 17:56:56] drwxrwx--x. 2 boinc boinc        68 Mar 29 12:17 shared
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc         0 Mar 29 12:17 boinc_lockfile
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc      2601 Mar 29 12:17 pandaJob.out
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc   1003381 Mar 29 12:17 agis_schedconf.cvmfs.json
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc       415 Mar 29 12:18 workernode_map.json
[2026-03-29 17:56:56] drwx------. 5 boinc boinc      4096 Mar 29 12:18 pilot3
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc 207661295 Mar 29 17:54 HITS.48967094._016955.pool.root.1
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc       530 Mar 29 17:54 boinc_task_state.xml
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc      1028 Mar 29 17:55 memory_monitor_summary.json
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc   1511579 Mar 29 17:55 agis_ddmendpoints.agis.ALL.json
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc    533881 Mar 29 17:55 log.48967094._016955.job.log.tgz.1
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc      6314 Mar 29 17:55 heartbeat.json
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc        95 Mar 29 17:56 pilot_heartbeat.json
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc        28 Mar 29 17:56 wrapper_checkpoint.txt
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc      8192 Mar 29 17:56 boinc_mmap_file
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc      4880 Mar 29 17:56 pilotlog.txt
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc   2796191 Mar 29 17:56 log.48967094._016955.job.log.1
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc       357 Mar 29 17:56 output.list
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc       620 Mar 29 17:56 runtime_log
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc   3348480 Mar 29 17:56 result.tar.gz
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc       657 Mar 29 17:56 saOODmJSmQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm5VIKDmGJ0xWm.diag
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc      8832 Mar 29 17:56 runtime_log.err
[2026-03-29 17:56:56] -rw-r--r--. 1 boinc boinc     20825 Mar 29 17:56 stderr.txt
[2026-03-29 17:56:56] HITS file was successfully produced:
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc 207661295 Mar 29 17:54 shared/HITS.pool.root.1
[2026-03-29 17:56:56]  *** Contents of shared directory: ***
[2026-03-29 17:56:56] total 423352
[2026-03-29 17:56:56] -rw-r--r--. 2 boinc boinc 221882086 Mar 29 12:17 ATLAS.root_0
[2026-03-29 17:56:56] -rw-r--r--. 2 boinc boinc    597545 Mar 29 12:17 input.tar.gz
[2026-03-29 17:56:56] -rw-r--r--. 2 boinc boinc     15845 Mar 29 12:17 start_atlas.sh
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc 207661295 Mar 29 17:54 HITS.pool.root.1
[2026-03-29 17:56:56] -rw-------. 1 boinc boinc   3348480 Mar 29 17:56 result.tar.gz
17:56:57 (29915): run_atlas exited; CPU time 77779.671700
17:56:57 (29915): called boinc_finish(0)

</stderr_txt>
]]>

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